Metagenome / Metatranscriptome Family F032968

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F032968
Family Type	Metagenome / Metatranscriptome
Number of Sequences	178
Average Sequence Length	53 residues
Representative Sequence	MPEKSHATTAASVHRRSHGMDEAMKAGIGATVCSVLILAIVLLAMHTLPVSIG
Number of Associated Samples	107
Number of Associated Scaffolds	178

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	81.82 %
% of genes near scaffold ends (potentially truncated)	19.10 %
% of genes from short scaffolds (< 2000 bps)	88.76 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (53.371 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (28.090 % of family members)
Environment Ontology (ENVO)	Unclassified (42.135 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (69.663 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 54.32% β-sheet: 0.00% Coil/Unstructured: 45.68%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 178 Family Scaffolds
PF01734	Patatin	8.43
PF00174	Oxidored_molyb	2.25
PF06568	DUF1127	2.25
PF03466	LysR_substrate	2.25
PF01382	Avidin	1.69
PF13602	ADH_zinc_N_2	1.69
PF02518	HATPase_c	1.69
PF01794	Ferric_reduct	1.12
PF02852	Pyr_redox_dim	1.12
PF07345	DUF1476	1.12
PF03401	TctC	0.56
PF02627	CMD	0.56
PF06055	ExoD	0.56
PF01152	Bac_globin	0.56
PF04392	ABC_sub_bind	0.56
PF00496	SBP_bac_5	0.56
PF00571	CBS	0.56
PF01042	Ribonuc_L-PSP	0.56
PF13545	HTH_Crp_2	0.56
PF00042	Globin	0.56
PF01740	STAS	0.56
PF13517	FG-GAP_3	0.56
PF00528	BPD_transp_1	0.56
PF07592	DDE_Tnp_ISAZ013	0.56
PF00313	CSD	0.56
PF04828	GFA	0.56
PF10282	Lactonase	0.56
PF08240	ADH_N	0.56
PF13343	SBP_bac_6	0.56

COG ID	Name	Functional Category	% Frequency in 178 Family Scaffolds
COG1752	Predicted acylesterase/phospholipase RssA, containd patatin domain	General function prediction only [R]	8.43
COG3621	Patatin-like phospholipase/acyl hydrolase, includes sporulation protein CotR	General function prediction only [R]	8.43
COG4667	Predicted phospholipase, patatin/cPLA2 family	Lipid transport and metabolism [I]	8.43
COG2041	Molybdopterin-dependent catalytic subunit of periplasmic DMSO/TMAO and protein-methionine-sulfoxide reductases	Energy production and conversion [C]	2.25
COG3915	Uncharacterized conserved protein	Function unknown [S]	2.25
COG5457	Uncharacterized conserved protein YjiS, DUF1127 family	Function unknown [S]	2.25
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.56
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	0.56
COG1017	Hemoglobin-like flavoprotein	Energy production and conversion [C]	0.56
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	0.56
COG2346	Truncated hemoglobin YjbI	Inorganic ion transport and metabolism [P]	0.56
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.56
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.56
COG3791	Uncharacterized conserved protein	Function unknown [S]	0.56
COG3932	Exopolysaccharide synthesis protein ExoD	Cell wall/membrane/envelope biogenesis [M]	0.56

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	53.37 %
Unclassified	root	N/A	46.63 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	53.37 %
Unclassified	root	N/A	46.63 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	53.37 %
Unclassified	root	N/A	46.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.63 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	43.82 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	2.81 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.63 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	39.33 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	2.81 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.63 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	16.85 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	10.67 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2.81 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.56 %
Ktedonobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.63 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	10.11 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	9.55 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	2.81 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.56 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.56 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.56 %
unclassified Ktedonobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → unclassified Ktedonobacteria	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.63 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	10.11 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	8.99 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2.81 %
Ktedonobacteria bacterium brp13	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → unclassified Ktedonobacteria → Ktedonobacteria bacterium brp13	0.56 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.56 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.56 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.63 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	10.11 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2.81 %
Bradyrhizobium icense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium icense	1.69 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.56 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	0.56 %
Mesorhizobium metallidurans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium metallidurans	0.56 %
Ktedonobacteria bacterium brp13	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → unclassified Ktedonobacteria → Ktedonobacteria bacterium brp13	0.56 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.56 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.63 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	10.11 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2.81 %
Bradyrhizobium icense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium icense	1.69 %
Bradyrhizobium sp. NAS80.1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. NAS80.1	0.56 %
Mesorhizobium metallidurans STM 2683	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium metallidurans → Mesorhizobium metallidurans STM 2683	0.56 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	0.56 %
Ktedonobacteria bacterium brp13	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → unclassified Ktedonobacteria → Ktedonobacteria bacterium brp13	0.56 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.56 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.56 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_100353500	Not Available	746	Open in IMG/M
3300000550\|F24TB_11253415	Not Available	586	Open in IMG/M
3300000550\|F24TB_12784647	Not Available	593	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10018797	Not Available	1899	Open in IMG/M
3300000956\|JGI10216J12902_100603053	Not Available	534	Open in IMG/M
3300000956\|JGI10216J12902_109539857	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300003572\|Ga0007424J51698_1014753	Not Available	509	Open in IMG/M
3300004152\|Ga0062386_101199000	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium metallidurans → Mesorhizobium metallidurans STM 2683	631	Open in IMG/M
3300004152\|Ga0062386_101662288	Not Available	533	Open in IMG/M
3300004267\|Ga0066396_10083565	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	567	Open in IMG/M
3300004633\|Ga0066395_10122567	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1285	Open in IMG/M
3300004633\|Ga0066395_10179446	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1094	Open in IMG/M
3300005172\|Ga0066683_10081351	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1952	Open in IMG/M
3300005332\|Ga0066388_100105729	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3294	Open in IMG/M
3300005332\|Ga0066388_101526062	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1170	Open in IMG/M
3300005332\|Ga0066388_101527911	Not Available	1170	Open in IMG/M
3300005332\|Ga0066388_101861031	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1073	Open in IMG/M
3300005332\|Ga0066388_104128432	Not Available	740	Open in IMG/M
3300005332\|Ga0066388_107565497	Not Available	545	Open in IMG/M
3300005447\|Ga0066689_10721731	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	623	Open in IMG/M
3300005451\|Ga0066681_10283282	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1011	Open in IMG/M
3300005540\|Ga0066697_10424420	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	770	Open in IMG/M
3300005553\|Ga0066695_10099863	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1778	Open in IMG/M
3300005556\|Ga0066707_10047953	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2464	Open in IMG/M
3300005576\|Ga0066708_10375660	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	912	Open in IMG/M
3300005713\|Ga0066905_100241485	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1381	Open in IMG/M
3300005713\|Ga0066905_101201065	Not Available	678	Open in IMG/M
3300005764\|Ga0066903_100185614	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3077	Open in IMG/M
3300005764\|Ga0066903_100675482	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1813	Open in IMG/M
3300005764\|Ga0066903_100831651	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1658	Open in IMG/M
3300005764\|Ga0066903_105157239	Not Available	692	Open in IMG/M
3300005764\|Ga0066903_106175869	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → unclassified Ktedonobacteria → Ktedonobacteria bacterium brp13	626	Open in IMG/M
3300005764\|Ga0066903_106388743	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	615	Open in IMG/M
3300005981\|Ga0081538_10209753	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	787	Open in IMG/M
3300006057\|Ga0075026_100588482	Not Available	652	Open in IMG/M
3300006796\|Ga0066665_10106655	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2064	Open in IMG/M
3300006796\|Ga0066665_11394140	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	542	Open in IMG/M
3300006797\|Ga0066659_10824393	Not Available	770	Open in IMG/M
3300009012\|Ga0066710_100252285	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2554	Open in IMG/M
3300009038\|Ga0099829_10540304	Not Available	968	Open in IMG/M
3300009090\|Ga0099827_10936358	Not Available	751	Open in IMG/M
3300009090\|Ga0099827_12009237	Not Available	502	Open in IMG/M
3300009143\|Ga0099792_10491353	Not Available	767	Open in IMG/M
3300009147\|Ga0114129_10224212	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2534	Open in IMG/M
3300009792\|Ga0126374_10007269	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4088	Open in IMG/M
3300009792\|Ga0126374_11876738	Not Available	503	Open in IMG/M
3300010046\|Ga0126384_11498923	Not Available	632	Open in IMG/M
3300010047\|Ga0126382_10225873	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1353	Open in IMG/M
3300010047\|Ga0126382_10674927	Not Available	863	Open in IMG/M
3300010048\|Ga0126373_12480420	Not Available	578	Open in IMG/M
3300010159\|Ga0099796_10317004	Not Available	664	Open in IMG/M
3300010159\|Ga0099796_10488438	Not Available	551	Open in IMG/M
3300010359\|Ga0126376_10055075	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2833	Open in IMG/M
3300010376\|Ga0126381_101911170	All Organisms → cellular organisms → Bacteria → Proteobacteria	856	Open in IMG/M
3300010868\|Ga0124844_1001147	All Organisms → cellular organisms → Bacteria	3255	Open in IMG/M
3300011269\|Ga0137392_10909022	Not Available	724	Open in IMG/M
3300012022\|Ga0120191_10015562	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1019	Open in IMG/M
3300012096\|Ga0137389_10439339	Not Available	1117	Open in IMG/M
3300012096\|Ga0137389_11162979	Not Available	661	Open in IMG/M
3300012189\|Ga0137388_10572103	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1050	Open in IMG/M
3300012204\|Ga0137374_10021060	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	7387	Open in IMG/M
3300012204\|Ga0137374_10193758	All Organisms → cellular organisms → Bacteria	1758	Open in IMG/M
3300012207\|Ga0137381_11094781	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	686	Open in IMG/M
3300012209\|Ga0137379_11788023	Not Available	509	Open in IMG/M
3300012210\|Ga0137378_11084429	All Organisms → cellular organisms → Bacteria → Proteobacteria	715	Open in IMG/M
3300012211\|Ga0137377_11250187	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	672	Open in IMG/M
3300012358\|Ga0137368_10683849	Not Available	646	Open in IMG/M
3300012361\|Ga0137360_11890801	Not Available	503	Open in IMG/M
3300012362\|Ga0137361_10286630	Not Available	1506	Open in IMG/M
3300012363\|Ga0137390_10449727	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1264	Open in IMG/M
3300012469\|Ga0150984_107743570	Not Available	506	Open in IMG/M
3300012948\|Ga0126375_10513760	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	896	Open in IMG/M
3300012948\|Ga0126375_10934459	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium icense	700	Open in IMG/M
3300012971\|Ga0126369_11733651	Not Available	714	Open in IMG/M
3300015372\|Ga0132256_102447404	Not Available	624	Open in IMG/M
3300016270\|Ga0182036_10674765	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	834	Open in IMG/M
3300016294\|Ga0182041_10409629	All Organisms → cellular organisms → Bacteria → Proteobacteria	1156	Open in IMG/M
3300016294\|Ga0182041_10780664	Not Available	852	Open in IMG/M
3300016294\|Ga0182041_10791755	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	846	Open in IMG/M
3300016294\|Ga0182041_11786512	Not Available	570	Open in IMG/M
3300016319\|Ga0182033_11054366	Not Available	725	Open in IMG/M
3300016319\|Ga0182033_12132912	Not Available	511	Open in IMG/M
3300016357\|Ga0182032_11053248	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	696	Open in IMG/M
3300016371\|Ga0182034_10740073	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	838	Open in IMG/M
3300016371\|Ga0182034_10765657	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	824	Open in IMG/M
3300016371\|Ga0182034_10884722	Not Available	767	Open in IMG/M
3300016387\|Ga0182040_11553924	All Organisms → cellular organisms → Bacteria → Proteobacteria	563	Open in IMG/M
3300016404\|Ga0182037_10631398	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	911	Open in IMG/M
3300016404\|Ga0182037_10820424	Not Available	803	Open in IMG/M
3300016404\|Ga0182037_10910904	Not Available	763	Open in IMG/M
3300016404\|Ga0182037_11649043	Not Available	571	Open in IMG/M
3300016404\|Ga0182037_12113929	Not Available	506	Open in IMG/M
3300016422\|Ga0182039_10137462	Not Available	1871	Open in IMG/M
3300016422\|Ga0182039_11294732	Not Available	660	Open in IMG/M
3300016422\|Ga0182039_11448952	Not Available	624	Open in IMG/M
3300016422\|Ga0182039_12009473	Not Available	532	Open in IMG/M
3300018027\|Ga0184605_10258707	Not Available	791	Open in IMG/M
3300018431\|Ga0066655_10942556	Not Available	593	Open in IMG/M
3300018431\|Ga0066655_11390937	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	509	Open in IMG/M
3300018433\|Ga0066667_10092548	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1986	Open in IMG/M
3300018433\|Ga0066667_10295872	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1256	Open in IMG/M
3300026538\|Ga0209056_10052805	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3621	Open in IMG/M
3300026909\|Ga0207858_1013326	All Organisms → cellular organisms → Bacteria → Proteobacteria	806	Open in IMG/M
3300026910\|Ga0207840_1006950	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1255	Open in IMG/M
3300026981\|Ga0207822_1004071	Not Available	1734	Open in IMG/M
3300026988\|Ga0207834_1042789	Not Available	507	Open in IMG/M
3300027003\|Ga0207722_1007438	Not Available	1319	Open in IMG/M
3300027014\|Ga0207815_1029450	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	668	Open in IMG/M
3300027014\|Ga0207815_1044365	Not Available	535	Open in IMG/M
3300027039\|Ga0207855_1003205	All Organisms → cellular organisms → Bacteria	2593	Open in IMG/M
3300027042\|Ga0207766_1013142	Not Available	958	Open in IMG/M
3300027063\|Ga0207762_1042219	Not Available	677	Open in IMG/M
3300027330\|Ga0207777_1075329	Not Available	589	Open in IMG/M
3300027516\|Ga0207761_1064876	Not Available	708	Open in IMG/M
3300027680\|Ga0207826_1009830	All Organisms → cellular organisms → Bacteria	2596	Open in IMG/M
3300027680\|Ga0207826_1086846	Not Available	861	Open in IMG/M
3300027680\|Ga0207826_1173837	Not Available	585	Open in IMG/M
3300027703\|Ga0207862_1020629	All Organisms → cellular organisms → Bacteria	1967	Open in IMG/M
3300027703\|Ga0207862_1104811	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	850	Open in IMG/M
3300027824\|Ga0209040_10051592	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2476	Open in IMG/M
3300027903\|Ga0209488_11040091	Not Available	564	Open in IMG/M
3300031015\|Ga0138298_1302920	Not Available	542	Open in IMG/M
3300031543\|Ga0318516_10075481	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1875	Open in IMG/M
3300031546\|Ga0318538_10035758	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	2352	Open in IMG/M
3300031546\|Ga0318538_10422391	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	722	Open in IMG/M
3300031549\|Ga0318571_10431769	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	519	Open in IMG/M
3300031561\|Ga0318528_10025005	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2891	Open in IMG/M
3300031573\|Ga0310915_10726290	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	701	Open in IMG/M
3300031573\|Ga0310915_10859461	Not Available	637	Open in IMG/M
3300031719\|Ga0306917_10123914	All Organisms → cellular organisms → Bacteria → Proteobacteria	1887	Open in IMG/M
3300031719\|Ga0306917_10158447	All Organisms → cellular organisms → Bacteria	1686	Open in IMG/M
3300031719\|Ga0306917_10376874	All Organisms → cellular organisms → Bacteria → Proteobacteria	1106	Open in IMG/M
3300031719\|Ga0306917_10868369	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	706	Open in IMG/M
3300031744\|Ga0306918_10122568	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1886	Open in IMG/M
3300031744\|Ga0306918_10555209	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	900	Open in IMG/M
3300031744\|Ga0306918_11053652	Not Available	631	Open in IMG/M
3300031747\|Ga0318502_10920930	Not Available	532	Open in IMG/M
3300031770\|Ga0318521_10718919	Not Available	607	Open in IMG/M
3300031781\|Ga0318547_10788028	Not Available	592	Open in IMG/M
3300031795\|Ga0318557_10068529	Not Available	1528	Open in IMG/M
3300031879\|Ga0306919_10399454	All Organisms → cellular organisms → Bacteria	1054	Open in IMG/M
3300031890\|Ga0306925_10816591	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	966	Open in IMG/M
3300031896\|Ga0318551_10412508	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	769	Open in IMG/M
3300031910\|Ga0306923_10420148	Not Available	1520	Open in IMG/M
3300031910\|Ga0306923_10887316	All Organisms → cellular organisms → Bacteria	978	Open in IMG/M
3300031910\|Ga0306923_10958949	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	932	Open in IMG/M
3300031910\|Ga0306923_12465103	Not Available	514	Open in IMG/M
3300031912\|Ga0306921_11152602	Not Available	866	Open in IMG/M
3300031912\|Ga0306921_11263331	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	819	Open in IMG/M
3300031912\|Ga0306921_11862399	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium icense	645	Open in IMG/M
3300031912\|Ga0306921_12354674	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	557	Open in IMG/M
3300031941\|Ga0310912_10315311	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1212	Open in IMG/M
3300031941\|Ga0310912_10690850	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	791	Open in IMG/M
3300031941\|Ga0310912_10758666	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	750	Open in IMG/M
3300031941\|Ga0310912_11276583	Not Available	557	Open in IMG/M
3300031942\|Ga0310916_10322274	Not Available	1311	Open in IMG/M
3300031942\|Ga0310916_10530678	All Organisms → cellular organisms → Bacteria	1002	Open in IMG/M
3300031942\|Ga0310916_11131674	Not Available	649	Open in IMG/M
3300031945\|Ga0310913_10530234	Not Available	836	Open in IMG/M
3300031946\|Ga0310910_10828177	Not Available	728	Open in IMG/M
3300031946\|Ga0310910_11128051	Not Available	610	Open in IMG/M
3300031954\|Ga0306926_10757658	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium icense	1173	Open in IMG/M
3300031954\|Ga0306926_10798332	Not Available	1138	Open in IMG/M
3300031954\|Ga0306926_11501306	Not Available	777	Open in IMG/M
3300032001\|Ga0306922_10207186	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2105	Open in IMG/M
3300032001\|Ga0306922_11279915	Not Available	743	Open in IMG/M
3300032035\|Ga0310911_10360322	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	840	Open in IMG/M
3300032044\|Ga0318558_10449254	Not Available	643	Open in IMG/M
3300032059\|Ga0318533_10323445	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1121	Open in IMG/M
3300032076\|Ga0306924_11889254	Not Available	619	Open in IMG/M
3300032076\|Ga0306924_12406675	All Organisms → cellular organisms → Bacteria → Proteobacteria	531	Open in IMG/M
3300032261\|Ga0306920_100010282	All Organisms → cellular organisms → Bacteria	12549	Open in IMG/M
3300032261\|Ga0306920_100434260	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1951	Open in IMG/M
3300032261\|Ga0306920_100668616	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. NAS80.1	1532	Open in IMG/M
3300032261\|Ga0306920_100928560	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1271	Open in IMG/M
3300032261\|Ga0306920_102488445	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	712	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.19%
Host-Associated	Host-Associated	2.81%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.38%
Aquatic	Environmental → Aquatic	2.81%
Plants	Host-Associated → Plants	2.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.38%
Freshwater	Environmental → Aquatic → Freshwater	1.69%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.69%
Sediment	Environmental → Aquatic → Sediment	1.12%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.56%
Roots	Host-Associated → Plants → Roots	0.56%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	73.03%
Loam	Environmental → Terrestrial → Soil → Loam	21.35%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.69%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.12%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.12%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.56%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.56%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	43.82%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	20.22%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.54%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	10.67%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.69%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.12%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.12%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.12%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.56%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	0.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.56%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	28.09%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	20.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.61%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.87%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.18%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.81%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.69%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.12%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.12%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.56%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.56%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	0.56%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.56%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	0.56%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.56%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.56%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.56%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003572	Grassland soil microbial communities from Hopland, California, USA - Sample H3_Bulk_40 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004267	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012022	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C6	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026909	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 23 (SPAdes)	Environmental	Open in IMG/M
3300026910	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 65 (SPAdes)	Environmental	Open in IMG/M
3300026981	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 67 (SPAdes)	Environmental	Open in IMG/M
3300026988	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 5 (SPAdes)	Environmental	Open in IMG/M
3300027003	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 26 (SPAdes)	Environmental	Open in IMG/M
3300027014	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 4 (SPAdes)	Environmental	Open in IMG/M
3300027039	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 14 (SPAdes)	Environmental	Open in IMG/M
3300027042	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 68 (SPAdes)	Environmental	Open in IMG/M
3300027063	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 37 (SPAdes)	Environmental	Open in IMG/M
3300027330	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 35 (SPAdes)	Environmental	Open in IMG/M
3300027516	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 34 (SPAdes)	Environmental	Open in IMG/M
3300027680	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80 (SPAdes)	Environmental	Open in IMG/M
3300027703	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300031015	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A9_MS_autumn Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1003535002	3300000364	Soil	MPLKADATNAALFRRRNSSMDTAMKAGIGATICSVLILALVFLAMHTLPVSIG*
F24TB_112534151	3300000550	Soil	MPSKSKITTAAPFRRRNHSMDPAMKAGIGAIACSVLFLAFVLLAIHTLPVSIG*
F24TB_127846472	3300000550	Soil	MPSKANATTATSSRRGNHSMDRAMKAGIGATACSVLIVALVLLAMHALPVSVG*
AF_2010_repII_A1DRAFT_100187973	3300000597	Forest Soil	MPAKSNAATVKSARRRNHSIDPALKAGIGATVCSVFIAALVLLAMHTLPVSLG*
AF_2010_repII_A1DRAFT_100687972	3300000597	Forest Soil	MPAKTNATAAKSARRRNHSIDPALKAGRSHFCSVFTVALVLLAMHTLPVSIG*
JGI10216J12902_1006030531	3300000956	Soil	MPSKANATSATSSRRNYRMDRAMKAGIAATACSLLIAALVLVAMHTLPVSVG*
JGI10216J12902_1095398571	3300000956	Soil	MPWKAKATIVAQFCKHRMDPAMKAGIGATAYSVLIVALVLLAMQMLPVSIG*
Ga0007424J51698_10147532	3300003572	Avena Fatua Rhizosphere	MREKSHATTAAWFHSRSHGMDEAMKAGVGATACSVFILAIAFLAMHALPVSIG*
Ga0062386_1011990001	3300004152	Bog Forest Soil	MLEKSHATTAASFYRRRHGMDEAMKAGIWASVCSVLILTIVLLAMHTLPVNIG*
Ga0062386_1016622881	3300004152	Bog Forest Soil	MPEKSHAKTTAASFHRRDHGMDDATKAGIGATVCSVLILAIVLVSMHTLPISIGYAAHSGRSVSLRWIAPGH*
Ga0066396_100835651	3300004267	Tropical Forest Soil	DKAKLMPPKTDATNAALFGRRNSSIDTAMKAGIGATICSVLILVLAFLAMTLPVSIG*
Ga0066395_101225672	3300004633	Tropical Forest Soil	MPSNATTAASFPRRNQSIDQAMKAGIGATACSVLILVIVLLAMHTVPLAIG*
Ga0066395_101794462	3300004633	Tropical Forest Soil	MPPKADATNAALFGRRNSSIDTAMKAGIGATICRVLILVLAFLAMTLPVSIG*
Ga0066683_100813513	3300005172	Soil	MPSKAKPTPAAPFRRRSQRFDPAMKAGIGATACSVLILALVLLAMHTLPVSIG*
Ga0066388_1001057294	3300005332	Tropical Forest Soil	MPPKTNATNAASFRHRNQSMDPAMKAGIGAIICSVLVVVLVLLVMHTLPVSIG*
Ga0066388_1007142372	3300005332	Tropical Forest Soil	MPAKTNATAAKSARRRNHSIDGFEGPNWSHFCSVFTVARVLLAMHTLPISIG*
Ga0066388_1015260623	3300005332	Tropical Forest Soil	MPPKANATTAASSRRRNYSMDPAMKAGIVATVCSVFIVALVFLAMHTLPVSLG*
Ga0066388_1015279113	3300005332	Tropical Forest Soil	MPLETNATNTAFSRRRNSRMDTAMKAGIGATICSVLILTLVFLAMHTLPVSIG*
Ga0066388_1018610311	3300005332	Tropical Forest Soil	MPPKADATNATSFRRRNSSMDTAMKAGIGATVCSVLILALVFLAMTLPVSIG*
Ga0066388_1041284322	3300005332	Tropical Forest Soil	MPSNATTAASFPRRNQSMDQAMKAGIGAIACSVLILVIVLLAMHMVPLTIG*
Ga0066388_1075654972	3300005332	Tropical Forest Soil	MPLKADATNAALVRRGKSSMDTAMKAGIGATMCSVLILALVFLAMTLPVSIG*
Ga0066689_107217312	3300005447	Soil	MPSKAKPTPAAPFRGRSQRFDPAMKAGIGATACSVLILALVLLAMHTLPVSIG*
Ga0066681_102832822	3300005451	Soil	MPSKANARTATSSRGGNHNMDRAMKAGIGATACSVLIVALVLLAMHALPVSIG*
Ga0066697_104244202	3300005540	Soil	MPSKAKPTTAAPFRRRSHRIDPAMKAGIGATACSVLILALVLLAMHTLPVSIG*
Ga0066695_100998633	3300005553	Soil	MPSKSKITPATPFRRRNHSMDPAMKAGIGAIACSVLFLAFVLLAMHTLPTSIG*
Ga0066707_100479534	3300005556	Soil	MPSKAKPTTAAPFRRRSQRIDPAMKAGIGATACSVLILALVLLAMHTLPVSIG*
Ga0066708_103756602	3300005576	Soil	MPSKAKPTTAAPFGRRSHRIDPAMKAGIGATACSVLILALVLLAMHTLPVSIG*
Ga0066905_1002414854	3300005713	Tropical Forest Soil	MPLETNATNTALSRRRNSRMDTAMKAGIGATICSVLILTLVFLAMHTLPVSIG*
Ga0066905_1012010651	3300005713	Tropical Forest Soil	MPLKANATSAASFRRRNDGMDQAMKAEVGATACSVLILAIVLLAMHALPVNIG*
Ga0066903_1001856144	3300005764	Tropical Forest Soil	MPSNATAAASFPRRNQSMDQAMKAGIGATACSVLILVIVLLAMHTVPLTIG*
Ga0066903_1006754823	3300005764	Tropical Forest Soil	MPPKANAPTAASSRRRNHSMDPAMKAGIVATVCSVFIVALVFLAMHTLPVSLG*
Ga0066903_1008316511	3300005764	Tropical Forest Soil	MPEKSHVTSPPSFHRRSHGMDEAMKAGVGATVCSVLILAIVLLAMHALPTSVG*
Ga0066903_1051572391	3300005764	Tropical Forest Soil	MLGKSHATTTASVHRCNRGMDEATKAGIGASVCSVFILAILFLAMHTLPFSIG*
Ga0066903_1061758692	3300005764	Tropical Forest Soil	MPLKADATNAALFRRRNSSMDTAMKTGIGATMCSVLILALVFLAMTLPVSIG*
Ga0066903_1063887431	3300005764	Tropical Forest Soil	MPDKSHAMAFHRRNRGMDKATKAGIGATVCSVLILAIVLLSMLMLPVSIGHAAPSGRSVSLH*
Ga0081538_102097532	3300005981	Tabebuia Heterophylla Rhizosphere	MTSKADATTLTLSRRDNHSMDRAMKAGIGATACSVLIVALVLLAMHAMPVSIG*
Ga0075026_1005884822	3300006057	Watersheds	MSEKSHATTAGWFHSRSQDMDEAMKAGIGATACSVLILLAIVLLAM*
Ga0066665_101066554	3300006796	Soil	MPSKAKPTTAAPFRRRSQRFDPAMKAGIGATACSVLILALVLLAMHTLPVSIG*
Ga0066665_113941402	3300006796	Soil	MPSNKTATAAPFRRRNHSIDPAMKAGIGATACSVLILALVLLVMHTLPVSIG*
Ga0066659_108243931	3300006797	Soil	MPSKSKITPATPFRRRNHSMDPAMKAGIGAIACSVLFLAFVLLAIHTLPTSIG*
Ga0066710_1002522854	3300009012	Grasslands Soil	MPSNKTATAAPFRRRNHSIDPAMKAGIGATACSVLILALVLLVMHTLPVSIG
Ga0099829_105403042	3300009038	Vadose Zone Soil	MKLMPEKSHATTAASFHRRSHGMDEAMKAGIGAIVCSVLVLAIVFLAMHTLPVSIG*
Ga0099827_109363582	3300009090	Vadose Zone Soil	MPEKSHATTAASFHRRNHGMDKATKAGVGATVCSVLILAIVLLSMHMLPVSIGHAAPSGQSVSLH*
Ga0099827_120092371	3300009090	Vadose Zone Soil	RVEPILGRSQCPNATTAAWFHSRSHGMDEAMKAGIGATACSVLILAIVLLAMHTLPVSVG
Ga0099792_104913532	3300009143	Vadose Zone Soil	MPEKSHATTAAWFHRRRHGMDEAMKAGIGATACSVLILAIVLLAMHTLPISIG*
Ga0114129_102242125	3300009147	Populus Rhizosphere	MPSKATTTTAASFRRRNFSMDPAMKAGIGATACSVLIVAIVLLAMQMLPVGIG*
Ga0126374_100072691	3300009792	Tropical Forest Soil	MPPKTDATNAALFGRRNSSIDTAMKAGIGATICSVLILVLAFLAMTLPVSIG*
Ga0126374_118767382	3300009792	Tropical Forest Soil	MPAKTNATRVKSARRRNHGIDPALKAGIGATVCSVFIAALVLLAMHTLPVSIG*
Ga0126384_114989231	3300010046	Tropical Forest Soil	MPAKTNASTVKSARRRNHSIDPALKAGIGATVCSVFIAALVLLAMHTLPVSLG*
Ga0126382_102258734	3300010047	Tropical Forest Soil	MPLKANATSAASFRRRNDGMDQAMKAEVGATACSVPILAIVLLAMHALPVNIG*
Ga0126382_106749271	3300010047	Tropical Forest Soil	MPLKADATNAALFRRRNSSMDTAMKAGIGATMCSVLILALVFLAMTLPVSIG*
Ga0126373_124804201	3300010048	Tropical Forest Soil	MPPKADATNAALFGRRNSSIDTAMKAGIGATICSVLILVLAFLAMTLPVSIG*
Ga0099796_103170041	3300010159	Vadose Zone Soil	SHATTAAPFHRRSHGMDEAMKAGIGATACSVLILAIVLLAMHTLPASVG*
Ga0099796_104884381	3300010159	Vadose Zone Soil	MFTRTQEITVASFRRRGQGMDEAMTAGIAATACSVLILAIVWLAMHALPVSIG*
Ga0126376_100550752	3300010359	Tropical Forest Soil	MPSNATTAASFPRRNQSIDQVMKAGIGATACGVLILVIVLLAMHTVPLTIG*
Ga0126381_1019111702	3300010376	Tropical Forest Soil	MPAKTNATRVKSARRRNHGIDPALKAGIGATVCSVFIAALVLLAMHTLPVSLG*
Ga0124844_10011474	3300010868	Tropical Forest Soil	MRSNATTAASFPRRNQSIDQAMKAGIGATACSVLILVIVLLAMHTVPLAIG*
Ga0137392_109090221	3300011269	Vadose Zone Soil	MPEKSHATTAAWFHRRSHGMDEAMKAGIGATACSVLILAIVLLAMHTLPISIG*
Ga0120191_100155621	3300012022	Terrestrial	MATKANSFRDRNVRLDPAMKAGIAATVCSVLIVALALLAMHTLPVGFG*
Ga0137389_104393391	3300012096	Vadose Zone Soil	MPEKSHATTAASVHRRSHGMDEAMKAGIGATVCSVLILAIVLLAMHTLPVSIG*
Ga0137389_111629791	3300012096	Vadose Zone Soil	MPEKSHATTAAWFHSRSHGMDEAMKAGIGATACSVLILAIVLLAMHTLPISIG*
Ga0137388_105721031	3300012189	Vadose Zone Soil	MKSHATTAASFHRRSHAMDEAMKAGIGATACSVLILAIVLLAMHTLPVSIG*
Ga0137374_100210604	3300012204	Vadose Zone Soil	MPAKRNATSAGSFGRRIHHMDEAMKAGLGATAFSVFILAVVLLAMHVLPVSAG*
Ga0137374_101937581	3300012204	Vadose Zone Soil	MKANATTATSSRRGSHSMDRAMKAGIGATACSVLIVALVLLTMHALPVSVG*
Ga0137381_110947811	3300012207	Vadose Zone Soil	MSSKVNATTAASFRGRNHSMDQAMKAGIGATACSVLILAIVLLAMHTLSVGIG*
Ga0137379_117880231	3300012209	Vadose Zone Soil	MPEKSHATTAASFHRRNHGMDKATQAGVGATVCSVLI
Ga0137378_110844292	3300012210	Vadose Zone Soil	MPSNKTTTAAPFRRRNHSIDPAMKAGIGATACSVLILALVLLVMHTLPVSIG*
Ga0137377_112501871	3300012211	Vadose Zone Soil	MPSKAKPTTAAPFRRRSQRIDPAMKAGIGATACSVLILALVLLVMHTLPVSIG*
Ga0137368_106838492	3300012358	Vadose Zone Soil	MATKANSFRDRNVRLDPAMKAGIAATACSVLIVALALLAMHTLPVGFG*
Ga0137360_118908011	3300012361	Vadose Zone Soil	KSHATTAASFHRRNHGMDKATKAGVGATVCSVLILAIVLLSMHMLPVSVGHAAPSGRSVSLH*
Ga0137361_102866302	3300012362	Vadose Zone Soil	MPEKSHATTAAWFHRRRHGMDEAMKAGIGATACSVLILAIVLLAMHTLPVSVG*
Ga0137390_104497273	3300012363	Vadose Zone Soil	MPEKSHATTAAWFHRRSHGMDEAMKAGIGATACSVLILAIVLLAMHRLPISIG*
Ga0150984_1077435702	3300012469	Avena Fatua Rhizosphere	MTEKSYTMTAAPFLSRSWGMDEAMKAGIGAAAGSVLILAIVLLAMHTLPVSFG*
Ga0126375_105137602	3300012948	Tropical Forest Soil	MPPKTDATNAALFGRRNSSIDTAMKAGIGATMCSVLILALVFLAMTLPVSIG*
Ga0126375_109344592	3300012948	Tropical Forest Soil	MPSNATTAASFPRRNQSIDQAMKAGIGATACSVLILVIVLLAKHTVPLAIG*
Ga0126369_117336512	3300012971	Tropical Forest Soil	MPSNATTAASFPRRNQSMDQAMKAGIGATACSVLILVIVLLAMHTVPLTIG*
Ga0132256_1024474041	3300015372	Arabidopsis Rhizosphere	MPDKSHAMAFHRRNRGMDKATKAGIGATVCSVLILAIVLLSMHMLPVSIGHAAQSSGRSVSLR*
Ga0182036_106747652	3300016270	Soil	MPEKFPATTAVSFHRRGRGMDEAMKAGVGATVCSVLILAIVLLAMHALPTSVG
Ga0182041_104096292	3300016294	Soil	MPEKSPATTAVSFHRRSRGMDEAMKAGVGATVCSVLILAIVLLAMHALPTSVG
Ga0182041_107806642	3300016294	Soil	MFEKSHATTTTASFRRRNHGMDEATKAGIGATVCSAFILAIVFLAMHTLPFSIG
Ga0182041_107917551	3300016294	Soil	MLEKSHVATAVSFHRRSHRMDEATKAGIGATLCSVVVLAVISLSIHM
Ga0182041_117865122	3300016294	Soil	MPEKFPATTAVSFHHRGRGMDEAMKAGVSATACSVLILAIVLLAMHALPTSVG
Ga0182033_110543661	3300016319	Soil	MPETSPATTAVSFHRRSRGMDEAMKAGVGATVCSVLILAIVLLAMHALPT
Ga0182033_121329121	3300016319	Soil	MPEKSHATSPASFHCRSHGMDEATKAGIGATLCSLVILAIVFLSMHMLP
Ga0182032_110532482	3300016357	Soil	MSEKSHATTTALFDRRNHGVDEATKAGIGATVCSVLILAIVFLAMHTLAFSIG
Ga0182034_107400731	3300016371	Soil	MPEKSHVTSRASFHRRSYGIDEATKAGIGATLCSLVILAIVLSMHLLSVNIGHAAPPARL
Ga0182034_107656571	3300016371	Soil	MSEKSHAANVAPFHRRGHGMDEATKAGIGAMLCSVVILATVLLSMHILPVSI
Ga0182034_108847222	3300016371	Soil	VSFHRRSRGMDEAMKAGVGATVCSVLILAIVLLAMHALPTSVG
Ga0182040_115539242	3300016387	Soil	MSEKSHAANVASFHRRGHGMDEATKAGIGAMLCSVVILATVLLSMHILPVSIGHAAPSGRSVSLH
Ga0182037_106313982	3300016404	Soil	MSEKSHATTTASFDRRNHGVDEATKAGIGATVCSVLILAIVFLAMHTLPFSIG
Ga0182037_108204242	3300016404	Soil	MPEKSHATTARRSRGMDEAMKAGVGATVCSVLILAIVLLATHALPTSVG
Ga0182037_109109041	3300016404	Soil	HRRSYGIDEATKAGIGATLCSLVILASVLLSMHMLPVSIGHAAPPVRLLSLQ
Ga0182037_116490431	3300016404	Soil	MPSNATTAASFPRRNQSMDQAMKAGIGATACSVLILVIVLLAMHTVPLTFG
Ga0182037_121139292	3300016404	Soil	MPLKANATSAASFRRRNDGMDQAMKAEIGATACSVLILAIVLQAMHALPVNSG
Ga0182039_101374621	3300016422	Soil	MPSNATTAASFPRRNQSMDQAMKAGIGATACSVLILVIVLLAMHTV
Ga0182039_112947321	3300016422	Soil	MPSNATAAASFPRRNQSMDQAMKAGIGATACSVLILVIVLLAMHTVPLTFG
Ga0182039_114489521	3300016422	Soil	MPETSPATTAVSFHRRSRGMDEAMKAGVGATVCSVLILAVVLLAMHALPTSVG
Ga0182039_120094732	3300016422	Soil	MRRTTLFAFAASFRRRRMDPAMKAGIWATACSVLIVALVFLAMNTLQVSIG
Ga0184605_102587072	3300018027	Groundwater Sediment	MPSKDEITTAAPFHRRNHSMDPAMKAGIGAIACSVLFLAFVLLAIHTLPASIG
Ga0066655_109425561	3300018431	Grasslands Soil	MPSKSKITPATPFRRRNHSMDPAMKAGIGAIACSVLFLAFVLLAMQTLPTSIG
Ga0066655_113909371	3300018431	Grasslands Soil	MPSKAKPTTAAPVRRRSHRIDPAMKAGIGATACSVLILALVLLAMHTLPVSIG
Ga0066667_100925484	3300018433	Grasslands Soil	MPSKAKPTPAAPFRRRSQRFDPAMKAGIGATACSVLILALVLLAMHTLPVSIG
Ga0066667_102958722	3300018433	Grasslands Soil	MPSKSKITPATPFRRRNHSMDPAMKAGIGAIACSVLFLAFVLLAMHTLPTSIG
Ga0209056_100528055	3300026538	Soil	MPSKAKPTTAAPFRRRSQRFDPAMKAGIGATACSVLILALVLLAMHTLPVSIG
Ga0207858_10133262	3300026909	Tropical Forest Soil	MPEKSYATTTASFHRRNHGMDEATKAGIGATICSVLILAIVLLAMHTLPTSVG
Ga0207840_10069502	3300026910	Tropical Forest Soil	MPEKSYAMTTASFHRRNHGMDEATKAGIGATICSVLILAIVLLAMHALPTSVG
Ga0207822_10040711	3300026981	Tropical Forest Soil	MPEKSYATTTASFHRRNHGMDEATKAGIGATICSVLILAIVLLAMHALPTSVG
Ga0207834_10427892	3300026988	Tropical Forest Soil	MKPMPEKSYATTTASFHRRNHGMDEATKAGIGATICSVLILAIVFLAMHTLPFSIG
Ga0207722_10074382	3300027003	Tropical Forest Soil	MPEKFPAMTAVSFHRRGRGMDEAMKAGVGATVCSVLILAIVLLAMHTLPTSV
Ga0207815_10294502	3300027014	Tropical Forest Soil	TTASFHRRNHGMDEATKAGIGATICSVLILAIVFLAMHTLPFSIG
Ga0207815_10443652	3300027014	Tropical Forest Soil	KPMPEKSPATTAVSFRRCSRGMDKAMKAGVGATVYSMLISAIVSLAMHALRTSVG
Ga0207855_10032051	3300027039	Tropical Forest Soil	MPEKSYATTTASFHRRNHGMDEATKAGIGAIVCSAFILAIVFLAMHTLPFSIG
Ga0207766_10131421	3300027042	Tropical Forest Soil	MPEKSPATTAVSFHLRGRGMDEAMKAGVGATACSVLILAIVLLAMHTFPTSVG
Ga0207762_10422191	3300027063	Tropical Forest Soil	MPEKSPATTAVSFRRRSRGMDEAMKAGVGATVCSVLILAIVLLAMHALPTSVG
Ga0207777_10753292	3300027330	Tropical Forest Soil	MPEKSPATTAVSFHRRSRGMNEAMKAGVGATVCSVLILAIVLLATHALPTSVG
Ga0207761_10648761	3300027516	Tropical Forest Soil	MPEKSHATTARSSRGMDEAIKAGIGATVCSVFILAIVLLAMHTLPTSVG
Ga0207826_10098304	3300027680	Tropical Forest Soil	KPMPEKSHATTTASFHRRNHGMDEATKAGIGATICSVLILAIVFLAMHTLPFSIG
Ga0207826_10868462	3300027680	Tropical Forest Soil	MPEKSPATTAVSFHRRGRGMDEAMKAGVGAAVCSVLILAIVLLAMHTLPTSVG
Ga0207826_11738371	3300027680	Tropical Forest Soil	MPETSPATTAVSFRRRSRGMDEAMKAGVGATVCSVLILAIVLLAMHALPTSVG
Ga0207862_10206291	3300027703	Tropical Forest Soil	MLEKSHATTARRSRGIDEAIKAGIGATVCSVFILAIVLLAMHALPTSVG
Ga0207862_11048111	3300027703	Tropical Forest Soil	MPEKSYATTTASFHRRNHGMDEATKAGIGATICSVLILAIVFLAMHTLPFSIG
Ga0209040_100515921	3300027824	Bog Forest Soil	MPEKSHATTAASFYRRRHGMDEAMKAGIWASVCSVLILTIVLLAMHTLPVNIG
Ga0209488_110400911	3300027903	Vadose Zone Soil	MPEKSHATTAAWFHRRRHGMDEAMKAGIGVTACSVLLLTIVFVAMHLLPFSGG
Ga0138298_13029201	3300031015	Soil	MPSKADATTAAPKRRRSMDPAMKAGIGATACSVLIFVLFLLAMHPLPVSIG
Ga0318516_100754812	3300031543	Soil	MPSNATTAASFPRRNQSIDQVMKAGIGATACGVLILVIVLLAMHTVPLTIG
Ga0318538_100357583	3300031546	Soil	MPPKANATTAASSRRRNHSMDPAMKAGIVATVCSVFIVALVFLAMHTLPVSVG
Ga0318538_104223911	3300031546	Soil	MPEKSHVTSRASFHRRSYGIDEATKAGIGATLCSLVILASVLLSMHMLPVSIGHAAPPVRLLSLQ
Ga0318571_104317691	3300031549	Soil	AASFPRRNQSIDQVMKAGIGATAYGVLILVIVLLAMHTVPLTIG
Ga0318528_100250052	3300031561	Soil	MPSNATTAASFPRRNQSIDQVMKAGIGATAYGVLILVIVLLAMHTVPLTIG
Ga0310915_107262902	3300031573	Soil	MLEKSHATTARRSRGMDEAIKAGIGATVCSVFILAIVLLAM
Ga0310915_108594611	3300031573	Soil	KSPATTVVSFHRRSRGMDEAMKAGVGATVCSVLILAIVLLATHALPTSVG
Ga0306917_101239143	3300031719	Soil	MPEKSHVTSRASFHRRSYGIDEATKAGIGATLCSLVILAIVLSMHLLSVNIGHAAPPARLLSLQ
Ga0306917_101584472	3300031719	Soil	MCEKSPATTVVSFHRRSRGMDEAMKAGVGATVCSVLILAIVLLATHALPTSVG
Ga0306917_103768742	3300031719	Soil	MFEKSHATTTTASFHRRNHGMDEATKAGIGATVCSAFILAIVFLAMHTLPFSIG
Ga0306917_108683692	3300031719	Soil	RCTKQTALNRMPAKTNATTAKSARRRNHSIDPALKAGIGATVCSVFIAALVLLAMHTLPVSLG
Ga0306918_101225683	3300031744	Soil	MPETSPATTAVSFHRRSRGMDEAMKAGVGATVCSVLILAIVLLAMHALPTSVG
Ga0306918_105552092	3300031744	Soil	MFEKSHAMTTTASFHRRNHSMNEAMKAGVGATVCSALILAIVLLAMHTLPTSLG
Ga0306918_110536521	3300031744	Soil	MPEKSHVTSRASFHRRSYGIDEATKAGIGATLCSLVILASVLLSMHMLPLSIGHAAPPARLLSLQ
Ga0318502_109209302	3300031747	Soil	MCEKSPATTVVSFHRRSRGMDEAMKAGVGATVCSVLILAVVLLAMHALPTSVG
Ga0318521_107189191	3300031770	Soil	SPATTVVSFHRRSRGMDEAMKAGVGATVCSVLILAIVLLATHALPTSVG
Ga0318547_107880282	3300031781	Soil	MPEKSHVTSRASFHRRSYGIDEATKAGIGATLCSLVILASVLLSMHMLPVSIGHAAPPARLLSLQ
Ga0318557_100685291	3300031795	Soil	MPSNATTAASFPRRNQSMDQAMKAGIGATACSVLILVIVLLAMHTVPL
Ga0306919_103994542	3300031879	Soil	MPETSPATTAVSFHRRSRGMDEAMKAGVGATVCSVLILAIVLLA
Ga0306925_108165912	3300031890	Soil	MPETSPATTAVSFHRRSRGMDEAMKAGVGATVCSVLILAIVLLATHALPTSVG
Ga0318551_104125081	3300031896	Soil	TAASFPRRNQSMDQAMKAGIGATACSVLILVIVLLAMHTVPLTIG
Ga0306923_104201482	3300031910	Soil	MPETSPATTAVSFHRRSRGMDEAMKAGVGATVCSVLILAIVLLATH
Ga0306923_108873162	3300031910	Soil	MSEKSHAANVASFHRRGHGMDEATKAGIGAMLCSVVILATVLLSMHILPVSI
Ga0306923_109589492	3300031910	Soil	MPSNATTAASFPRRNQSIDQAMKAGIGATACSVLILVIVLLAMHTVPLAIG
Ga0306923_124651032	3300031910	Soil	SHVTSRASFHRRSYGIDEATKAGIGATLCSLVILAGVLLSMHMLPVSIGHAAPTARLLSL
Ga0306921_111526022	3300031912	Soil	MFEKSHATTTNTSFHRRNHGMDEATKAGIGATVCSAFILAIVFLAMHTLPFSIG
Ga0306921_112633311	3300031912	Soil	TTASVHLRNRGMDEATKAGIGATVCSVFILAIVFLAMHTLPFSIG
Ga0306921_118623991	3300031912	Soil	PSKANATTAASFHRRNHRMDQAMKAGMGATACSVLIVAIVLLAMHTLPVSIG
Ga0306921_123546741	3300031912	Soil	MCEKSPATTVVSFHRRSRGMDEAMKAGVGATVCSVLILAIVLLAMHALPTSVG
Ga0310912_103153112	3300031941	Soil	MFEKSHATTTTASFHRRNHGMDEATKAGIGATVCSVLILAIVLLAMHTLPLSIG
Ga0310912_106908502	3300031941	Soil	MPSNATNAASFPRRNQSMDQAMKAGIGATACSVLILVIVLLAMHTVPLTIG
Ga0310912_107586662	3300031941	Soil	PSNATNAASFPRRNQSMDQAMKAGIGATACSVLILVIVLLAMHTVPLTIG
Ga0310912_112765832	3300031941	Soil	MLEKSHVATAVSFHRRSHRMDEATKAGIGATLCSVVVLAVISLSIHMLPGSVGHAAIPARSVSLH
Ga0310916_103222743	3300031942	Soil	MPEKSHATTTASFHRRNHGMDEATKAGIGATVCSVLILASVLLAMHTLPLSIG
Ga0310916_105306783	3300031942	Soil	RMKPMPETSPATTAVSFHRRSRGMDEAMKAGVGATVCSVLILAIVLLATHALPTSVG
Ga0310916_111316741	3300031942	Soil	MLEKSHATTARRSRGMDEAIKAGIGATVCSAFILAIVLLAMHTLPTSAG
Ga0310913_105302342	3300031945	Soil	MCEKSPATTVVSFHRRSRGMDEAMKAGVGATVCSVLILAIVLLAMHTLPISVG
Ga0310910_108281772	3300031946	Soil	VSFHRRSRGMDEAMKAGVGATVCSVLILAIVLLATHALPTSVG
Ga0310910_111280511	3300031946	Soil	MPEKSHATTTASFHRRNHGMDEATKAGIGATVCSVLILAIVLLAMHTLPLSIG
Ga0306926_107576582	3300031954	Soil	MPSNATAAASFPRRNQSMDQAMKAGIGATACSVLILVIVLLAMHTVPLTIG
Ga0306926_107983322	3300031954	Soil	MPEKSHATTTASFHRRNHGMDEATKAGIGATVCSAFILAIVFLAMHTLPFSIG
Ga0306926_115013061	3300031954	Soil	SPATTAVSFHRRSRGMDEAMKAGVGATVCSVLILAIVLLATHALPTSVG
Ga0306922_102071862	3300032001	Soil	MPEKSHVTSRASFHRRSYGIDEATKAGIGATLCSLVILASVLLSMHMLPISIGHAAPPARLLSLQ
Ga0306922_112799152	3300032001	Soil	MSEKSHATTTASFHRRNHGMDEATKAGIGATVCSVLILAIVLLAMHTLPLSIG
Ga0310911_103603222	3300032035	Soil	MFEKSHATTTTASFHRRNHGMDEATKAGIGATVCSAFILAIVFLAMHTLPF
Ga0318558_104492541	3300032044	Soil	MPEKSHVTSRASFHRRSYGIDEATKAGIGATLCSLVILASVLLSMHMLPVSIGHAAPPGPSLWLH
Ga0318533_103234451	3300032059	Soil	MPEKSHVTSRASFHRRSYGIDEATKAGIGATLCSLVILAGVLLSMHMLPVSIGHAAPTARLLSLQ
Ga0306924_118892541	3300032076	Soil	MPETSPATTAVSFHRRSRGMDEAMKAGVGATVCSVLILAIVLLAM
Ga0306924_124066751	3300032076	Soil	MSEKSHAANVASFHRRGHGMDEATKAGIGAMLCSVVILATVLLSMHILPVSIGHAAPSGRSVSLY
Ga0306920_10001028211	3300032261	Soil	MPAKTNATTAKSARRRNHSIDPALKAGIGATVCSVFIAALVLLAMHTLPVSLG
Ga0306920_1004342603	3300032261	Soil	MPSNATTAASFPRRNQSMDQAMKAGIGATACSVLILVIVLLAMHTVPLTIG
Ga0306920_1006686162	3300032261	Soil	MPSNATTAASFPHRNQQGMDQVMKAGIGATACSVLMLVIVLLAMHTVPLTIG
Ga0306920_1009285602	3300032261	Soil	MPSKANATTAASFHRRNHRMDQAMKAGMGATACSVLIVAIVLLAMHTLPVSIG
Ga0306920_1024884451	3300032261	Soil	MPETSPATTAVSFHRRSRGMDEAMKAGVGATVCSVLILAIVLLAT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F032968

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences