Metagenome / Metatranscriptome Family F033207

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F033207
Family Type	Metagenome / Metatranscriptome
Number of Sequences	178
Average Sequence Length	37 residues
Representative Sequence	MTINVLPDHVMRTVFFSLAAAIVVSVGMLLLTTLHP
Number of Associated Samples	126
Number of Associated Scaffolds	178

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	78.09 %
% of genes near scaffold ends (potentially truncated)	23.03 %
% of genes from short scaffolds (< 2000 bps)	77.53 %
Associated GOLD sequencing projects	112
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.51

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (68.539 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil (21.348 % of family members)
Environment Ontology (ENVO)	Unclassified (35.393 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.371 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 46.88% β-sheet: 0.00% Coil/Unstructured: 53.12%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.51
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.51
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 178 Family Scaffolds
PF09361	Phasin_2	13.48
PF00166	Cpn10	5.06
PF00118	Cpn60_TCP1	2.25
PF08379	Bact_transglu_N	1.69
PF01521	Fe-S_biosyn	1.69
PF13439	Glyco_transf_4	1.12
PF13545	HTH_Crp_2	1.12
PF00011	HSP20	1.12
PF01391	Collagen	1.12
PF03401	TctC	0.56
PF00582	Usp	0.56
PF07568	HisKA_2	0.56
PF01329	Pterin_4a	0.56
PF00534	Glycos_transf_1	0.56
PF00152	tRNA-synt_2	0.56
PF04134	DCC1-like	0.56
PF04226	Transgly_assoc	0.56
PF07238	PilZ	0.56
PF00271	Helicase_C	0.56
PF02826	2-Hacid_dh_C	0.56
PF07724	AAA_2	0.56
PF13581	HATPase_c_2	0.56
PF01883	FeS_assembly_P	0.56
PF07929	PRiA4_ORF3	0.56
PF06568	DUF1127	0.56
PF13751	DDE_Tnp_1_6	0.56
PF14534	DUF4440	0.56
PF13358	DDE_3	0.56
PF07883	Cupin_2	0.56
PF08734	GYD	0.56
PF12973	Cupin_7	0.56
PF02653	BPD_transp_2	0.56
PF03734	YkuD	0.56

COG ID	Name	Functional Category	% Frequency in 178 Family Scaffolds
COG0234	Co-chaperonin GroES (HSP10)	Posttranslational modification, protein turnover, chaperones [O]	5.06
COG0459	Chaperonin GroEL (HSP60 family)	Posttranslational modification, protein turnover, chaperones [O]	2.25
COG0316	Fe-S cluster assembly iron-binding protein IscA	Posttranslational modification, protein turnover, chaperones [O]	1.69
COG1305	Transglutaminase-like enzyme, putative cysteine protease	Posttranslational modification, protein turnover, chaperones [O]	1.69
COG4841	Uncharacterized conserved protein YneR, related to HesB/YadR/YfhF family	Function unknown [S]	1.69
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	1.12
COG0017	Aspartyl/asparaginyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.56
COG0173	Aspartyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.56
COG1190	Lysyl-tRNA synthetase, class II	Translation, ribosomal structure and biogenesis [J]	0.56
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	0.56
COG2154	Pterin-4a-carbinolamine dehydratase	Coenzyme transport and metabolism [H]	0.56
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	0.56
COG2269	Elongation factor P--beta-lysine ligase (EF-P beta-lysylation pathway)	Translation, ribosomal structure and biogenesis [J]	0.56
COG3011	Predicted thiol-disulfide oxidoreductase YuxK, DCC family	General function prediction only [R]	0.56
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	0.56
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.56
COG3920	Two-component sensor histidine kinase, HisKA and HATPase domains	Signal transduction mechanisms [T]	0.56
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	0.56
COG5457	Uncharacterized conserved protein YjiS, DUF1127 family	Function unknown [S]	0.56

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	68.54 %
Unclassified	root	N/A	31.46 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	68.54 %
Unclassified	root	N/A	31.46 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	68.54 %
Unclassified	root	N/A	31.46 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	32.02 %
Unclassified	root	N/A	31.46 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.46 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	29.21 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.56 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.46 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	15.73 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.56 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.56 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.46 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.37 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	0.56 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.56 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	0.56 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.56 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.56 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.46 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.56 %
Pseudolabrys	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys	0.56 %
Methyloferula	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methyloferula	0.56 %
Xanthomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Xanthomonas	0.56 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.56 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.56 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.46 %
Xanthomonas citri group	species group	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Xanthomonas → Xanthomonas citri group	0.56 %
Methyloferula stellata	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methyloferula → Methyloferula stellata	0.56 %
unclassified Pseudolabrys	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys	0.56 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.56 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.56 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.56 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.46 %
Pseudolabrys sp. Root1462	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	0.56 %
Xanthomonas citri	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Xanthomonas → Xanthomonas citri group → Xanthomonas citri	0.56 %
Methyloferula stellata	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methyloferula → Methyloferula stellata	0.56 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.56 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.56 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.56 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.56 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2166559005\|cont_contig30004	Not Available	1070	Open in IMG/M
2189573004\|GZGWRS402FL579	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101209247	Not Available	539	Open in IMG/M
3300000567\|JGI12270J11330_10052119	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2181	Open in IMG/M
3300002677\|Ga0005475J37263_107383	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300004091\|Ga0062387_100626280	Not Available	776	Open in IMG/M
3300004152\|Ga0062386_101717157	Not Available	524	Open in IMG/M
3300005538\|Ga0070731_10011790	All Organisms → cellular organisms → Bacteria	6387	Open in IMG/M
3300005542\|Ga0070732_10000190	All Organisms → cellular organisms → Bacteria → Proteobacteria	49671	Open in IMG/M
3300005561\|Ga0066699_11020232	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300005569\|Ga0066705_10424390	All Organisms → cellular organisms → Bacteria	833	Open in IMG/M
3300006041\|Ga0075023_100044871	Not Available	1362	Open in IMG/M
3300006041\|Ga0075023_100291441	All Organisms → cellular organisms → Bacteria	669	Open in IMG/M
3300006041\|Ga0075023_100313518	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300006047\|Ga0075024_100395466	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	702	Open in IMG/M
3300006050\|Ga0075028_100204575	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1067	Open in IMG/M
3300006052\|Ga0075029_100126687	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1554	Open in IMG/M
3300006052\|Ga0075029_100678759	Not Available	693	Open in IMG/M
3300006052\|Ga0075029_101177758	Not Available	534	Open in IMG/M
3300006057\|Ga0075026_100047603	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2011	Open in IMG/M
3300006057\|Ga0075026_100177302	All Organisms → cellular organisms → Bacteria	1109	Open in IMG/M
3300006059\|Ga0075017_100526178	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	899	Open in IMG/M
3300006059\|Ga0075017_101662371	Not Available	504	Open in IMG/M
3300006086\|Ga0075019_10384831	All Organisms → cellular organisms → Bacteria	856	Open in IMG/M
3300006172\|Ga0075018_10034817	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2032	Open in IMG/M
3300006174\|Ga0075014_100083347	All Organisms → cellular organisms → Bacteria	1456	Open in IMG/M
3300006175\|Ga0070712_100045141	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3041	Open in IMG/M
3300006176\|Ga0070765_100748366	Not Available	923	Open in IMG/M
3300006755\|Ga0079222_10099160	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1525	Open in IMG/M
3300006755\|Ga0079222_10366270	All Organisms → cellular organisms → Bacteria	983	Open in IMG/M
3300006893\|Ga0073928_10099921	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2438	Open in IMG/M
3300006893\|Ga0073928_10322394	Not Available	1153	Open in IMG/M
3300006914\|Ga0075436_101293476	Not Available	551	Open in IMG/M
3300007982\|Ga0102924_1020930	All Organisms → cellular organisms → Bacteria	4769	Open in IMG/M
3300009519\|Ga0116108_1005438	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	5434	Open in IMG/M
3300009519\|Ga0116108_1023545	Not Available	2083	Open in IMG/M
3300009521\|Ga0116222_1162479	All Organisms → cellular organisms → Bacteria	961	Open in IMG/M
3300009522\|Ga0116218_1021341	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2880	Open in IMG/M
3300009522\|Ga0116218_1560066	Not Available	508	Open in IMG/M
3300009524\|Ga0116225_1567118	Not Available	502	Open in IMG/M
3300009623\|Ga0116133_1119338	Not Available	679	Open in IMG/M
3300009630\|Ga0116114_1015444	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2369	Open in IMG/M
3300009683\|Ga0116224_10309694	All Organisms → cellular organisms → Bacteria	751	Open in IMG/M
3300009698\|Ga0116216_10305478	All Organisms → cellular organisms → Bacteria	969	Open in IMG/M
3300009698\|Ga0116216_10990704	Not Available	502	Open in IMG/M
3300009700\|Ga0116217_10070991	All Organisms → cellular organisms → Bacteria → Proteobacteria	2445	Open in IMG/M
3300009700\|Ga0116217_10118676	Not Available	1792	Open in IMG/M
3300009700\|Ga0116217_10958507	Not Available	524	Open in IMG/M
3300009824\|Ga0116219_10199697	All Organisms → cellular organisms → Bacteria	1145	Open in IMG/M
3300009839\|Ga0116223_10049725	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2743	Open in IMG/M
3300009839\|Ga0116223_10285830	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	987	Open in IMG/M
3300009839\|Ga0116223_10337193	Not Available	894	Open in IMG/M
3300009839\|Ga0116223_10347704	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	878	Open in IMG/M
3300010343\|Ga0074044_10037354	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3385	Open in IMG/M
3300010343\|Ga0074044_10154559	All Organisms → cellular organisms → Bacteria	1533	Open in IMG/M
3300010343\|Ga0074044_10368383	All Organisms → cellular organisms → Bacteria	942	Open in IMG/M
3300010379\|Ga0136449_100951289	Not Available	1391	Open in IMG/M
3300010379\|Ga0136449_101013322	Not Available	1335	Open in IMG/M
3300010379\|Ga0136449_101116192	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1253	Open in IMG/M
3300010379\|Ga0136449_101182753	All Organisms → cellular organisms → Bacteria	1206	Open in IMG/M
3300010379\|Ga0136449_101749461	Not Available	933	Open in IMG/M
3300010379\|Ga0136449_103434372	Not Available	605	Open in IMG/M
3300010396\|Ga0134126_10996571	Not Available	938	Open in IMG/M
3300010937\|Ga0137776_1680496	Not Available	703	Open in IMG/M
3300011089\|Ga0138573_1233860	Not Available	730	Open in IMG/M
3300011120\|Ga0150983_10256034	All Organisms → cellular organisms → Bacteria	1056	Open in IMG/M
3300011120\|Ga0150983_10477750	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methyloferula → Methyloferula stellata	528	Open in IMG/M
3300011120\|Ga0150983_10606139	All Organisms → cellular organisms → Bacteria	915	Open in IMG/M
3300011120\|Ga0150983_13952786	All Organisms → cellular organisms → Bacteria	827	Open in IMG/M
3300011120\|Ga0150983_14260436	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300011120\|Ga0150983_15038390	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300011120\|Ga0150983_15601617	Not Available	686	Open in IMG/M
3300011120\|Ga0150983_16610024	Not Available	574	Open in IMG/M
3300012206\|Ga0137380_10051194	All Organisms → cellular organisms → Bacteria	3787	Open in IMG/M
3300012208\|Ga0137376_10060236	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3128	Open in IMG/M
3300012364\|Ga0134027_1074048	All Organisms → cellular organisms → Bacteria	807	Open in IMG/M
3300012955\|Ga0164298_10145969	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1322	Open in IMG/M
3300014156\|Ga0181518_10136274	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1330	Open in IMG/M
3300014158\|Ga0181521_10041960	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3275	Open in IMG/M
3300014159\|Ga0181530_10050801	All Organisms → cellular organisms → Bacteria	2717	Open in IMG/M
3300014159\|Ga0181530_10428168	All Organisms → cellular organisms → Bacteria	669	Open in IMG/M
3300014162\|Ga0181538_10698693	Not Available	525	Open in IMG/M
3300014164\|Ga0181532_10041077	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3120	Open in IMG/M
3300014164\|Ga0181532_10246505	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1028	Open in IMG/M
3300014164\|Ga0181532_10737316	Not Available	530	Open in IMG/M
3300014165\|Ga0181523_10103145	All Organisms → cellular organisms → Bacteria	1711	Open in IMG/M
3300014165\|Ga0181523_10731548	Not Available	540	Open in IMG/M
3300014169\|Ga0181531_10659973	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300014638\|Ga0181536_10139352	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1295	Open in IMG/M
3300014638\|Ga0181536_10254880	Not Available	838	Open in IMG/M
3300015373\|Ga0132257_102857892	Not Available	629	Open in IMG/M
3300016750\|Ga0181505_10298468	Not Available	1321	Open in IMG/M
3300017823\|Ga0187818_10026529	All Organisms → cellular organisms → Bacteria	2480	Open in IMG/M
3300017924\|Ga0187820_1297556	Not Available	530	Open in IMG/M
3300017925\|Ga0187856_1013748	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4460	Open in IMG/M
3300017925\|Ga0187856_1025958	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2876	Open in IMG/M
3300017929\|Ga0187849_1053256	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1877	Open in IMG/M
3300017931\|Ga0187877_1025538	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3067	Open in IMG/M
3300017932\|Ga0187814_10005670	All Organisms → cellular organisms → Bacteria	5026	Open in IMG/M
3300017933\|Ga0187801_10217025	All Organisms → cellular organisms → Bacteria	761	Open in IMG/M
3300017934\|Ga0187803_10021153	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2594	Open in IMG/M
3300017935\|Ga0187848_10165401	Not Available	967	Open in IMG/M
3300017942\|Ga0187808_10043137	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1894	Open in IMG/M
3300017943\|Ga0187819_10555376	Not Available	652	Open in IMG/M
3300017946\|Ga0187879_10177286	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1199	Open in IMG/M
3300017955\|Ga0187817_10177308	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1357	Open in IMG/M
3300017988\|Ga0181520_10564325	Not Available	795	Open in IMG/M
3300017996\|Ga0187891_1185453	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
3300018009\|Ga0187884_10096272	All Organisms → cellular organisms → Bacteria	1296	Open in IMG/M
3300018013\|Ga0187873_1386284	Not Available	510	Open in IMG/M
3300018014\|Ga0187860_1402602	Not Available	513	Open in IMG/M
3300018016\|Ga0187880_1184774	Not Available	955	Open in IMG/M
3300018017\|Ga0187872_10210225	Not Available	892	Open in IMG/M
3300018018\|Ga0187886_1222439	Not Available	721	Open in IMG/M
3300018023\|Ga0187889_10182240	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	976	Open in IMG/M
3300018024\|Ga0187881_10142407	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1051	Open in IMG/M
3300018038\|Ga0187855_10146783	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1408	Open in IMG/M
3300018040\|Ga0187862_10901995	Not Available	505	Open in IMG/M
3300018042\|Ga0187871_10299011	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Xanthomonas → Xanthomonas citri group → Xanthomonas citri	891	Open in IMG/M
3300019185\|Ga0184587_100241	All Organisms → cellular organisms → Bacteria	956	Open in IMG/M
3300019186\|Ga0184588_118141	Not Available	678	Open in IMG/M
3300019186\|Ga0184588_124152	Not Available	529	Open in IMG/M
3300019187\|Ga0184584_133844	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300019194\|Ga0184586_135238	Not Available	614	Open in IMG/M
3300019888\|Ga0193751_1009434	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5207	Open in IMG/M
3300020579\|Ga0210407_10385756	All Organisms → cellular organisms → Bacteria	1096	Open in IMG/M
3300020579\|Ga0210407_10570870	All Organisms → cellular organisms → Bacteria	882	Open in IMG/M
3300020580\|Ga0210403_10062238	All Organisms → cellular organisms → Bacteria	2992	Open in IMG/M
3300020580\|Ga0210403_10453571	All Organisms → cellular organisms → Bacteria	1044	Open in IMG/M
3300020580\|Ga0210403_10526440	All Organisms → cellular organisms → Bacteria	959	Open in IMG/M
3300020580\|Ga0210403_10596250	All Organisms → cellular organisms → Bacteria	892	Open in IMG/M
3300020580\|Ga0210403_10786062	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M
3300021168\|Ga0210406_10520195	All Organisms → cellular organisms → Bacteria	938	Open in IMG/M
3300021168\|Ga0210406_10575135	All Organisms → cellular organisms → Bacteria	882	Open in IMG/M
3300021178\|Ga0210408_10032604	All Organisms → cellular organisms → Bacteria → Proteobacteria	4115	Open in IMG/M
3300021402\|Ga0210385_10359861	All Organisms → cellular organisms → Bacteria	1088	Open in IMG/M
3300021403\|Ga0210397_10844429	All Organisms → cellular organisms → Bacteria	708	Open in IMG/M
3300021404\|Ga0210389_10790166	Not Available	742	Open in IMG/M
3300021478\|Ga0210402_11263896	All Organisms → cellular organisms → Bacteria	665	Open in IMG/M
3300022557\|Ga0212123_10117861	All Organisms → cellular organisms → Bacteria	2120	Open in IMG/M
3300023536\|Ga0247552_101314	All Organisms → cellular organisms → Bacteria	734	Open in IMG/M
3300024271\|Ga0224564_1043918	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	863	Open in IMG/M
3300025320\|Ga0209171_10352347	Not Available	768	Open in IMG/M
3300025473\|Ga0208190_1027923	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1278	Open in IMG/M
3300025915\|Ga0207693_10034200	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4009	Open in IMG/M
3300027497\|Ga0208199_1034539	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1100	Open in IMG/M
3300027570\|Ga0208043_1073802	All Organisms → cellular organisms → Bacteria	954	Open in IMG/M
3300027625\|Ga0208044_1027929	All Organisms → cellular organisms → Bacteria	1946	Open in IMG/M
3300027696\|Ga0208696_1016805	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2825	Open in IMG/M
3300027696\|Ga0208696_1196754	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	640	Open in IMG/M
3300027768\|Ga0209772_10259258	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300027783\|Ga0209448_10069410	All Organisms → cellular organisms → Bacteria	1185	Open in IMG/M
3300027824\|Ga0209040_10491446	Not Available	547	Open in IMG/M
3300027842\|Ga0209580_10000004	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	708731	Open in IMG/M
3300027854\|Ga0209517_10200185	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1233	Open in IMG/M
3300027869\|Ga0209579_10021119	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3669	Open in IMG/M
3300027884\|Ga0209275_10243382	Not Available	985	Open in IMG/M
3300027905\|Ga0209415_10079022	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3813	Open in IMG/M
3300027915\|Ga0209069_10217015	All Organisms → cellular organisms → Bacteria	982	Open in IMG/M
3300029636\|Ga0222749_10349785	Not Available	774	Open in IMG/M
3300030597\|Ga0210286_1098055	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M
3300030659\|Ga0316363_10272113	Not Available	684	Open in IMG/M
3300031057\|Ga0170834_102713422	All Organisms → cellular organisms → Bacteria	952	Open in IMG/M
3300031128\|Ga0170823_15392478	All Organisms → cellular organisms → Bacteria	822	Open in IMG/M
3300031446\|Ga0170820_15235261	All Organisms → cellular organisms → Bacteria	1129	Open in IMG/M
3300032160\|Ga0311301_10003038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	62791	Open in IMG/M
3300032160\|Ga0311301_10066514	All Organisms → cellular organisms → Bacteria	7724	Open in IMG/M
3300032160\|Ga0311301_10319413	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2465	Open in IMG/M
3300032160\|Ga0311301_10347986	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2321	Open in IMG/M
3300032160\|Ga0311301_10710018	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1410	Open in IMG/M
3300032160\|Ga0311301_11090724	All Organisms → cellular organisms → Bacteria	1040	Open in IMG/M
3300032160\|Ga0311301_11310456	Not Available	914	Open in IMG/M
3300032515\|Ga0348332_11164556	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1486	Open in IMG/M
3300032515\|Ga0348332_12534564	Not Available	535	Open in IMG/M
3300032515\|Ga0348332_12763401	All Organisms → cellular organisms → Bacteria	883	Open in IMG/M
3300032756\|Ga0315742_12459696	Not Available	593	Open in IMG/M
3300032770\|Ga0335085_10716254	All Organisms → cellular organisms → Bacteria	1111	Open in IMG/M
3300032892\|Ga0335081_10143815	All Organisms → cellular organisms → Bacteria → Proteobacteria	3427	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.31%
Host-Associated	Host-Associated	1.12%
Engineered	Engineered	0.56%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	57.30%
Aquatic	Environmental → Aquatic	41.01%
Plants	Host-Associated → Plants	1.12%
Modeled	Engineered → Modeled	0.56%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	55.62%
Freshwater	Environmental → Aquatic → Freshwater	28.65%
Sediment	Environmental → Aquatic → Sediment	8.99%
Thermal Springs	Environmental → Aquatic → Thermal Springs	3.37%
Plant Litter	Environmental → Terrestrial → Plant Litter	1.69%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.56%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.56%
Simulated Communities (Sequence Read Mixture)	Engineered → Modeled → Simulated Communities (Sequence Read Mixture)	0.56%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	45.51%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	28.65%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	8.99%
Loam	Environmental → Terrestrial → Soil → Loam	7.30%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	3.37%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.81%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	1.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.56%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified	0.56%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	31.46%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	21.35%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.24%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	8.99%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.18%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.49%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.81%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	2.81%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.81%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.69%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	1.69%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.12%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.12%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment	0.56%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.56%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified	0.56%

Habitat	Taxonomy	Distribution
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	21.35%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	10.67%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	8.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.99%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	7.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.06%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.06%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.49%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.25%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.25%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.81%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	2.81%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	2.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.69%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.69%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	1.69%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.12%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.12%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.12%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.12%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.12%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment	0.56%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.56%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.56%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.56%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.56%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.56%
Simulated	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified → Simulated	0.56%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2166559005	Simulated microbial communities from Lyon, France	Engineered	Open in IMG/M
2189573004	Grass soil microbial communities from Rothamsted Park, UK - FG2 (Nitrogen)	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300002677	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF124 (Metagenome Metatranscriptome, Counting Only)	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007982	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG	Environmental	Open in IMG/M
3300009519	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300009630	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_40	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010937	Fumarole sediment microbial communities, Furnas, Sao Miguel, Azores. Combined Assembly of Gp0156138, Gp0156139	Environmental	Open in IMG/M
3300011089	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 58 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014638	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaG	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017925	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40	Environmental	Open in IMG/M
3300017929	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100	Environmental	Open in IMG/M
3300017931	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300017996	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_40	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018013	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_100	Environmental	Open in IMG/M
3300018014	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_40	Environmental	Open in IMG/M
3300018016	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_40	Environmental	Open in IMG/M
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental	Open in IMG/M
3300018018	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_150	Environmental	Open in IMG/M
3300018023	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100	Environmental	Open in IMG/M
3300018024	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_100	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300019185	Soil microbial communities from Bohemian Forest, Czech Republic ? CSE2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019186	Soil microbial communities from Bohemian Forest, Czech Republic ? CSE3 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019187	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019194	Soil microbial communities from Bohemian Forest, Czech Republic ? CSE1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300023536	Metatranscriptome of spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZE4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300024271	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU5	Environmental	Open in IMG/M
3300025320	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG (SPAdes)	Environmental	Open in IMG/M
3300025473	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10 (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300027497	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG (SPAdes)	Environmental	Open in IMG/M
3300027570	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG (SPAdes)	Environmental	Open in IMG/M
3300027625	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG (SPAdes)	Environmental	Open in IMG/M
3300027696	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG (SPAdes)	Environmental	Open in IMG/M
3300027768	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030597	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO747-VDE046SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032756	Forest Soil Metatranscriptomics Site 2 Humus Litter Mineral Combined Assembly	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
cont_0004.00002760	2166559005	Simulated	MTINVLPDHVMRTVFFSLAAAIVVSVGMLLLTALHP
FG2_08128750	2189573004	Grass Soil	MTTNVLPDRVIRTVFFSLAAAIAVFVGMLLLTTLYL
INPhiseqgaiiFebDRAFT_1012092472	3300000364	Soil	MTINVLPDHVMRTVFFSLAAAIVVSVGMLLLTALHP*
JGI12270J11330_100521192	3300000567	Peatlands Soil	MHVNVLPDYVMRAVFFSLTGAIFVFVAMLLFTALHP*
Ga0005475J37263_1073832	3300002677	Forest Soil	MTANVLHDRVMRTVYFSLLAAIAVFVGMLLLTTLHPYETRAVRSATDARIV*
Ga0062387_1006262802	3300004091	Bog Forest Soil	MTINVLPDHVMRTVFFSLAAAIVVFVGMLLLTTLHSKETHAV*
Ga0062386_1017171573	3300004152	Bog Forest Soil	TLLGETMTINVLPDHVMRTVFFSLAAAIVVSVGMLFLTALHP*
Ga0070731_100117904	3300005538	Surface Soil	MTSNVLRENAMRAVFFLIAAVFFVFVGMLLLTTLHP*
Ga0070732_1000019042	3300005542	Surface Soil	MTTNVLADHVMRTVFFSLAAAVVVFVGMLLLTTLHP*
Ga0066699_110202321	3300005561	Soil	MTINVLPDRGMRTVLYCLAAVIVVFVGMLLLTIHS*
Ga0066705_104243902	3300005569	Soil	MSINVLPDYMMRTGLFLLAVAIVVFAGMLLLTVL*
Ga0075023_1000448712	3300006041	Watersheds	MTINVLPDHVMRTVFFSLTAAIVVSVGMLLLTALHP*
Ga0075023_1002914412	3300006041	Watersheds	MTANVLHDRVMRTVYFSLLAAIAVFVGMLLLTTLHP*
Ga0075023_1003135181	3300006041	Watersheds	MTINVLADHVARTVFFSLAAAIIVFVGMLLLTTLHP*
Ga0075024_1003954663	3300006047	Watersheds	MTINVLHDHVVRTVFFSLAAAIIVFVGMLLLTTLHP*
Ga0075028_1002045752	3300006050	Watersheds	MTTNVLPDRVIRTVFFSLPAAIAVFVGMLLLTTLYL*
Ga0075029_1001266872	3300006052	Watersheds	MTINVLRDHMMRTVFFSLAAAIIVFIAMLLLTTV*
Ga0075029_1006787591	3300006052	Watersheds	MTINVLPDHVMRTVFFSLAAAIVVSVGMLLLTTLHS*
Ga0075029_1011777582	3300006052	Watersheds	MTINVLPDHVMRTVFFSLAAAIVVSVGMLLLTTLHP*
Ga0075026_1000476033	3300006057	Watersheds	MTINVLPDHVVRTVFFSLAAAIIVFVGMLLLTTLHP*
Ga0075026_1001773021	3300006057	Watersheds	MTINVLPDRGTRTVFYCLAAVIVVFVGMLLLTIHP*
Ga0075017_1005261781	3300006059	Watersheds	MTSNILRDYVKRTVFFSLAAAIVVFFGMLLLTTLHP*
Ga0075017_1016623712	3300006059	Watersheds	MTINVLPDHVMRTVFFSLAAAIVVSVGMLLLITLHP*
Ga0075019_103848311	3300006086	Watersheds	NKEEIMTINVLRDHMMRTVFFSLAAAIIVFIAMLLLTTV*
Ga0075018_100348172	3300006172	Watersheds	MTINVLPDHVARTVFFSLAAAIIVFVGMLLLTTLHP*
Ga0075014_1000833471	3300006174	Watersheds	GTLLGETMTINVLPDHVMRTVFFSLAAAIVVSVGMLLLITLHP*
Ga0070712_1000451412	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MTINVLPDRGMRTVFYCLTAVILVFVGMLLLTSHS*
Ga0070765_1007483662	3300006176	Soil	MTINVLPDHVMRTVFFSLAAAIVVSVGMLLSTALHP*
Ga0079222_100991604	3300006755	Agricultural Soil	MTINVLPDRGMRTVLYCLAAVIVVFVGMLLLTIHP*
Ga0079222_103662702	3300006755	Agricultural Soil	MTINVFPDRGMRTVLYCLAAVIVVFVGMLLLTIHS*
Ga0073928_100999215	3300006893	Iron-Sulfur Acid Spring	VTTNVLTDRVMRTVFLSLAAAIAVFVGMLLLTTLHP*
Ga0073928_103223943	3300006893	Iron-Sulfur Acid Spring	MTINVLPDHVMRTVFFSLAAAIVVSGGMLLLTTLHP*
Ga0075436_1012934763	3300006914	Populus Rhizosphere	EIMTINVLPDRGMRTALYCLAAVIVVFVGMLLLTIHS*
Ga0102924_10209301	3300007982	Iron-Sulfur Acid Spring	MHINVLPDHVMRTVFLSLTAAIFVLVGMLLVTTLHP*
Ga0116108_100543810	3300009519	Peatland	MHVNVLPDYVMRAVFFALTGAIFVFVAMLLFTALHP*
Ga0116108_10235453	3300009519	Peatland	MHFSNVLPDYVMRTVFFSLTGAIFVFVLMLLLTALFP*
Ga0116222_11624791	3300009521	Peatlands Soil	MAISVLPSYVMRTVVLSLPGAIAVFVGMLLLTVLHP*
Ga0116218_10213412	3300009522	Peatlands Soil	MTINVLPDYVMRTVFFSLAAAIVVFVGMFLLTTLHP*
Ga0116218_15600661	3300009522	Peatlands Soil	MTTNVLRDHMMRTVFFSLVAAIVVFIAMLLLTTV*
Ga0116225_15671182	3300009524	Peatlands Soil	FNNVLPDYVMRTVFLSLTGAIFVFVVMLLVTALHP*
Ga0116133_11193381	3300009623	Peatland	MHFSNVLPDYVMRTVFFSLTGAIFVFVLILLLTALHP*
Ga0116114_10154442	3300009630	Peatland	MHFSNVLPDYVMRTVFFSLTGAIFVFVLMLLLTALHP*
Ga0116224_103096941	3300009683	Peatlands Soil	MNINVLPDHVMRTVFLSLTAAIFVLVGMLLVTTLHF*
Ga0116216_103054781	3300009698	Peatlands Soil	INVLPDHVMRTVFFSLAAAIVVSVGMLLLTSLHP*
Ga0116216_109907041	3300009698	Peatlands Soil	MTINVLPDHVMRTVFFSLAAAIVVSVGMLFLTALHP*
Ga0116217_100709912	3300009700	Peatlands Soil	VTINDLPDYVMRAVFLSLAAAIVVFIGMLLLTIHS*
Ga0116217_101186763	3300009700	Peatlands Soil	MHFSNVLPDYVMRTVFFSLTGAIFVFVLMSLLTALFP*
Ga0116217_109585072	3300009700	Peatlands Soil	MHFNNVLPDYVMRTVFLSLTGAIFVFVVMLLVTALHP*
Ga0116219_101996971	3300009824	Peatlands Soil	MNINVLPDHVMRTVFLSLTVATFVLVGMLLVTTLHFWETHAV*
Ga0116223_100497252	3300009839	Peatlands Soil	MTIHVLPDYVLRTVFLSLAVAIVVFVGMLLLTILHP*
Ga0116223_102858301	3300009839	Peatlands Soil	HFSNVLPDYVMRTVFFSLTGAIFVFVLMLLLTALHP*
Ga0116223_103371932	3300009839	Peatlands Soil	SNVLPDYVMRTVFFSLTGAIFVFVLMLLLTALFP*
Ga0116223_103477043	3300009839	Peatlands Soil	IMTINVLPDHVMRTVFLSLTVATFVIVGMLLVTTLHF*
Ga0074044_100373543	3300010343	Bog Forest Soil	MHINVHPDHVMQTVLFSLTAAIFVFVGMLLLTTLHP*
Ga0074044_101545592	3300010343	Bog Forest Soil	MTINVLPDHVMGTVFLSLTAAIFALAGMLLLTTLHP*
Ga0074044_103683832	3300010343	Bog Forest Soil	MTSNVLRDYVMRTVFFSLAAAIVVFFGMLLLTTLHP*
Ga0136449_1009512891	3300010379	Peatlands Soil	MTTDVLPDYVMRTVFFSLTTAIVAFVGMLLLTTLRP*
Ga0136449_1010133222	3300010379	Peatlands Soil	MHVNVLPDYVMRTVFFSLTGAIFVFVVMLLLTALHP*
Ga0136449_1011161922	3300010379	Peatlands Soil	MTINILPEHVTRTVFFSLTAAIVVFFGMLFLTTLHP*
Ga0136449_1011827532	3300010379	Peatlands Soil	MTINVLPDYVMRTVFLSLAVAIVVFVGMLLLTTLHS*
Ga0136449_1017494612	3300010379	Peatlands Soil	MTINVLPDHVMRTVFLSLTVATFVLVGMLLVTTLHP*
Ga0136449_1034343722	3300010379	Peatlands Soil	YEEGIMHFNNVLPDYVMRTVFFSLTGAIFVFVGMLLLTPLHP*
Ga0134126_109965711	3300010396	Terrestrial Soil	MTINVLPDRGMRRVLYCLAAVIVVFVGMLLLTIHP*
Ga0137776_16804961	3300010937	Sediment	MTVNVIHANVMLTVFFSLAATIVVFDGMLLLTMAHP*
Ga0138573_12338602	3300011089	Peatlands Soil	MHVNVLPDYVMRAVFFSLTGAFFVFVAMLLFTALHP*
Ga0150983_102560344	3300011120	Forest Soil	TINVLSDHVVRTVFFSLAAAIIVFVGMLLLTTLHP*
Ga0150983_104777502	3300011120	Forest Soil	MTTNVLPAYLMRTVFFSLAAAIVVFVGMLLLTTLHP*
Ga0150983_106061392	3300011120	Forest Soil	VTVKDLPDYVMRAVFLSLAAAIVVVVGMLLLTAIHSS*
Ga0150983_139527862	3300011120	Forest Soil	VTTNVLHDRVMRTVYFSLLAAIAVFVGMLLLTTLHP*
Ga0150983_142604362	3300011120	Forest Soil	MTTNVLSDHVMRMVFLGLAVAIVVFVGMLVLTTLHP*
Ga0150983_150383901	3300011120	Forest Soil	TINVLPDHVMRTVFFSLGAAIVVSGGMLLLTTLHP*
Ga0150983_156016171	3300011120	Forest Soil	ETMTINVLPDHVVRTVFFSLAAAIIVFVGMLLLTTLHP*
Ga0150983_166100241	3300011120	Forest Soil	MTINVLPDHVMRTVFFSLAAAIVVSGGILLLLTTLHP*
Ga0137380_100511945	3300012206	Vadose Zone Soil	MTINVLPDRGMRTVFYCLAAVIVVFVGMLLLNDPSLETHAARTTHPA*
Ga0137376_100602366	3300012208	Vadose Zone Soil	MTINVLPDRGMRTVLYCFAAVIVVFVGMLLLTIHP*
Ga0134027_10740482	3300012364	Grasslands Soil	MTINVIPDYMTRTGFFLLAVAIVVFAGMLLLTVL*
Ga0164298_101459691	3300012955	Soil	MTINVLPDHVMRTVFFSLAAAIVVYVGMLLLTALHP*
Ga0181518_101362741	3300014156	Bog	MHFNNVLPDYVMRTVFFSLTGAIFVFVGMLLLMPLHP*
Ga0181521_100419602	3300014158	Bog	MTTNVLPDYVMRTVFFSLATAIVVFVGMLLLTTLHP*
Ga0181530_100508014	3300014159	Bog	MTTNVLPDYAIRTVFFSLAAAIVVFVGMLLLTTLHP*
Ga0181530_104281681	3300014159	Bog	MTFNVLPDHVMRMVFLSLAAAIVLAFADMLLLTTLHR*
Ga0181538_106986932	3300014162	Bog	EEGIMHFSNVLPDYVMRTVFFSLTGAIFVFVLMLLLTALFP*
Ga0181532_100410772	3300014164	Bog	MTINVLPDHVMRTVFFTLTVAVVVSIAMLLVTTLHS*
Ga0181532_102465052	3300014164	Bog	LYEEGIMHFSNVLPDYVMRTVFFSLTGAIFVFVLMLLLTALHP*
Ga0181532_107373162	3300014164	Bog	LYEEGIMHFSNVLPDYVMRTVFFSLTGAIFVFVLMLLLTALFP*
Ga0181523_101031453	3300014165	Bog	MMTINVLPDHVVMRTVFLSLAAAIVVFVGMLLLITLHP*
Ga0181523_107315482	3300014165	Bog	RKKLYEEGIMHFSNVLPDYVMRTVFFSLTGAIFVFVLILLLTALHP*
Ga0181531_106599732	3300014169	Bog	MTIKALADRVTQTVFLSLAVAIVVFAGMLLFTILHP*
Ga0181536_101393523	3300014638	Bog	EGIMHFSNVLPDYVMRTVFFSLTGAIFVFVLMLLLTALHP*
Ga0181536_102548802	3300014638	Bog	MHFSNVLPDYVMRTVFFSLTGAIFVFVGMLLLMPLHP*
Ga0132257_1028578921	3300015373	Arabidopsis Rhizosphere	EEIMTINVLPDRGMRTALYCLAAAIVVFVGMLLLTIHS*
Ga0181505_102984683	3300016750	Peatland	MHINVLSDHVMRTVFFSLTSAIFVFVGMLLLTTMLP
Ga0187818_100265294	3300017823	Freshwater Sediment	MTINVLPDRGMRTVLYCLAAVIVVFVGMLLLTIHP
Ga0187820_12975561	3300017924	Freshwater Sediment	MHFNNVLPDYVMRTVFFSLTGAIFVFVGMLLLTPLHP
Ga0187856_10137484	3300017925	Peatland	MTTNVLPDYVMRTVFFSLATAIVVFVGMLLLTTLHP
Ga0187856_10259581	3300017925	Peatland	MHVNVLPDYVMRAVFFSLTGAIFVFVAMLLFTALHP
Ga0187849_10532562	3300017929	Peatland	MHFSNVLPDYVMRTVFFSLTGAIFVFVLMLLLTALHP
Ga0187877_10255384	3300017931	Peatland	LYEEGIMHFSNVLPDYVMRTVFFSLTGAIFVFVLMLLLTALHP
Ga0187814_100056709	3300017932	Freshwater Sediment	MTINVLPDRGMRKVLYCLAAVIVVFVGMLLLTIHP
Ga0187801_102170251	3300017933	Freshwater Sediment	MTINVLPSPGMRTVLYCLAAVIVVFVGMLLLTIHP
Ga0187803_100211532	3300017934	Freshwater Sediment	MTINVLPDHVMGTVFLSLTAAIFALAGMLLLTTLHP
Ga0187848_101654012	3300017935	Peatland	MHVNVLPDYVMRAVFFALTGAIFVFVAMLLFTALHP
Ga0187808_100431373	3300017942	Freshwater Sediment	MHFNNVLPDYVMRTVFFSLTGAIFVFVVTLLLTALHP
Ga0187819_105553761	3300017943	Freshwater Sediment	MTINVLPDHVMRTVFFTLTVAVVVSIAMLLVTTLHS
Ga0187879_101772861	3300017946	Peatland	MHFTVLPDYVMRTVFLSLTGATFVFVAMLLLTALHP
Ga0187817_101773081	3300017955	Freshwater Sediment	MHINVLPDYVMRAVFLSLTGAIFVFVVTLLLTALHP
Ga0181520_105643251	3300017988	Bog	MTIKALADRVTQTVFLSLAVAIVVFAGMLLFTILHP
Ga0187891_11854531	3300017996	Peatland	MTTNVLPDYVMRTVFFSLAAAIVVFVGMLLLTTLHL
Ga0187884_100962722	3300018009	Peatland	MHFSNVLPDYVMRTVFFSLTGAIFVFVLMLLLTALFP
Ga0187873_13862842	3300018013	Peatland	HFSNVLPDYVMRTVFFSLTGAIFVFVLILLLTALHP
Ga0187860_14026022	3300018014	Peatland	YEEGIMHFSNVLPDYVMRTVFFSLTGAIFVFVLILLLTALHP
Ga0187880_11847741	3300018016	Peatland	MHVNVLPDYVMRAVFFSLTGVIFVFVTMLLFTALHP
Ga0187872_102102251	3300018017	Peatland	GIMHFSNVLPDYVMRTVFFSLTGAIFVFVLILLLTALHP
Ga0187886_12224392	3300018018	Peatland	MHFSNVLPDYVMRTVFFSLTGAIFVFVLILLLTALHP
Ga0187889_101822402	3300018023	Peatland	YEEGIMHFSNVLPDYVMRTVFFSLTGAIFVFVLMLLLTALHP
Ga0187881_101424071	3300018024	Peatland	KLYEEGIMHFSNVLPDYVMRTVFFSLTGAIFVFVLMLLLTALHP
Ga0187855_101467831	3300018038	Peatland	TINVLPDHVVMRTVFLSLAAAIVVFVGMLLLITLHP
Ga0187862_109019951	3300018040	Peatland	FSNVLPDYVMRTVFFSLTGAIFVFVLMLLLTALFP
Ga0187871_102990112	3300018042	Peatland	MMTINVLPDHVVMRTVFLSLAAAIVVFVGMLLLITLHP
Ga0184587_1002412	3300019185	Soil	MTINVLSDHVVRTVFFSLAAAIIVFVGMLLLTTLHP
Ga0184588_1181412	3300019186	Soil	MTINVLPDHVMRTVFLSLAAAIIVFVGMLLLITFHP
Ga0184588_1241522	3300019186	Soil	AVSIGAIMTTNVLHDRVMRTVYFSLLAAIAVFVGMLLLTTLHP
Ga0184584_1338441	3300019187	Soil	MTTNVLPDRVIRTVFFSLPAAIAVFVGMLLLTTLYL
Ga0184586_1352383	3300019194	Soil	LLGETMTINVLPDHVMRTVFFSLAAAIVVSGGMLLLTTLHP
Ga0193751_100943410	3300019888	Soil	MTINVLPDRGMRTVFYCLAAVIVVFLGMLLLTIHP
Ga0210407_103857562	3300020579	Soil	MTINVLPDHVVRTVFFSLAAAIIVFVGMLLLTTLHP
Ga0210407_105708702	3300020579	Soil	MHINVLPDHVMRTVFLSLTAAIFVFVGMLLVTPLHP
Ga0210403_100622382	3300020580	Soil	MTINVLPDHVVRTVFFSLAAASIVFVGMLLLTTLHP
Ga0210403_104535712	3300020580	Soil	MTTNALSDRVIRTVFFSLPAAIAVFVGMLLLTTLYL
Ga0210403_105264402	3300020580	Soil	MTTNVLHDRVMRTVYFSLLAAIAVFVGMLLLTTLHP
Ga0210403_105962502	3300020580	Soil	GETMTINVLPDHVMRTVFFSLAAAIVVSVGMLLLTALHP
Ga0210403_107860622	3300020580	Soil	MTANVLHDRVMRTVYFSLLAAIAVFVGMLLLTTLHPYETRAVRSATDARIV
Ga0210406_105201953	3300021168	Soil	MHINVLPDHVMRTVFLSLTAAIFVLVGMLLVTTLHP
Ga0210406_105751352	3300021168	Soil	MHINVLPDHVMRTVFLSLTAAIFVFVGMLLVTTLHP
Ga0210408_100326049	3300021178	Soil	MTANVLHDRVMRTVYFSLLAAIAVFVGMLLLTTLHP
Ga0210385_103598612	3300021402	Soil	MATNVLRDNVMRAVFFSIAAAFVVFVGMLLLTTLHP
Ga0210397_108444291	3300021403	Soil	MTANVLHDRVMRTVYFSLLAAIAVFVGMLLLTSLHPWETRAVRSATDARIV
Ga0210389_107901661	3300021404	Soil	MTINVLPDHVMRTVFFSLTAAIVVSVGMLLLTALHP
Ga0210402_112638962	3300021478	Soil	MTANVRHDRVMRTVYFSLLAAIAVFVGMLLLTTLHP
Ga0212123_101178611	3300022557	Iron-Sulfur Acid Spring	MAINVLRDHVMRVVFFSLAAAIVVFVGMLLLTIHNP
Ga0247552_1013141	3300023536	Soil	MTTNVLLDRVIRTVFFSLPAAIAVFVGMLLLTTLYL
Ga0224564_10439182	3300024271	Soil	VTINVRPDHVVRTVFFSLAAAIIVFVGMLLLTTLHP
Ga0209171_103523471	3300025320	Iron-Sulfur Acid Spring	GTLLGDDVTINDLPNYVMRAVFLSLAAAIVVFVGMLLLTIHP
Ga0208190_10279231	3300025473	Peatland	KLYEEGIMHFSNVLPDYVMRTVFFSLTGAIFVFVLILLLTALHP
Ga0207693_100342006	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MTINVLPDRGMRTVFYCLTAVILVFVGMLLLTSHS
Ga0208199_10345393	3300027497	Peatlands Soil	VTINDLPDYVMRAVFLSLAAAIVVFIGMLLLTIHS
Ga0208043_10738021	3300027570	Peatlands Soil	MAISVLPSYVMRTVVLSLPGAIAVFVGMLLLTVLHP
Ga0208044_10279293	3300027625	Peatlands Soil	MTINVLPDYVMRTVFFSLAAAIVVFVGMFLLTTLHP
Ga0208696_10168052	3300027696	Peatlands Soil	MHFSNVLPDYVMRTVFFSLTGAIFVFVAMLLFTALHP
Ga0208696_11967541	3300027696	Peatlands Soil	MRFNNVLPDYVMRTVFFSLTGAIFVFVGMLLLTPLHP
Ga0209772_102592582	3300027768	Bog Forest Soil	MTSNVLRDYVMRTVFFSLAAAIVVFFGMLLLTTLHP
Ga0209448_100694102	3300027783	Bog Forest Soil	MTINVLPDHVMRTVLFSLAAAIVVSVGMLLLTTLHL
Ga0209040_104914462	3300027824	Bog Forest Soil	MHFNNVLPDYVMRTVFLSLTGAIFVFVVMLLLTALHP
Ga0209580_10000004659	3300027842	Surface Soil	MTTNVLADHVMRTVFFSLAAAVVVFVGMLLLTTLHP
Ga0209517_102001852	3300027854	Peatlands Soil	MTINILPEHVTRTVFFSLTAAIVVFFGMLFLTTLHP
Ga0209579_100211194	3300027869	Surface Soil	MTSNVLRENAMRAVFFLIAAVFFVFVGMLLLTTLHP
Ga0209275_102433821	3300027884	Soil	MTINVLADHVMRTVFFSLAAAIVVSVGMLLLTCLHP
Ga0209415_100790223	3300027905	Peatlands Soil	MTINVLPDHVMRTVFFTLTVAVVLSIAMLLVTTLHS
Ga0209069_102170153	3300027915	Watersheds	MTINVLPDHVMRTVFFSLAAAIVVSVGMLLLITLHP
Ga0222749_103497851	3300029636	Soil	MTINVLPDHVMRTVFFSLAAAIVVSVGMLLLNALHP
Ga0210286_10980552	3300030597	Soil	MFFMIVLHDRVMRTVYFSLLAAIAVFVGMLLLTTLHP
Ga0316363_102721132	3300030659	Peatlands Soil	MTTDVLPDYVMRTVFFSLTTAIVAFVGMLLLTTLRP
Ga0170834_1027134223	3300031057	Forest Soil	MTTNVFPDRVIRTVFFSRPAAIAVFVGMLLLTTLYH
Ga0170823_153924783	3300031128	Forest Soil	MTTNVLPDRVIRTVFFSRPAAIAVFVGMLLLTTLYL
Ga0170820_152352613	3300031446	Forest Soil	MTINVLHDHVVRTVFFSLAAAIIVFVGMLLLTTLHP
Ga0311301_1000303854	3300032160	Peatlands Soil	MTIHVLPDYVLRTVFLSLAVAIVVFVGMLLLTILHP
Ga0311301_1006651410	3300032160	Peatlands Soil	MTINVLPDYVMRTVFLSLAVAIVVFVGMLLLTTLHS
Ga0311301_103194132	3300032160	Peatlands Soil	MHVNVLPDYVMRTVFFSLTGAIFVFVVMLLLTALHP
Ga0311301_103479862	3300032160	Peatlands Soil	MEKIMHINVLPDHVMRTVFLSLTVATFVLVGMLLVTTLHFWETHAV
Ga0311301_107100182	3300032160	Peatlands Soil	MTINVLPDYVMRTVFLSLAVAIVVFVGMLLLTVLHP
Ga0311301_110907241	3300032160	Peatlands Soil	MNINVLPDHVMRTVFLSLTAAIFVLVGMLLVTTLHF
Ga0311301_113104562	3300032160	Peatlands Soil	EEIVHFNNVLPDYVMRTVFLSLTGAIFVFVVMLLVTALHP
Ga0348332_111645563	3300032515	Plant Litter	VTINVLPDHVVRTVFFSLAAAIIVFVGMLLLTTLHP
Ga0348332_125345641	3300032515	Plant Litter	MHINVLPDHVMRTVFLSLTAAIFVFVGMLLMTTMHP
Ga0348332_127634012	3300032515	Plant Litter	MTSNVLADHVMRTVFFSLAAAVVVFVGMLLLTTLHP
Ga0315742_124596961	3300032756	Forest Soil	MTINVLPDHVMRTVFFSLAAAIVVSGGMLLLLTTLHP
Ga0335085_107162541	3300032770	Soil	MTIDVLRVHVMRTVLFSLAATLVVFVGMLLLTILHP
Ga0335081_101438156	3300032892	Soil	MTIDVLRDHVMRTVLFSLAATLVVFVGMLLLTILHP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F033207

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences