Metagenome / Metatranscriptome Family F033238

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F033238
Family Type	Metagenome / Metatranscriptome
Number of Sequences	178
Average Sequence Length	52 residues
Representative Sequence	MWGTSSPDDKLTGDLGNVIGATSIGGRRSDFFTARKLAPGNLGLLQQYRH
Number of Associated Samples	126
Number of Associated Scaffolds	177

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	12.72 %
% of genes near scaffold ends (potentially truncated)	74.16 %
% of genes from short scaffolds (< 2000 bps)	91.01 %
Associated GOLD sequencing projects	111
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.21

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (61.236 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (24.719 % of family members)
Environment Ontology (ENVO)	Unclassified (34.270 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (63.483 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.00% β-sheet: 0.00% Coil/Unstructured: 50.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.21
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.21
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 177 Family Scaffolds
PF04392	ABC_sub_bind	18.64
PF00582	Usp	2.26
PF00111	Fer2	1.69
PF03401	TctC	1.13
PF00072	Response_reg	1.13
PF13586	DDE_Tnp_1_2	1.13
PF14067	LssY_C	1.13
PF13185	GAF_2	1.13
PF03706	LPG_synthase_TM	1.13
PF00264	Tyrosinase	0.56
PF07995	GSDH	0.56
PF00239	Resolvase	0.56
PF02776	TPP_enzyme_N	0.56
PF04828	GFA	0.56
PF05869	Dam	0.56
PF13936	HTH_38	0.56
PF13683	rve_3	0.56
PF13649	Methyltransf_25	0.56
PF02530	Porin_2	0.56
PF02518	HATPase_c	0.56
PF04519	Bactofilin	0.56
PF02082	Rrf2	0.56
PF05231	MASE1	0.56
PF13340	DUF4096	0.56
PF12697	Abhydrolase_6	0.56
PF07690	MFS_1	0.56
PF00857	Isochorismatase	0.56
PF00724	Oxidored_FMN	0.56
PF01663	Phosphodiest	0.56
PF13542	HTH_Tnp_ISL3	0.56
PF01527	HTH_Tnp_1	0.56
PF13492	GAF_3	0.56
PF13924	Lipocalin_5	0.56
PF00536	SAM_1	0.56
PF12833	HTH_18	0.56
PF06776	IalB	0.56
PF01925	TauE	0.56
PF01557	FAA_hydrolase	0.56
PF13432	TPR_16	0.56
PF12680	SnoaL_2	0.56
PF01035	DNA_binding_1	0.56
PF01220	DHquinase_II	0.56
PF00375	SDF	0.56
PF00027	cNMP_binding	0.56
PF02615	Ldh_2	0.56
PF03544	TonB_C	0.56
PF07045	DUF1330	0.56
PF02371	Transposase_20	0.56
PF08388	GIIM	0.56
PF03476	MOSC_N	0.56

COG ID	Name	Functional Category	% Frequency in 177 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	18.64
COG0392	Predicted membrane flippase AglD2/YbhN, UPF0104 family	Cell wall/membrane/envelope biogenesis [M]	1.13
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	1.13
COG0042	tRNA-dihydrouridine synthase	Translation, ribosomal structure and biogenesis [J]	0.56
COG0350	DNA repair enzyme Ada (O6-methylguanine-DNA--protein-cysteine methyltransferase)	Replication, recombination and repair [L]	0.56
COG0640	DNA-binding transcriptional regulator, ArsR family	Transcription [K]	0.56
COG0642	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.56
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	0.56
COG0757	3-dehydroquinate dehydratase	Amino acid transport and metabolism [E]	0.56
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.56
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	0.56
COG1414	DNA-binding transcriptional regulator, IclR family	Transcription [K]	0.56
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.56
COG1664	Cytoskeletal protein CcmA, bactofilin family	Cytoskeleton [Z]	0.56
COG1725	DNA-binding transcriptional regulator YhcF, GntR family	Transcription [K]	0.56
COG1902	2,4-dienoyl-CoA reductase or related NADH-dependent reductase, Old Yellow Enzyme (OYE) family	Energy production and conversion [C]	0.56
COG1959	DNA-binding transcriptional regulator, IscR family	Transcription [K]	0.56
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.56
COG2055	Malate/lactate/ureidoglycolate dehydrogenase, LDH2 family	Energy production and conversion [C]	0.56
COG2133	Glucose/arabinose dehydrogenase, beta-propeller fold	Carbohydrate transport and metabolism [G]	0.56
COG2186	DNA-binding transcriptional regulator, FadR family	Transcription [K]	0.56
COG2188	DNA-binding transcriptional regulator, GntR family	Transcription [K]	0.56
COG2378	Predicted DNA-binding transcriptional regulator YobV, contains HTH and WYL domains	Transcription [K]	0.56
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.56
COG2524	Predicted transcriptional regulator, contains C-terminal CBS domains	Transcription [K]	0.56
COG3217	N-hydroxylaminopurine reductase subunit YcbX, contains MOSC domain	Defense mechanisms [V]	0.56
COG3447	Integral membrane sensor domain MASE1	Signal transduction mechanisms [T]	0.56
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.56
COG3637	Opacity protein LomR and related surface antigens	Cell wall/membrane/envelope biogenesis [M]	0.56
COG3695	Alkylated DNA nucleotide flippase Atl1, participates in nucleotide excision repair, Ada-like DNA-binding domain	Transcription [K]	0.56
COG3791	Uncharacterized conserved protein	Function unknown [S]	0.56
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.56
COG5342	Invasion protein IalB, involved in pathogenesis	General function prediction only [R]	0.56
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	0.56

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	61.24 %
Unclassified	root	N/A	38.76 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	61.24 %
Unclassified	root	N/A	38.76 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	61.24 %
Unclassified	root	N/A	38.76 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	42.13 %
Unclassified	root	N/A	38.76 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	29.21 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.12 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.76 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	12.36 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	6.18 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.56 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.56 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.56 %
Enterobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.76 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	7.87 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.49 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.69 %
Morganellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Morganellaceae	0.56 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.56 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.56 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.56 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.56 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.56 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.76 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	7.30 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.49 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.69 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.56 %
Providencia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Morganellaceae → Providencia	0.56 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	0.56 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.56 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.56 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	0.56 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.76 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.49 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	2.81 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.69 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1.12 %
unclassified Microvirga	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → unclassified Microvirga	0.56 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.56 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.56 %
Providencia stuartii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Morganellaceae → Providencia → Providencia stuartii	0.56 %
Mesorhizobium plurifarium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium plurifarium	0.56 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	0.56 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.56 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	0.56 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.76 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.49 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	2.81 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.69 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1.12 %
Bradyrhizobium sp. DOA9	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. DOA9	0.56 %
Microvirga sp. VF16	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → unclassified Microvirga → Microvirga sp. VF16	0.56 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.56 %
Providencia stuartii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Morganellaceae → Providencia → Providencia stuartii	0.56 %
Mesorhizobium plurifarium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium plurifarium	0.56 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	0.56 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.56 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	0.56 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.56 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_16510969	Not Available	1669	Open in IMG/M
2088090014\|GPIPI_17491097	Not Available	1662	Open in IMG/M
2170459003\|FZ032L002GGZTB	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	535	Open in IMG/M
2170459010\|GIO7OMY01CRE96	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	515	Open in IMG/M
3300001081\|JGI12662J13196_1003681	All Organisms → cellular organisms → Bacteria	1178	Open in IMG/M
3300001545\|JGI12630J15595_10021430	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1364	Open in IMG/M
3300003505\|JGIcombinedJ51221_10048925	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1601	Open in IMG/M
3300003505\|JGIcombinedJ51221_10194163	All Organisms → cellular organisms → Bacteria	824	Open in IMG/M
3300003505\|JGIcombinedJ51221_10195990	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	820	Open in IMG/M
3300004080\|Ga0062385_11249012	Not Available	510	Open in IMG/M
3300005332\|Ga0066388_102394000	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	957	Open in IMG/M
3300005332\|Ga0066388_106538895	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	587	Open in IMG/M
3300005332\|Ga0066388_107019536	Not Available	567	Open in IMG/M
3300005332\|Ga0066388_108115986	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	524	Open in IMG/M
3300005338\|Ga0068868_101458138	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	640	Open in IMG/M
3300005347\|Ga0070668_101790513	Not Available	565	Open in IMG/M
3300005353\|Ga0070669_101409756	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	605	Open in IMG/M
3300005435\|Ga0070714_101683492	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	620	Open in IMG/M
3300005437\|Ga0070710_11159443	Not Available	570	Open in IMG/M
3300005440\|Ga0070705_100660217	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	816	Open in IMG/M
3300005444\|Ga0070694_101261217	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	621	Open in IMG/M
3300005713\|Ga0066905_101354812	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300005764\|Ga0066903_102196056	Not Available	1064	Open in IMG/M
3300005764\|Ga0066903_102835410	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	940	Open in IMG/M
3300005937\|Ga0081455_10043252	All Organisms → cellular organisms → Bacteria	3943	Open in IMG/M
3300006163\|Ga0070715_10385780	Not Available	774	Open in IMG/M
3300006175\|Ga0070712_100345325	All Organisms → cellular organisms → Bacteria → Proteobacteria	1217	Open in IMG/M
3300006176\|Ga0070765_100631285	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1011	Open in IMG/M
3300006580\|Ga0074049_13026056	Not Available	761	Open in IMG/M
3300006881\|Ga0068865_101476217	Not Available	609	Open in IMG/M
3300006893\|Ga0073928_10085795	All Organisms → cellular organisms → Bacteria → Proteobacteria	2683	Open in IMG/M
3300009092\|Ga0105250_10520936	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300009156\|Ga0111538_10891858	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1126	Open in IMG/M
3300010043\|Ga0126380_10148540	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1497	Open in IMG/M
3300010043\|Ga0126380_10741094	Not Available	796	Open in IMG/M
3300010047\|Ga0126382_10012953	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4079	Open in IMG/M
3300010047\|Ga0126382_10498975	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	978	Open in IMG/M
3300010358\|Ga0126370_11013437	Not Available	759	Open in IMG/M
3300010358\|Ga0126370_11745182	Not Available	600	Open in IMG/M
3300010359\|Ga0126376_10876934	All Organisms → cellular organisms → Bacteria	885	Open in IMG/M
3300010362\|Ga0126377_12172759	All Organisms → cellular organisms → Bacteria → Proteobacteria	631	Open in IMG/M
3300010371\|Ga0134125_10992666	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	921	Open in IMG/M
3300010375\|Ga0105239_12387301	Not Available	616	Open in IMG/M
3300010376\|Ga0126381_103466384	All Organisms → cellular organisms → Bacteria → Proteobacteria	620	Open in IMG/M
3300010398\|Ga0126383_10568872	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1201	Open in IMG/M
3300010403\|Ga0134123_10377263	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1291	Open in IMG/M
3300011003\|Ga0138514_100001863	All Organisms → cellular organisms → Bacteria → Proteobacteria	2702	Open in IMG/M
3300011120\|Ga0150983_12780592	All Organisms → cellular organisms → Bacteria	1510	Open in IMG/M
3300012208\|Ga0137376_11542592	Not Available	555	Open in IMG/M
3300012582\|Ga0137358_10538905	Not Available	785	Open in IMG/M
3300012955\|Ga0164298_10342111	All Organisms → cellular organisms → Bacteria → Proteobacteria	944	Open in IMG/M
3300012957\|Ga0164303_10811083	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	645	Open in IMG/M
3300012961\|Ga0164302_11530939	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300012977\|Ga0134087_10484731	Not Available	619	Open in IMG/M
3300012989\|Ga0164305_12170881	Not Available	510	Open in IMG/M
3300013102\|Ga0157371_11464207	Not Available	532	Open in IMG/M
3300014745\|Ga0157377_10252427	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1144	Open in IMG/M
3300015373\|Ga0132257_102344224	All Organisms → cellular organisms → Bacteria → Proteobacteria	692	Open in IMG/M
3300016270\|Ga0182036_10153628	All Organisms → cellular organisms → Bacteria	1642	Open in IMG/M
3300016294\|Ga0182041_10390824	Not Available	1181	Open in IMG/M
3300016294\|Ga0182041_10558502	All Organisms → cellular organisms → Bacteria → Proteobacteria	1001	Open in IMG/M
3300016294\|Ga0182041_11269603	Not Available	673	Open in IMG/M
3300016294\|Ga0182041_11778357	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300016319\|Ga0182033_10111072	Not Available	2039	Open in IMG/M
3300016319\|Ga0182033_10384523	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1182	Open in IMG/M
3300016319\|Ga0182033_10871556	All Organisms → cellular organisms → Bacteria	796	Open in IMG/M
3300016319\|Ga0182033_11970784	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → unclassified Microvirga → Microvirga sp. VF16	532	Open in IMG/M
3300016341\|Ga0182035_10396395	Not Available	1159	Open in IMG/M
3300016341\|Ga0182035_10861418	All Organisms → cellular organisms → Bacteria	798	Open in IMG/M
3300016357\|Ga0182032_10441376	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1060	Open in IMG/M
3300016387\|Ga0182040_10425228	Not Available	1047	Open in IMG/M
3300016387\|Ga0182040_10542057	Not Available	935	Open in IMG/M
3300016387\|Ga0182040_10763147	All Organisms → cellular organisms → Bacteria → Proteobacteria	795	Open in IMG/M
3300016404\|Ga0182037_11597006	Not Available	580	Open in IMG/M
3300016422\|Ga0182039_10547990	Not Available	1005	Open in IMG/M
3300016422\|Ga0182039_11099564	Not Available	716	Open in IMG/M
3300016445\|Ga0182038_10414515	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1132	Open in IMG/M
3300016445\|Ga0182038_11122302	Not Available	699	Open in IMG/M
3300016445\|Ga0182038_11661777	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300016445\|Ga0182038_12149063	Not Available	506	Open in IMG/M
3300018088\|Ga0187771_11061523	Not Available	687	Open in IMG/M
3300019890\|Ga0193728_1241771	All Organisms → cellular organisms → Bacteria	729	Open in IMG/M
3300020579\|Ga0210407_10229906	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1443	Open in IMG/M
3300020579\|Ga0210407_10678148	All Organisms → cellular organisms → Bacteria → Proteobacteria	800	Open in IMG/M
3300020579\|Ga0210407_11209765	Not Available	568	Open in IMG/M
3300021168\|Ga0210406_10346474	Not Available	1199	Open in IMG/M
3300021168\|Ga0210406_10622151	All Organisms → cellular organisms → Bacteria → Proteobacteria	840	Open in IMG/M
3300021168\|Ga0210406_11137023	Not Available	572	Open in IMG/M
3300021170\|Ga0210400_10117582	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2119	Open in IMG/M
3300021170\|Ga0210400_10202337	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1615	Open in IMG/M
3300021178\|Ga0210408_10191205	All Organisms → cellular organisms → Bacteria	1626	Open in IMG/M
3300021178\|Ga0210408_10191205	All Organisms → cellular organisms → Bacteria	1626	Open in IMG/M
3300021401\|Ga0210393_11021477	Not Available	669	Open in IMG/M
3300021432\|Ga0210384_10194070	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1825	Open in IMG/M
3300021432\|Ga0210384_11487772	Not Available	582	Open in IMG/M
3300021475\|Ga0210392_10905460	All Organisms → cellular organisms → Bacteria	660	Open in IMG/M
3300021475\|Ga0210392_11008460	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300021479\|Ga0210410_10081542	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2844	Open in IMG/M
3300021479\|Ga0210410_10359874	All Organisms → cellular organisms → Bacteria	1304	Open in IMG/M
3300021479\|Ga0210410_11014452	Not Available	719	Open in IMG/M
3300022527\|Ga0242664_1096428	Not Available	602	Open in IMG/M
3300022557\|Ga0212123_10084044	All Organisms → cellular organisms → Bacteria → Proteobacteria	2672	Open in IMG/M
3300025905\|Ga0207685_10033440	All Organisms → cellular organisms → Bacteria → Proteobacteria	1858	Open in IMG/M
3300025915\|Ga0207693_10268728	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1336	Open in IMG/M
3300025915\|Ga0207693_11097020	Not Available	605	Open in IMG/M
3300025915\|Ga0207693_11377821	Not Available	524	Open in IMG/M
3300025926\|Ga0207659_10394700	All Organisms → cellular organisms → Bacteria	1156	Open in IMG/M
3300025929\|Ga0207664_11295560	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	648	Open in IMG/M
3300025931\|Ga0207644_10657940	All Organisms → cellular organisms → Bacteria	872	Open in IMG/M
3300025932\|Ga0207690_10558597	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	931	Open in IMG/M
3300025939\|Ga0207665_10612146	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	851	Open in IMG/M
3300026481\|Ga0257155_1069157	Not Available	567	Open in IMG/M
3300026998\|Ga0208369_1006958	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1007	Open in IMG/M
3300027073\|Ga0208366_1025104	All Organisms → cellular organisms → Bacteria → Proteobacteria	659	Open in IMG/M
3300027074\|Ga0208092_108294	Not Available	636	Open in IMG/M
3300027095\|Ga0208606_100118	All Organisms → cellular organisms → Bacteria → Proteobacteria	2259	Open in IMG/M
3300027537\|Ga0209419_1114145	Not Available	538	Open in IMG/M
3300027603\|Ga0209331_1014088	Not Available	2081	Open in IMG/M
3300027610\|Ga0209528_1016401	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1619	Open in IMG/M
3300027610\|Ga0209528_1039389	Not Available	1047	Open in IMG/M
3300027633\|Ga0208988_1109011	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	684	Open in IMG/M
3300027635\|Ga0209625_1027444	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1266	Open in IMG/M
3300027651\|Ga0209217_1176255	Not Available	584	Open in IMG/M
3300027681\|Ga0208991_1134996	Not Available	732	Open in IMG/M
3300027727\|Ga0209328_10080005	Not Available	999	Open in IMG/M
3300028047\|Ga0209526_10395499	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	918	Open in IMG/M
3300028047\|Ga0209526_10751246	Not Available	609	Open in IMG/M
3300028381\|Ga0268264_11735974	All Organisms → cellular organisms → Bacteria → Proteobacteria	634	Open in IMG/M
3300030844\|Ga0075377_11693038	Not Available	664	Open in IMG/M
3300030973\|Ga0075395_11330774	Not Available	507	Open in IMG/M
3300030991\|Ga0073994_12203868	Not Available	556	Open in IMG/M
3300031231\|Ga0170824_110666573	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300031231\|Ga0170824_122644163	All Organisms → cellular organisms → Bacteria → Proteobacteria	1087	Open in IMG/M
3300031446\|Ga0170820_11472823	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300031446\|Ga0170820_16566118	All Organisms → cellular organisms → Bacteria → Proteobacteria	822	Open in IMG/M
3300031561\|Ga0318528_10440534	Not Available	699	Open in IMG/M
3300031573\|Ga0310915_10105170	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1912	Open in IMG/M
3300031668\|Ga0318542_10553677	Not Available	599	Open in IMG/M
3300031682\|Ga0318560_10583747	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300031719\|Ga0306917_10389540	Not Available	1087	Open in IMG/M
3300031719\|Ga0306917_10540331	Not Available	916	Open in IMG/M
3300031720\|Ga0307469_10280470	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium plurifarium	1360	Open in IMG/M
3300031744\|Ga0306918_10857298	All Organisms → cellular organisms → Bacteria	708	Open in IMG/M
3300031771\|Ga0318546_11051681	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300031771\|Ga0318546_11150045	Not Available	545	Open in IMG/M
3300031780\|Ga0318508_1191227	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	585	Open in IMG/M
3300031797\|Ga0318550_10113569	All Organisms → cellular organisms → Bacteria	1284	Open in IMG/M
3300031798\|Ga0318523_10691545	Not Available	500	Open in IMG/M
3300031890\|Ga0306925_10301122	All Organisms → cellular organisms → Bacteria → Proteobacteria	1725	Open in IMG/M
3300031893\|Ga0318536_10580433	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300031910\|Ga0306923_11942971	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300031912\|Ga0306921_10849981	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1039	Open in IMG/M
3300031912\|Ga0306921_11792113	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	660	Open in IMG/M
3300031912\|Ga0306921_11937756	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Morganellaceae → Providencia → Providencia stuartii	629	Open in IMG/M
3300031942\|Ga0310916_10274033	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	1425	Open in IMG/M
3300031947\|Ga0310909_10491879	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1029	Open in IMG/M
3300031947\|Ga0310909_11056189	All Organisms → cellular organisms → Bacteria	661	Open in IMG/M
3300031947\|Ga0310909_11474612	All Organisms → cellular organisms → Bacteria → Proteobacteria	542	Open in IMG/M
3300031954\|Ga0306926_11602828	All Organisms → cellular organisms → Bacteria	747	Open in IMG/M
3300031954\|Ga0306926_12310894	Not Available	595	Open in IMG/M
3300031959\|Ga0318530_10012129	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. DOA9	2784	Open in IMG/M
3300032001\|Ga0306922_11495693	Not Available	675	Open in IMG/M
3300032010\|Ga0318569_10163247	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1028	Open in IMG/M
3300032025\|Ga0318507_10236007	Not Available	792	Open in IMG/M
3300032035\|Ga0310911_10522439	Not Available	688	Open in IMG/M
3300032043\|Ga0318556_10588340	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300032044\|Ga0318558_10448947	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	643	Open in IMG/M
3300032054\|Ga0318570_10050992	Not Available	1718	Open in IMG/M
3300032076\|Ga0306924_10547904	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1313	Open in IMG/M
3300032180\|Ga0307471_100311892	All Organisms → cellular organisms → Bacteria	1665	Open in IMG/M
3300032261\|Ga0306920_100618145	All Organisms → cellular organisms → Bacteria → Proteobacteria	1602	Open in IMG/M
3300032261\|Ga0306920_100654238	Not Available	1552	Open in IMG/M
3300032261\|Ga0306920_103055834	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	630	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.57%
Host-Associated	Host-Associated	8.43%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	89.89%
Plants	Host-Associated → Plants	8.43%
Aquatic	Environmental → Aquatic	1.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	89.33%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.62%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.81%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.12%
Freshwater	Environmental → Aquatic → Freshwater	0.56%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.56%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	65.73%
Loam	Environmental → Terrestrial → Soil → Loam	23.03%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.25%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.81%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.81%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.12%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.56%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.56%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.56%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.56%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	50.56%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	16.29%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.74%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.25%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.25%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.81%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.12%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.56%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.56%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.56%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.56%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	24.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	22.47%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	11.80%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.62%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.93%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.93%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.25%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.69%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.12%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.12%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.12%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.12%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	1.12%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.12%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.12%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.12%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.56%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.56%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.56%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.56%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.56%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.56%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.56%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.56%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.56%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.56%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.56%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.56%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.56%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2170459003	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect MP BIO 1O1 lysis 0-21cm	Environmental	Open in IMG/M
2170459010	Grass soil microbial communities from Rothamsted Park, UK - December 2009 direct MP BIO1O1 lysis 0-9cm (no DNA from 10 to 21cm!!!)	Environmental	Open in IMG/M
3300001081	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M3	Environmental	Open in IMG/M
3300001545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006580	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011003	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022527	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026481	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-19-A	Environmental	Open in IMG/M
3300026998	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF046 (SPAdes)	Environmental	Open in IMG/M
3300027073	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF010 (SPAdes)	Environmental	Open in IMG/M
3300027074	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF014 (SPAdes)	Environmental	Open in IMG/M
3300027095	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF020 (SPAdes)	Environmental	Open in IMG/M
3300027537	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027603	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027610	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027633	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027635	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027681	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027727	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300030844	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA11 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030973	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FB6 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030991	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_02405290	2088090014	Soil	FRVKMWGTSSPDDKLTGDLGNVIEATESGDRQLIRVTAEKLSPDNFRLLQQYLPGVAITC
GPIPI_01058400	2088090014	Soil	MWGTSSPDDKLTGDLGNVIEATESGDRQLIRVTAEKLSPDNFRLLQ
E4A_00522100	2170459003	Grass Soil	MWGTSSPDDKLTGDLGNVIGATSIGGRRSDFFTARKLAPGNLGLLQQYRH
F62_10326830	2170459010	Grass Soil	MWGTSSPEDKLTGDLGNVIEATSIGGRRSVFFTAGKLAPGNLGLLQQYLPDPDAPA
JGI12662J13196_10036811	3300001081	Forest Soil	VGASSPEDKLAGDLGNVIEATSTGGRRSDFFTAEKLAPGNLGLLQQYRH
JGI12630J15595_100214301	3300001545	Forest Soil	MWGTSSPEDKLTGDLGNVIEATSIGGRGSDFFTAEKLAPGNLGLLQQYRHEREVLTGATNIRCLR*
JGIcombinedJ51221_100489251	3300003505	Forest Soil	VKMWGTSSPEDKLAGDLGNVIEATSNGGRRSDFSTAEKLAPGNLGLLQQDLPLADSCSAIEV*
JGIcombinedJ51221_101941632	3300003505	Forest Soil	MWGTSLPEDKFAGDLGNVIEATSIGGRLSDFFTARKLAPGNLGLLQQYLP*
JGIcombinedJ51221_101959901	3300003505	Forest Soil	MWGTSSPDDKLTGDLGNVIEATQIGGRRSDRLMAGKLSPGNFGLLQQYRHKADISS
Ga0062385_112490122	3300004080	Bog Forest Soil	MWGTSLPEDKLAGNLGNVSEATSIGDRRSDFFAAGKLTPGSLGLFQQHRS
Ga0066388_1023940002	3300005332	Tropical Forest Soil	MWGTSSPEDKLAGDLGNAIEATSIGGCRSDFFTAEKLAAGNLGLLQQYLPVAT*
Ga0066388_1065388952	3300005332	Tropical Forest Soil	HVNMWGTSLSEEKLAGDPGNLIEATLIGGCRSDFFTAGK*
Ga0066388_1070195362	3300005332	Tropical Forest Soil	RDFRAKMWGTSSPSVKLADDLGNAIEGTRIGGRRSDFLTAGKLAPGNLGLLQQYRH*
Ga0066388_1081159862	3300005332	Tropical Forest Soil	LADDLGNAIEDTRISGRRSDFFTAGKLAPGNLGLLQQYRQLADRTLR*
Ga0068868_1014581382	3300005338	Miscanthus Rhizosphere	MWGTSSPDDKLTGDLGNVIEATESGDRQLIRVTAEKLSPDNFRLLQQYRHSPAVQ*
Ga0070668_1017905131	3300005347	Switchgrass Rhizosphere	MWGTSSPDDKLTVVLGNLIEATKIAGPQSDRLMARKLSPGNFGLLQQYRHFSDETISLK*
Ga0070669_1014097562	3300005353	Switchgrass Rhizosphere	MWGTSSPDDKLTGDLGNVIEATESGDRQLIRVTAEKLSPDNFRLLQQYLPQADICGAA*
Ga0070714_1016834921	3300005435	Agricultural Soil	RVKMWGTSSPEDKLAGDLGNVIEATSIGGRRSDFFTARKLAPGNLGLLQQYRHIAGKK*
Ga0070710_111594431	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	KLTGDFGSVIEISQSGGRRLVHVLAGKLSSGNFGLLQQYRH*
Ga0070705_1006602172	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MWGTSSPDDKLTGDLGNVIEATESGDRQLIRVTAEKLSPDNFRLLQQYRH*
Ga0070694_1012612171	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MWGTSSPDDKLTGDLGNVIEATESGDRQLIRVTAEKLSPDNFRLLQQYLP*
Ga0066905_1013548122	3300005713	Tropical Forest Soil	CPGDFHVNMWGTSSSEEKLAGDPGNVIEATSIGGRRSDFFTAGKLAPGNFGLLQQYLP*
Ga0066903_1021960562	3300005764	Tropical Forest Soil	MWGTSSPNDKLADDLGNAIEGTRISGRRSDFFRTEKLAPDNLGLLQQ
Ga0066903_1028354102	3300005764	Tropical Forest Soil	LCKDVEDLIPDDKLTGDLGNVIEVTQIGGRRSDRLMARKLSSSNFGLLQQYLP*
Ga0081455_100432524	3300005937	Tabebuia Heterophylla Rhizosphere	MWGTSLSEEKLAGDPGNVIEATSIGGRRSDFFTAGKLAPGNFGL
Ga0070715_103857802	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MWGTSSPEDKLAGDLGNVIEATSTGGRRLDFFTAENLAPGNLGLLQQYLPTAN*
Ga0070712_1003453251	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	EDKLAGDLGNVIEATSTGGRRSDFFTAEKLAPGNLGLLQQYRHDPELLGCASEFRLSR*
Ga0070765_1006312852	3300006176	Soil	MWGASSPDDKLTGDLPNEIEATQIGGFRSDRVIAGKLAPGSFGLLQQYRHEAGG*
Ga0074049_130260561	3300006580	Soil	MWGTSSPEDKLTGDLGNVIEATSIGGRRSDFFTAGKLAKGNFGLLQQYLPQADSCSAT
Ga0068865_1014762172	3300006881	Miscanthus Rhizosphere	MWGTSSPDDKLTGDLGNVIEATESGDRQLIRVTAEKLSPDNFRLLQQYRS*
Ga0073928_100857951	3300006893	Iron-Sulfur Acid Spring	DFRVKMWGTSSPDEKLAGDLGNVLEASSTGGRRSDFSTAEKLAPGNLGLLQQYLPQAD*
Ga0105250_105209361	3300009092	Switchgrass Rhizosphere	MWGTSSPDDKLTVVLGNLIEATKIAGPQSDRLMARKLSPGNFGLLQQYRHDSDLSQCSGMSAA
Ga0111538_108918582	3300009156	Populus Rhizosphere	MWGTSSSEEKLAGDPGNVIEATSIGGRRSDFFTAGKLTPGNFGLLQQYLP*
Ga0126380_101485403	3300010043	Tropical Forest Soil	RDFHVKMWGTSSPDDKLTGDLGNAFEAAEIGGRWSDRLLAVKLSSGDFGLLQQYPLKAEVNSEHL*
Ga0126380_107410942	3300010043	Tropical Forest Soil	RDFHVKMWGTSSPDDKLTGDLGNAFEAAEIGGRWSDRLLAGKLSSGDFGLLQQYLP*
Ga0126382_100129533	3300010047	Tropical Forest Soil	MWGTSSPDDKLTGDLGNAFEAAEIGGRWSDRLLAVKLSSGDFGLLQQYPLKAEVNSEHL*
Ga0126382_104989752	3300010047	Tropical Forest Soil	MWGTASSEEKLAGDPGNVIEATSIGGRRSDFFTAGKLAPGNFGLL
Ga0126370_110134372	3300010358	Tropical Forest Soil	MWGTSSPVDKLADDLGNAIEGTRISGRRSDFLTAGKLAPGNSGLLQQYRCAQSGIVT
Ga0126370_117451822	3300010358	Tropical Forest Soil	WGTSSPDDKLTGDLGNVIEAAQTGVLRSDRLTVRKSSPGNFGLLQHNLPIPDSSSAEL*
Ga0126376_108769341	3300010359	Tropical Forest Soil	MRGTSSPEDKLTGDLGNVIEVTESGDRQLIRVTAGKLLADNF
Ga0126377_121727591	3300010362	Tropical Forest Soil	KLAGDPGNVIEATSIGGRRSDFFTAGKLAPGNFGLLQQYRHI*
Ga0134125_109926661	3300010371	Terrestrial Soil	MWGTSSPDDKLMGDLGSVIEAIEIGDLRSDRPIAGKLSPSNFGLLQQNR
Ga0105239_123873012	3300010375	Corn Rhizosphere	MWGTSSPDDKLTGDLGNVIEATESGDRQLIRVTAEKLSPDNFRLLQQYRH
Ga0126381_1034663841	3300010376	Tropical Forest Soil	MWGTSSPDDKLMGDLGNVIGVTQIGGRQSDRLMAGKLSPSNFGLLQQYRHFS
Ga0126383_105688721	3300010398	Tropical Forest Soil	MWGTSSSEEKLAGDPGNVIEATSIGGRWSEFFTAGKLAPGNFGL
Ga0134123_103772631	3300010403	Terrestrial Soil	MWGTSSPDDNIPGDLGNVIEATESGDRQLIRVTAQKLSPDNFRLLNQYLHKGTSR
Ga0138514_1000018634	3300011003	Soil	MWGTSSPEGKLAGDLGNVIEATSTGGRRSDFFTAEKLAPGNLRLLQQYRHEHEVLTRAANVG*
Ga0150983_127805922	3300011120	Forest Soil	MWGTSSPEDKLAGDLGNVIEATSNGGRRSDFFTAEKLAPGNLGLLQQNLPKGD*
Ga0137376_115425921	3300012208	Vadose Zone Soil	SSPNDKLTGDLGNAIEATQIGRRSYRLRAGKLSPGNSGLLQQYLPAAEEGSN*
Ga0137358_105389051	3300012582	Vadose Zone Soil	MWGTSSSNDKLTDDFGNVIETISIAGRGSDCLTAGKLAPGNFWLLQPG
Ga0164298_103421112	3300012955	Soil	MWGISSCDDKLTGDLGKVIEATRIGGHRSDRILAGKLSPGNLGLLQQNRHFSV
Ga0164303_108110831	3300012957	Soil	TSLPEDKLAGDLGNVIGATSIDGRRSDFFTARKLAPGNLGLLQQYRHIAGRK*
Ga0164302_115309391	3300012961	Soil	MWGTSLPEDKLPGDLGNVIEATPNQQSSVRFFTAGKLAPSSLGLFQQH*
Ga0134087_104847311	3300012977	Grasslands Soil	MWGTSSPDDKLTGDLGNAIEATQIGGRQSDRLMAEKSSPSNFGVLQQY
Ga0164305_121708812	3300012989	Soil	VKMWGTSSPDDKLTGDIGNMIEATESGDRQLICVTAKKLLPDNFRLLQQYLPIAT*
Ga0157371_114642072	3300013102	Corn Rhizosphere	MWGTSSPDDKLTGDLGNVIEATESGDRQLIRVTAEKLSPDNFRLLQQYRHL*
Ga0157377_102524272	3300014745	Miscanthus Rhizosphere	MWGTSSPDDKLTGDLGNVIEATESGDRQLIRVTAEKLSPDNFRLLQQYRPICDISTQFLL
Ga0132257_1023442242	3300015373	Arabidopsis Rhizosphere	MWGTSLSEEKLAGDPGNVIEATSIGGRRPGFFTAGKLAPGNF*
Ga0182036_101536284	3300016270	Soil	MWGTSSPDDKLTGDLGNVIEAAQIGVRRSDRLTDEKSSPGNFGLLQQ
Ga0182041_103908241	3300016294	Soil	SSPDNKVAGDLGNVIEATSNGRSSVEFFKAGKLAPGNLRLLQQYQH
Ga0182041_105585022	3300016294	Soil	WGTSSPDDKLADDLGNAIEGTRISGRRWIFLTAEKLAPDNLGLLQQYRHKAA
Ga0182041_112696031	3300016294	Soil	MWGTSSPVDKLADDLGTAIEGTRISGRRSDFFTAGKLAPGNLGLLQQYRHKAA
Ga0182041_117783571	3300016294	Soil	MRGTSLSEDKLAGDRGNVIEATSIGGRWLDFFTAGKLAPGNLG
Ga0182033_101110721	3300016319	Soil	MWGTSLPDDKLADDLGNVIEGTRISGRRSDFFRTEKLAPENLGLLQQYLP
Ga0182033_103845232	3300016319	Soil	KLTDDLRNAIEGTRISGRRWSFLTAEKLAPSDLGLLQQYLPLAD
Ga0182033_108715561	3300016319	Soil	MWGTSSPDDKLADDLGNAIEGARISGRRSDFSLTGKLAPGNSRLLQQNRHEADL
Ga0182033_119707841	3300016319	Soil	MWGTSSPDDKLTGDLGSVIETTQIGGRRSDRLMAGKLSPGNFGLLQQYRHKAD
Ga0182035_103963951	3300016341	Soil	MWGTSSPEDKLTDDLGNVIEAASTGGRRSDFFTAEKLAPGNLGLLQQY
Ga0182035_104129302	3300016341	Soil	MWGASSLADKLAGDLGNVIEATQIGGCRSDRLMAGKLSPANFGLLQQYRHERELPERTIKVG
Ga0182035_108614181	3300016341	Soil	FGRTRDFRVKMWGTSSPDDKLAGDPRNAIEGTRISGCRWIFLTAEKLAPSDLGLLQQYLP
Ga0182032_104413761	3300016357	Soil	RAKMWGTSSPNDKLADDLGNAIERTRISGRRSDFLTAGKLAPGNLGLLQQNLP
Ga0182040_104252281	3300016387	Soil	MWGTSALDDKLADDLGNAIESTRIRGRRSDFFTAGKLAPGNLGLLQQYRHSAAH
Ga0182040_105420571	3300016387	Soil	MWGTSSPDHKLAGDLGNVIEATSIGDRRSDFFTAEKLAPSNLGLLQQYRHKLW
Ga0182040_107631471	3300016387	Soil	VGDLIADDKLTGDLGNVIEARQSGGRRLVRVMAGKLSPGNFRLLQQY
Ga0182037_115970062	3300016404	Soil	MWGTSSPDDKLTGDLGNVIEAAQIGVRRSDRLTTRKTSQANFGVLQQY
Ga0182039_105479901	3300016422	Soil	MWGTSLSEDKLAGDLGNVIEGTSISGRRSDFFAAEKLTPSYLGLLQQYRH
Ga0182039_110995642	3300016422	Soil	MWGSSSPDDKLTGDRGNVIEAAQIGVRRSDRLTDEKSSPGNFGLLQQYHHVAD
Ga0182038_104145153	3300016445	Soil	DFRVKMWGTSSPDDKLTGDLGSVIETTQIGGRRSDRLMAGKISPGNFGLLQQYRPRGGIVKLV
Ga0182038_111223022	3300016445	Soil	GDLGNVIEATSIGDRRSDFFTAEKLAPSNLGLLQQYRHKLWMQECPP
Ga0182038_116617772	3300016445	Soil	WGTSSPDDKLTGDLGNAFEAAETGGRWSDRLLAGKLSSGDFGLLQQYRPTAEVSG
Ga0182038_121490631	3300016445	Soil	MRGTSSPDEKLTYDLGNAIEATQIGGGRTDRLSAGKLSPGNFRLLQQYRHWADEPACPRSRRVLEGKRTYL
Ga0187771_110615231	3300018088	Tropical Peatland	MWEASLPEDKLAGDLGNVIEATSIRRSSVSFFEAGKLAPGNLGLFQQHRPFPDIP
Ga0193729_10647121	3300019887	Soil	MWGTSLPEDKLGDLGNVIEATSIGVRRSDFFTARKLAPGNLGLLQQYLPKPDSCTAANKPFFSG
Ga0193728_10791241	3300019890	Soil	MWGTSLPEDKLGDLGNVIEATSIGVRRSDFFTARKLAPGNLGLLQQYLPKPDSCTAANKPFFLDA
Ga0193728_12417712	3300019890	Soil	MWGTSSPEDKLAGDLGNVIEATSTGGRRSDFFTAEKLAPGKFGTFAT
Ga0210407_102299061	3300020579	Soil	MWGTSLPEDKLAGGLGNVIGATSIGGRRSDFFTARKLAPGNLGLLQQYR
Ga0210407_106781482	3300020579	Soil	TSLPEDKVAGDLGNVIGATSIGGRRSDFFTARKLAPGNLGLLQQYRHEREVLTRAANVG
Ga0210407_112097652	3300020579	Soil	MWGTSLPEDKFAGDLGNVIEATSIGGRLSDFFTARKLAPGNLGLLQQYLP
Ga0210406_103464741	3300021168	Soil	MWGTSSPEDKLAGDLGNVIEATSNGGRRSDFFTAEKLAPGNLGLLQQNRHLASH
Ga0210406_106221512	3300021168	Soil	TSLRDDKRAGDLGNVIGAASIGGRRSDFFTARKLAPGNLGLLQQNRHMAE
Ga0210406_111370231	3300021168	Soil	WGTSSPEDKLTGDLGNVIEATSIGDRRSDFFTAGKLAPGNLGLLPQYRPQAD
Ga0210400_101175821	3300021170	Soil	MWGTSLPEDKVAGDLGNVIGATSIGGRRSDFFTARKLAPGNLGLLQQY
Ga0210400_102023371	3300021170	Soil	MWGTSLPEDKFAGGLGNVIGATSIGGRRSDFFTARKLAPGNLGLLQQ
Ga0210408_101912051	3300021178	Soil	MWGTSSLEDKLAGELGNVIGAISIDGRRSDFFTARKLAPGNLGLLQQYRHIA
Ga0210408_101912053	3300021178	Soil	DKLTGDLGNVIEATSIGGRRSDFFTAGKLAPGNLGLLQQYRHKV
Ga0210393_110214771	3300021401	Soil	MWGTSSPEDKLTGDLGNVIEATSIGGRRSDFFTSGKLAPGN
Ga0210384_101940701	3300021432	Soil	KLAGDLDNVIEATSIGGRRSDFFTARKLAPGNLGLLQQYLPGADICSAAKSTN
Ga0210384_114877722	3300021432	Soil	MWGTSLRDDKRAGDLGNVIGAASIGGRRSDFFTARKLAPGNLGLLQQNRHMAE
Ga0210392_109054601	3300021475	Soil	MWGTSLREDKLAGDLGNVIEATSIRGRRSDFFTAGKLAPGHLGLLQQYRHEV
Ga0210392_110084601	3300021475	Soil	MWGTSSPEDKLTGDLGNVIEATSIGDRRSDFFTTGKLA
Ga0210410_100815423	3300021479	Soil	MWGTSSPEDKLAGDLGNVIEATSNGGRRSDFFTAEKLALGNLGLLQQNLP
Ga0210410_103598742	3300021479	Soil	MWGTSLPEDKFAGDLGNVIEATSIGGRRSDFFTARKLAPGNLGLLQQYRH
Ga0210410_110144521	3300021479	Soil	MWGTSLPEDKLAGDLGNVIGATLIGGRRSDFFTARKLAPGNLGLLQQYLP
Ga0242664_10964281	3300022527	Soil	MWGTSSPEDKLAGDLGNVIEATSNGGRRSDFFTAEKLAPGHLGLLQQYRHHPEALGCANEFCLLRCCGLDL
Ga0212123_100840441	3300022557	Iron-Sulfur Acid Spring	KMWGTSSPDEKLAGDLGNVLEASSTGGRRSDFSTAEKLAPGNLGLLQQYLPQAD
Ga0207685_100334403	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MWGTSLREDKLAGDLGNVIEATSIRGRRSDFFTAGKLAPGHLGLLQLPQPDS
Ga0207693_102687281	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MWGTSLPEDKLAGGLGNVIGATSIGGRRSDFFTARKLAPGNLGLLQQRRHE
Ga0207693_110970201	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	SSPEGKLAGDLGNVIEATSTGGRRSGFFTAEKLAPGNLGLLQQYRHKV
Ga0207693_113778211	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	LWGASSPEDKLAGDLGNVIEATSPGGRRSDFFTAEKLAPGNLRLLQQ
Ga0207659_103947002	3300025926	Miscanthus Rhizosphere	MWGTSSPDDKLTGDLGNVIEATESGDRQLIRVTAEKLSPDNFRLLQQYR
Ga0207664_112955602	3300025929	Agricultural Soil	EDKLAGDLDNVIEATSIGGRRSDFFTARKLAPGNLGLLQQYRHIAGKK
Ga0207644_106579402	3300025931	Switchgrass Rhizosphere	MWGTSSPDDKLTGDLGNVIEATESGDRQLIRVTAEKLSPDNFRLLQQYRHFSDVGKC
Ga0207690_105585972	3300025932	Corn Rhizosphere	DKLTGDLGNVIEATESGDRQLIRVTAEKLSPDNFRLLQQYRHISDKSRLPT
Ga0207665_106121461	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MWGTSSPDDKLTGDLGNVIEATESGDRQLIRVTAEKLSPDNFRLLQQY
Ga0257155_10691572	3300026481	Soil	MWGTSLPEDKLAGDLGNVIGATSIGGRRSDFFTARKLAPGNLGLLQQYRHKGEVLTRAANVG
Ga0208369_10069582	3300026998	Forest Soil	MWGTSSPEDKLAGDLGNVIEATSNGGRRSDFFTAEKLAPGNLGLLQQYRHDPEALGCANRFR
Ga0208366_10251042	3300027073	Forest Soil	MWGTSSPDDKLTGDLTNVIEAISIYDRGSDCLAAGKLAPGNLGLFQQHRP
Ga0208092_1082941	3300027074	Forest Soil	MWGTSSPEDKLAGDLGNVIEATSTGGRRSDFFTARKLAPGNLGLLQQNRHMAE
Ga0208606_1001181	3300027095	Forest Soil	MWRTSLPEDKLAGDLGNVIEATSTGGRRSDFFTAEKLAPGNLGLLQQYL
Ga0209419_11141451	3300027537	Forest Soil	MWGTSSPDDKLTGDLGNVIEATQIGGRRSDRLMAGKLSPGNFGLLQQYRHKADISSCLLVCPLS
Ga0209331_10140881	3300027603	Forest Soil	MWGTSSPEDKLAGDLGNVIEATSTGGRRSDFFTAEKLAPGNLGLLQQYLPGADSC
Ga0209528_10164013	3300027610	Forest Soil	MWGTSSPEDKLTGDLGNVIEATSIGGRGSDFFTAEKLAPGNLGLLQQYRHERE
Ga0209528_10393891	3300027610	Forest Soil	MWGTSLPADKLAGDLGNVIEATSIGGRRSDFFTAGKLAPGNLGLFQQH
Ga0208988_11090111	3300027633	Forest Soil	DILAGDLGNVIGATSIGGRRSDFFTARKLAPGNLGLLQQYRHEV
Ga0209625_10274442	3300027635	Forest Soil	MWGTSLPEEKLAGDLGNVIGATSIGGRRSDFFTARKLAPGNLGLLQQYRHEREVLTRAANVG
Ga0209217_11762551	3300027651	Forest Soil	MMWGTSSPDDKLTGDLGNVIEAMSIDGRGSDCLAAGKLAPCNFGLLQQYLPL
Ga0208991_11349961	3300027681	Forest Soil	MWGTSSPEDKLAGDLGNVIEATSTGGRRSDFFTAEKLAPGNLGLLQQYRHKHEVPICTTNVC
Ga0209328_100800052	3300027727	Forest Soil	MWGTSSPEDKLAGDLGNVIEATSTGGRRSDFFTAEKLAAGNLGLLQQYRHIAA
Ga0209526_103954991	3300028047	Forest Soil	LPEDKLAGDLGNVIEATSIGGRRSDSFTAEKLAPGNLGLLQQY
Ga0209526_107512461	3300028047	Forest Soil	MWGASSPDDKLTGDLGNAIVAMSIDGGGSDCLAAGKLAPGNLGLFQCGE
Ga0268264_117359741	3300028381	Switchgrass Rhizosphere	MWGTSSPDDKLTVVLGNLIEATKIAGPQSDRLMARKLSPGNFGLLQQYLP
Ga0075377_116930381	3300030844	Soil	MWGTSSPEDKLTGDLGNVIEATSIGGRRSDFFTARKLAPGNLGLLQQYRHIATLCGNAALRTQTERSGKKK
Ga0075395_113307742	3300030973	Soil	FRVKMWGTSSPEDKLAGDLGNVIEATSIGGRRSDFFTARKLAPGNLGLLQQYLPEADIHG
Ga0073994_122038681	3300030991	Soil	MWGTSSPEDKLAGDLGNVIEATSTGGRRSDFFTAEKLAPGNLGLLQQYRHEREVLTRAANVG
Ga0170824_1106665731	3300031231	Forest Soil	MWGTSSPEDKLTGDLGNVIGATSIGGRRSDFFTARKLAPGNL
Ga0170824_1226441632	3300031231	Forest Soil	MWGTSSPEDKVTGDLGNVIEATSIGGRRSDFFTAGKLAPGNLGLLQQYLP
Ga0170820_114728232	3300031446	Forest Soil	TSSPEDKLTGDLGNVIEATSIGGRRSDFFTAGKLAPGNLGLLQQYLP
Ga0170820_165661182	3300031446	Forest Soil	GTSSPEDKLTGDLGNVIEATSIGGRRSDFFTARKLAPGNLGLLQQYLHEA
Ga0318528_104405341	3300031561	Soil	MWGTSSPDDKLTGDLGNVIEATQIGGRRSDRLTAGKLSPGSFVLLQQYLPKADERTAAKSVLI
Ga0310915_101051702	3300031573	Soil	MWGTSSLDEKLTGDLGNVTEATRIGARWWDRLVAGKLPPGNFGLLQQYRHTAGISIYGTMSAAGET
Ga0318542_105536771	3300031668	Soil	MWGTSSPDDKLTGDLGNVIEAAQIGVRRSDRLTTRKTSQANFGVLQQYRPKADTESPFY
Ga0318560_105837471	3300031682	Soil	MWGTSSPDDELTGDLGNVIEATKIAGRRLVRLVAGNLSPGNFGLLQHNQG
Ga0306917_103895401	3300031719	Soil	MWGTSSLVDKLPDDLGTAIEGTRITGRRSDFFTARKLAPDNLGLLQQ
Ga0306917_105403311	3300031719	Soil	MWGTSSPEDKLAGNLGNVIGAISTGGRRVGFFYSRKLAPSNLGLLQQYRHQPAVVRDQPYARYGR
Ga0307469_102804702	3300031720	Hardwood Forest Soil	MWGTSLSEEKLAGDPGNVIEAKSIGGRRSDFFTAGKLAP
Ga0306918_108572982	3300031744	Soil	RRDFRVKMWGTSSPDDKLTGDLGNVIEATQIGGRRSDRLMAGKLSPGNFGLLQQYLP
Ga0318546_110516812	3300031771	Soil	VKMWGASSLADKLAGDLGNVIEATSISGRRSDFFTAKKLAPGNLRLLQLYLP
Ga0318546_111500451	3300031771	Soil	MWGTSSPDDKLTGDLGNAFEAAEIGGRWSDRLLAGKLSSGDFGLLQQY
Ga0318508_11912272	3300031780	Soil	MWGTSSPDDKLTGDLGNAFEAAEIGGRWSDRLLAGKLSSGDFGLLQQYLP
Ga0318550_101135692	3300031797	Soil	RRDFHVKMWGTSSPDDKLTGDLGNAFEAAEIGGRWSDRLLAGKLSSGDFGLLQQYRPTAEVSG
Ga0318523_106915451	3300031798	Soil	MWGTSSPDDKLTGDLGNAFEAAEIGGRWSDRLLAGKLSSGDFGLLQQYLPQPDVSNRS
Ga0306925_103011223	3300031890	Soil	MWGTSSPEDKLTDDLGNVIEAASTGGRRSDFFTAEKLAPGNLGLLQQYRHEV
Ga0318536_105804331	3300031893	Soil	MWGTSSPDDKLTGDLGNVIEARQSGGRRLVRVMAGKLSPGNFRLLQQYPHIATLCGNA
Ga0306923_112149911	3300031910	Soil	DLGNAIEGTRISGRRWIFLTAEKLAPDNLGLLQQYRHKAA
Ga0306923_119429711	3300031910	Soil	MRGTSLSEDKLAGDRGNVIEATSIGGRWLDFFTAGKLAPGNLGLLQQ
Ga0306921_103883361	3300031912	Soil	MWGTSSLEDKLAGDLGNVIEAISNRRSDFFTAGKLAPGNL
Ga0306921_108499812	3300031912	Soil	DFRVKMWGTSSPDDKLTDDLRNAIEGTRISGRRWSFLTAEKLAPSDLGLLQQYLPLAD
Ga0306921_117921132	3300031912	Soil	MWGTSSPDDKLTGDLGNVIESTQIGGRRLVRLMAGSLSPGNFGLLQQYRHKADIPRCLLHVRFRG
Ga0306921_119377562	3300031912	Soil	MWGTSSPDDNLTDDLGNAIEGTRISGRRWIFLTAEKLARGDLGLLQQYRH
Ga0310916_102740333	3300031942	Soil	LTGDLGNVTEATRIGARWWDRLVAGKLPPGNFGLLQQYRHTAGISIYGTMSAAGET
Ga0310909_104918792	3300031947	Soil	MWGTSLSEDKLAGDLGNVIEGTSISGRRSDFFAAEKITPSYLGLLQQYRHKAA
Ga0310909_110561892	3300031947	Soil	RAFRVKMWGTSSPDDELTGDLGNVIEATKIAGRRLVRLVAGNLSPGNFGLLQHNQGVKRT
Ga0310909_114746122	3300031947	Soil	MWGTSSLEDKLAGDLGNVIEAISNRRSDFFTAGKLAPGNLGLLQQYRHEV
Ga0306926_116028281	3300031954	Soil	MWVSSSPVDKLVDDLGTAIEGTRISGRRSDFFTAAKFAPDNLGLLQQYLPLA
Ga0306926_123108941	3300031954	Soil	MWGTSWSDDKLADDLSNVIEATSIGGRRLDVFTTGKLA
Ga0318530_100121291	3300031959	Soil	MWGTSSPDDKLTGDLGNAFEAAEIGGRWSDRLLAGKLSSGDFGLLQQYL
Ga0306922_114956933	3300032001	Soil	MWGTSSPDDKLTGDLGNVIEPTQSGGRRLVRVMAGKLSPGNFRLL
Ga0318569_101632471	3300032010	Soil	DKLTGDLGSVIETTQIGGRRSDRLMAGKLSPGNFGLLQQYRHISEVASCPS
Ga0318507_102360071	3300032025	Soil	MWGTSSPDDKLTDDLGNAIEGTRIGGRRRIFSTAEKLAPGDLGLLQQYRHI
Ga0310911_105224392	3300032035	Soil	MWGTSLSEDKLAGDLGNVIEGTSISGRRSDFFAAEKLTPSYLGLLQQYRHQAA
Ga0318556_105883401	3300032043	Soil	MWGTSSPDDKLTGDLGNVIEARQSGGRRLVRVMAGKLSPGNFRLLQQYLPLPDSCSAAD
Ga0318558_104489472	3300032044	Soil	SSLEDKLAGDLGNVIEAISNRRSDFFTAGKLAPGNLGLLQQYRHEAAVSAPACF
Ga0318570_100509921	3300032054	Soil	VKMWGTSSPNDKLTGDLGNVIESTKIGGRRLDCLMAGKLSPSNFGLLQHYLPQADLRSAANSPSI
Ga0306924_105479041	3300032076	Soil	MWGTSLSEDKLAGDLGNVIEGTSISGRRSDFFAAEKLTPSYLGLLQQY
Ga0307471_1003118922	3300032180	Hardwood Forest Soil	MWGTSLSEEKLAGDPGNVIEATSIGGRRSDFFTAGKLAPGNFGLLQQYRHKSEVPERIDDVCSWG
Ga0306920_1006181454	3300032261	Soil	MWGTSSPDRKLTGDLGNAIESTEIDGRRSRRPLAGKLSPGDFRLLQQNRPTAEA
Ga0306920_1006542385	3300032261	Soil	CTRRFRVKIWGATSPADKPAGELGNVIEATSISGRRSDFFTEEKLAPGNLRLLQQYRH
Ga0306920_1030558341	3300032261	Soil	KLSGNLGNVIGAISTGGRRVGFFYSRKLAPSNLGLLQQYRHKPAVPADASVR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F033238

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences