Metagenome / Metatranscriptome Family F033244

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F033244
Family Type	Metagenome / Metatranscriptome
Number of Sequences	178
Average Sequence Length	91 residues
Representative Sequence	MDTDADTNLIASELMAVQGILMCVLRRVAAVDQNLASAIESGLDDATNLAEEMKVALGEEAPSGEAAEALRTIERLRAGILGANPGGTD
Number of Associated Samples	153
Number of Associated Scaffolds	178

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	60.11 %
% of genes near scaffold ends (potentially truncated)	29.21 %
% of genes from short scaffolds (< 2000 bps)	79.78 %
Associated GOLD sequencing projects	142
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (83.146 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (23.596 % of family members)
Environment Ontology (ENVO)	Unclassified (34.831 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (55.056 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 70.79% β-sheet: 0.00% Coil/Unstructured: 29.21%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 178 Family Scaffolds
PF03631	Virul_fac_BrkB	37.08
PF00561	Abhydrolase_1	1.12
PF01068	DNA_ligase_A_M	0.56
PF00856	SET	0.56
PF00890	FAD_binding_2	0.56
PF00903	Glyoxalase	0.56
PF03446	NAD_binding_2	0.56

COG ID	Name	Functional Category	% Frequency in 178 Family Scaffolds
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	37.08
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	0.56
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.56

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	83.15 %
Unclassified	root	N/A	16.85 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	83.15 %
Unclassified	root	N/A	16.85 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	83.15 %
Unclassified	root	N/A	16.85 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	82.58 %
Unclassified	root	N/A	16.85 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	82.02 %
Unclassified	root	N/A	16.85 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	31.46 %
Unclassified	root	N/A	16.85 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	3.93 %
Holosporales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Holosporales	0.56 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	0.56 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	22.47 %
Unclassified	root	N/A	16.85 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.93 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	1.12 %
Candidatus Paracaedibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Holosporales → Candidatus Paracaedibacteraceae	0.56 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	0.56 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	21.91 %
Unclassified	root	N/A	16.85 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.93 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1.12 %
Candidatus Odyssella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Holosporales → Candidatus Paracaedibacteraceae → Candidatus Odyssella	0.56 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.85 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.93 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	1.69 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1.12 %
unclassified Candidatus Odyssella	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Holosporales → Candidatus Paracaedibacteraceae → Candidatus Odyssella → unclassified Candidatus Odyssella	0.56 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.85 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.93 %
Bradyrhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	1.12 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1.12 %
Candidatus Odyssella sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Holosporales → Candidatus Paracaedibacteraceae → Candidatus Odyssella → unclassified Candidatus Odyssella → Candidatus Odyssella sp.	0.56 %
Bradyrhizobium sp. URHA0013	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHA0013	0.56 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	0.56 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2199352025\|deepsgr__Contig_81647	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1272	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c1851714	Not Available	577	Open in IMG/M
3300001661\|JGI12053J15887_10612019	Not Available	518	Open in IMG/M
3300002070\|JGI24750J21931_1051368	Not Available	644	Open in IMG/M
3300002239\|JGI24034J26672_10016977	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1125	Open in IMG/M
3300004114\|Ga0062593_101588731	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	709	Open in IMG/M
3300004157\|Ga0062590_103008640	Not Available	505	Open in IMG/M
3300004463\|Ga0063356_102318736	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	819	Open in IMG/M
3300004479\|Ga0062595_100520829	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	900	Open in IMG/M
3300004643\|Ga0062591_102125452	Not Available	582	Open in IMG/M
3300005147\|Ga0066821_1008262	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	711	Open in IMG/M
3300005148\|Ga0066819_1001284	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1183	Open in IMG/M
3300005163\|Ga0066823_10009505	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1352	Open in IMG/M
3300005164\|Ga0066815_10003590	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1562	Open in IMG/M
3300005165\|Ga0066869_10085929	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	610	Open in IMG/M
3300005169\|Ga0066810_10056545	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	781	Open in IMG/M
3300005327\|Ga0070658_10505606	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1044	Open in IMG/M
3300005334\|Ga0068869_100105668	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2136	Open in IMG/M
3300005335\|Ga0070666_10015351	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4884	Open in IMG/M
3300005339\|Ga0070660_100310546	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1294	Open in IMG/M
3300005355\|Ga0070671_100025028	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4892	Open in IMG/M
3300005356\|Ga0070674_101094081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	703	Open in IMG/M
3300005356\|Ga0070674_101124279	Not Available	695	Open in IMG/M
3300005356\|Ga0070674_101285707	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHA0013	652	Open in IMG/M
3300005356\|Ga0070674_101797157	Not Available	556	Open in IMG/M
3300005364\|Ga0070673_100243715	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1564	Open in IMG/M
3300005437\|Ga0070710_11005946	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	608	Open in IMG/M
3300005440\|Ga0070705_100068682	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2134	Open in IMG/M
3300005441\|Ga0070700_100095290	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1950	Open in IMG/M
3300005441\|Ga0070700_100853295	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	738	Open in IMG/M
3300005444\|Ga0070694_100284405	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1262	Open in IMG/M
3300005457\|Ga0070662_100100846	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2185	Open in IMG/M
3300005457\|Ga0070662_100144545	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1846	Open in IMG/M
3300005535\|Ga0070684_100142103	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2171	Open in IMG/M
3300005543\|Ga0070672_100021797	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4692	Open in IMG/M
3300005546\|Ga0070696_101861469	Not Available	521	Open in IMG/M
3300005547\|Ga0070693_100170060	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1395	Open in IMG/M
3300005548\|Ga0070665_100602490	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1112	Open in IMG/M
3300005577\|Ga0068857_102392758	Not Available	519	Open in IMG/M
3300005718\|Ga0068866_10128496	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1438	Open in IMG/M
3300005719\|Ga0068861_100954178	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	816	Open in IMG/M
3300005843\|Ga0068860_100433453	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1305	Open in IMG/M
3300006038\|Ga0075365_10138198	All Organisms → cellular organisms → Bacteria	1690	Open in IMG/M
3300006038\|Ga0075365_10349031	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	1043	Open in IMG/M
3300006038\|Ga0075365_10843488	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	646	Open in IMG/M
3300006051\|Ga0075364_10702541	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	690	Open in IMG/M
3300006163\|Ga0070715_10151038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1138	Open in IMG/M
3300006175\|Ga0070712_100073065	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2459	Open in IMG/M
3300006237\|Ga0097621_100019269	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5234	Open in IMG/M
3300006572\|Ga0074051_11417375	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	838	Open in IMG/M
3300006574\|Ga0074056_11840374	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1742	Open in IMG/M
3300006580\|Ga0074049_10003850	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1142	Open in IMG/M
3300006871\|Ga0075434_101304105	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	737	Open in IMG/M
3300006881\|Ga0068865_101067800	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	710	Open in IMG/M
3300009092\|Ga0105250_10189372	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	865	Open in IMG/M
3300009094\|Ga0111539_11583778	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	760	Open in IMG/M
3300009098\|Ga0105245_10006870	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	9981	Open in IMG/M
3300009101\|Ga0105247_10069085	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2204	Open in IMG/M
3300009148\|Ga0105243_10050533	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3285	Open in IMG/M
3300009156\|Ga0111538_10253462	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2228	Open in IMG/M
3300009176\|Ga0105242_10008360	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7951	Open in IMG/M
3300009551\|Ga0105238_10247946	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1759	Open in IMG/M
3300009840\|Ga0126313_10188897	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1576	Open in IMG/M
3300010041\|Ga0126312_10913613	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	640	Open in IMG/M
3300010371\|Ga0134125_10159036	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2517	Open in IMG/M
3300010373\|Ga0134128_10219848	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2135	Open in IMG/M
3300010397\|Ga0134124_10032316	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4340	Open in IMG/M
3300010399\|Ga0134127_10222677	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1768	Open in IMG/M
3300010401\|Ga0134121_10053081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3327	Open in IMG/M
3300010403\|Ga0134123_10287087	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1452	Open in IMG/M
3300011107\|Ga0151490_1539638	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	620	Open in IMG/M
3300011119\|Ga0105246_10171107	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1664	Open in IMG/M
3300011332\|Ga0126317_10990025	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1053	Open in IMG/M
3300012212\|Ga0150985_102215089	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	609	Open in IMG/M
3300012212\|Ga0150985_114995935	Not Available	840	Open in IMG/M
3300012212\|Ga0150985_115762351	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	773	Open in IMG/M
3300012469\|Ga0150984_103354999	Not Available	736	Open in IMG/M
3300012469\|Ga0150984_104641200	Not Available	543	Open in IMG/M
3300012469\|Ga0150984_107150223	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	876	Open in IMG/M
3300012469\|Ga0150984_108642074	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	598	Open in IMG/M
3300012469\|Ga0150984_122290520	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	775	Open in IMG/M
3300012507\|Ga0157342_1087009	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	500	Open in IMG/M
3300012884\|Ga0157300_1051798	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	649	Open in IMG/M
3300012943\|Ga0164241_10925553	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	638	Open in IMG/M
3300012960\|Ga0164301_10435740	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	928	Open in IMG/M
3300012961\|Ga0164302_10180944	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1276	Open in IMG/M
3300012986\|Ga0164304_10003600	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5959	Open in IMG/M
3300012989\|Ga0164305_10030739	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2942	Open in IMG/M
3300013105\|Ga0157369_12134454	Not Available	568	Open in IMG/M
3300013297\|Ga0157378_10229343	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1769	Open in IMG/M
3300013308\|Ga0157375_12074023	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	676	Open in IMG/M
3300014325\|Ga0163163_12668362	Not Available	557	Open in IMG/M
3300014968\|Ga0157379_11033004	Not Available	785	Open in IMG/M
3300014969\|Ga0157376_10509222	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1184	Open in IMG/M
3300015077\|Ga0173483_10072742	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1370	Open in IMG/M
3300015200\|Ga0173480_11189003	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	514	Open in IMG/M
3300015371\|Ga0132258_10800921	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2376	Open in IMG/M
3300015371\|Ga0132258_11632759	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1627	Open in IMG/M
3300015372\|Ga0132256_101405959	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	809	Open in IMG/M
3300015372\|Ga0132256_101910409	Not Available	701	Open in IMG/M
3300015373\|Ga0132257_101391845	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	892	Open in IMG/M
3300015373\|Ga0132257_102791988	Not Available	636	Open in IMG/M
3300015374\|Ga0132255_103976701	Not Available	627	Open in IMG/M
3300017792\|Ga0163161_12119755	Not Available	500	Open in IMG/M
3300017965\|Ga0190266_10362731	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	787	Open in IMG/M
3300017965\|Ga0190266_11148485	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	534	Open in IMG/M
3300018027\|Ga0184605_10037510	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2024	Open in IMG/M
3300018028\|Ga0184608_10345656	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	653	Open in IMG/M
3300018072\|Ga0184635_10405101	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	515	Open in IMG/M
3300018073\|Ga0184624_10014832	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2801	Open in IMG/M
3300018073\|Ga0184624_10375094	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	635	Open in IMG/M
3300018074\|Ga0184640_10288490	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	745	Open in IMG/M
3300018083\|Ga0184628_10030362	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2697	Open in IMG/M
3300018465\|Ga0190269_10561866	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	760	Open in IMG/M
3300018466\|Ga0190268_10495146	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	827	Open in IMG/M
3300018469\|Ga0190270_10577390	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1090	Open in IMG/M
3300018469\|Ga0190270_10798329	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	950	Open in IMG/M
3300018476\|Ga0190274_11509514	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	763	Open in IMG/M
3300018476\|Ga0190274_12081176	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	664	Open in IMG/M
3300018481\|Ga0190271_10089442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Holosporales → Candidatus Paracaedibacteraceae → Candidatus Odyssella → unclassified Candidatus Odyssella → Candidatus Odyssella sp.	2794	Open in IMG/M
3300019263\|Ga0184647_1150071	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1412	Open in IMG/M
3300019356\|Ga0173481_10018399	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2092	Open in IMG/M
3300020005\|Ga0193697_1094948	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	716	Open in IMG/M
3300020016\|Ga0193696_1123238	Not Available	655	Open in IMG/M
3300021082\|Ga0210380_10191327	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	923	Open in IMG/M
3300022883\|Ga0247786_1073807	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	714	Open in IMG/M
3300025893\|Ga0207682_10348022	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	698	Open in IMG/M
3300025903\|Ga0207680_10337634	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1056	Open in IMG/M
3300025915\|Ga0207693_10194828	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1594	Open in IMG/M
3300025916\|Ga0207663_11372874	Not Available	569	Open in IMG/M
3300025918\|Ga0207662_10000358	All Organisms → cellular organisms → Bacteria → Proteobacteria	20535	Open in IMG/M
3300025919\|Ga0207657_10242460	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1439	Open in IMG/M
3300025923\|Ga0207681_10961445	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	716	Open in IMG/M
3300025933\|Ga0207706_10128958	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2224	Open in IMG/M
3300025937\|Ga0207669_11867311	Not Available	513	Open in IMG/M
3300025942\|Ga0207689_10043477	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3714	Open in IMG/M
3300025981\|Ga0207640_10091147	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2111	Open in IMG/M
3300026075\|Ga0207708_10230313	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1487	Open in IMG/M
3300026121\|Ga0207683_10146321	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2131	Open in IMG/M
3300026142\|Ga0207698_11137114	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	794	Open in IMG/M
3300027866\|Ga0209813_10053935	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1265	Open in IMG/M
3300027866\|Ga0209813_10146261	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	843	Open in IMG/M
3300027907\|Ga0207428_10903126	Not Available	624	Open in IMG/M
3300028380\|Ga0268265_10259314	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1544	Open in IMG/M
3300028381\|Ga0268264_11234268	Not Available	757	Open in IMG/M
3300028592\|Ga0247822_10184806	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1552	Open in IMG/M
3300028708\|Ga0307295_10016854	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1765	Open in IMG/M
3300028711\|Ga0307293_10287942	Not Available	521	Open in IMG/M
3300028712\|Ga0307285_10104324	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	751	Open in IMG/M
3300028714\|Ga0307309_10131881	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	620	Open in IMG/M
3300028717\|Ga0307298_10115064	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	769	Open in IMG/M
3300028718\|Ga0307307_10003324	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4057	Open in IMG/M
3300028793\|Ga0307299_10009791	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3377	Open in IMG/M
3300028793\|Ga0307299_10238946	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	683	Open in IMG/M
3300028796\|Ga0307287_10282004	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	628	Open in IMG/M
3300028802\|Ga0307503_10004948	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3495	Open in IMG/M
3300028824\|Ga0307310_10603624	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	559	Open in IMG/M
3300028872\|Ga0307314_10051501	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1034	Open in IMG/M
3300028880\|Ga0307300_10116152	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	819	Open in IMG/M
3300028880\|Ga0307300_10241271	Not Available	597	Open in IMG/M
3300030903\|Ga0308206_1062819	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	764	Open in IMG/M
3300030989\|Ga0308196_1057336	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	552	Open in IMG/M
3300031058\|Ga0308189_10474051	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	534	Open in IMG/M
3300031091\|Ga0308201_10005102	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2089	Open in IMG/M
3300031091\|Ga0308201_10027528	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1259	Open in IMG/M
3300031092\|Ga0308204_10029384	Not Available	1206	Open in IMG/M
3300031170\|Ga0307498_10418865	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	531	Open in IMG/M
3300031226\|Ga0307497_10108690	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1093	Open in IMG/M
3300031547\|Ga0310887_10026754	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2365	Open in IMG/M
3300031740\|Ga0307468_100788483	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	808	Open in IMG/M
3300031847\|Ga0310907_10616443	Not Available	593	Open in IMG/M
3300031854\|Ga0310904_10245099	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1107	Open in IMG/M
3300031858\|Ga0310892_10981506	Not Available	595	Open in IMG/M
3300032013\|Ga0310906_10246976	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1112	Open in IMG/M
3300033550\|Ga0247829_11089493	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	663	Open in IMG/M
3300033550\|Ga0247829_11419252	Not Available	574	Open in IMG/M
3300033551\|Ga0247830_10880672	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	713	Open in IMG/M
3300034149\|Ga0364929_0079677	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1017	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	57.87%
Host-Associated	Host-Associated	42.13%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	52.25%
Plants	Host-Associated → Plants	42.13%
Aquatic	Environmental → Aquatic	5.62%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	51.69%
Rhizosphere	Host-Associated → Plants → Rhizosphere	23.60%
Rhizoplane	Host-Associated → Plants → Rhizoplane	14.04%
Roots	Host-Associated → Plants → Roots	4.49%
Sediment	Environmental → Aquatic → Sediment	3.93%
Freshwater	Environmental → Aquatic → Freshwater	1.69%
Floodplain	Environmental → Terrestrial → Floodplain	0.56%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	43.26%
Soil	Host-Associated → Plants → Rhizosphere → Soil	14.61%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.99%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.99%
Loam	Environmental → Terrestrial → Soil → Loam	8.43%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.49%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.93%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	3.37%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.12%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.12%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.56%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.56%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.56%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	34.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	14.61%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.99%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.99%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.87%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	5.06%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.49%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.93%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	3.37%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.81%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.12%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.12%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.56%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.56%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.56%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.56%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.56%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.56%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	23.60%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.18%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	5.06%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	3.93%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.37%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	3.37%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.37%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.37%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.25%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.25%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.25%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.25%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.25%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.81%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	2.81%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.69%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.12%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.12%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.12%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.12%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.12%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.56%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.56%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.56%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.56%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.56%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.56%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.56%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.56%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.56%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.56%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.56%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.56%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352025	Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002070	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4	Host-Associated	Open in IMG/M
3300002239	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2	Host-Associated	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005147	Soil and rhizosphere microbial communities from Laval, Canada - mgLMC	Environmental	Open in IMG/M
3300005148	Soil and rhizosphere microbial communities from Laval, Canada - mgLMA	Environmental	Open in IMG/M
3300005163	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB	Environmental	Open in IMG/M
3300005164	Soil and rhizosphere microbial communities from Laval, Canada - mgLAC	Environmental	Open in IMG/M
3300005165	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC	Environmental	Open in IMG/M
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006051	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4	Host-Associated	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006572	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006574	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006580	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011107	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAC (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011332	Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012507	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.7.yng.070610	Host-Associated	Open in IMG/M
3300012884	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2	Environmental	Open in IMG/M
3300012943	Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019263	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300020005	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m2	Environmental	Open in IMG/M
3300020016	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m1	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300022883	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S066-202C-4	Environmental	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027866	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028712	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_139	Environmental	Open in IMG/M
3300028714	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_196	Environmental	Open in IMG/M
3300028717	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028872	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_204	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300030903	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_369 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030989	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_197 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031091	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300034149	Sediment microbial communities from East River floodplain, Colorado, United States - 20_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
deepsgr_01173900	2199352025	Soil	MDTDADTNLIASELMAVQGILMCVLRRVAAVDQNLASAIESGLDDATNLAEEMKVALGEEAPSGEVAEALRTIERLRAGILGANPDETD
ICChiseqgaiiDRAFT_18517141	3300000033	Soil	MEQRMDTNADTNLIASELMAVQGILMCVLRRVAAVDQNLASAIESGLDDAIKLAEEMKVALGEESPSGEAAEALQTIERLRAGILGAXXGXTD*
JGI12053J15887_106120192	3300001661	Forest Soil	MDTDADTNLIASELMAVQGILMCVLRRVAAVDQNLASAIESGLDDATNLAEEMKVALGEEAPSGEVAEALRTIERLRAGILGANPDGTD*
JGI24750J21931_10513682	3300002070	Corn, Switchgrass And Miscanthus Rhizosphere	MDTDADTNLIASELMAXQGILMCVLRRVAAVDQNLASAIESGLDDATNLAEEMKVALGEEAPSGEVAEALRTIERLRAGILGANPGGTD*
JGI24034J26672_100169771	3300002239	Corn, Switchgrass And Miscanthus Rhizosphere	GPAGNIMEERMDTDADTNLIASELMAVQGILMCVLRRVAAVDQNLASAIESGLDDATNLAEEMKVALGEEAPSGEVAEALRTIERLRAGILGANPGGTD*
Ga0062593_1015887311	3300004114	Soil	MDTDADTNLIAAELMAVQGILMCVLRRVAAVDQNLASAIESGLDDATNLAEEMKVALGEEAPSGEAAEALRTIERLRAGIVGANPGGTE*
Ga0062590_1030086401	3300004157	Soil	MEERMDTDADTNLIASELMAVQGILMCVLRRVAAVDQNLASAIESGLDDAIKLAEEMKVALGEETPSGEAAEALRTIERLRAGILGANT
Ga0063356_1023187361	3300004463	Arabidopsis Thaliana Rhizosphere	LMAVQGILMCVLRRVAAVDQNLASAIESGLDDATNLAEEMKVALGEEAPSGEAAEALRTIERLRAGIVGANPGGTE*
Ga0062595_1005208292	3300004479	Soil	MDTNADTNLIASELMAVQGILMCVLRRVAAVDQNLASAIESGLDDAIKLAEEMKVALGEESPSGEAAEALQTIERLRAGILGAK
Ga0062591_1021254521	3300004643	Soil	MEQRMDTDADTNLIASELMAVQGILMCVLRRVAAVDQNMASAIESGLDDATKLAEEMKVALGEEATSGEAAEALRTIERLRAGILGANPGETD*
Ga0066821_10082622	3300005147	Soil	MNTDADTNLIASELMAVQGILMCVLRRVAAVDQNLASAIESGLDDATNLAEEMKVALREEAPSGEVAEALRTIERLRAGILGANPDETD*
Ga0066819_10012842	3300005148	Soil	MDTDADTNLIASELMAVQGILMCVLRRVAAVDQNLASAIESGLDDATNLAEEMKVALGEEAPSGEVAEALRTIERLRAGILGANPDETD*
Ga0066823_100095052	3300005163	Soil	MDTDADTNLIASELMAVQGILMCVLRRVAAVDQNLASAIESGLDDATNLAEEMKVALGEEAPSGEVAEALRTIERLRAGILGANPGGTD*
Ga0066815_100035903	3300005164	Soil	MDTDADTNLIASELMAVQGILMCVLRRVAAVDQNLASAIESGLDDATKLAEEMKVALGEEATSGEAAEALRTIERLRA
Ga0066869_100859291	3300005165	Soil	METDADTNLIASELMAVQGILMCVLRRVAAVDQNLASAIESGLDDATNLAEEMKVALGEEAPSGEVAEALRTIERLRAGILGANPGGTD*
Ga0066810_100565451	3300005169	Soil	MKVSFSDFPTASPSGPAGDIMEERMDADADTNLIASELMAVQGILMCVLRRVAAVDQNLASAIESGLDDATNLAEEMKVALGEEATSGEAAEALRTIERLRAGILGANPGETD*
Ga0070658_105056061	3300005327	Corn Rhizosphere	MDTDADTNLIASELMAIQGILMCVLRRVAAVDQNLASAIESGLDDAIKLAEEMKVALGEESPSGEAAEALQTIERLRAGILGAKTGRTD*
Ga0068869_1001056683	3300005334	Miscanthus Rhizosphere	HGWSGRIMKVSFSDFPTASPSGPAGDIMEERMDADADTNLIASELMAVQGILMCVLRRVAAIDQNLASAIESGLDDATNLAEEMKVALGEEAPSGEVAEALRTIERLRAGILGANPGGTD
Ga0070666_100153513	3300005335	Switchgrass Rhizosphere	MDTDADTNLIASELMAIQGILMCVLRRVAAVDQNLASAIESGLDDATNLAEEMKVALGEEAPSGEVAEALRTIERLRAGILGANPGGTD*
Ga0070660_1003105461	3300005339	Corn Rhizosphere	MDTDVDTNLIASELMAIQGILMCVLRRVAAVDQNLASAIESGLDDATNLAEEMKVALREEAPSGEVAEALRTIER
Ga0070671_1000250287	3300005355	Switchgrass Rhizosphere	MDTDADTNLIASELMAVQGILMCVLRRVAAVDQNLASAIESGLDDATNLAEEMKVALREEAPSGEVAEALRTIERLRAGILAANPDETD*
Ga0070674_1010940811	3300005356	Miscanthus Rhizosphere	MKVSFSDFPTASPSGPAGDIMEERMDADADTNLIASELMAVQGILMCVLRRVAAIDQNLASAIESGLDDATNLAEEMKVALGEEATSGEAAEALRTIERLRAGILGANPGGTD*
Ga0070674_1011242792	3300005356	Miscanthus Rhizosphere	MDTDADTNLIAAELMAVQGILMCVLRRVAAVDQNLASAIESGLDDATNLAEEMKVALGEEAPSGEAAEALRTIERLRAGILGANPGGT
Ga0070674_1012857071	3300005356	Miscanthus Rhizosphere	MEERMDTDTDTNLIASELMAVQGILMCVLRRVAAVDQNLASAIESGLDDATNLAEEMKVALGEEAPSGEAAEALRTIERLRAGILGAPPDGTD*
Ga0070674_1017971571	3300005356	Miscanthus Rhizosphere	MEQRMDTNADTNLIASELMAVQGILMCVLRRVAAVDQNLASAIESGLDDAIKLAEEMKVALGEETPSGEAAEALRTIERLRAGILGANTAATD*
Ga0070673_1002437153	3300005364	Switchgrass Rhizosphere	MDTDADTNLIASELMAVQGILMCVLRRVAAVDQNLASAIESGLDDATNLAEEMKVALREEAPSGEVAEALRTIE
Ga0070710_110059462	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	ASELMAVQGILMCVLRRVAAVDQNLASAIESGLDDATNLAEEMKVALGEEAPSGEVAEALRTIERLRAGILGANPDETD*
Ga0070705_1000686823	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MDTDADTNLIASELMAVQGILMCVLRRVAAVDQNLASAIESGLDDATNLAEEMKVALGEEAPSGEAAEALRTIERLRAGILGANPGGTD*
Ga0070700_1000952901	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MDTNADTNLIASELMAVQGILMCVLRRVAAVDQNLASAIESGLDDATNLAEEMKVALGEEAPSGEVAEALRTIERLRAGILGANPGGTD*
Ga0070700_1008532951	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MEERMDTDADTNLIASELMAVQGILMCVLRRVAAVDQNMASAIESGLDDATKLAEEMKVALGEEATSGEAAEALRTIERLRAGILGANPGETD*
Ga0070694_1002844052	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	IMEERMDTDADTNLIASELMAVQGILMCVLRRVAAVDQNLASAIESGLDDATNLAEEMKVALGEEAPSGEVAEALRTIERLRAGILGANPGGTD*
Ga0070662_1001008461	3300005457	Corn Rhizosphere	MDTDADTNLIASELMAVQGILMCVLRRVAAVDQNLASAIESGLDDATNLAEEMKVALGEEAPSGEAAEALRTIERLRAGIVGANPGGTE*
Ga0070662_1001445452	3300005457	Corn Rhizosphere	MKVSFSDFPTASPSGPAGDIMEERMDADADTNLIASELMAVQGILMCVLRRVAAIDQNLASAIESGLDDATNLAEEMKVALGEEAPSGEVAEALRTIERLRAGILGANPGGTD*
Ga0070684_1001421033	3300005535	Corn Rhizosphere	MDTDADTNLIASELMAVQGILMCVLRRVAAVDQNLASAIESGLDDATNLAEEMKVALGEEAPSGEVAEALRTIERLRAGILGANLGGTD*
Ga0070672_1000217973	3300005543	Miscanthus Rhizosphere	MDTDADTNLIASELMAIQGILMCVLRRVAAVDQNLASAIESGLDDATNLAEEMKVALGEEAPSGEVAEALRTIERLRAGILGANPDETD*
Ga0070696_1018614691	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MEERMDTDADTNLIASELMAIQGILMCVLRRVAAVDQNLASAIESGLDDATNLAEEMKVALGEEAPSGEVAEALRTIERLRAGILGANPDETD*
Ga0070693_1001700601	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MDADADTNLIASELMAVQGILMCVLRRVAAVDQNLASAIESGLDDATNLAEEMKVALGEEATSGEAAEALRTIERLRA
Ga0070665_1006024902	3300005548	Switchgrass Rhizosphere	MDTDADTNLIASELMAVQGILMCVLRRVAAVDQNLASAIESGLDDAIKLAEEMKVALGEESPSGEAAEALQTIERLRAGILGANTGGTA*
Ga0068857_1023927581	3300005577	Corn Rhizosphere	MDTDADTNLIASELMAVQGILMCVLRRVAAVDQNLASAIESGLDDATNLAEEMKVALREEAPSGEVAEALRTIERLRAGILGANPDETD*
Ga0068866_101284963	3300005718	Miscanthus Rhizosphere	MDTDADTNLIASELMAVQGILMCVLRRVAAVDQNLASAIESGLDDATNLAEEMKVALGEEAPSGEVAEALRTIERLRA
Ga0068861_1009541782	3300005719	Switchgrass Rhizosphere	MDTNADTNLIASELMAVQGILMCVLRRVAAVDQNLASAIESGLDDAIKLAEEMKVALGEESPSGEAAEALQTIERLRAGILGAKTGRTD*
Ga0068860_1004334533	3300005843	Switchgrass Rhizosphere	MDTDADTNLIASELMAVQGILMCVLRRVAAVDQNLASAIESGLDDAIKLAEEMKVALGEESPSGEAAEALQTIERLRAGILGAN
Ga0075365_101381982	3300006038	Populus Endosphere	MDTDADTNLIASELMAVQGILMCVLRRVAAVDQSLASAIESGLDDAIKLAEEMKVALGEETPSGEAAEALRTIERLRAGILGANTAATD*
Ga0075365_103490312	3300006038	Populus Endosphere	MDTEADTNFIASELMAVQGILMCVLRRIAAVDQNLASAIESGLDDATKLAEEMKVALGEDAPSGEAAEALRTIERLRAGVLGADPDGTE*
Ga0075365_108434882	3300006038	Populus Endosphere	MDTDADTNLIASELMAVQGILMCVLRRVAAVDQNLASAIESGLDDAIKLAEEMKVALGEESPSGEAAEALQTIERLRAGILGAKTGRTD*
Ga0075364_107025412	3300006051	Populus Endosphere	MDTDADTNLIASELMAVQGILMCVLRRIAAVDQNLASAIESGLDDATKLAEEMKVALGEDAPSGEAAEALRTIERLRAGVLGADPDGTE*
Ga0070715_101510382	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MDTDADTNLIASELMAVQGILMCVLRRVAAVDQNLASAIESGLDDATNLAEEMKVALREEAPSGEVAEALRTIERLRAGILGANPGGTD*
Ga0070712_1000730654	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MDADADTNLIASELMAIQGILMCVLRRVAAVDQNLASAIESGLDDATNLAEEMKVALGEEAPSGEVAEALRTIERLRAGILGANPDETD*
Ga0097621_1000192696	3300006237	Miscanthus Rhizosphere	MDTDADTNLIASELMAIQGILMCVLRRVAAVDQNLASAIESGLDDATNLAEEMKVALREEAPSGEVAEALRTIERLRAGILGANPGGTD*
Ga0074051_114173751	3300006572	Soil	MDTDADTNLIASELMAVQGILMCVLRRVAAIDQNLASAIESGLDDATNLAEEMKVALREEAPSGEVAEALRTIERL
Ga0074056_118403743	3300006574	Soil	MKVSFSDFPTASPSGPAGDIMEERMDADADTNLIASELMAVQGILMCVLRRVAAVDQNLASAIESGLDDATNLAEEMKVALGEEAPSGEVAEALRTIERLRAGILGANPGGTD*
Ga0074049_100038501	3300006580	Soil	MDADADTNLIASELMAVQGILMCVLRRVAAVDQNLASAIESGLDDATNLAEEMKVALREEAPSGEVAEALRTIERLRA
Ga0075434_1013041051	3300006871	Populus Rhizosphere	CRSRTVLTASPSGPAGDTMEQRMDTDADTNLIASELMAVQGILMCVLRRVAAVDQSLASAIESGLDDATNLAEEMKVALREEAPSGEVAEALRTIERLRAGILGANPDETD*
Ga0068865_1010678001	3300006881	Miscanthus Rhizosphere	QGILMCVLRRVAAVDQNLASAIESGLDDATNLAEEMKVALGEEAPSGEAAEALRTIERLRAGIVGANPGGTE*
Ga0105250_101893721	3300009092	Switchgrass Rhizosphere	PSGGGGSDPRFGSSRNKSSRSVGDMSEQRMDTDADTNLIAAELMAVQGILMCVLRRVAAVDQNLASAIESGLDDATNLAEEMKVALGEEAPSGEVAEALRTIERLRAGILGANPDETD*
Ga0111539_115837782	3300009094	Populus Rhizosphere	MEERMDTDADTNLIASELMAVQGILMCVLRRVAAVDQNLASAIESGLDDATNLAEEMKVALGEEAPSGEVAEALRTIERLRAGILGANTAATD*
Ga0105245_100068705	3300009098	Miscanthus Rhizosphere	MEERMDTDADTNLIASELMAVQGILMCVLRRVAAVDQNLASAIESGLDDATNLAEEMKVALGEEAPSGEVAEALRTIERLRAGILGANPGGTD*
Ga0105247_100690852	3300009101	Switchgrass Rhizosphere	MEERMDTDADTNLIASELMAVQGILMCVLRRVAAVDQNLASAIESGLDDATNLAEEMKVALGEEAPSGEVAEALRTIERLRAGILGANPGGTE*
Ga0105243_100505333	3300009148	Miscanthus Rhizosphere	MEERMDADADTNLIASELMAIQGILMCVLRRVAAVDQNLASAIESGLDDATNLAEEMKVALGEEAPSGEVAEALRTIERLRAGILGANPDETD*
Ga0111538_102534621	3300009156	Populus Rhizosphere	MEERMDADADTNLIASELMAVQGILMCVLRRVAAVDQNLASAIESGLDDATNLAEEMKVALGEEAPSGEVAEALRTIERLRAGILGANPGGTD*
Ga0105242_100083608	3300009176	Miscanthus Rhizosphere	MEERMDTDADTNLIASELMAIQGILMCVLRRVAAVDQNLASAIESGLDDATNLAEEMKVALGEEAPSGEVAEALRTIERLRAGILGANPGGTD*
Ga0105238_102479461	3300009551	Corn Rhizosphere	PAGNIMEERMDTDADTNLIASELMAVQGILMCVLRRVAAVDQNLASAIESGLDDATNLAEEMKVALGEEATSGEAAEALRTIERLRAGILGANPGGTD*
Ga0126313_101888972	3300009840	Serpentine Soil	MTEQRMDTDADTNLIASELMAVQGILMCVLRRVAAVDQNMASAIESGLDDATKLAEEMKVALGEEATSGEAAEALRTVERLRAGILGTNPDGTD*
Ga0126312_109136132	3300010041	Serpentine Soil	MTEQRMDTDADTNLIASELMAVQGILMCVLRRVAAVDQNMASAIESGLDDATKLAEEMKVALGEEATSGEAAEALRTIERLRAGILGTNPDGTD*
Ga0134125_101590363	3300010371	Terrestrial Soil	MEERMDTDVDTNLIASELMAIQGILMCVLRRVAAVDQNLASAIESGLDDATNLAEEMKVALGEEAPSGEVAEALRTIERLRAGILGANPGGTE*
Ga0134128_102198483	3300010373	Terrestrial Soil	MEERMDTDADTNLIASELMAIQGILMCVLRRVAAVDQNLASAIESGLDDATNLAEEMKVALREEAPSGEVAEALRTIERLRAGILGANPGGTD*
Ga0134124_100323162	3300010397	Terrestrial Soil	MEQRMDTNADTNLIASELMAVQGILMCVLRRVAAVDQNLASAIESGLDDATNLAEEMKVALGEEAPSGEVAEALRTIERLRAGILGANPGGTD*
Ga0134127_102226771	3300010399	Terrestrial Soil	MEERMDTDADTNLIASELMAVQGILMCVLRRVAAVDQNLASAIESGLDDAIKLAEEMKVALGEESPSGEAAEALQTIERLRAGILGANTGGTA*
Ga0134121_100530813	3300010401	Terrestrial Soil	MEERMDTDADTNLIASELMAVQGILMCVLRRVAAVDQNMASAIESGLDDATKLAEEMKVALGEEATSGEAAEALRTIERLRAGILGANPGGTD*
Ga0134123_102870871	3300010403	Terrestrial Soil	TNLIASELMAVQGILMCVLRRVAAVDQNLASAIESGLDDATNLAEEMKVALGEEAPSGEVAEALRTIERLRAGILGANPGGTD*
Ga0151490_15396382	3300011107	Soil	AVQGILMCVLRRVAAVDENLASAIESGLDDATNLAEEMKVALGEEAPSGEVAEALRTIERLRAGILGANPGGTD*
Ga0105246_101711071	3300011119	Miscanthus Rhizosphere	MEERMDTDADTNLIASELMAIQGILMCVLRRVAAVDQNLASAIESGLDDATNLAEEMKVALREEAPSGEVAEALRTIERLRAGILGANPDETD*
Ga0126317_109900251	3300011332	Soil	MMEQRMDADADTNLIASELMAVQGILMCVLRRVAAIDQNLASAIESGLDDATNLAEEMKVALGEESTPGEAAEALRTIERLRAGILGANPGGTD*
Ga0150985_1022150891	3300012212	Avena Fatua Rhizosphere	MDTDADTNLIASELMAVQGILMCVLRRVAAVDQNMASAIESGLDDATKLAEEMKVALGEEATSGEAAEALRTIERLRAGILGANPGGTD*
Ga0150985_1149959351	3300012212	Avena Fatua Rhizosphere	MDTDADTNFIASELMAVQGILMCVLRRVAAVDQNLASAIESGLDDATKLAEEMKVALGDDAPSGEAAEALRTIERLRAGILGANPDGTD*
Ga0150985_1157623512	3300012212	Avena Fatua Rhizosphere	MDTDADTNLIASELMAVQGILMCVLRRVAAVDQNMASAIESGLDDATKLAEEMKVALGEEATSGEAAEALRTIERLRAGILGANLGGTD*
Ga0150984_1033549991	3300012469	Avena Fatua Rhizosphere	MDTDADTNLIAAELMAVQGILMCVLRRVAAVDQNLASAIESGLDDATNLAEEMKVTLGEEAPSGEAAEALRTIERLRAGILGANPGGTE*
Ga0150984_1046412001	3300012469	Avena Fatua Rhizosphere	MDTDADTNLIAAELMAVQGILMCVLRRVAAVDQNLASAIESGLDDATNLAEEMKVALGEEAPSGEAAEALRTIERLRAGILGANPGGTE*
Ga0150984_1071502232	3300012469	Avena Fatua Rhizosphere	MEQRMDTDADTNLIASELMAVQGILMCVLRRVAAVDQNLASAIESGLDDAIKLAEEMKVALGEESPSGEAAEALQTIERLRAGILGANAGGTD*
Ga0150984_1086420742	3300012469	Avena Fatua Rhizosphere	MMEQRMDADADTNLIASELMAVQGILMCVLRRVAAIDQNLASAIESGLDDATNLAEEMKVALGDESTSGEAAEALRTIERLRAGILGANPEETD*
Ga0150984_1222905203	3300012469	Avena Fatua Rhizosphere	MDTDADTNLIASELMAVQGILMCVLRRVAAVDQNMASAIESGLDDATKLAEEMKIALGEEATSGEAAEALRTIERLRAGILGANPGGTD*
Ga0157342_10870092	3300012507	Arabidopsis Rhizosphere	LMAVQGILMCVLRRVAAVDQNLASAIESGLDDATNLAEEMKVALGEEAPSGEASEALRTIERLRAGILGAPPDGTD*
Ga0157300_10517981	3300012884	Soil	MEERMDTDADTNLIASELMAVQGILMCVLRRVAAVDQNLASAIESGLDDATNLAEEMKVALGEEAPSGEVAEALRTIERLRAGIL
Ga0164241_109255532	3300012943	Soil	MMEQRMDADADTNLIASELMAVQGILMCVLRRVAAVDQNLASAIESGLDDATNLAEEMKVALGEEAPSGEAAEALRTIERLRAGILGAANPGGTE*
Ga0164301_104357402	3300012960	Soil	MEERMDTDADTNLIASELMAVQGILMCVLRRVAAVDQNLASAIESGLDDATNLAEEMKVALGEEAPSGEAAEALRTIERLRAGILGAPPDGTD*
Ga0164302_101809443	3300012961	Soil	MEERMDTDTDTNLIASELMAVQGILMCVLRRVAAVDQNLASAIESGLDDATNLAEEMKVALGEEAPSGEAAEALRTIERLRAGILGAPPHGTD*
Ga0164304_100036006	3300012986	Soil	MEERMDTDTDTNLIASELMAVQGILMCVLRRVAAVDQNLASAIESGLDDATNLAEEMKVALGEEAPSGEVAEALRTIERLRAGILGANPGGTD*
Ga0164305_100307393	3300012989	Soil	MEERMDTDADTNLIASELMAVQGILMCVLRRVAAVDQNLASAIESGLDDATNLAEEMKVALGEKAPSGEVAEALRTIERLRAGILGANPGGTD*
Ga0157369_121344542	3300013105	Corn Rhizosphere	MEERMDTDADTNLIASELMAVQGILMCVLRRVAAVDQNLASAIESGLDDATNLAEEMKVALGEEAPSGEVAEALRTI
Ga0157378_102293431	3300013297	Miscanthus Rhizosphere	MEQRMDTDADTNLIASELMAVQGILMCVLRRVAAVDQNLASAIESGLDDAIKLAEEMKVALGEEATSGEAAEALRTIERLRAGILGANPGETD*
Ga0157375_120740232	3300013308	Miscanthus Rhizosphere	MTEQRMDTDADTNLIAAELMAVQGILMCVLRRVAAVDQNLASAIESGLDDATNLAEEMKVALGEEAPSGEAAEALRTIERLRAGIVGANPGGTE*
Ga0163163_126683621	3300014325	Switchgrass Rhizosphere	MEQRMDTDADTNLIASELMAVQGILMCVLRRVAAVDQNLASAIESGLDDAIKLAEEMKVALGEESPSGEAAEALQTIERLRAGILGAN
Ga0157379_110330041	3300014968	Switchgrass Rhizosphere	MDTDADTNLIAAELMAVQGILMCVLRRVAAVDQNLASAIESGLDDATNLAEEMKVALGEEAPSGEVAKALRTIERPRAGILGANPGGTD*
Ga0157376_105092223	3300014969	Miscanthus Rhizosphere	MEERMDTDADTNLIASELMAVQGILMCVLRRVAAVDQNLASAIESGLDDATNLAEEMKVALREEAPSGEVAEALRTIERLRAGILGANPDETD*
Ga0173483_100727423	3300015077	Soil	MEQRMDTDADTNLIASELMAVQGILMCVLRRVAAVDQNLASAIESGLDDATNLAEEMKVALGEEAPSGEVAEALRTIERLRAGILGANPGGTD*
Ga0173480_111890031	3300015200	Soil	LIASELMAVQGILMCDLRRVAAVDQNLASAIESGLDDAIKLAEEMKVALGEESPSGEAAEALQTIERLRAGILGANTGGTA*
Ga0132258_108009212	3300015371	Arabidopsis Rhizosphere	MEERMDTDADTNLIASELMAVQGILMCVLRRVAAVDQNLASAIESGLDDATNLAEEMKVALGEEAPSGEVAEALRTIERLRAGILGANPDETD*
Ga0132258_116327592	3300015371	Arabidopsis Rhizosphere	MEQRMDTDADTNLIASELMAVQGILMCVLRRVAAVDQNLASAIESGLDDAIKLAEEMKVALGEESPSGEAAEALQTIERLRAGILGANTGGTA*
Ga0132256_1014059593	3300015372	Arabidopsis Rhizosphere	MEERMDTDADTNLIASELMAIQGILMCVLRRVAAVDQNLASAIESGLDDATNLAEEMKVALGEEAPSGEVAEALRTIERLRAGILGAPPDGTD*
Ga0132256_1019104092	3300015372	Arabidopsis Rhizosphere	MEQRMDTDADTNLIASELMAVQGILMCVLRRVAAVDQNLASAIESGLDDAIKLAEEMKVALGEEAPSGEAAEALRTIERLRAGILGANTGGTA*
Ga0132257_1013918452	3300015373	Arabidopsis Rhizosphere	MEERMDTDTDTNLIASELMAVQGILMCVLRRVAAVDQNLASAIESGLDDATNLAEEMKVALGEEAPSGEAAEALRTIERLR
Ga0132257_1027919881	3300015373	Arabidopsis Rhizosphere	MEERMDTDADTNLIAAELMAVQGILMCVLRRVAAVDQNLASAIESGLDDATNLAEEMKVALGEEAPSGEAAEALRTIERLRAGIL
Ga0132255_1039767011	3300015374	Arabidopsis Rhizosphere	MEERMDTDTDTNLIASELMAVQGILMCVLRRVAAVDQNLASAIESGLDDATNLAEEMKVALGEEAPSGEAAEALRTIERLRAGILGARPDGTD*
Ga0163161_121197551	3300017792	Switchgrass Rhizosphere	MDTDADTNLIASELMAVQGILMCVLRRVAAVDQNLASAIESGLDDAIKLAEEMKVALGEESPSGEAAEALQTIERLRAGILGAKTGRTD
Ga0190266_103627312	3300017965	Soil	MDTDADTNLIASELMAVQGILMCVFRRVAAVDQNMASAIESGLDDATKLAEEMKVALGEEATSGEAAEALRTIERLRAGILGANLGGTD
Ga0190266_111484851	3300017965	Soil	LTASPSGPVGDTMEQRMDTDADTNLIASELMAVQGILMCVLRRVAAVDQNLASAIESGLDDATNLAEEMKVALGDESTSGEAAEALRTIERLRAGILGANPEETD
Ga0184605_100375103	3300018027	Groundwater Sediment	MDTETNLIAAELMAAQGILMCVLRRIAAVDENLASAIKGRFDDAANLAEKMTLALGEAAPSSEAVEAQRTIERLRRRHAWRT
Ga0184608_103456561	3300018028	Groundwater Sediment	MDIETDTNLIAAELMAVQGILMCVLRRIAAVDQNLASAVEGGFDDAVNLAEKMKVALGAGVPSKEAVESLRTIERLRAGILGNHDMTE
Ga0184635_104051012	3300018072	Groundwater Sediment	MDADADTNLIASELMAVQGILMCVLRRVAAIDQNLASAIESGLDDATNLAEEMKVALGEEATSGEAAEALRTIERLRAGILGANPGETD
Ga0184624_100148322	3300018073	Groundwater Sediment	MKVSFSDFPTASPSGPAGDIMEERMDADADTNLIASELMAVQGILMCVLRRVAAIDQNLASAIESGLDDATNLAEEMKVALGEEATSGEAAEALRTIERLRAGILGANPGGTD
Ga0184624_103750942	3300018073	Groundwater Sediment	MNTDADTYLIASELMAVQGILMCVLRRVAAIDQNLASAIESGLDDATNLAEEMKVALGDESTSGEAAEALRTIERLRAGILGANPGGTD
Ga0184640_102884902	3300018074	Groundwater Sediment	MKVSFSDFPTASPSGPAGDIMEERMDADADTNLIASELMAVQGILMCVLRRVAAIDQNLASAIESGLDDATNLAEEMKVALGDESTSGEAAEALRTIERLRAGILGANPGGTD
Ga0184628_100303622	3300018083	Groundwater Sediment	MDADADTNLIASELMAVQGILMCVLRRVAAIDQNLASAIESGLDDATNLAEEMKVALGDESTSGEAAEALRTIERLRAGILGANPGGTD
Ga0190269_105618662	3300018465	Soil	MDTDADTNLIASELMAVQGILMCVLRRVAAVDQNMASAIEGGLDDATKLAEEMKVALGEEATSGEAAEALRTIERLRAGILGANPGGTD
Ga0190268_104951462	3300018466	Soil	MDTDADTNLIASELMAVQGILMCVLRRVAAVDQNMASAIEGGLDDATKLAEEMKVALGEESTPGEAAEALRTIERLRAGILGAKTGRTD
Ga0190270_105773903	3300018469	Soil	MDADADTNLVASELMAVQGILMCVLRRIAAVDQNLASAIESGLDDATSLAEEMKVALGEEGPSGEAAEALRTIERLRAGILGANPGGTD
Ga0190270_107983291	3300018469	Soil	NLIASELMAVQGILMCVLRRVAAVDQNLASAIESGLDDATSLAEEMKVALGEKGPSGEAAEALRTIERLRAGILGANPGGTD
Ga0190274_115095142	3300018476	Soil	MDADTNLVASELMAVQGILMCVLRRIAAVDQNLASAIESGLDDATSLAEEMKVALGEEGPSGEAAEALRTIERLRAGILGANPGGTD
Ga0190274_120811762	3300018476	Soil	MDTDADTNLIASELMAVQGILMCVLRRVAAVDQNMASAIESGLDDATKLAEEMKVALGEEATSGEAAEALRTVERLRAGILGTNPDGTD
Ga0190271_100894421	3300018481	Soil	HGWSGRIMKVSFSDFPTASPSGPAGDIMEERMDADADTNLIASELMAVQGILMCVLRRVAAIDQNLASAIESGLDDATNLAEEMKVALGEEATSGEAAEALRTIERLRAGILGANPGGTD
Ga0184647_11500712	3300019263	Groundwater Sediment	MKVSFSDFPTASPSGPAGDIMEERMDADADTNLIASELMAVQGILMCVLRRVAAIDQNLASAIESGLDDATNLAEEMKVALGEEATSGEAAEALRTIERLRAGILGANPG
Ga0173481_100183991	3300019356	Soil	MDTDADTNLIASELMAVQGILMCVLRRVAAVDQNLASAIESGLDDATNLAEEMKVALGEEAPSGEVAEALRTIERLRAGILGANPGGTD
Ga0193697_10949481	3300020005	Soil	EERMDADADTNLIASELMAVQGILMCVLRRVAAIDQNLASAIESGLDDATNLAEEMKVALGDESTSGEAAEALRTIERLRAGILGANPEETD
Ga0193696_11232383	3300020016	Soil	MMEQRMDADADTNLIASELMAVQGILMCVLRRVAAIDQNLASAIESGLDDATNLAEEMKVALGDESTSGEAAEALRTIERLRAGILGANPEETD
Ga0210380_101913272	3300021082	Groundwater Sediment	MDADADTNLIASELMAVQGILMCVLRRVAAIDQNLASAIESGLDDATNLAEEMKVALGDESTSGEAAEALRTIERLRAGILGANPEETD
Ga0247786_10738071	3300022883	Soil	MDTDADTNLIAAELMAVQGILMCVLRRVAAVDQNLASAIESGLDDATNLAEEMKVALGEEAPSGEAAEALRTIERLRAGIVGANPGGTE
Ga0207682_103480221	3300025893	Miscanthus Rhizosphere	IAAELMAVQGILMCVLRRVAAVDQNLASAIESGLDDATNLAEEMKVALGEEAPSGEVAEALRTIERLRAGILGANPDETD
Ga0207680_103376342	3300025903	Switchgrass Rhizosphere	MDTDADTNLIASELMAIQGILMCVLRRVAAVDQNLASAIESGLDDATNLAEEMKVALGEEAPSGEVAEALRTIERLRAGILGANPGGTD
Ga0207693_101948283	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MDTDADTNLIASELMAIQGILMCVLRRVAAVDQNLASAIESGLDDATNLAEEMKVALGEEAPSGEVAEALRTIERLRAGILGANPDETD
Ga0207663_113728742	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MEERMDTDADTNLIASELMAVQGILMCVLRRVAAVDQNLASAIESGLDDATNLAEEMKVALREEAPSGEVAEALRTIERLRAGILGANPGGTD
Ga0207662_100003582	3300025918	Switchgrass Rhizosphere	MDADADTNLIASELMAIQGILMCVLRRVAAVDQNLASAIESGLDDATNLAEEMKVALGEEAPSGEVAEALRTIERLRAGILGANPGGTD
Ga0207657_102424603	3300025919	Corn Rhizosphere	MDADADTNLIASELMAVQGILMCVLRRVAAIDQNLASAIESGLDDATNLAEEMKVALREEAPSGEVAEALRTIER
Ga0207681_109614452	3300025923	Switchgrass Rhizosphere	MDTDADTNLIASELMAVQGILMCVLRRVAAVDQNLASAIESGLDDATNLAEEMKVALGEEATSGEAAEALRTIERLRAGILGANPGGTD
Ga0207706_101289583	3300025933	Corn Rhizosphere	MKVSFSDFPTASPSGPAGDIMEERMDADADTNLIASELMAVQGILMCVLRRVAAIDQNLASAIESGLDDATNLAEEMKVALGEEAPSGEVAEALRTIERLRAGILGANPGGTD
Ga0207669_118673112	3300025937	Miscanthus Rhizosphere	MDTDTDTNLIASELMAVQGILMCVLRRVAAVDQNLASAIESGLDDATNLAEEMKVALGEEAPSGEAAEALRTIERLRAGILGAPPDG
Ga0207689_100434774	3300025942	Miscanthus Rhizosphere	MDTDADTNLIASELMAVQGILMCVLRRVAAIDQNLASAIESGLDDATNLAEEMKVALGEEAPSGEVAEALRTIERLRAGILGANPGGTD
Ga0207640_100911472	3300025981	Corn Rhizosphere	MDTDADTNLIASELMAVQGILMCVLRRVAAVDQNLASAIESGLDDATNLAEEMKVALREEAPSGEVAEALRTIERLRAGILGANPGGTD
Ga0207708_102303131	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	SGPAGNIMEERMDADADTNLIASELMAIQGILMCVLRRVAAVDQNLASAIESGLDDATNLAEEMKVALGEEAPSGEVAEALRTIERLRAGILGANPGGTD
Ga0207683_101463213	3300026121	Miscanthus Rhizosphere	MDTDADTNLIASELMAVQGILMCVLRRVAAVDQNLASAIESGLDDATNLAEEMKVALREEAPSGEVAEALRTIERLRAGILRANPGGTD
Ga0207698_111371141	3300026142	Corn Rhizosphere	MDTDADTNLIASELMAIQGILMCVLRRVAAVDQNLASAIESGLDDATNLAEEMKVALGEEAPSGEVAEALRTIERLRAGILGANPG
Ga0209813_100539352	3300027866	Populus Endosphere	MDTDADTNLIASELMAVQGILMCVLRRVAAVDQSLASAIESGLDDAIKLAEEMKVALGEETPSGEAAEALRTIERLRAGILGANTAATD
Ga0209813_101462612	3300027866	Populus Endosphere	MDTDADTNLIASELMAVQGILMCVLRRVAAVDQNLASAIESGLDDAIKLAEEMKVALGEESPSGEAAEALQTIERLRAGILGANTGGTA
Ga0207428_109031261	3300027907	Populus Rhizosphere	MDTNADTNLIASELMAVQGILMCVLRRVAAVDQNLASAIESGLDDATNLAEEMKVALGEEATSGEAAEALRTIERLRAGILGANPGGTD
Ga0268265_102593141	3300028380	Switchgrass Rhizosphere	MEERMDTDADTNLIASELMAIQGILMCVLRRVAAVDQNLASAIESGLDDATNLAEEMKVALGEEAPSGEVAEALRTIERLRAGILGANPGGTD
Ga0268264_112342682	3300028381	Switchgrass Rhizosphere	MDTDADTNLIASELMAVQGILMCVLRRVAAVDQNLASAIESGLDDATNLAEEMKVALGEEATSGEAAEALRTIERLRAGILGANPDETD
Ga0247822_101848063	3300028592	Soil	MDTDADTNLIASELMAVQGILMCVLRRVAAVDQNMASAIESGLDDATKLAEEMKVALGQEAPSGEAAEALRTIERLRAGILGANPGGTD
Ga0307295_100168542	3300028708	Soil	MDADADTNLIASELMAVQGILMCVLRRVAAVDQNLASAIESGLDDATNLAEEMKVALGDESTSGEAAEALRTIERLRAGILGANPEETD
Ga0307293_102879421	3300028711	Soil	LDMDTETNLIAAELMAAQGILMCVLRRIAAVDENLASAIKGRFDDAANLAEKMTLALGEAAPSSEAVEAQRTIERLR
Ga0307285_101043242	3300028712	Soil	ADTNLIASELMAVQGILMCVLRRVAAIDQNLASAIESGLDDATNLAEEMKVALGEEATSGEAAEALRTIERLRAGILGANPGGTD
Ga0307309_101318812	3300028714	Soil	ADADTNLIASELMAVQGILMCVLRRVAAIDQNLASAIESGLDDATNLAEEMKVALGDESTSGEAAEALRTIERLRAGILGANPEETD
Ga0307298_101150641	3300028717	Soil	LDMDTETNLIAAELMAAQGILMCVLRRIAAVDENLASAIKGRFDDAANLAEKMTLALGEAAPSSEAVEAQRTIERLRRRHAWRT
Ga0307307_100033241	3300028718	Soil	MDIETDTNLIAAELMAVQGILMCVLRRIAAVDQNLASAVEGGFDDAVNLAEKMKVALGAGVPSKEAVESLRTI
Ga0307299_100097916	3300028793	Soil	MDTETNLIAAELMAAQGILMCVLRRIAAVDENLASAIKGRFDDAANLAEKMTLALGEAAPSSEAVEAQRTFERLRRRHAWRT
Ga0307299_102389461	3300028793	Soil	TNLVASELMAVQGILMCVLRRIAAVDQNLASAIESGLDDATNLAEEMKVALGEESTPGEAAEALRTIERLRAGILGANPEETD
Ga0307287_102820042	3300028796	Soil	MDTETNLIAAELMAAQGILMCVLRRIAAVDENLASAIKGRFEDAANLAEKMTLALGEAAPSSEAVEAQRTIERLRRRHAWRT
Ga0307503_100049483	3300028802	Soil	MDADTNLIASELMAVQGILMCVLRRVAAIDQNLASAIESGLDDATNLAEEMKVALGDESTSGEAAEALRTIERLRAGILGANPEETD
Ga0307310_106036241	3300028824	Soil	ELRNRDTSGPAGDIMEQRMDTDADTNLIASELMAVQGILMCVLRRVAAVDQNLASAIESGLDDATNLAEEMKVALGEESTPGEAAEALRTIERLRAGILGANPGGTD
Ga0307314_100515011	3300028872	Soil	MDIETDTNLIAAELMAVQGILMCVLRRIAAVDQNLASAVEGGFDDAANLAEKMKVALGAGGPSKEAVESLRTIERLGAGILGNHDMME
Ga0307300_101161521	3300028880	Soil	MDADADTNLIASELMAVQGILMCVLRRVAAIDQNLASAIESGLDDATNLAEEMKVALGEEATSGEAAEALRTIERLRAGILGANPGGTD
Ga0307300_102412712	3300028880	Soil	MDTETNLIAAELMAAQGILMCVLRRIAAVDENLASAIKGRFDDAANLAEKMTLALGEAAPSSEAVEAQQTIERLRRRHAWRT
Ga0308206_10628191	3300030903	Soil	MDTDADTNLIASELMAVQGILMCVLRRVAAIDQNLASAIESGLDDATNLAEEMKVALGEEATSGEAAEALRTIERLRAGILGANPGGTD
Ga0308196_10573361	3300030989	Soil	MDIETDTNLIAAELMAVQGILMCVLRRIAAVDQNLASAVEGGFDDAVNLAEKMKVALGAGVPSKEAVESLRTIERLRAGILGNHDMME
Ga0308189_104740512	3300031058	Soil	AAELMAVQGILMCVLRRIAAVDQNLASAVEGGFDDAVNLAEKMKVALGAGVPSKEAVESLRTIERLRAGILGNHDMTE
Ga0308201_100051022	3300031091	Soil	MDIETDTNLIAAELMAVQGILMCVMRRIAAVDQNLASAVEGGFDDAVNLAEKMKVALGAGVPSKEAVESLRTIERLRAGILGNHDMTE
Ga0308201_100275281	3300031091	Soil	MDTDADTNLIASELMAVQGILMCVLRRVAAVDQNMASAIESGLDDATKLAEEMKVALGEEATSGEAAEALRTIERLRAGILGANPGGTD
Ga0308204_100293841	3300031092	Soil	MDADADTNLIASELMAVQGILMCVLRRVAAIDQNLASAIESGLDDATNLAEEMKVALGEESRPGEAAEALRTIERLRAGILGANPGGTD
Ga0307498_104188651	3300031170	Soil	MKVSFSDFPTASPSGPAGDIMEERMDADADTNLIASELMAVQGILMCVLRRVAAIDQNLASAIESGLDDATNLAEEMKVALGEEAPSGEVAEALRTIERLRAGILGANLGGTD
Ga0307497_101086902	3300031226	Soil	MDTDADTNLIASELMAIQGILMCVLRRVAAVDQNLASAIESGLDDATNLAEEMKVALGEEATSGEAAEALRTIERLRAGILGANPGGTD
Ga0310887_100267542	3300031547	Soil	MKVSFSDFPTASPSGPAGDIMEERMDADADTNLIASELMAVQGILMCVLRRVAAIDQNLASAIESGLDDATNLAEEMKVALGEEATSGEAVEALRTIERLRAGILGANPGGTD
Ga0307468_1007884831	3300031740	Hardwood Forest Soil	MDTDADTNLIASELMAVQGILMCVLRRVAAVDQNLASAIESGLDDAIKLAEEMKVALGEETPSGEAAEALRTIERLRAGILGANTAATD
Ga0310907_106164432	3300031847	Soil	MDTDTDTNLIASELMAVQGILMCVLRRVAAIDQNLASAIESGLDDATNLAEEMKVALGEEAPSGEVAEALRTIERLRAGILGANPGGTD
Ga0310904_102450992	3300031854	Soil	MKVSFSDFPTASPSGPAGDIMEERMDADADTNLIASELMAVQGILMCVLRRVAAIDQNLASAIESGLDDATNLAEEMKVALGEEATSGEAVEALRTIERLRA
Ga0310892_109815061	3300031858	Soil	MDADADTNLIASELMAVQGILMCVLRRVAAVDQNLASAIESGLDDATNLAEEMKVALGEEATSGEAAEALRTIERLRAGILGANPGGTD
Ga0310906_102469762	3300032013	Soil	MDADADTNLIASELMAVQGILMCVLRRVAAIDQNLASAIESGLDDATNLAEEMKVALGEEAPSGEVAEALRTIERLRAGILGANPGGTD
Ga0247829_110894931	3300033550	Soil	DTNLIASELMAVQGILMCVLRRVAAIDQNLASAIESGLDDATNLAEEMKVALGDESTSGEAAEALRTIERLRAGILGANPEETD
Ga0247829_114192521	3300033550	Soil	MDADADTNLVASELMAVQGILMCVLRRIAAVDQNLASAIESGLDDATSLAEEMKVALGEEAPSGEVAEALRTIERLRAGILGANPDETD
Ga0247830_108806722	3300033551	Soil	PTRGGDGGHGWSGRIMKVSFSDFPTASPSGPAGDIMEERMDADADTNLIASELMAVQGILMCVLRRVAAIDQNLASAIESGLDDATNLAEEMKVALGEEATSGEAVEALRTIERLRAGILGANPGGTD
Ga0364929_0079677_756_1016	3300034149	Sediment	DADTNLIASELMAVQGILMCVLRRVAAIDQNLASAIESGLDDATNLAEEMKVALGEEATSGEAAEALRTIERLRAGILGANPGGTD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F033244

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences