Metagenome / Metatranscriptome Family F033580

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F033580
Family Type	Metagenome / Metatranscriptome
Number of Sequences	177
Average Sequence Length	45 residues
Representative Sequence	MKKEEARRAVLSEYDRWAKKHPNDARMMGGFLFFRYLQKEK
Number of Associated Samples	97
Number of Associated Scaffolds	177

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	81.92 %
% of genes near scaffold ends (potentially truncated)	96.61 %
% of genes from short scaffolds (< 2000 bps)	93.79 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.56

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (67.797 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (29.944 % of family members)
Environment Ontology (ENVO)	Unclassified (54.237 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (62.712 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 52.17% β-sheet: 0.00% Coil/Unstructured: 47.83%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.56
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.56
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 177 Family Scaffolds
PF00216	Bac_DNA_binding	3.39
PF07885	Ion_trans_2	3.39
PF03330	DPBB_1	2.26
PF00903	Glyoxalase	1.69
PF11160	Hva1_TUDOR	1.69
PF12681	Glyoxalase_2	1.69
PF02954	HTH_8	1.13
PF01323	DSBA	1.13
PF03401	TctC	0.56
PF00072	Response_reg	0.56
PF05368	NmrA	0.56
PF13426	PAS_9	0.56
PF00293	NUDIX	0.56
PF00856	SET	0.56
PF09176	Mpt_N	0.56
PF14659	Phage_int_SAM_3	0.56
PF07978	NIPSNAP	0.56
PF11154	DUF2934	0.56
PF00211	Guanylate_cyc	0.56
PF03992	ABM	0.56
PF00589	Phage_integrase	0.56
PF00005	ABC_tran	0.56
PF09361	Phasin_2	0.56
PF03372	Exo_endo_phos	0.56
PF00313	CSD	0.56
PF13450	NAD_binding_8	0.56
PF13505	OMP_b-brl	0.56
PF11185	DUF2971	0.56
PF01527	HTH_Tnp_1	0.56
PF09913	DUF2142	0.56

COG ID	Name	Functional Category	% Frequency in 177 Family Scaffolds
COG0776	Bacterial nucleoid DNA-binding protein IHF-alpha	Replication, recombination and repair [L]	3.39
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.56
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.56

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.80 %
All Organisms	root	All Organisms	32.20 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.80 %
cellular organisms	root	All Organisms → cellular organisms	32.20 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.80 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	32.20 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	16.38 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	3.95 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	2.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.80 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	13.56 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	3.95 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	2.82 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.56 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.80 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6.21 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.95 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	2.82 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.56 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.56 %
Vibrionales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.80 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.95 %
Gemmatales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales	2.82 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.82 %
Vibrionaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales → Vibrionaceae	0.56 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.56 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.56 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.80 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.95 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.26 %
Gemmataceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae	2.82 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.56 %
Vibrio	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales → Vibrionaceae → Vibrio	0.56 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.56 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.80 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.95 %
Zavarzinella	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Zavarzinella	2.82 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.56 %
Vibrio cidicii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales → Vibrionaceae → Vibrio → Vibrio cidicii	0.56 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.56 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.56 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.80 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.95 %
Zavarzinella formosa	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Zavarzinella → Zavarzinella formosa	2.82 %
Bradyrhizobium sp. Ec3.3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ec3.3	0.56 %
Vibrio cidicii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales → Vibrionaceae → Vibrio → Vibrio cidicii	0.56 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.56 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.56 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.56 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2070309004\|prs_FIHLEPW02SICSR	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	515	Open in IMG/M
3300004633\|Ga0066395_10504540	Not Available	697	Open in IMG/M
3300004633\|Ga0066395_10952946	Not Available	522	Open in IMG/M
3300005332\|Ga0066388_101235236	Not Available	1281	Open in IMG/M
3300005332\|Ga0066388_104148098	Not Available	739	Open in IMG/M
3300005332\|Ga0066388_104186430	Not Available	735	Open in IMG/M
3300005332\|Ga0066388_104491896	Not Available	710	Open in IMG/M
3300005332\|Ga0066388_104717763	All Organisms → cellular organisms → Bacteria	693	Open in IMG/M
3300005332\|Ga0066388_105834667	Not Available	623	Open in IMG/M
3300005332\|Ga0066388_108312630	Not Available	518	Open in IMG/M
3300005363\|Ga0008090_15610771	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	635	Open in IMG/M
3300005436\|Ga0070713_100280863	All Organisms → cellular organisms → Bacteria	1528	Open in IMG/M
3300005436\|Ga0070713_102493688	Not Available	500	Open in IMG/M
3300005764\|Ga0066903_100370443	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2332	Open in IMG/M
3300005764\|Ga0066903_101649587	All Organisms → cellular organisms → Bacteria	1218	Open in IMG/M
3300005764\|Ga0066903_103902276	All Organisms → cellular organisms → Bacteria	800	Open in IMG/M
3300005764\|Ga0066903_107410915	Not Available	567	Open in IMG/M
3300005764\|Ga0066903_107457405	Not Available	565	Open in IMG/M
3300005764\|Ga0066903_107533077	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	561	Open in IMG/M
3300005764\|Ga0066903_108469435	Not Available	524	Open in IMG/M
3300005764\|Ga0066903_108638332	Not Available	518	Open in IMG/M
3300005764\|Ga0066903_108971268	Not Available	506	Open in IMG/M
3300006172\|Ga0075018_10556714	Not Available	605	Open in IMG/M
3300006175\|Ga0070712_101703281	Not Available	552	Open in IMG/M
3300006954\|Ga0079219_10047334	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1829	Open in IMG/M
3300009792\|Ga0126374_11249468	Not Available	597	Open in IMG/M
3300010048\|Ga0126373_10097511	Not Available	2712	Open in IMG/M
3300010048\|Ga0126373_10441259	Not Available	1334	Open in IMG/M
3300010048\|Ga0126373_10740442	Not Available	1043	Open in IMG/M
3300010048\|Ga0126373_10867256	Not Available	966	Open in IMG/M
3300010048\|Ga0126373_12724535	Not Available	552	Open in IMG/M
3300010359\|Ga0126376_10132737	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1964	Open in IMG/M
3300010359\|Ga0126376_10765602	Not Available	938	Open in IMG/M
3300010359\|Ga0126376_11363417	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Zavarzinella → Zavarzinella formosa	732	Open in IMG/M
3300010359\|Ga0126376_12706764	Not Available	545	Open in IMG/M
3300010360\|Ga0126372_10232558	Not Available	1565	Open in IMG/M
3300010360\|Ga0126372_11546708	Not Available	701	Open in IMG/M
3300010361\|Ga0126378_10698767	Not Available	1126	Open in IMG/M
3300010361\|Ga0126378_11983466	Not Available	663	Open in IMG/M
3300010361\|Ga0126378_12009882	Not Available	659	Open in IMG/M
3300010361\|Ga0126378_12816781	Not Available	555	Open in IMG/M
3300010361\|Ga0126378_13465204	Not Available	500	Open in IMG/M
3300010376\|Ga0126381_104255520	Not Available	555	Open in IMG/M
3300010398\|Ga0126383_10239711	Not Available	1771	Open in IMG/M
3300010398\|Ga0126383_13234163	Not Available	532	Open in IMG/M
3300010863\|Ga0124850_1046106	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1374	Open in IMG/M
3300012096\|Ga0137389_11505797	Not Available	569	Open in IMG/M
3300012209\|Ga0137379_11137026	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	687	Open in IMG/M
3300012677\|Ga0153928_1099864	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Zavarzinella → Zavarzinella formosa	558	Open in IMG/M
3300012971\|Ga0126369_10185662	Not Available	1991	Open in IMG/M
3300012971\|Ga0126369_10527224	Not Available	1243	Open in IMG/M
3300012971\|Ga0126369_11734598	Not Available	713	Open in IMG/M
3300012971\|Ga0126369_11820502	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300016270\|Ga0182036_10666746	Not Available	839	Open in IMG/M
3300016270\|Ga0182036_11514487	Not Available	563	Open in IMG/M
3300016294\|Ga0182041_10873091	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	807	Open in IMG/M
3300016294\|Ga0182041_12004485	Not Available	539	Open in IMG/M
3300016319\|Ga0182033_11127721	Not Available	701	Open in IMG/M
3300016319\|Ga0182033_11591539	Not Available	591	Open in IMG/M
3300016341\|Ga0182035_11891036	Not Available	541	Open in IMG/M
3300016371\|Ga0182034_10371142	Not Available	1167	Open in IMG/M
3300016371\|Ga0182034_10908156	Not Available	758	Open in IMG/M
3300016371\|Ga0182034_11549285	Not Available	581	Open in IMG/M
3300016387\|Ga0182040_10111526	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1878	Open in IMG/M
3300016387\|Ga0182040_10794176	Not Available	780	Open in IMG/M
3300016404\|Ga0182037_10128109	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1879	Open in IMG/M
3300016404\|Ga0182037_10641833	Not Available	904	Open in IMG/M
3300016404\|Ga0182037_11020619	Not Available	721	Open in IMG/M
3300016422\|Ga0182039_10205822	All Organisms → cellular organisms → Bacteria	1573	Open in IMG/M
3300016422\|Ga0182039_10457081	Not Available	1095	Open in IMG/M
3300016422\|Ga0182039_10769845	All Organisms → cellular organisms → Bacteria	853	Open in IMG/M
3300016422\|Ga0182039_11127300	Not Available	707	Open in IMG/M
3300016422\|Ga0182039_11381440	Not Available	639	Open in IMG/M
3300016445\|Ga0182038_10905107	Not Available	778	Open in IMG/M
3300016445\|Ga0182038_11745004	Not Available	561	Open in IMG/M
3300017924\|Ga0187820_1181655	Not Available	648	Open in IMG/M
3300017932\|Ga0187814_10363569	Not Available	560	Open in IMG/M
3300017933\|Ga0187801_10022760	All Organisms → cellular organisms → Bacteria	2146	Open in IMG/M
3300017961\|Ga0187778_10030204	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3313	Open in IMG/M
3300017974\|Ga0187777_10123982	Not Available	1712	Open in IMG/M
3300017995\|Ga0187816_10192514	Not Available	886	Open in IMG/M
3300018058\|Ga0187766_10601896	Not Available	750	Open in IMG/M
3300021168\|Ga0210406_11115480	Not Available	580	Open in IMG/M
3300021407\|Ga0210383_10554054	Not Available	992	Open in IMG/M
3300021560\|Ga0126371_12089213	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	682	Open in IMG/M
3300021560\|Ga0126371_12243778	Not Available	659	Open in IMG/M
3300021560\|Ga0126371_12588349	Not Available	614	Open in IMG/M
3300026551\|Ga0209648_10142662	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1903	Open in IMG/M
3300026859\|Ga0207859_1015279	Not Available	671	Open in IMG/M
3300026872\|Ga0207785_1007439	Not Available	1029	Open in IMG/M
3300026876\|Ga0207837_1002485	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1930	Open in IMG/M
3300026927\|Ga0207744_1028848	Not Available	515	Open in IMG/M
3300026945\|Ga0207743_1012828	Not Available	889	Open in IMG/M
3300026982\|Ga0207854_1012072	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1158	Open in IMG/M
3300027042\|Ga0207766_1024200	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300027874\|Ga0209465_10411822	Not Available	677	Open in IMG/M
3300031057\|Ga0170834_107067277	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1619	Open in IMG/M
3300031231\|Ga0170824_126231362	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1490	Open in IMG/M
3300031469\|Ga0170819_17273744	Not Available	751	Open in IMG/M
3300031474\|Ga0170818_101439075	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Zavarzinella → Zavarzinella formosa	657	Open in IMG/M
3300031543\|Ga0318516_10047099	All Organisms → cellular organisms → Bacteria → Proteobacteria	2337	Open in IMG/M
3300031544\|Ga0318534_10224260	Not Available	1084	Open in IMG/M
3300031545\|Ga0318541_10811731	Not Available	522	Open in IMG/M
3300031679\|Ga0318561_10504659	Not Available	666	Open in IMG/M
3300031680\|Ga0318574_10345610	Not Available	867	Open in IMG/M
3300031681\|Ga0318572_10623111	Not Available	643	Open in IMG/M
3300031681\|Ga0318572_10633748	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Zavarzinella → Zavarzinella formosa	637	Open in IMG/M
3300031682\|Ga0318560_10573241	Not Available	611	Open in IMG/M
3300031708\|Ga0310686_111908259	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2977	Open in IMG/M
3300031708\|Ga0310686_114266688	Not Available	712	Open in IMG/M
3300031708\|Ga0310686_117370500	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1276	Open in IMG/M
3300031719\|Ga0306917_11537363	Not Available	511	Open in IMG/M
3300031724\|Ga0318500_10131227	Not Available	1166	Open in IMG/M
3300031744\|Ga0306918_10925865	Not Available	678	Open in IMG/M
3300031744\|Ga0306918_11475020	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	520	Open in IMG/M
3300031768\|Ga0318509_10303599	Not Available	893	Open in IMG/M
3300031768\|Ga0318509_10482921	Not Available	693	Open in IMG/M
3300031779\|Ga0318566_10260246	Not Available	860	Open in IMG/M
3300031792\|Ga0318529_10354035	Not Available	684	Open in IMG/M
3300031832\|Ga0318499_10169642	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	851	Open in IMG/M
3300031833\|Ga0310917_10242334	Not Available	1212	Open in IMG/M
3300031833\|Ga0310917_10339858	All Organisms → cellular organisms → Bacteria	1018	Open in IMG/M
3300031846\|Ga0318512_10527667	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	599	Open in IMG/M
3300031879\|Ga0306919_11351647	Not Available	538	Open in IMG/M
3300031890\|Ga0306925_10587454	All Organisms → cellular organisms → Bacteria	1177	Open in IMG/M
3300031890\|Ga0306925_11249090	Not Available	741	Open in IMG/M
3300031890\|Ga0306925_12263686	Not Available	503	Open in IMG/M
3300031893\|Ga0318536_10514712	Not Available	601	Open in IMG/M
3300031897\|Ga0318520_10057475	All Organisms → cellular organisms → Bacteria	2068	Open in IMG/M
3300031897\|Ga0318520_10997176	Not Available	529	Open in IMG/M
3300031912\|Ga0306921_10166487	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales → Vibrionaceae → Vibrio → Vibrio cidicii	2581	Open in IMG/M
3300031941\|Ga0310912_10171591	Not Available	1647	Open in IMG/M
3300031941\|Ga0310912_10184248	Not Available	1591	Open in IMG/M
3300031941\|Ga0310912_10696309	All Organisms → cellular organisms → Bacteria	788	Open in IMG/M
3300031942\|Ga0310916_10325759	Not Available	1303	Open in IMG/M
3300031945\|Ga0310913_10288246	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1157	Open in IMG/M
3300031945\|Ga0310913_10491541	Not Available	871	Open in IMG/M
3300031945\|Ga0310913_11034152	Not Available	575	Open in IMG/M
3300031945\|Ga0310913_11114772	Not Available	551	Open in IMG/M
3300031946\|Ga0310910_10211273	All Organisms → cellular organisms → Bacteria	1507	Open in IMG/M
3300031946\|Ga0310910_10637295	Not Available	844	Open in IMG/M
3300031946\|Ga0310910_11562159	Not Available	505	Open in IMG/M
3300031947\|Ga0310909_10228457	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1551	Open in IMG/M
3300031947\|Ga0310909_10525895	Not Available	991	Open in IMG/M
3300031947\|Ga0310909_10875520	Not Available	738	Open in IMG/M
3300031954\|Ga0306926_10297155	Not Available	1999	Open in IMG/M
3300031954\|Ga0306926_11431540	Not Available	800	Open in IMG/M
3300031954\|Ga0306926_11484427	Not Available	783	Open in IMG/M
3300031954\|Ga0306926_12465411	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Zavarzinella → Zavarzinella formosa	571	Open in IMG/M
3300032001\|Ga0306922_10437492	All Organisms → cellular organisms → Bacteria	1398	Open in IMG/M
3300032010\|Ga0318569_10295162	Not Available	754	Open in IMG/M
3300032025\|Ga0318507_10033272	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1940	Open in IMG/M
3300032025\|Ga0318507_10306494	Not Available	691	Open in IMG/M
3300032035\|Ga0310911_10742051	Not Available	568	Open in IMG/M
3300032039\|Ga0318559_10572259	Not Available	527	Open in IMG/M
3300032052\|Ga0318506_10473447	Not Available	555	Open in IMG/M
3300032059\|Ga0318533_10359533	Not Available	1061	Open in IMG/M
3300032060\|Ga0318505_10460676	Not Available	600	Open in IMG/M
3300032066\|Ga0318514_10319276	Not Available	822	Open in IMG/M
3300032066\|Ga0318514_10625656	Not Available	573	Open in IMG/M
3300032076\|Ga0306924_10117903	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3017	Open in IMG/M
3300032076\|Ga0306924_10150318	All Organisms → cellular organisms → Bacteria → Proteobacteria	2665	Open in IMG/M
3300032076\|Ga0306924_10355171	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1680	Open in IMG/M
3300032076\|Ga0306924_11620846	Not Available	681	Open in IMG/M
3300032090\|Ga0318518_10051457	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1960	Open in IMG/M
3300032090\|Ga0318518_10679391	All Organisms → cellular organisms → Bacteria → Proteobacteria	524	Open in IMG/M
3300032091\|Ga0318577_10270798	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ec3.3	813	Open in IMG/M
3300032094\|Ga0318540_10179524	Not Available	1018	Open in IMG/M
3300032094\|Ga0318540_10634618	Not Available	514	Open in IMG/M
3300032261\|Ga0306920_100349365	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2200	Open in IMG/M
3300032261\|Ga0306920_100718385	Not Available	1471	Open in IMG/M
3300032261\|Ga0306920_101631230	Not Available	916	Open in IMG/M
3300032261\|Ga0306920_101920490	All Organisms → cellular organisms → Bacteria	832	Open in IMG/M
3300032261\|Ga0306920_102549553	Not Available	702	Open in IMG/M
3300032261\|Ga0306920_102900181	Not Available	650	Open in IMG/M
3300033289\|Ga0310914_10467483	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1141	Open in IMG/M
3300033290\|Ga0318519_11022342	Not Available	514	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.44%
Host-Associated	Host-Associated	0.56%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.61%
Aquatic	Environmental → Aquatic	2.82%
Fungi	Host-Associated → Fungi	0.56%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.61%
Freshwater	Environmental → Aquatic → Freshwater	2.26%
Sediment	Environmental → Aquatic → Sediment	0.56%
Mycelium	Host-Associated → Fungi → Mycelium	0.56%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	77.97%
Loam	Environmental → Terrestrial → Soil → Loam	16.95%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.26%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.69%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.56%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.56%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	57.63%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.08%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	15.25%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.26%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.69%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.69%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	1.13%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.56%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.56%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.56%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.56%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	29.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.42%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	15.25%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	15.25%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.26%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.69%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.69%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.69%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.13%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.56%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.56%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.56%
Green-Waste Compost	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Green-Waste Compost	0.56%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.56%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.56%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2070309004	Green-waste compost microbial communities at University of California, Davis, USA, from solid state bioreactor - Luquillo Rain Forest, Puerto Rico	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012677	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ012 MetaG	Host-Associated	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026859	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 25 (SPAdes)	Environmental	Open in IMG/M
3300026872	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 74 (SPAdes)	Environmental	Open in IMG/M
3300026876	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 58 (SPAdes)	Environmental	Open in IMG/M
3300026927	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 56 (SPAdes)	Environmental	Open in IMG/M
3300026945	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 55 (SPAdes)	Environmental	Open in IMG/M
3300026982	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 7 (SPAdes)	Environmental	Open in IMG/M
3300027042	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 68 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
prs_02047090	2070309004	Green-Waste Compost	MKKEEAKRTTLSEYERRAKKHPNQADMMGGFLFFRYLQEERSDLLDFR
Ga0066395_105045401	3300004633	Tropical Forest Soil	MAMKQEEARRSVLSEYDSWAKKHPNQASMMGGFLFFRYLQAE
Ga0066395_109529461	3300004633	Tropical Forest Soil	MAGMKKEEARRAVVSEYDRWAKKHPNDARMMGGFLFFRYLQKEKSDLLDFR
Ga0066388_1012352361	3300005332	Tropical Forest Soil	MSKDKARQAVLSEYDNWAKKYPVDASMMGGFLFFRYLQTDRS
Ga0066388_1041480981	3300005332	Tropical Forest Soil	MKKEEARRAALSEYDRWAKKHPKDVSMMGGFLFFRYLQKER
Ga0066388_1041864302	3300005332	Tropical Forest Soil	MSKEQARLAVLSEFDSWAKKHPNDASMMGGFLFFRYLQTDKSDLLDFR
Ga0066388_1044918963	3300005332	Tropical Forest Soil	MKKEEARRAALSEYDRWAKKHPNKASMMGGFLFFRYLQKEKSD
Ga0066388_1047177633	3300005332	Tropical Forest Soil	MASMKKEEARRAVLSEYDRWAKKHPNDARMMGGFLFFRYLQKERSDL
Ga0066388_1058346671	3300005332	Tropical Forest Soil	VASVNKEESRRAALSEYDRWAKKHPNQARMMGGFLFFRYLQAERSDL
Ga0066388_1083126301	3300005332	Tropical Forest Soil	MSKEQARLAILSEYDSWAKKHPDDASMMGGFLFFRYLQTDKSDLLDF
Ga0008090_156107712	3300005363	Tropical Rainforest Soil	MSKDKARQAVLSEYDSWVKKHPGDARMMGGFLFFRYLQTDKSDLLDFRAA
Ga0070713_1002808631	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MKKEEARRAVLSEYDRWAKKHPNDATMMGGFLFFRYLQNE
Ga0070713_1024936881	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MASMKKEEARRAILSEYDRWAKKHPHDATMMGGFLFFRYLQNE
Ga0066903_1003704434	3300005764	Tropical Forest Soil	MKKEEAKLAVLSEYDRWGKKHPNDASMMGGFLFFRYLQKEKSDLLDF
Ga0066903_1016495875	3300005764	Tropical Forest Soil	MASMKKEEARRAVLSEYDRWAKKHPNDARMMGGFLFFRYLQ
Ga0066903_1039022761	3300005764	Tropical Forest Soil	MTSMKREEARRAVLSEYDRWAKKHPNDATMMGGFLFFRYLQKEKSDLLDFRAVDDEKW
Ga0066903_1074109151	3300005764	Tropical Forest Soil	MSKEEARRAVLSEYDRWAKKHPNEASMMGGFLFFRYLQEERSNLLDF
Ga0066903_1074574051	3300005764	Tropical Forest Soil	MSKDKARQAVLSEYDSWVKKHPSDARMMGGFLFFRYLQTDKSDLLDFR
Ga0066903_1075330773	3300005764	Tropical Forest Soil	MNKEEARRAILSEYDSWAKKHPNQASMMGGFLFFR
Ga0066903_1084694351	3300005764	Tropical Forest Soil	MNKEESRRAVLSEYDRWAKQHPNKASMMGGFLFFRYLQEERSDLLDFR
Ga0066903_1086383322	3300005764	Tropical Forest Soil	MSKDKARQAVLSEYDSWVKKHPDDARMMGGFLFFRYLQTDKS
Ga0066903_1089712682	3300005764	Tropical Forest Soil	MANMKKPGMTSMKKEEARRAVLSEYDRWAKKHPNDARMMGGFLFFRYLQEE
Ga0075018_105567142	3300006172	Watersheds	MKKEEARQAVLGEYDRWAKKHPNDARMMGGFLFFR
Ga0070712_1017032812	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MNKEESRRAVLSEYDSWAKKHPSQASMMGGFLFFR
Ga0079219_100473342	3300006954	Agricultural Soil	MASMKKEEARRAVLSEYDRWAKQHPNDARMMGGFLFFRYLQK
Ga0126374_112494681	3300009792	Tropical Forest Soil	MPKEQARRAVLSEYDSWAKEHPNEASMMGGFLFFRY
Ga0126373_100975115	3300010048	Tropical Forest Soil	MNKEEARRAVLSEYDSWAKKHPNQASMMGGFLFFRYLQAERSG
Ga0126373_104412593	3300010048	Tropical Forest Soil	MKKEEARRAVLSEYDRWAKKHPNDARMIGGFLFFRYLQKEKSDLLDFRPLGDKWQ*
Ga0126373_107404423	3300010048	Tropical Forest Soil	MASMKKEEARRAVLSEYDRWAKKHPNDARMMGGFLFFRYL
Ga0126373_108672561	3300010048	Tropical Forest Soil	MNKEEAIRAVVSEYDKWVKKHPNQASMMGGFLFFR
Ga0126373_127245351	3300010048	Tropical Forest Soil	MTKEEARLAVLREYNGWAKKHPDEAVIMGGFLFFRHLQTDKSDLLD
Ga0126376_101327375	3300010359	Tropical Forest Soil	MPNMKKTGMTSMKKEEAKRTVLSEYDRWAKKHPNDARMMGGFLFFRYLQKE
Ga0126376_107656022	3300010359	Tropical Forest Soil	MKKEEARRAVLNEYDRWAKKHPNKASMMGGFLFFRYLQDA
Ga0126376_113634171	3300010359	Tropical Forest Soil	MASMKKEEARRAVLGEYDRWAKKHPNDARMMGGFLFFRYLQKEKSELLDFRAVDDEK
Ga0126376_127067641	3300010359	Tropical Forest Soil	MSKEQARQAVLSEYDSWAKQHPNQASMMGGFLFFRYLQ
Ga0126372_102325581	3300010360	Tropical Forest Soil	MNKEESRRAVLSEYDSWAKKHPSQASMMGGFLFFRYLQEERSDL
Ga0126372_115467081	3300010360	Tropical Forest Soil	MPKEQARRAVLSEYDNWVKKYPVDASMMGGFLFFRH
Ga0126378_106987673	3300010361	Tropical Forest Soil	MEGMKKEEARRAVVSEYDRWAKKHPDKASMMGGFLFFRYLQ
Ga0126378_119834662	3300010361	Tropical Forest Soil	MSNMKKEEARRAVLSEYDRLAKQHPNHARMMGGFLFFRYL
Ga0126378_120098821	3300010361	Tropical Forest Soil	MSKERARQAVLSEYDSWAKKYPNDASIMGGFLFFRYLQTEKSD
Ga0126378_128167811	3300010361	Tropical Forest Soil	MNKEVARRAVLSAYDSWAKKHPSQASMMGGFLFFRY
Ga0126378_134652041	3300010361	Tropical Forest Soil	MAMKQEEARRSVLSEYDSWAKKHPNQASMMGGFLFFRYL
Ga0126381_1042555202	3300010376	Tropical Forest Soil	MSSLRKEEARRAILSEYDGWAKKHPDDAIMMGGFLFFRYLQNERSDLLNFRAVGS
Ga0126383_102397111	3300010398	Tropical Forest Soil	MSKDKARQAVLSEYDSWVKKHPDDARMMGGFLFFRYLQTDKSDLLDFRAA
Ga0126383_132341631	3300010398	Tropical Forest Soil	MKKEEARRAVLSEYDRWAKKHPNDARMMGGFLFFRYLQKEKSDLLDFRAVDDEKW
Ga0124850_10461061	3300010863	Tropical Forest Soil	MKKEEAKRTTLSEYERWAKKHHNQGDMMGGFLFFRYLQ
Ga0137389_115057971	3300012096	Vadose Zone Soil	MASVKKEEARRAVLSEYDRWAKKHPNDARMMGGFLFFRYLQK
Ga0137379_111370263	3300012209	Vadose Zone Soil	MASMKKEEARRAVLSEYDRWAKKHPNDASMMGGFLFFRYLQKE
Ga0153928_10998642	3300012677	Attine Ant Fungus Gardens	MASMKKEEARRAILGEYDKWAKKHPNDAKVMGGFLFFRYLQKERSDLL
Ga0126369_101856621	3300012971	Tropical Forest Soil	MKKEEAKRAILSEYDRWAKKHPNKASMMGGFLFFRYLQ
Ga0126369_105272241	3300012971	Tropical Forest Soil	MNKEQARRAVLTEYDRWVKNHPNQASMMGGFLFFRYLQTEKSDLLDF
Ga0126369_117345981	3300012971	Tropical Forest Soil	MIRMASIKKEEARRTVLSEYDRWAKKHPNKASMMGGFLFFRY
Ga0126369_118205021	3300012971	Tropical Forest Soil	ASMKKEEARQAVLGEYDRWAKKHPNDARMMGGFLFFR*
Ga0182036_106667461	3300016270	Soil	MNKEQARRAVLSEYDSWAKKHPNQASVMGGFLFFRYLQSERSGLLDFRAAG
Ga0182036_115144872	3300016270	Soil	MSKDKARQAVLSEFDSWAKKHPNEASMMGGFLFFRYLQTDKSDLLDFRSGDN
Ga0182041_108730912	3300016294	Soil	MSKEQARQAVLSEYDGWAKTHPNEASMMGGFLFFRYLQTDKSDLLDFR
Ga0182041_120044851	3300016294	Soil	MNKEVARRAVLSEYDSWAKKHPNQASMMGGFLFFRYLQKERSDLLDFRSAG
Ga0182033_111277211	3300016319	Soil	MASMKKEEARQAILGEYDRWAKKHPNKASMMGGFLFFRYLQDERSDL
Ga0182033_115915391	3300016319	Soil	MSKDKARQAVLSEYDSWVKRHPDEASMMGGFLFFRYL
Ga0182035_118910362	3300016341	Soil	MAIKKEEARRAVLSAYDSWAKKHPSQASMMGGFLFFRYLQT
Ga0182034_103711421	3300016371	Soil	MNKEVARRAVLSEYDSWAKKHPNQASMMGGFLFFRYLQAERSDLL
Ga0182034_109081562	3300016371	Soil	MSKEQARQAVLSEYDSCAKKHPNQASMMGGFLFFRYLQT
Ga0182034_115492852	3300016371	Soil	MAIKKEEARRAIVSAYDSWAKKYPNDASIMGGFRFFRYLQE
Ga0182040_101115264	3300016387	Soil	MSKEEARRAVLSEYDGWAKKHPNEASIMGGFLFFRYLQTDKSDLL
Ga0182040_107941762	3300016387	Soil	MNKEQARRAVLSEYDSWAKKHPNQASVMGGFLFFRYL
Ga0182037_101281091	3300016404	Soil	MSKDKARQAILSEYDSWVKKHPDDARMMGGFLFLRYLQ
Ga0182037_106418332	3300016404	Soil	MSKEQARQAVLSEYDSCAKKHPNQASMMGGFLFFRYLQ
Ga0182037_110206192	3300016404	Soil	VNKEQARRAVLSEYDSWAKKHPNDARMMGGFLFFRYLQTDRSDLLDFRGGG
Ga0182039_102058223	3300016422	Soil	MNKEQARRAVLSEYDSWAKKHPNQASMMGGFLFFRYLQQE
Ga0182039_104570812	3300016422	Soil	MAGMKKKEARRAALSEYDRWAKKHPNDARMMGGFLFFRYLQKEKSDLLDFRAVDDEK
Ga0182039_107698452	3300016422	Soil	MSKDKARQAVLSEFDSWAKKHPNEASMMGGFLFFR
Ga0182039_111273001	3300016422	Soil	MSKDKARQAVLSEYDSWAKKYPNDASIMGGFLFFRYLQTEK
Ga0182039_113814401	3300016422	Soil	QVCMTSMKKEEARRAVLSEYDRWAKKHPSDARMMGGFLFF
Ga0182038_109051072	3300016445	Soil	MPKDKARQAVLSEFDSWAKKHPNEASMMGGFLFFRYLQTDKSDLLDFRAAD
Ga0182038_117450041	3300016445	Soil	MKKEEARQAVLSEYDRWAKKHPNDASGFLFFRYLQNDRSDLLDFRANGESGKS
Ga0187820_11816551	3300017924	Freshwater Sediment	MSSVRKEEARRAILSEYDGWAKKHPDDAIMMGGFLFFRYLQSERSDL
Ga0187814_103635691	3300017932	Freshwater Sediment	MANVKKEDARRAILSEYDGWAKKHPDEAIMMGGFLFFRYLQNERSNLLDFRAVGSK
Ga0187801_100227601	3300017933	Freshwater Sediment	VTGMASMKKEEARRAVLSEYDSWAKKHPNDARMMGGFLFFRYLQKER
Ga0187778_100302041	3300017961	Tropical Peatland	MSSVRKEESRRAIRSEYDGWAKKHPDDAILMGGFLFFRYLQN
Ga0187777_101239824	3300017974	Tropical Peatland	MASIKKEEARRAVLSEYDTWANKHPNDASIMGGFLFFRYLQTERSDLLDFRVVGNK
Ga0187816_101925141	3300017995	Freshwater Sediment	MANVKKEDARREVLREYDRWAKKHPEDAAIMGGFRFFRYLQNERSDLLDFRA
Ga0187766_106018961	3300018058	Tropical Peatland	MSSVRNEEARRAILSEYDGWAKKHPDDAIMMGGFLFFRYLQNERSDLLDFRA
Ga0210406_111154801	3300021168	Soil	MSSMKKEEARRAVLSEYDRWAKKHPNKASMMGGFLF
Ga0210383_105540541	3300021407	Soil	MKKEEARRAILSEYDRWAKKHPHDATMMGGFLFFRYLQ
Ga0126371_120892132	3300021560	Tropical Forest Soil	MKKEEAKRTILSEYDRWAKKHPNQASMMGGFLFFRYL
Ga0126371_122437781	3300021560	Tropical Forest Soil	MASMKKEEARRAVLSEYDRWAKKHPNKASMMGGFLFFRYLQDEKSDLLD
Ga0126371_125883491	3300021560	Tropical Forest Soil	MNKEESRRAVLSEYDRWAKQHPNKASMMGGFLFFRYLQEERSDLLDFRAVGN
Ga0209648_101426621	3300026551	Grasslands Soil	MASKKKEEARRAVLSEYDRWAKKHPNDASMMGGFLFFRYLQEERS
Ga0207859_10152792	3300026859	Tropical Forest Soil	MSKEQATRAVLSAYDSWAKKHPNDAIIMGGFLFFRYLQQDRLDLLDFREAGNK
Ga0207785_10074391	3300026872	Tropical Forest Soil	MVRRAQTWVCVASMNKEEARRAVLSEYDSWAKKHPNQASMMGGFLFFRYLQAERSDLLDFRT
Ga0207837_10024852	3300026876	Tropical Forest Soil	MSKEKARLAVLSEFDSWAKKHPNDASMMGGFLFFRYLQTDKSDLLDFRTAGSVRHQSF
Ga0207744_10288481	3300026927	Tropical Forest Soil	MSKEQARQVVLSEYDSWAKNHPNEASMMGGFLFFRYLQS
Ga0207743_10128281	3300026945	Tropical Forest Soil	MNKEVARRAVLGEYDRWVKIHPNQASMMGGFLFFRYLQKERSDLLDFRSA
Ga0207854_10120723	3300026982	Tropical Forest Soil	MSKEQARLAVFSEYDSWAKKHPNDASMMGGFLFFRYLQAERSDLLD
Ga0207766_10242001	3300027042	Tropical Forest Soil	MSKEQARLAVFSEYDSWAKKHPNDASIMGGFLFFRYLQTDKSDPLDFRAVDNKW
Ga0209465_104118221	3300027874	Tropical Forest Soil	MKKEEARQAVLGEYDRWAKKHPNKASMMGGFLFFRYLQAERSDL
Ga0170834_1070672774	3300031057	Forest Soil	MKKEEARRAVVSEYDRWAKKHPNDARMMGGFLFFRYLQEERSDLLDF
Ga0170824_1262313623	3300031231	Forest Soil	MKKEEARRAVVSEYDRWAKKHPNDARMMGGFLFFRYLQEERSDLLDFRAIGDD
Ga0170819_172737443	3300031469	Forest Soil	MKKEEARQAVLGEYERWAKKHLNDARMMGGFLFFRYLQKEKSDLL
Ga0170818_1014390753	3300031474	Forest Soil	MASMKKEEARRAVLSEYDRWAKKHPNDASMMGGFLF
Ga0318516_100470995	3300031543	Soil	MSKDKARQAVLSEYDGWAKKHPNEASMMGGFLFFRYLQT
Ga0318534_102242601	3300031544	Soil	MSKDKARQAVLSEYDSWVKKHPDDARMMGGFLFFRYLQTD
Ga0318541_108117311	3300031545	Soil	MSKDKARQAVLSEYDNWAKKYPVDASMMGGFLFFRYLQTDKAD
Ga0318561_105046593	3300031679	Soil	MASMKKEEARQAVLGEYDRWAKKHPNKASMMGGFLFFRYL
Ga0318574_103456102	3300031680	Soil	MSKEEARRAVLSAYDSWAKKHPDDASIMGGFLFFRFLQTDRSDLLDFRGAGNK
Ga0318572_106231111	3300031681	Soil	MSKEEARRAVLSAYESWAKKHPDDASIMGGFLFFRY
Ga0318572_106337482	3300031681	Soil	MASMKKEEARRAVLSEYDRWAKKHPNDASMMGGFLFFRYLQKERSDLLDFRSVGD
Ga0318560_105732411	3300031682	Soil	MSKEEARRAVLSAYDSWAKKHPDDASIMGGFLFFRFLQTDRSDLL
Ga0310686_1119082591	3300031708	Soil	MSSVKKEEARRAILSEYAGWAKKHPDDAIMMGGFLFFRYLQN
Ga0310686_1142666882	3300031708	Soil	MASMKKEEARQAVLGEYDRWAKKHPNDASMMGGFLFFRYLQKERSDLLDFRSVGD
Ga0310686_1173705001	3300031708	Soil	MASMKKEEARRAVLSLYDRWAKKHPDDAAMMGGFLFFRYLQNERSDLLDFRAVGDKDPLKRRGA
Ga0306917_115373632	3300031719	Soil	MPKDKARQAVLSEFDSWAKKHPNEASMMGGFLFFRYLQTDKSDLLDFRA
Ga0318500_101312271	3300031724	Soil	MSKEEARRAVLSAYDSWAKKHPDDASIMGGFLFFRYLQKEKSDLLDFRAVDDEKWQ
Ga0306918_109258651	3300031744	Soil	SMKKEEARQAVLGEYDRWAKKHPNKASMMGGFLFFRYLQDERSDLLEFRAVGDEK
Ga0306918_114750202	3300031744	Soil	MKKEAAKRTVLSEYDRWAKKHPNQANMMGGFLFFRYLQEERSDLLDFRAA
Ga0318509_103035991	3300031768	Soil	MSKEEARRAVLSEYDGWAKKHLNEASIMGGFLFFRYLQTD
Ga0318509_104829211	3300031768	Soil	MPAGDMASMKKEEARQAVLGEYDRWAKKHPNKASMMGGFLFFRYLQDERSDLLEF
Ga0318566_102602462	3300031779	Soil	MSKEQARLAVLSEFDGWAKKHPDDARMMGGFLFFRYLQTDK
Ga0318529_103540353	3300031792	Soil	MPAGDMASMKKEEARQAVLGEYDRWAKKHPNKASMMGGFLFFRYLQDE
Ga0318499_101696421	3300031832	Soil	MSKDKARQAVLSEYDGWAKKHPNEASMMGGFLFFRYLQTDKS
Ga0310917_102423343	3300031833	Soil	MAIKEEEARRAVLSAYDSWAKKHPNQASMMGGFLFFRYLQTDRSDLLDFRAVGN
Ga0310917_103398581	3300031833	Soil	MSKDKARQAVLSEYDSWAKKHRDQASMMGGFLFFRYLQTDKS
Ga0318512_105276672	3300031846	Soil	MSKDKARQAVLSEYDGWAKKHPNEASMMGGFLFFRYLQTDKSDLLDFRAADN
Ga0306919_113516471	3300031879	Soil	MSKEKARLAVLSEFDSWAKKHPNDASMMGGFLFFRYLQTDKSDLLD
Ga0306925_105874542	3300031890	Soil	MSKEQARLAVLSEYDSWAKKHPNDASIMGGFLFFRYLQTDKLDLL
Ga0306925_112490902	3300031890	Soil	MNKEQARRAVLSEYDSWAKKHPNQASVMGGFLFFRYLQSERSGLLD
Ga0306925_122636861	3300031890	Soil	MAMKKEDSRRAVLTEYDRWAKQHPNQASMMGGFLFFRYFRQKGRIF
Ga0318536_105147121	3300031893	Soil	MSKEEARRAVLSEYDGWAKKHPNQASMMGGFLFFRYLQ
Ga0318520_100574751	3300031897	Soil	MSKDKARQAVLSEYDGWAKKHPNEASMMGGFLFFRYLQ
Ga0318520_109971761	3300031897	Soil	MSKDKARQAVLSEYDNWAEKYPVDASMMGGFLFFRYLQTDRAD
Ga0306921_101664871	3300031912	Soil	MSKDKARQAVLSEFDSWAKKHPNEASMMGGFLFFRYLQTDKSDLLDFRAAD
Ga0310912_101715911	3300031941	Soil	MNKEEAIRAVVSEYDKWVKKHPNQASMMGGFLFFRYLQKEKSDLLDFRGAGNK
Ga0310912_101842481	3300031941	Soil	MSKEEARRAVLSAYDSWAKKHPHDASIMGGFLFFRYLQKEKSDLLDFRAVDDEKWQ
Ga0310912_106963091	3300031941	Soil	MSKDKARQAVLSEYDSWVKRHPDEASMMGGFLFFRYLQADRSDLLDFRSVGN
Ga0310916_103257591	3300031942	Soil	MSKEEARRAVLSAYDSWAKKHPDDASIMGGFLFFRYLQKEKSDLLDFRAVDDEK
Ga0310913_102882463	3300031945	Soil	MSKDKARQAVLSEYDSWVKKYPNDARMMGGFLFFRYLQT
Ga0310913_104915411	3300031945	Soil	MSKEQARLAVLSEYDSWAKKHPNDASIMGGFLFFRYLQTDKSDLLDFRAA
Ga0310913_110341521	3300031945	Soil	MSKEQARQAVLSEYDGWVKKHPDDARMMGGFLFFRYLQT
Ga0310913_111147721	3300031945	Soil	MASVKKEEARRAVLSEYDRWAKKHPNKASMMGGFLFFRYLQDEKSDLLDFRAVG
Ga0310910_102112731	3300031946	Soil	MPKDKARQAVLSEFDSWAKKHPNEASMMGGFLFFRYLQTDKSDLLDFR
Ga0310910_106372952	3300031946	Soil	MASMKKEEARQAILGEYDRWAKKHPNKASMMGGFLFFRYLQDERSDLLEFRAVGDEK
Ga0310910_115621591	3300031946	Soil	VNKEQARRAVLSEYDSWAKKHPNQASMMGGFLFFRYLQEERSDLLD
Ga0310909_102284571	3300031947	Soil	MSKEQARLAVLSEFDGWAKKHPDDARMMGGFLFFRYLQTDKSDL
Ga0310909_105258952	3300031947	Soil	MSSVRKEEARRAILSEYDGWAKKHPDDAILMGGFLFFRYLQNERSDLLDFRAVGSK
Ga0310909_108755202	3300031947	Soil	MSKDKARQAVLSEYDGWAKKHPNEASMMGGFLFFRYLQTDKSDLLDFRAAGSKW
Ga0306926_102971551	3300031954	Soil	MSKEQARLAVLSEFDSWAKKHPNDASMMGGFLFFRYLQTD
Ga0306926_114315401	3300031954	Soil	MSKEQARLAVLSEFDGWAKKHPDDARMMGGFLFFRYL
Ga0306926_114844272	3300031954	Soil	MSKEEARRAVLSAYDSWAKKHPDQASMMGGFLFFRYL
Ga0306926_124654112	3300031954	Soil	MKKEEARQAVLGEYDRWAKKHPNDARMMGGFLFFRYLQKEKSDLLDFRAVD
Ga0306922_104374923	3300032001	Soil	MNKEVARRAVLGEYDRWVKFHPNQASMMGGFLFFRY
Ga0318569_102951622	3300032010	Soil	MSKEQARLAVLSEFDGWAKKHPDDARMMGGFLFFRYLQTDKSDLLDFRSG
Ga0318507_100332721	3300032025	Soil	MPAGDMASMKKEEARQAVLGEYDRWAKKHPNKASMMGGFLFFR
Ga0318507_103064941	3300032025	Soil	MSKDKARQAVLSEYDNWAKKYPVDASMMGGFRFFRYLQSEKSDLLDFR
Ga0310911_107420511	3300032035	Soil	MAGMKKKEARRAALSEYDRWAKKHPNDARMMGGFLFFRYLQKEKSDLLDF
Ga0318559_105722591	3300032039	Soil	MSKEEARRAVLSEYDGWAKKHPNQASMMGGFLFFRYLQAERSG
Ga0318506_104734471	3300032052	Soil	MSKEEARRAVLSAYDSWAKKHPDDASIMGGFLFFRFLQTDR
Ga0318533_103595331	3300032059	Soil	MSKDKARQAVLCEYDSWVKKHPDDARMMGGFLFFRYLQTDK
Ga0318505_104606761	3300032060	Soil	MSKEQARLAVLSEFDGWAKKHPDDARMMGGFLFFRYLQT
Ga0318514_103192761	3300032066	Soil	MPAGDMASMKKEEARQAVLGEYDRWAKKHPNKASMMGGFLFFRYLQDERSDLLEFRARREVAN
Ga0318514_106256561	3300032066	Soil	MPKDKARQAVLSEFDSWAKKHPNEASMMGGFLFFRYLQT
Ga0306924_101179031	3300032076	Soil	MAIKEEEARRAVLSAYDSWAKKHPNQASMMGGFLFFRYLQTDRSD
Ga0306924_101503185	3300032076	Soil	MSKDKARQAVLSEYDGWAKKHPNEASMMGGFLFFRYL
Ga0306924_103551714	3300032076	Soil	MKKEEARRAVLSEYDRWAKKHPNDARMMGGFLFFRYLQKEK
Ga0306924_116208461	3300032076	Soil	MAIKKEEARRAIVSAYDSWAKKYPNDASIMGGFRFFRY
Ga0318518_100514571	3300032090	Soil	MSKDKARQAILSEYDSWVKKHPDDARMMGGFLFFRY
Ga0318518_106793911	3300032090	Soil	MAMKQEDSRRAVLTEYDRWAKQHPNQASMMGGFLFFRYLQVE
Ga0318577_102707981	3300032091	Soil	MALKKEEARRAVLSEYDSWAKKNPANMMGGFLFFRYLQE
Ga0318540_101795243	3300032094	Soil	MSKEKARLAVLSEFDSWAKKHPNDASMMGGFLFFRYLQTDKSDLLDFR
Ga0318540_106346182	3300032094	Soil	MKKEEARRAVLSEYDRCAKKHPNDARMMGGFLFFRYLHLTT
Ga0306920_1003493653	3300032261	Soil	MAMKQEEARRSVLSEYDSWAKKHPNQASMMGGFLFF
Ga0306920_1007183854	3300032261	Soil	MSKEQARLAILSEYDSWAKKHPDDASMMGGFLFFRYLQTDKSDLLDFR
Ga0306920_1016312301	3300032261	Soil	MSKEQARQAVLSEYDSCAKKHPNQASMMGGFLFFRYLQTDKSD
Ga0306920_1019204901	3300032261	Soil	MSSVKKEEARRAVLNEYDRWAKKHPNKASMMGGFLFFRYLQDEKSDLLDFRAVG
Ga0306920_1025495531	3300032261	Soil	MALKKEKARREVLSEYDSWAKKHPNDARMMGGFLFFRYLQAE
Ga0306920_1029001811	3300032261	Soil	MSKEQARQAVVSESDSWAKKHPNEASMMGGFLFFRYLQTDKSDLLDFRGSD
Ga0310914_104674831	3300033289	Soil	MSKDKARQAVLSEYDSWVKKNPDDARMMGGFLFFRYLQTDK
Ga0318519_110223421	3300033290	Soil	MKKEEARQAVLGEYDTWAKKHPNDARMMGGFLFFRYLQKEKSDLLDFRAVDDEK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F033580

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences