Metagenome / Metatranscriptome Family F033785

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F033785
Family Type	Metagenome / Metatranscriptome
Number of Sequences	176
Average Sequence Length	41 residues
Representative Sequence	MDQLILKRASASRLSGEWNDDDYDVLADGAVVGRIMKA
Number of Associated Samples	113
Number of Associated Scaffolds	176

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	53.12 %
% of genes near scaffold ends (potentially truncated)	58.52 %
% of genes from short scaffolds (< 2000 bps)	68.18 %
Associated GOLD sequencing projects	106
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (59.659 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (33.523 % of family members)
Environment Ontology (ENVO)	Unclassified (51.136 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (56.818 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 24.24% Coil/Unstructured: 75.76%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 176 Family Scaffolds
PF04392	ABC_sub_bind	12.50
PF00994	MoCF_biosynth	1.70
PF06035	Peptidase_C93	1.70
PF02735	Ku	1.70
PF09509	Hypoth_Ymh	1.14
PF03401	TctC	0.57
PF00072	Response_reg	0.57
PF13458	Peripla_BP_6	0.57
PF13432	TPR_16	0.57
PF00034	Cytochrom_C	0.57
PF12399	BCA_ABC_TP_C	0.57
PF12800	Fer4_4	0.57
PF01609	DDE_Tnp_1	0.57
PF02586	SRAP	0.57
PF01722	BolA	0.57
PF17201	Cache_3-Cache_2	0.57
PF00005	ABC_tran	0.57
PF07536	HWE_HK	0.57
PF05974	DUF892	0.57
PF00580	UvrD-helicase	0.57
PF00313	CSD	0.57
PF04909	Amidohydro_2	0.57
PF13560	HTH_31	0.57
PF04828	GFA	0.57
PF14534	DUF4440	0.57
PF10108	DNA_pol_B_exo2	0.57
PF13936	HTH_38	0.57
PF07726	AAA_3	0.57
PF01068	DNA_ligase_A_M	0.57
PF03592	Terminase_2	0.57
PF13185	GAF_2	0.57
PF13796	Sensor	0.57

COG ID	Name	Functional Category	% Frequency in 176 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	12.50
COG1273	Non-homologous end joining protein Ku, dsDNA break repair	Replication, recombination and repair [L]	1.70
COG3672	Predicted transglutaminase-like protein	Posttranslational modification, protein turnover, chaperones [O]	1.70
COG0210	Superfamily I DNA or RNA helicase	Replication, recombination and repair [L]	0.57
COG1074	3Ã¢â‚¬â„¢-5Ã¢â‚¬â„¢ helicase subunit RecB of the DNA repair enzyme RecBCD (exonuclease V)	Replication, recombination and repair [L]	0.57
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	0.57
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.57
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	0.57
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.57
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.57
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.57
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.57
COG3685	Ferritin-like metal-binding protein YciE	Inorganic ion transport and metabolism [P]	0.57
COG3728	Phage terminase, small subunit	Mobilome: prophages, transposons [X]	0.57
COG3791	Uncharacterized conserved protein	Function unknown [S]	0.57
COG3920	Two-component sensor histidine kinase, HisKA and HATPase domains	Signal transduction mechanisms [T]	0.57
COG3973	DNA helicase IV	Replication, recombination and repair [L]	0.57
COG4251	Bacteriophytochrome (light-regulated signal transduction histidine kinase)	Signal transduction mechanisms [T]	0.57
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.57
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.57
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.57

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	59.66 %
Unclassified	root	N/A	40.34 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	59.66 %
Unclassified	root	N/A	40.34 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	59.66 %
Unclassified	root	N/A	40.34 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	51.70 %
Unclassified	root	N/A	40.34 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.57 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.57 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	47.73 %
Unclassified	root	N/A	40.34 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.57 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.57 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.34 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	32.39 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7.39 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.57 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.57 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.34 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	30.68 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4.55 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.70 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.57 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.57 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	0.57 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.34 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	30.68 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3.41 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.70 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	0.57 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	0.57 %
Tardiphaga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Tardiphaga	0.57 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.57 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.34 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	30.68 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.70 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	1.14 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1.14 %
Microvirga calopogonii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga calopogonii	0.57 %
unclassified Tardiphaga	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Tardiphaga → unclassified Tardiphaga	0.57 %
Gimesia	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Gimesia	0.57 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.57 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.34 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	30.68 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.70 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1.14 %
Bradyrhizobium sp. Gha	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Gha	0.57 %
Gimesia fumaroli	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Gimesia → Gimesia fumaroli	0.57 %
Tardiphaga sp. vice352	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Tardiphaga → unclassified Tardiphaga → Tardiphaga sp. vice352	0.57 %
Bradyrhizobium sp. URHD0069	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	0.57 %
Microvirga calopogonii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga calopogonii	0.57 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.57 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.57 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000597\|AF_2010_repII_A1DRAFT_10043969	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1176	Open in IMG/M
3300000837\|AP72_2010_repI_A100DRAFT_1015379	Not Available	1075	Open in IMG/M
3300000956\|JGI10216J12902_101579924	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1135	Open in IMG/M
3300002245\|JGIcombinedJ26739_100935683	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	750	Open in IMG/M
3300004268\|Ga0066398_10107014	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	656	Open in IMG/M
3300004463\|Ga0063356_102490528	Not Available	793	Open in IMG/M
3300005163\|Ga0066823_10015476	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1130	Open in IMG/M
3300005332\|Ga0066388_102182152	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	999	Open in IMG/M
3300005332\|Ga0066388_102183765	All Organisms → cellular organisms → Bacteria	998	Open in IMG/M
3300005332\|Ga0066388_106432076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	592	Open in IMG/M
3300005332\|Ga0066388_108759084	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	502	Open in IMG/M
3300005364\|Ga0070673_101199755	Not Available	711	Open in IMG/M
3300005471\|Ga0070698_100860460	Not Available	852	Open in IMG/M
3300005713\|Ga0066905_101111726	Not Available	702	Open in IMG/M
3300005764\|Ga0066903_100673704	Not Available	1815	Open in IMG/M
3300005764\|Ga0066903_101788857	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1173	Open in IMG/M
3300005764\|Ga0066903_103244363	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	879	Open in IMG/M
3300005764\|Ga0066903_103259389	Not Available	877	Open in IMG/M
3300005764\|Ga0066903_104422027	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300005764\|Ga0066903_105303422	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	681	Open in IMG/M
3300005764\|Ga0066903_105389365	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	675	Open in IMG/M
3300005764\|Ga0066903_105507882	Not Available	667	Open in IMG/M
3300005764\|Ga0066903_105705837	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	654	Open in IMG/M
3300006576\|Ga0074047_11580297	Not Available	526	Open in IMG/M
3300006791\|Ga0066653_10130212	Not Available	1194	Open in IMG/M
3300006904\|Ga0075424_101992740	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	613	Open in IMG/M
3300009792\|Ga0126374_10047178	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2158	Open in IMG/M
3300009792\|Ga0126374_10394891	Not Available	964	Open in IMG/M
3300010046\|Ga0126384_10999049	All Organisms → cellular organisms → Bacteria	762	Open in IMG/M
3300010047\|Ga0126382_11885889	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	565	Open in IMG/M
3300010358\|Ga0126370_10611116	Not Available	943	Open in IMG/M
3300010359\|Ga0126376_12408026	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	573	Open in IMG/M
3300010359\|Ga0126376_12454438	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	569	Open in IMG/M
3300010360\|Ga0126372_10528740	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1115	Open in IMG/M
3300010361\|Ga0126378_11411007	All Organisms → cellular organisms → Bacteria	789	Open in IMG/M
3300010366\|Ga0126379_12526679	Not Available	612	Open in IMG/M
3300010398\|Ga0126383_10502396	All Organisms → cellular organisms → Bacteria	1271	Open in IMG/M
3300010398\|Ga0126383_11152871	Not Available	865	Open in IMG/M
3300010398\|Ga0126383_11413069	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	786	Open in IMG/M
3300010398\|Ga0126383_12736736	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	576	Open in IMG/M
3300010398\|Ga0126383_13304670	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	527	Open in IMG/M
3300012205\|Ga0137362_11147685	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Gimesia → Gimesia fumaroli	660	Open in IMG/M
3300012211\|Ga0137377_10423036	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1270	Open in IMG/M
3300012354\|Ga0137366_10625743	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	771	Open in IMG/M
3300012358\|Ga0137368_10291348	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1108	Open in IMG/M
3300012358\|Ga0137368_10571311	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	721	Open in IMG/M
3300012362\|Ga0137361_11269666	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	660	Open in IMG/M
3300012961\|Ga0164302_10527491	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	840	Open in IMG/M
3300012971\|Ga0126369_11245837	All Organisms → cellular organisms → Bacteria	834	Open in IMG/M
3300016270\|Ga0182036_10985494	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	694	Open in IMG/M
3300016294\|Ga0182041_10189866	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1626	Open in IMG/M
3300016319\|Ga0182033_10063608	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2565	Open in IMG/M
3300016319\|Ga0182033_10965192	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	757	Open in IMG/M
3300016319\|Ga0182033_11068076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	720	Open in IMG/M
3300016341\|Ga0182035_10235733	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1469	Open in IMG/M
3300016357\|Ga0182032_10334827	All Organisms → cellular organisms → Bacteria	1206	Open in IMG/M
3300016357\|Ga0182032_10485952	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1013	Open in IMG/M
3300016404\|Ga0182037_10328201	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1239	Open in IMG/M
3300016404\|Ga0182037_10762014	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	832	Open in IMG/M
3300016404\|Ga0182037_11276997	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300016445\|Ga0182038_10449713	Not Available	1090	Open in IMG/M
3300016445\|Ga0182038_10775129	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	839	Open in IMG/M
3300018468\|Ga0066662_11535387	All Organisms → cellular organisms → Bacteria → Proteobacteria	693	Open in IMG/M
3300021372\|Ga0213877_10232454	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	607	Open in IMG/M
3300021439\|Ga0213879_10191885	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	605	Open in IMG/M
3300021560\|Ga0126371_11483373	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	807	Open in IMG/M
3300021560\|Ga0126371_11838956	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	726	Open in IMG/M
3300021560\|Ga0126371_12906248	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	581	Open in IMG/M
3300025922\|Ga0207646_10463908	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Tardiphaga → unclassified Tardiphaga → Tardiphaga sp. vice352	1142	Open in IMG/M
3300026551\|Ga0209648_10479958	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	741	Open in IMG/M
3300028720\|Ga0307317_10256111	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	591	Open in IMG/M
3300028784\|Ga0307282_10002570	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6660	Open in IMG/M
3300028878\|Ga0307278_10346656	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	655	Open in IMG/M
3300028884\|Ga0307308_10394532	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	663	Open in IMG/M
3300031170\|Ga0307498_10435837	Not Available	523	Open in IMG/M
3300031543\|Ga0318516_10132650	Not Available	1425	Open in IMG/M
3300031549\|Ga0318571_10346527	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	569	Open in IMG/M
3300031572\|Ga0318515_10190821	All Organisms → cellular organisms → Bacteria → Proteobacteria	1097	Open in IMG/M
3300031572\|Ga0318515_10194432	Not Available	1086	Open in IMG/M
3300031573\|Ga0310915_10655333	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	742	Open in IMG/M
3300031573\|Ga0310915_10839341	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	645	Open in IMG/M
3300031640\|Ga0318555_10327182	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	830	Open in IMG/M
3300031668\|Ga0318542_10077712	All Organisms → cellular organisms → Bacteria	1566	Open in IMG/M
3300031668\|Ga0318542_10651057	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	550	Open in IMG/M
3300031668\|Ga0318542_10690711	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	533	Open in IMG/M
3300031681\|Ga0318572_10069404	All Organisms → cellular organisms → Bacteria	1937	Open in IMG/M
3300031681\|Ga0318572_10185921	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Gha	1210	Open in IMG/M
3300031682\|Ga0318560_10626696	All Organisms → cellular organisms → Bacteria → Proteobacteria	582	Open in IMG/M
3300031682\|Ga0318560_10754647	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	525	Open in IMG/M
3300031713\|Ga0318496_10141991	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1308	Open in IMG/M
3300031719\|Ga0306917_11180333	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	595	Open in IMG/M
3300031736\|Ga0318501_10029729	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2403	Open in IMG/M
3300031748\|Ga0318492_10376829	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	745	Open in IMG/M
3300031763\|Ga0318537_10380974	Not Available	520	Open in IMG/M
3300031770\|Ga0318521_10614197	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300031770\|Ga0318521_10801075	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	574	Open in IMG/M
3300031770\|Ga0318521_11003813	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	512	Open in IMG/M
3300031771\|Ga0318546_10572943	All Organisms → cellular organisms → Bacteria	793	Open in IMG/M
3300031780\|Ga0318508_1014918	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1815	Open in IMG/M
3300031782\|Ga0318552_10067284	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1725	Open in IMG/M
3300031793\|Ga0318548_10247496	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	876	Open in IMG/M
3300031796\|Ga0318576_10222284	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	889	Open in IMG/M
3300031821\|Ga0318567_10236679	Not Available	1024	Open in IMG/M
3300031833\|Ga0310917_10503291	Not Available	824	Open in IMG/M
3300031846\|Ga0318512_10155922	Not Available	1103	Open in IMG/M
3300031890\|Ga0306925_11430049	All Organisms → cellular organisms → Bacteria → Proteobacteria	680	Open in IMG/M
3300031910\|Ga0306923_10031434	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5734	Open in IMG/M
3300031910\|Ga0306923_11845605	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	619	Open in IMG/M
3300031912\|Ga0306921_10105729	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3266	Open in IMG/M
3300031941\|Ga0310912_10778715	All Organisms → cellular organisms → Bacteria → Proteobacteria	739	Open in IMG/M
3300031941\|Ga0310912_11048199	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	624	Open in IMG/M
3300031945\|Ga0310913_10262697	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1214	Open in IMG/M
3300031945\|Ga0310913_10554574	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga calopogonii	815	Open in IMG/M
3300031946\|Ga0310910_10080247	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2375	Open in IMG/M
3300031959\|Ga0318530_10191175	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	838	Open in IMG/M
3300032001\|Ga0306922_10153947	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2459	Open in IMG/M
3300032043\|Ga0318556_10079194	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1638	Open in IMG/M
3300032043\|Ga0318556_10334279	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	792	Open in IMG/M
3300032044\|Ga0318558_10203355	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	966	Open in IMG/M
3300032059\|Ga0318533_11337420	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	523	Open in IMG/M
3300032063\|Ga0318504_10189299	All Organisms → cellular organisms → Bacteria → Proteobacteria	958	Open in IMG/M
3300032076\|Ga0306924_10436921	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1496	Open in IMG/M
3300032261\|Ga0306920_100632053	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1582	Open in IMG/M
3300032261\|Ga0306920_100665737	Not Available	1536	Open in IMG/M
3300032261\|Ga0306920_102073752	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	794	Open in IMG/M
3300032261\|Ga0306920_103798848	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	552	Open in IMG/M
3300032261\|Ga0306920_103831500	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	549	Open in IMG/M
3300033289\|Ga0310914_11300936	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	629	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.73%
Host-Associated	Host-Associated	2.27%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.73%
Plants	Host-Associated → Plants	2.27%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.73%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.70%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.57%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	83.52%
Loam	Environmental → Terrestrial → Soil → Loam	14.20%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.14%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.57%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.57%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	52.84%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.93%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.14%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.57%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	33.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.18%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	14.77%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	11.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.98%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.84%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.84%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.14%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	1.14%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.14%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.14%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.57%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.57%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.57%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000837	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A100	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005163	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006576	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300021372	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R01	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021439	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R03	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A1DRAFT_100439694	3300000597	Forest Soil	VDELILKRAAASRPSGEWSDDDYDVVCEGAVVGRIMKAAAAPAGQPW
AP72_2010_repI_A100DRAFT_10153791	3300000837	Forest Soil	MDALILKRAPASRLSGEWSDDDYDVLADGRVVGRIMKAA
JGI1027J12803_1070161414	3300000955	Soil	MEKDYLVLKRAPASRPSGEWNDDDYDVLADGVVVGRIFKVH
JGI10216J12902_1015799241	3300000956	Soil	MSSLILKSASASRPSGEWNDDDYDVLADGAVVGRI
JGIcombinedJ26739_1009356831	3300002245	Forest Soil	LDKDYLTLKRASRAARQATGDDDFDVLADGAIVGRILKVH
Ga0066398_101070141	3300004268	Tropical Forest Soil	MDKDYLILKRASTSRSSGEWNDDDYDVLADGAIVGRIMKAAAV
Ga0063356_1024905282	3300004463	Arabidopsis Thaliana Rhizosphere	MSTLILKRASANRRSGQWSDNDYDVLADGVVVGRIMKAAAKPADASW
Ga0066823_100154761	3300005163	Soil	LDKDYLTLKRASASRPSGDCNDDDFDVLADGVVVGRIMKAAA
Ga0066388_1021821523	3300005332	Tropical Forest Soil	VLDNLQLVLKRASASRSSGEWDDDDFDVLADGVVVGRIMKAAAVP
Ga0066388_1021837652	3300005332	Tropical Forest Soil	MDKDYLVLKRAPTSRSSGEWSDDDYDVLADGDVVGRIFKVHAAPVG
Ga0066388_1064320762	3300005332	Tropical Forest Soil	MGQLVLKRASASRLSGEWNDDDYDVLCEDAVVGRIMKAAAAPLASVEA*
Ga0066388_1087590842	3300005332	Tropical Forest Soil	MDKDYLVLKRASTSRSSGEWSDDDFDVLADGVVVARNSR*
Ga0070673_1011997551	3300005364	Switchgrass Rhizosphere	MSTLILKRASANRRSGQWSDNDYDVLAGGVVVGRIMKAAAKPAD
Ga0070710_108591151	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MEKDYLVLKRASASRTSGEWREDDFDVLADGVVVGRIMKAEAAPVG
Ga0070706_1003278081	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MGQLVLKRASASRPSGHWYDDDYDVLCEGEVVGRIMKAAAAPVGQPWL
Ga0070698_1008604601	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	ASQLRTMLILKRSSANRASSEWNDDDYDVLAEGGVVGRI*
Ga0066692_107776042	3300005555	Soil	MDKDYLALKRASASRPSGEWGENDYDVLSDGVVVGRIVKAAA
Ga0066905_1011117263	3300005713	Tropical Forest Soil	MDKDYLILKRASTSRSSGEWSDDDYDVLADGLVVGRAAAL*
Ga0066905_1015692071	3300005713	Tropical Forest Soil	MEKDYLILKRASASRPSGEWNEDDYDVLAEGVVVGRIMK
Ga0066903_1006737041	3300005764	Tropical Forest Soil	MDKDYLVLKRASTSRSSGEWNDDDYDVVADGAVVGLS*
Ga0066903_1017888572	3300005764	Tropical Forest Soil	MDKDYLVLKRASLSRPSGKWNDDDFDVLADGVVIGRIMKAAASPVIRK*
Ga0066903_1032443631	3300005764	Tropical Forest Soil	MDKDYLVLKRASTSRSSGEWNDDDYDVLADGAVVGRILKVHGRP*
Ga0066903_1032593892	3300005764	Tropical Forest Soil	MDQLALKRATASRLSGEWSDDDYDVLAEGIVVGSIM*
Ga0066903_1044220271	3300005764	Tropical Forest Soil	MDKDYLVLKRASTSRSSGEWSDDDYDVLADGDVVGRIF
Ga0066903_1049336232	3300005764	Tropical Forest Soil	MEKDYLTLKPASASRPSGQWSDDDYDVIADGVVVGRIFNAK
Ga0066903_1053034223	3300005764	Tropical Forest Soil	MDKDYLTLKRASASRPSGEWSDDDYDVLADGVVVGRIF
Ga0066903_1053893652	3300005764	Tropical Forest Soil	VDQLVLKRAAASRLSGEWSEDDYDVLAGGIVVGRIMKSAAAPVG*
Ga0066903_1055078821	3300005764	Tropical Forest Soil	MDTDYLALKRASASRLSGEWSDDDYDVLCEGAVVGRIMKTAAAPVG
Ga0066903_1057058372	3300005764	Tropical Forest Soil	MGQLILKGANASRSSGEWSDDDYDVLAEGIVVGRIMKAAAARVGT
Ga0066903_1069450352	3300005764	Tropical Forest Soil	MDKDYLLLTRASASRPSGDWNDDDFDVRVNGEVVGRIMKVHAA
Ga0066903_1071299061	3300005764	Tropical Forest Soil	VTHLIIKRASASRLSGDDDFDVLAAGAVVSRIFKVHAAPVGT
Ga0066903_1077717283	3300005764	Tropical Forest Soil	MDKDYLTLKRASASRPSGEWSDDDYDVLADGEVVGR
Ga0074047_115802972	3300006576	Soil	MTQLVLKRASASRSSGQWSDGDYDVLVDGEKVGRIMKAAAKPAD
Ga0066653_101302123	3300006791	Soil	MTGLTLKCASASRPSGEWNDDDYDVLAEGAVVRIFKANAAVGSPWM*
Ga0066665_110938361	3300006796	Soil	LDKDYLTLKRASASRPSGDWNDDDFDVLADGVVVGRIMKA
Ga0075424_1019927401	3300006904	Populus Rhizosphere	VTSQSLILKRASASRPSGEWSDDDFDVTADGVVVGRIMKAMAT
Ga0066710_1031622173	3300009012	Grasslands Soil	LILKRGSASRPSGEWNDDDYDVLADGVVVGRIMKAAASPV
Ga0066709_1007298283	3300009137	Grasslands Soil	MTLILKPASASRPSGEWNDDDYDVLADGVVVGRIFKVHA
Ga0075423_127937491	3300009162	Populus Rhizosphere	MDKDYLTLKRASASRPSGWDNDDYDVLADGVVVGRIMETA
Ga0126374_100471782	3300009792	Tropical Forest Soil	MDKDYLVLKRASTSRSSGEWNDDDYDVLADGAVNGRP*
Ga0126374_103948911	3300009792	Tropical Forest Soil	MDKDYLILKRASASRSSGEWSEGDYDVMCEGAVVGRIMKAAAAP
Ga0126384_109990492	3300010046	Tropical Forest Soil	MDKDYLVLKRASTSRSSGEWSDDDYDVLADGDVVGRIFKVHAAPVG
Ga0126384_111761711	3300010046	Tropical Forest Soil	VDQLILKRASATRLPGKWSEDDYDVLCEGAVVGRIMKAAAPLSSVEE*
Ga0126382_118858892	3300010047	Tropical Forest Soil	MGQLVLKRASASRPSGEWSDDDYDVLCEGAVVGRIMKAARRRGIREI*
Ga0126370_106111161	3300010358	Tropical Forest Soil	MGQLILKRATDSRLSDEWSEDDYDVLCEGAVVGRIMKAAAAP
Ga0126376_124080263	3300010359	Tropical Forest Soil	VDQLVLKHAAASRLSGEWSDDDYDVLCEGAVVGRIMK
Ga0126376_124544381	3300010359	Tropical Forest Soil	MDKGYLVLKRASASRPSGQWNDDDYDVVANGTVVGRIL
Ga0126372_105287401	3300010360	Tropical Forest Soil	MDKDYLVLKRASTSRSAGEWNDDDFDVLADGDVVGRIFKVHAA
Ga0126378_114110071	3300010361	Tropical Forest Soil	MDKDYLVLKRASASRLSGEWSDDDFDVLAEGILVGRIMKAAAAPLGTPW
Ga0126379_102272071	3300010366	Tropical Forest Soil	MGQLILKRATDSRLSGEWSEDDYDVLCEGAVVGRIMKAAAA
Ga0126379_125266792	3300010366	Tropical Forest Soil	MTTLLLKRASASRPSGEWHDADYDVLAEGVVVGRIMKA
Ga0126381_1021599052	3300010376	Tropical Forest Soil	MDQLILKRTWRSSGKWADDDYDVLADGVVVGRIFKGRRRL
Ga0126381_1041405773	3300010376	Tropical Forest Soil	MGQLILKRATDSRLSGEWSEDDYDVLCEGAVVGRIMKAAAAPVG
Ga0126383_105023963	3300010398	Tropical Forest Soil	MGQLILKRATDSRLSDEWSEDDYDVLCEGAVVGRIMKA
Ga0126383_111528711	3300010398	Tropical Forest Soil	MGQLVLKRASASRLSGEWSDDDYDVLCDGAVVGRMRNAAAAPVRTPTH
Ga0126383_113621761	3300010398	Tropical Forest Soil	MLKRASASRPSGEWNEDDFDVHADGAVVGRIMKVHAAP
Ga0126383_114130692	3300010398	Tropical Forest Soil	MDKDYLVLKRASTSRSSGKWNDDDYDVLADGVVNGRP*
Ga0126383_127367362	3300010398	Tropical Forest Soil	MDKDYLVLKRASTSRSSGEWGDDDYDVVADGAVVGRILKAAAAPVG*
Ga0126383_133046703	3300010398	Tropical Forest Soil	MDKDYLVLKRASTSRSSGEWNDDDYDVLADGAVVG
Ga0137362_111476851	3300012205	Vadose Zone Soil	MLMLKRASASRPSREWKDDDYDVLADGIVVGRIMKVTRY
Ga0137379_106158771	3300012209	Vadose Zone Soil	VASILILKRALASRPSGQWNDDDFDVLAAGAVVGRIMKVHAA
Ga0137377_104230361	3300012211	Vadose Zone Soil	MDQLILKRANASRPSGHWSDDDYDVLCEGEVVGRIIKTAAAPS*
Ga0137366_106257431	3300012354	Vadose Zone Soil	MGQLVLKRASASRPSGHWYEDDYDVLCEGEVVGRIMKAAAAPVGQPWL
Ga0137368_102913482	3300012358	Vadose Zone Soil	MGKLVLKRASASRLSGEWSDDDYDVLCEDEVVGRIMKAAAAPVGQPWLWTR*
Ga0137368_105713112	3300012358	Vadose Zone Soil	MAVLILKHASASRISGEWNDDDYDVLADGAVVGRIM
Ga0137361_112696662	3300012362	Vadose Zone Soil	MAQLMLKRASSSRPSGEWSDDDYDVLADGIVVGRIM*
Ga0126375_106985321	3300012948	Tropical Forest Soil	LDKDYLTLKPASASRRSGDWNDDDFDVLADGVVVGRIMK
Ga0164302_105274911	3300012961	Soil	LDKDYLTLKRASASRLSGDWNDDDFDVLADGVVVGRIMK
Ga0126369_111696091	3300012971	Tropical Forest Soil	MIQLILKRAPTSRPSGAWNEDDYDVLADGVVVGRIFKAAASP
Ga0126369_112458372	3300012971	Tropical Forest Soil	MDKDYLVLKRASASRSSGVWKDDDFDVLADGVVVGRIM
Ga0164304_102569612	3300012986	Soil	MEKDYLTLKRASTSRPSGEWNDDDFEVLAEGVVVGRTPAIAPRSKK*
Ga0182036_109854942	3300016270	Soil	MSQLVLKRGAASRLSGEWNDDDYDVLCEGAVVVRIM
Ga0182041_101898663	3300016294	Soil	MLIFKRASASRSSGKWNDDDFDVLADGVVVGRIMN
Ga0182033_100636082	3300016319	Soil	MDKDYLILKRAPASRPSGEWNDDDYDVLADGAVNGRP
Ga0182033_109651921	3300016319	Soil	MDKDYLVLKRASTSRSSGEWNDDDYDVLADGAVVGRILKV
Ga0182033_110680761	3300016319	Soil	MDKDYLVLKRASASRLSGEWNDDDFDVLCGGVVVGRIMQ
Ga0182035_102357333	3300016341	Soil	MSSLVLKRAWASRSSGEWNDGDFDVLADGTIVGRIMKAA
Ga0182032_103348272	3300016357	Soil	MDKDYLVLKRASTSRSSGEWSDDDYDVLAGGVVVGRILK
Ga0182032_104859522	3300016357	Soil	MDKDYLVLKRASTSRSSGEWNDDDYDVLADGAVNGRP
Ga0182032_105317443	3300016357	Soil	LDKDYLTLKRASASRPSDDWNDDDFDVLADGVVVGRITKA
Ga0182040_116977961	3300016387	Soil	MDKDYLTLKRTSASRPSGEWGDDDYDVLAEGIVVGRIM
Ga0182037_103282011	3300016404	Soil	MDKDYLVLKRASASRSSGEWSDDDYDVLAGGVVVGRILKSAAAP
Ga0182037_107620143	3300016404	Soil	MSSLVLKRASASRSSGEWNDGDFDVLADGTIVGRIMKAA
Ga0182037_110085643	3300016404	Soil	LDKDYLTLRRASASRPSGDWNDDDFDVLADGVVVGRIT
Ga0182037_112769972	3300016404	Soil	MDKDYLVLKRASTSRSSGEWSDDDYDVLADGDVVGRIFKV
Ga0182038_104497131	3300016445	Soil	MDQLIPKRASASRLSGEWSDDDYDVLAEGIVVGRI
Ga0182038_107751293	3300016445	Soil	VSSLVVKRAWASRSAGEWNDDDFDVLADGVVVGRIMKAAAVPVGMS
Ga0066662_115353872	3300018468	Grasslands Soil	MTQLILKRASASRPSGHWYDDDYDVLCEGEVVGRIIKTAAAPS
Ga0213877_102324541	3300021372	Bulk Soil	MGRPLDKDYLILKRVSASPSSGEWNDDDYDVLADGAVVGRIVKVH
Ga0210384_104761332	3300021432	Soil	VTTLVLKRASASRSAGEWKDDDYDSLADGVVVGRIFNSAASP
Ga0213879_101918852	3300021439	Bulk Soil	MEKDYLVLKRASASRPPGEWNDDDYDVLAEGVVIGSIRKR
Ga0126371_114833732	3300021560	Tropical Forest Soil	MDKDYLVLKRASTSRSSGEWNDDDYDVLANGAVVGRILKVHAAPVG
Ga0126371_118389563	3300021560	Tropical Forest Soil	MDKDYLVLKRASTSRSSGEWNDDDYDVLADGAVVGRILKVH
Ga0126371_129062482	3300021560	Tropical Forest Soil	MGQLVLKRASASRLSGEWNDDDYDVLCEDAVVGRIMKAAAAPLASVEA
Ga0207646_104639081	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VTSLLLKRASASRSSGEWSESDYDVLADGVVIGGKR
Ga0209648_104799583	3300026551	Grasslands Soil	MTQLVLKRASASPSGEWGEDDYDVLADGVVVGRIFHAAASPE
Ga0209648_108383901	3300026551	Grasslands Soil	LILKRASASRLSGEWKDDDYDVIADGAVVGRIMKGAAAP
Ga0307317_102561111	3300028720	Soil	VARLILKRANASRPSGGWSDDDYDVLADGVVVGRIM
Ga0307282_100025701	3300028784	Soil	MTQLVLKRASASRSSGQWSDDDYDVLVDGEKVGRI
Ga0307278_103466561	3300028878	Soil	MLKRASASRSSGEWNDDDFDVHADGAVVGRIMKVHAAPEGS
Ga0307308_103945321	3300028884	Soil	MTQLVLKRASASRSSGEWSDDDYDVLADGVVVGRIMKAAAKPADAS
Ga0307498_104358371	3300031170	Soil	MTQLVLKRASLSRSSGEWSDDDYDVLAEGVVVGRIMKAAA
Ga0318516_101326502	3300031543	Soil	MDKDYLILKRASTSRSSGEWSDDDYDVLADGLVVGRAAAL
Ga0318534_103230841	3300031544	Soil	MDQLILKHASASRSSGEWSEDDNDVLCEDAVVGRIM
Ga0318541_102929541	3300031545	Soil	MKKDYLALKRASASRLSGEWSDDDYDVLAEGIVVG
Ga0318571_103465272	3300031549	Soil	MSSLILKRASTSRPSGEWSDDDYDVLANSVVVGRIMK
Ga0318515_101908211	3300031572	Soil	MDKDYLVLKRASASRSSGEWSDDDYDVLADGDVVGRIFKV
Ga0318515_101944321	3300031572	Soil	MDALILKRASASRLSGEWSEDDYDVLCEGAVVGRIMKAAAAP
Ga0310915_106553331	3300031573	Soil	MSSLVLKRGSTSRSRGEWNDDDFDVLADGVVVGRIMKAAAVPVGI
Ga0310915_108393413	3300031573	Soil	MTQLVLKRASASRPSGEWGEDDYDVLADGAVVGRIMRAAAAP
Ga0318555_103271821	3300031640	Soil	MSSLVLKRAWASRSSGEWNDGDFDVLADGTIVGRIMKAAAV
Ga0318542_100777125	3300031668	Soil	MDKDYLVLKRASASRPSGEWNDDDFDVLTDGAVVGR
Ga0318542_105649681	3300031668	Soil	MEKDYLILKRASASRPSGEWNEDDYDVLAEGVVVGRIMKVH
Ga0318542_106510571	3300031668	Soil	MDKDYLVLKRASASRLSGEWSDDDYDVLADGVVVGRIMKAAVAPVGTPWL
Ga0318542_106907111	3300031668	Soil	MDKDYLTLKRASASRSSGEWNDDDYDVLADGAVAGRILKVARR
Ga0318572_100694041	3300031681	Soil	MDQLILKHASASRSSGEWSEDDNDVLCEDAVVDRIMKATAA
Ga0318572_101859211	3300031681	Soil	MTSSGQRLLKRASASRPSGEWNDDDFDVLADGLVIGRI
Ga0318560_106266962	3300031682	Soil	MDKDYLVLKRASASRSSGEWSDDDYDVLAEGDVVGRIFK
Ga0318560_107546472	3300031682	Soil	MGQLILKSANASRPSGEWSDDDYDVLAEGIVVGRIMKAA
Ga0318496_101419911	3300031713	Soil	MSSLVLKRAWASRSSGEWNDGDFDVLADGTIVGRIMKAAAVPVGMSW
Ga0306917_103523871	3300031719	Soil	VDQLILKRASASRLSGEWNDDDYDVLADGAVVGRIMKAAAAPVA
Ga0306917_111803332	3300031719	Soil	MDKDYLVLKRASTRESGKWNDDDYDVLADGAVNGRP
Ga0318493_108888532	3300031723	Soil	VPARALKRASASRPSGEWNDDDYDVLADGVVVGRMA
Ga0318500_100370025	3300031724	Soil	MSSLVLKRASASRQFGEWNDDDYDVLADATVVGRIM
Ga0318501_100297291	3300031736	Soil	MSSLVLKRASASRQFGEWNDDDYDVLADATVVGRIHGVP
Ga0318502_106335842	3300031747	Soil	MIIGASLILKQASASRSSGEWSEDDYEVLCEGAVVG
Ga0318492_103768291	3300031748	Soil	MSSLVLKRASASRSSGEWNDGDFDVLADGTIVGRIMKAAAVPV
Ga0318537_103809741	3300031763	Soil	MDKDYLVLKRASASRLSGEWSDDDYDVLAEGIVVGRIMK
Ga0318509_102712571	3300031768	Soil	MALILKRASASRTSGEWNDDDYDVLADGVVVGRVMKAAAAP
Ga0318521_106141972	3300031770	Soil	MDKDYLVLNRASTSRSSGEWNDDDFDVLADGDVVG
Ga0318521_108010751	3300031770	Soil	MTLVLKRASASRPSGEWNDDDYDVLAEGIVVGRIMNAAA
Ga0318521_110038131	3300031770	Soil	MDKARLILKRASASGPSDEWNDDDYDVLADGAVVGRRLANPN
Ga0318546_105729431	3300031771	Soil	KDYLVLQRASASRLSGEWSDDDYDVLADGIVVGRIMKAAPRQ
Ga0318508_10149181	3300031780	Soil	LTTWNQLVLKRAAASRSSGEWSDDDYDVLAGGIVVGRIMKA
Ga0318552_100672841	3300031782	Soil	LTTWNQLVLKRAAASRSSGEWSDDDYDVLAGGIVVGRIMKAAADH
Ga0318548_102474962	3300031793	Soil	MDKDYLALKRASASRPSGEWSDDDYDVLAEGKAVGRIFKSAASPV
Ga0318548_102500272	3300031793	Soil	MDYLVLKRASASRPSGEWNEDDYDVLADGVVVGRIFK
Ga0318576_102222842	3300031796	Soil	KDYLVLKRASASRLSGEWSDDDYDVLADGIVVGRIMKAAPRQ
Ga0318567_102366792	3300031821	Soil	MGQLILNSANASRSSGEWSDDDYDVLADSAVVGRIMKAAAAPVGQP
Ga0310917_102779283	3300031833	Soil	MDKDYLTLKRASASRSSGEWSDNDYDVLADGKAVGRIMK
Ga0310917_105032914	3300031833	Soil	MTGLILKRASASRLSGEWNDEDVLCESEVVGRIMKAAAAPV
Ga0318512_101559221	3300031846	Soil	MDKDYLALKRASASRPSGEWSDDDYDVLAEGKAVGRIFKSAA
Ga0306919_105099041	3300031879	Soil	MDKDYLTLKRASASRPSGEWSDDDYDVLCEGAVVGR
Ga0306925_114300492	3300031890	Soil	MDKDYLVLKRASTSRSSGEWSDDDYDVLAGGVVVGRILKSAAAPVGM
Ga0318520_103111671	3300031897	Soil	VTQQLILKRASASRPSGEWNDDDYDVLADGVVVGRIMKAAD
Ga0306923_100314347	3300031910	Soil	VDKDYLTLKRASASRLSGEWGDDDYDVLADGKVVGRIMKVHA
Ga0306923_118456051	3300031910	Soil	MLKCASASRPSGEWNDDDYDVPADGIIVGRIMKAAAVPVGQSWLW
Ga0306921_101057291	3300031912	Soil	MDKDYLVLKRASTSRSSGEWNDDDYDVLADGAVVGRI
Ga0310912_103159374	3300031941	Soil	LLLKCAATSRPSGKWNDDDYDVLADGVIVGRIMKAAAG
Ga0310912_107787152	3300031941	Soil	MSSLVLKRASASRPFGEWNDDDYDVLADASVVDRIMK
Ga0310912_110481993	3300031941	Soil	MGQLILKSANASRSSGEWSDDDYDVLAEGIVVGRIM
Ga0310913_102626972	3300031945	Soil	MDKDYLVLKRASTSRSSGEWSDDDYDVLADGDVVGRI
Ga0310913_105545741	3300031945	Soil	MSSLVLKRASASRSSGEWTDDDFDVLADGVVVGRIMKA
Ga0310910_100802474	3300031946	Soil	MSSLVLKRASASRSSGEWNDGDFDVLADGTIVGRIMKAAAVP
Ga0306926_102367551	3300031954	Soil	MDKDYLTLKRASASRPSGEWGDDDYDVLAEGIVVGRIMQ
Ga0318530_101911753	3300031959	Soil	MGQLILKSANASRPSGEWSDDDYDVLAEGIVVGRIMKAAADNYAFG
Ga0306922_101539471	3300032001	Soil	MDQLILKRASASRLSGEWNDDDYDVLADGAVVGRIMKA
Ga0318556_100791945	3300032043	Soil	LTTWNQLVLKRAAASRSSGEWSDDDYDVLAGGIVVGRIMKAAAAPVGQPWL
Ga0318556_103342792	3300032043	Soil	MDKDYLALKRASASRPSGEWSDDDYDVLAEGKAVGRIFKSA
Ga0318558_102033551	3300032044	Soil	MDKDYLVLKRASTSRSSGEWSDDDYDVLAGGVVIGRI
Ga0318532_100796051	3300032051	Soil	MDKDYLVLKRASASRPSGERNDDDYDVLADGVVVGRIFK
Ga0318533_101594634	3300032059	Soil	MALILKRASASRTSGEWNDDDYDVLADGVVVGRIMKAAA
Ga0318533_113374201	3300032059	Soil	MDKDYLVLKRASTSRSSGEWNDDDFDVLADGAVVGRIM
Ga0318504_101892992	3300032063	Soil	MDKDYLVLKRASTSRSSGEWSDDDYDVLADGDVVGRIFK
Ga0318510_100429644	3300032064	Soil	LDKDYLTLKRASASRPSDDWNDDDFDVLADGVVVGRITK
Ga0306924_104369211	3300032076	Soil	MDKDYLVLKRASASRSSGEWSDDDYDVLAGGVVVGRILKSAAAPVGMP
Ga0306924_119589161	3300032076	Soil	MAPMAQLILKHASTSRSSGEWDDDDYDVLADGVVVGRIMKAAAVPV
Ga0318540_102977191	3300032094	Soil	MDQLILKHASASRSSGEWSEDDNDVLCEDAVVDRIM
Ga0318540_106552571	3300032094	Soil	LDKDYLTLKRASASRPSDDWNDDDFDVLANGVVVGRITKAAAVPV
Ga0306920_1006320534	3300032261	Soil	MDKDYLVLKRASTSRSSGKWNDDDYDVLADGAVNGRP
Ga0306920_1006657374	3300032261	Soil	MSSLVLKRASASRPSGEWNDDDYDVLADATVVGRIMKV
Ga0306920_1020737521	3300032261	Soil	MSLLVLKRASASRLSGEWNDDDYDVLADGTVVDRIMKTAAASV
Ga0306920_1037988482	3300032261	Soil	VTSLLLKRASASRPSGDWNDDDYDVLADGAVVGRI
Ga0306920_1038315001	3300032261	Soil	MLKRASASRPSGEWSDDDYDVLCEGAAAGRIFKSAARPWA
Ga0310914_113009361	3300033289	Soil	MGQLILNSANASRSSGEWSDDDYDVLADSAVVGRIMKAAAAPVGQPWLWT
Ga0318519_106708602	3300033290	Soil	LDKDYLTLKRASASRPSGDWNDDDFHVLADGVVVGEHVEI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F033785

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences