Metagenome / Metatranscriptome Family F033938

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F033938
Family Type	Metagenome / Metatranscriptome
Number of Sequences	176
Average Sequence Length	68 residues
Representative Sequence	MRAAANEYRAKAFECLSLAECMADPERRAEILRYARLWMQLTEPVGTSRSAYEVEPAIAPLSVVAQH
Number of Associated Samples	103
Number of Associated Scaffolds	176

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	87.43 %
% of genes near scaffold ends (potentially truncated)	36.93 %
% of genes from short scaffolds (< 2000 bps)	88.64 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.54

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (62.500 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil (26.136 % of family members)
Environment Ontology (ENVO)	Unclassified (39.205 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (64.205 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 42.11% β-sheet: 0.00% Coil/Unstructured: 57.89%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.54
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.54
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 176 Family Scaffolds
PF04542	Sigma70_r2	2.84
PF00004	AAA	2.27
PF03401	TctC	1.14
PF13505	OMP_b-brl	1.14
PF04545	Sigma70_r4	1.14
PF00501	AMP-binding	0.57
PF04392	ABC_sub_bind	0.57
PF16576	HlyD_D23	0.57
PF04226	Transgly_assoc	0.57
PF08450	SGL	0.57
PF06689	zf-C4_ClpX	0.57
PF13683	rve_3	0.57
PF01548	DEDD_Tnp_IS110	0.57
PF08734	GYD	0.57
PF02617	ClpS	0.57
PF13188	PAS_8	0.57
PF00216	Bac_DNA_binding	0.57
PF00126	HTH_1	0.57
PF13185	GAF_2	0.57

COG ID	Name	Functional Category	% Frequency in 176 Family Scaffolds
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	2.84
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	2.84
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	2.84
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	2.84
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	1.14
COG0776	Bacterial nucleoid DNA-binding protein IHF-alpha	Replication, recombination and repair [L]	0.57
COG2127	ATP-dependent Clp protease adapter protein ClpS	Posttranslational modification, protein turnover, chaperones [O]	0.57
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	0.57
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.57
COG3386	Sugar lactone lactonase YvrE	Carbohydrate transport and metabolism [G]	0.57
COG3391	DNA-binding beta-propeller fold protein YncE	General function prediction only [R]	0.57
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.57
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	0.57

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
All Organisms	root	All Organisms	37.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
cellular organisms	root	All Organisms → cellular organisms	37.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	37.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	30.11 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.57 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	21.59 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.84 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.57 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	8.52 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5.11 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.84 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.57 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	7.95 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	2.84 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.27 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.57 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.57 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.57 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	7.95 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	2.84 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.27 %
Conexibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae	0.57 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	0.57 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.57 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	7.95 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	2.84 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	0.57 %
Bradyrhizobium diazoefficiens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	0.57 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.57 %
Conexibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	0.57 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	0.57 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.57 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	7.95 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	2.84 %
Conexibacter woesei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	0.57 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	0.57 %
Bradyrhizobium diazoefficiens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	0.57 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.57 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	0.57 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.57 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.57 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_16662633	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1833	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c0536156	Not Available	691	Open in IMG/M
3300000363\|ICChiseqgaiiFebDRAFT_10911737	Not Available	588	Open in IMG/M
3300000955\|JGI1027J12803_102934752	Not Available	667	Open in IMG/M
3300003911\|JGI25405J52794_10086263	All Organisms → cellular organisms → Bacteria → Proteobacteria	693	Open in IMG/M
3300004633\|Ga0066395_10138348	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1221	Open in IMG/M
3300004633\|Ga0066395_10495109	Not Available	703	Open in IMG/M
3300005167\|Ga0066672_10948170	Not Available	529	Open in IMG/M
3300005332\|Ga0066388_100857913	Not Available	1492	Open in IMG/M
3300005332\|Ga0066388_101006962	Not Available	1396	Open in IMG/M
3300005332\|Ga0066388_101793934	Not Available	1090	Open in IMG/M
3300005332\|Ga0066388_102169929	Not Available	1001	Open in IMG/M
3300005332\|Ga0066388_102325785	Not Available	970	Open in IMG/M
3300005332\|Ga0066388_102628139	Not Available	917	Open in IMG/M
3300005332\|Ga0066388_103511445	Not Available	800	Open in IMG/M
3300005332\|Ga0066388_103538108	Not Available	797	Open in IMG/M
3300005332\|Ga0066388_104468114	Not Available	712	Open in IMG/M
3300005332\|Ga0066388_105864545	Not Available	621	Open in IMG/M
3300005332\|Ga0066388_106004099	Not Available	613	Open in IMG/M
3300005332\|Ga0066388_107316621	Not Available	554	Open in IMG/M
3300005332\|Ga0066388_107470359	Not Available	548	Open in IMG/M
3300005332\|Ga0066388_107979015	All Organisms → cellular organisms → Bacteria → Proteobacteria	529	Open in IMG/M
3300005332\|Ga0066388_108607589	All Organisms → cellular organisms → Bacteria → Proteobacteria	507	Open in IMG/M
3300005363\|Ga0008090_10388819	Not Available	602	Open in IMG/M
3300005562\|Ga0058697_10797859	Not Available	510	Open in IMG/M
3300005713\|Ga0066905_100023956	All Organisms → cellular organisms → Bacteria → Proteobacteria	3320	Open in IMG/M
3300005713\|Ga0066905_100185255	All Organisms → cellular organisms → Bacteria → Proteobacteria	1540	Open in IMG/M
3300005713\|Ga0066905_100231982	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1404	Open in IMG/M
3300005713\|Ga0066905_100531856	Not Available	983	Open in IMG/M
3300005713\|Ga0066905_100660469	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	892	Open in IMG/M
3300005713\|Ga0066905_102206309	Not Available	513	Open in IMG/M
3300005764\|Ga0066903_100043497	All Organisms → cellular organisms → Bacteria → Proteobacteria	5343	Open in IMG/M
3300005764\|Ga0066903_100322154	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2469	Open in IMG/M
3300005764\|Ga0066903_100396094	All Organisms → cellular organisms → Bacteria	2268	Open in IMG/M
3300005764\|Ga0066903_100471670	Not Available	2110	Open in IMG/M
3300005764\|Ga0066903_100635658	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1861	Open in IMG/M
3300005764\|Ga0066903_100759271	All Organisms → cellular organisms → Bacteria	1724	Open in IMG/M
3300005764\|Ga0066903_101259270	All Organisms → cellular organisms → Bacteria	1378	Open in IMG/M
3300005764\|Ga0066903_101328329	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	1345	Open in IMG/M
3300005764\|Ga0066903_101553996	Not Available	1252	Open in IMG/M
3300005764\|Ga0066903_101611826	Not Available	1231	Open in IMG/M
3300005764\|Ga0066903_101655709	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1216	Open in IMG/M
3300005764\|Ga0066903_102064803	All Organisms → cellular organisms → Bacteria	1096	Open in IMG/M
3300005764\|Ga0066903_102100469	All Organisms → cellular organisms → Bacteria	1087	Open in IMG/M
3300005764\|Ga0066903_103657465	Not Available	827	Open in IMG/M
3300005764\|Ga0066903_105563366	Not Available	664	Open in IMG/M
3300005764\|Ga0066903_106016003	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300005764\|Ga0066903_106393517	Not Available	615	Open in IMG/M
3300005764\|Ga0066903_106857867	Not Available	591	Open in IMG/M
3300005764\|Ga0066903_107577421	Not Available	560	Open in IMG/M
3300005983\|Ga0081540_1040147	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	2443	Open in IMG/M
3300006032\|Ga0066696_10839007	Not Available	586	Open in IMG/M
3300006034\|Ga0066656_11052662	Not Available	523	Open in IMG/M
3300006172\|Ga0075018_10340126	Not Available	750	Open in IMG/M
3300006175\|Ga0070712_100967799	Not Available	736	Open in IMG/M
3300006852\|Ga0075433_10847576	Not Available	798	Open in IMG/M
3300006854\|Ga0075425_100635037	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1228	Open in IMG/M
3300006871\|Ga0075434_101766870	Not Available	626	Open in IMG/M
3300007076\|Ga0075435_100732091	Not Available	860	Open in IMG/M
3300007076\|Ga0075435_102007240	Not Available	508	Open in IMG/M
3300009012\|Ga0066710_101877106	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	899	Open in IMG/M
3300009792\|Ga0126374_10240662	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1174	Open in IMG/M
3300010043\|Ga0126380_10151101	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1488	Open in IMG/M
3300010043\|Ga0126380_12307010	Not Available	500	Open in IMG/M
3300010046\|Ga0126384_10074282	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2426	Open in IMG/M
3300010046\|Ga0126384_11764320	Not Available	587	Open in IMG/M
3300010047\|Ga0126382_11605107	Not Available	603	Open in IMG/M
3300010147\|Ga0126319_1231781	Not Available	662	Open in IMG/M
3300010154\|Ga0127503_10625255	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	878	Open in IMG/M
3300010358\|Ga0126370_10302919	Not Available	1268	Open in IMG/M
3300010358\|Ga0126370_11124489	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	725	Open in IMG/M
3300010359\|Ga0126376_11546341	Not Available	694	Open in IMG/M
3300010361\|Ga0126378_12476844	Not Available	593	Open in IMG/M
3300010362\|Ga0126377_12140176	Not Available	636	Open in IMG/M
3300010362\|Ga0126377_12569614	Not Available	585	Open in IMG/M
3300010366\|Ga0126379_11471562	Not Available	787	Open in IMG/M
3300010376\|Ga0126381_100992296	Not Available	1211	Open in IMG/M
3300010398\|Ga0126383_10581087	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1189	Open in IMG/M
3300010398\|Ga0126383_11512685	Not Available	761	Open in IMG/M
3300010868\|Ga0124844_1232349	Not Available	658	Open in IMG/M
3300012198\|Ga0137364_10234085	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1354	Open in IMG/M
3300012201\|Ga0137365_10281359	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1234	Open in IMG/M
3300012202\|Ga0137363_10625848	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	909	Open in IMG/M
3300012204\|Ga0137374_10266107	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1427	Open in IMG/M
3300012205\|Ga0137362_11613269	Not Available	536	Open in IMG/M
3300012208\|Ga0137376_10856043	Not Available	781	Open in IMG/M
3300012210\|Ga0137378_11282062	Not Available	649	Open in IMG/M
3300012285\|Ga0137370_10720696	Not Available	619	Open in IMG/M
3300012350\|Ga0137372_10007517	All Organisms → cellular organisms → Bacteria → Proteobacteria	10544	Open in IMG/M
3300012350\|Ga0137372_10453531	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	961	Open in IMG/M
3300012350\|Ga0137372_10747926	Not Available	704	Open in IMG/M
3300012354\|Ga0137366_10125681	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1936	Open in IMG/M
3300012917\|Ga0137395_10851465	Not Available	660	Open in IMG/M
3300012923\|Ga0137359_10452234	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1136	Open in IMG/M
3300012948\|Ga0126375_10648350	Not Available	814	Open in IMG/M
3300012951\|Ga0164300_10152277	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1084	Open in IMG/M
3300012961\|Ga0164302_10219065	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1186	Open in IMG/M
3300012971\|Ga0126369_10831959	Not Available	1007	Open in IMG/M
3300012971\|Ga0126369_13714176	Not Available	500	Open in IMG/M
3300012986\|Ga0164304_11138330	Not Available	627	Open in IMG/M
3300015371\|Ga0132258_12661679	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1249	Open in IMG/M
3300015372\|Ga0132256_100470781	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1365	Open in IMG/M
3300016319\|Ga0182033_10249237	Not Available	1442	Open in IMG/M
3300016371\|Ga0182034_11847692	Not Available	533	Open in IMG/M
3300016387\|Ga0182040_10235541	Not Available	1367	Open in IMG/M
3300016404\|Ga0182037_11943253	Not Available	527	Open in IMG/M
3300016422\|Ga0182039_10985608	Not Available	755	Open in IMG/M
3300016445\|Ga0182038_11173556	Not Available	684	Open in IMG/M
3300026494\|Ga0257159_1050651	Not Available	706	Open in IMG/M
3300027527\|Ga0209684_1032814	Not Available	794	Open in IMG/M
3300027874\|Ga0209465_10247247	Not Available	892	Open in IMG/M
3300031545\|Ga0318541_10044261	Not Available	2264	Open in IMG/M
3300031545\|Ga0318541_10120165	Not Available	1426	Open in IMG/M
3300031546\|Ga0318538_10329343	Not Available	824	Open in IMG/M
3300031546\|Ga0318538_10570361	Not Available	614	Open in IMG/M
3300031561\|Ga0318528_10116329	Not Available	1412	Open in IMG/M
3300031573\|Ga0310915_10367653	All Organisms → cellular organisms → Bacteria	1020	Open in IMG/M
3300031640\|Ga0318555_10557702	Not Available	621	Open in IMG/M
3300031668\|Ga0318542_10274906	Not Available	860	Open in IMG/M
3300031679\|Ga0318561_10369014	Not Available	788	Open in IMG/M
3300031679\|Ga0318561_10452491	Not Available	706	Open in IMG/M
3300031719\|Ga0306917_10765132	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	758	Open in IMG/M
3300031719\|Ga0306917_11568437	Not Available	506	Open in IMG/M
3300031724\|Ga0318500_10106582	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	1281	Open in IMG/M
3300031744\|Ga0306918_10000929	All Organisms → cellular organisms → Bacteria	14110	Open in IMG/M
3300031744\|Ga0306918_10098434	All Organisms → cellular organisms → Bacteria	2076	Open in IMG/M
3300031744\|Ga0306918_10528234	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	924	Open in IMG/M
3300031744\|Ga0306918_10801711	Not Available	735	Open in IMG/M
3300031747\|Ga0318502_10515669	Not Available	717	Open in IMG/M
3300031768\|Ga0318509_10341245	Not Available	838	Open in IMG/M
3300031771\|Ga0318546_10212807	Not Available	1323	Open in IMG/M
3300031771\|Ga0318546_10328278	Not Available	1062	Open in IMG/M
3300031771\|Ga0318546_10630191	Not Available	754	Open in IMG/M
3300031781\|Ga0318547_10188448	Not Available	1228	Open in IMG/M
3300031792\|Ga0318529_10290762	Not Available	761	Open in IMG/M
3300031795\|Ga0318557_10525809	Not Available	543	Open in IMG/M
3300031796\|Ga0318576_10131111	Not Available	1162	Open in IMG/M
3300031833\|Ga0310917_10227746	Not Available	1252	Open in IMG/M
3300031833\|Ga0310917_10754983	Not Available	658	Open in IMG/M
3300031879\|Ga0306919_10046548	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2845	Open in IMG/M
3300031879\|Ga0306919_11154688	Not Available	589	Open in IMG/M
3300031890\|Ga0306925_10093872	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3188	Open in IMG/M
3300031890\|Ga0306925_10155010	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2465	Open in IMG/M
3300031890\|Ga0306925_10770011	Not Available	1001	Open in IMG/M
3300031890\|Ga0306925_11456823	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	672	Open in IMG/M
3300031897\|Ga0318520_10825263	Not Available	582	Open in IMG/M
3300031910\|Ga0306923_10347259	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1692	Open in IMG/M
3300031912\|Ga0306921_10111803	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	3175	Open in IMG/M
3300031912\|Ga0306921_10175916	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2508	Open in IMG/M
3300031912\|Ga0306921_10180928	All Organisms → cellular organisms → Bacteria → Proteobacteria	2471	Open in IMG/M
3300031941\|Ga0310912_10080669	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2362	Open in IMG/M
3300031942\|Ga0310916_10159292	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1868	Open in IMG/M
3300031946\|Ga0310910_10333389	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1197	Open in IMG/M
3300031947\|Ga0310909_11016970	Not Available	676	Open in IMG/M
3300031954\|Ga0306926_10569193	All Organisms → cellular organisms → Bacteria → Proteobacteria	1386	Open in IMG/M
3300031954\|Ga0306926_11091650	Not Available	944	Open in IMG/M
3300031959\|Ga0318530_10086549	All Organisms → cellular organisms → Bacteria	1232	Open in IMG/M
3300031959\|Ga0318530_10338392	Not Available	623	Open in IMG/M
3300032001\|Ga0306922_10086903	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3291	Open in IMG/M
3300032001\|Ga0306922_10651133	Not Available	1112	Open in IMG/M
3300032001\|Ga0306922_11340098	Not Available	722	Open in IMG/M
3300032025\|Ga0318507_10553165	Not Available	501	Open in IMG/M
3300032039\|Ga0318559_10353087	Not Available	684	Open in IMG/M
3300032044\|Ga0318558_10626067	Not Available	538	Open in IMG/M
3300032054\|Ga0318570_10392745	Not Available	633	Open in IMG/M
3300032060\|Ga0318505_10421037	Not Available	631	Open in IMG/M
3300032063\|Ga0318504_10502310	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	581	Open in IMG/M
3300032094\|Ga0318540_10511620	Not Available	579	Open in IMG/M
3300032180\|Ga0307471_101458889	Not Available	843	Open in IMG/M
3300032261\|Ga0306920_100492756	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1819	Open in IMG/M
3300032261\|Ga0306920_100572627	All Organisms → cellular organisms → Bacteria → Proteobacteria	1672	Open in IMG/M
3300032261\|Ga0306920_100898026	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1295	Open in IMG/M
3300032261\|Ga0306920_100959392	All Organisms → cellular organisms → Bacteria	1247	Open in IMG/M
3300032261\|Ga0306920_101937301	Not Available	827	Open in IMG/M
3300032261\|Ga0306920_103321920	Not Available	599	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.32%
Host-Associated	Host-Associated	5.68%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.61%
Plants	Host-Associated → Plants	5.68%
Aquatic	Environmental → Aquatic	1.70%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	92.61%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.41%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.70%
Freshwater	Environmental → Aquatic → Freshwater	1.14%
Sediment	Environmental → Aquatic → Sediment	0.57%
Phylloplane	Host-Associated → Plants → Phylloplane	0.57%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	65.91%
Loam	Environmental → Terrestrial → Soil → Loam	26.70%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.84%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.14%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.14%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.57%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.57%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.57%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	0.57%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	40.34%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	26.14%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.45%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.84%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.14%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.14%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.57%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.57%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.57%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.57%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	0.57%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	26.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	21.02%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.75%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.80%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.98%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.70%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.14%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.14%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.57%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.57%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.57%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.57%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.57%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.57%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	0.57%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.57%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300003911	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010147	Soil microbial communities from California, USA to study soil gas exchange rates - BB-CA-RED metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300026494	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-A	Environmental	Open in IMG/M
3300027527	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_03771410	2088090014	Soil	MRAAANEYRAKAFEYLSLAECMNDPERRAETLRYAHWWTQLAEPVGTFRSAYGTFRSAYEGAPAADARD
ICChiseqgaiiDRAFT_05361561	3300000033	Soil	MXAAANEYRAKAFECLSLAECMTDPERRAEILRYARLWMQLTEPVGTSRSAYEVESAPLSVVAQHNTWHQNLRLGC*
ICChiseqgaiiFebDRAFT_109117371	3300000363	Soil	MRAAANEYRAKAFECLSLAECMTDPERRAEILRYARLWMQLTEPVGTFRSAYEGAPAADARD*
JGI1027J12803_1029347522	3300000955	Soil	MRAAANEYRAKAFEYLSLAECMNDPERRAETLRYAHWWTQLAEPVGTFRSAYGTFRSAYEGAPAADARD*
JGI25405J52794_100862631	3300003911	Tabebuia Heterophylla Rhizosphere	MRAAANKYRAKAFECLSLAECMPDPERRAEILRYARLWMQLTEPVGTSRSAYEVEPAIAPLSVVAQHNTWQQNLRHKG*
Ga0066395_101383482	3300004633	Tropical Forest Soil	MRAAANEYRAKAFERLSLAECVNDAERRAEFLRYARWWMQLAEPVGTPRSAYEVEPQHNRWQQILRHKG*
Ga0066395_104951091	3300004633	Tropical Forest Soil	MRAAANKYRAKAFECLSLAECMNDPERRAEILRYARWWTQLTEPVGTSRSAYEVEAAIAPLSVVAQHNTWQQILHHKG*
Ga0066672_109481701	3300005167	Soil	MRAAANKYRAKAFECLSLAECMADPERRAEILRYARLWMQLTEPVGTSRSAYEVGSAPLSVVAQHNTWHQNLRLGC*
Ga0066388_1008579133	3300005332	Tropical Forest Soil	MRAAANEYRAKAFERLSLAECANDAERRAEFLRYARWWMQLAEPPPSAYEVESRHNRWQQILSQ*
Ga0066388_1010069622	3300005332	Tropical Forest Soil	MRAAANEYRAKAFECLSRAECMNDPENRAEILRYARMWMQLAEPAEKFRGAYEVPKRG*
Ga0066388_1017939341	3300005332	Tropical Forest Soil	MRAAANGYRAKAFECLSLGECMTDPERRAEMLRYARLWMQLAEPVITSRSAYEVGPAIAPLSVVAQHNRWQQNLRHIG*
Ga0066388_1021699292	3300005332	Tropical Forest Soil	MRAAANEYRARAFEWLSLAECMTDPERRAEILRYARWWMQLTEPVGTSRSAYEVEPAIAPLSVVAQHNTWQQNLGH*
Ga0066388_1023257852	3300005332	Tropical Forest Soil	MRAAANEYRAKAFECLSLAESMNDPRRRAEILRYARWWTQLTEPVGPSCSAYEVEAAIASLSVVAKHNTWQQILHHKG*
Ga0066388_1023566042	3300005332	Tropical Forest Soil	MRAAANEYRAKAFECLSLAECMNDPERRAEILRYAQWWTQLTEPAGTFWSAYEVEPAIFFCEAISKRTENFG*
Ga0066388_1026281391	3300005332	Tropical Forest Soil	MRAAANEYRAKAFECLSLAECMADPERRAEILRYARLWMQLTEPVGTSRSAYEVEPAIAPLSVVAQHNT
Ga0066388_1035114451	3300005332	Tropical Forest Soil	MSAAANKYRAKAFECVSLAECMTDPERRAELLRYGRLWMQLAEPVGTSRWAYEVLPAQVARSSAQL
Ga0066388_1035381082	3300005332	Tropical Forest Soil	MRAAANEYRAKAFERLSLAECVNDPERRAEVLRYARWWMQLAEPVGTPRSAYEVESRHNRWQQILRHKG*
Ga0066388_1044681141	3300005332	Tropical Forest Soil	MRAAANEYRAKVFECLSLAECMNDPERRAEILRHAQWWTQLTEPAGTFRSAYEAEPANGSIFL*
Ga0066388_1058645452	3300005332	Tropical Forest Soil	MRVAADEYRAKAFECLSPAECMNDPERRADILRYARMWMQLAEPADRFRGAADRFRG
Ga0066388_1060040992	3300005332	Tropical Forest Soil	MRAAANEYRAKAFECLSLAECMNDPENRPEILRYARMWMQLAEPVEKFRSAYEVSNRG*
Ga0066388_1073166212	3300005332	Tropical Forest Soil	MSAAANKYRAKAFECLSLAECMPDPERRAEILRYARLWMQLTEPVGTYRSAYEVEPAVAPLSVVAQHNTWQQNLRHKG*
Ga0066388_1074703592	3300005332	Tropical Forest Soil	MRAAANEYRAKAFECLSLAESMNDPERRAEILRYARWWTQLTEPVGPSRSAYEVEAAIASLSVVAKHNTWQQILHHKG*
Ga0066388_1079790151	3300005332	Tropical Forest Soil	AANKYRAKAFECLSLAECMPDPERRAEILRYARLWMRLTEPVGTSRSAYEVEPAIAPLSVVAQHNTWQQNLRHKG*
Ga0066388_1086075892	3300005332	Tropical Forest Soil	MSAAANKYRAKAFECLSLAECMPDPERRAEILRYARLWMQMTEPVGTYRSAYEVEPAVAPLSVVAQHNTWQQNLRHKG*
Ga0008090_103888192	3300005363	Tropical Rainforest Soil	MRVAADEYRAKAFECLSLAECMNDPEKRADLLRYARMWMQLAEPVEKFRGAYEVRSDR*
Ga0058697_107978591	3300005562	Agave	MSAAANKYRAKAFECLSLAECMPDPERRAEILRYARLWMQLTEPVGTSRSAYEVEPAIAPLSVVAQHNTWQQNLRHKG*
Ga0066905_1000239563	3300005713	Tropical Forest Soil	MRAAANEYRAKAFERLSLAECVNDAERRAEFLRYARWWMQLAEPVGTPRSAYEVEPQHNRWQQILRHQG*
Ga0066905_1001852552	3300005713	Tropical Forest Soil	MRAAANEYRAKAFERLSLAECMTDPERRAEFLRYARWWMQLAEPVGTPRSAYEVEPQHNRWQQILRHKG*
Ga0066905_1002319823	3300005713	Tropical Forest Soil	MRAAANGYRAKAFECLSLAEGMNDPERRTEILRYGRLWMQLAEPVGTSRWAYEV
Ga0066905_1005318564	3300005713	Tropical Forest Soil	MSAAANKYRAKAFECVSLAECMTDPERRAELLRYGRLWMQLAEPVGTSRWAYEVLPAQVARSSAQLALGF*
Ga0066905_1006604691	3300005713	Tropical Forest Soil	MRAAANNYRAKAFECLSQAECMTDPERRAEILRYAQWWMQLGEPVGTFRSAYEVEPAIAPLSVVAQHNTWQQNLRLGWS*
Ga0066905_1022063091	3300005713	Tropical Forest Soil	MRAAVNEYRAKAFEWLSLAECMTDPERRAEILRYARWWMQLTEPVGTSRSAYEVEPAIAPLSVVTQHNAWQQNLRH*
Ga0066903_1000434971	3300005764	Tropical Forest Soil	MRAAVNAYRAKGFECLSLAECMNDPERRAELLQYARLWMQLTEPVGTFRSAYEVEP
Ga0066903_1003221543	3300005764	Tropical Forest Soil	MRAAANEYRAKAFECLSQAECMNDPERRAEFLRYARWWMQLAEPGAYRSAYEVEPSTSQRERAY*
Ga0066903_1003960945	3300005764	Tropical Forest Soil	MSAATNEYRAKAFAECMTDPERRAEILRYARWWMQLTEPLGPSRSAYEVEAAIAPLSVVAKHNTWQQILHHKG*
Ga0066903_1004716703	3300005764	Tropical Forest Soil	MRVAADEYRAKAFECLSLAECMNDPERRVDVLRYARMWMQLADPADRFRDAYEVRSGQ*
Ga0066903_1006356583	3300005764	Tropical Forest Soil	MRAAANAYRAKAFECLSLAECMNDPERRAELLQYARLWMQLTEPVRPYRSAYEVEPAIAPLSVVAQHW*
Ga0066903_1007592714	3300005764	Tropical Forest Soil	MSAAANKYRAKAFECVSLAECMTDPERRAELLRYGRLWMQLAEPVGTSRWAY*
Ga0066903_1012592701	3300005764	Tropical Forest Soil	MRATANEYRAKAFERLSLAECVNDPERRAEVLRYARWWMQLPEPVGTPRSAYEVESRHNRWQQILRHKG*
Ga0066903_1013283291	3300005764	Tropical Forest Soil	AKAFECLSLAECMTDPERRAEILRYAQWWMQLTEPVGTFRSAYEVGPAISPLSVVAQHNTWQQNLRLG*
Ga0066903_1015539962	3300005764	Tropical Forest Soil	MRAAANEYRAKAFERLSLAECMTDPERRAEFLRYARWWMQLAEPVGTPRSAYEVEPQHNKWQQIFITEAEYPVSALDGHDG*
Ga0066903_1016118262	3300005764	Tropical Forest Soil	MRAAANEYRAKAFECLSLAECMTDPERRAEILRYAQWWMQLTEPVGTFRSAYEVEPAIAPLSVVAQHNTWQQNLRLGWS*
Ga0066903_1016557092	3300005764	Tropical Forest Soil	MRAAANQYRAKAFECLSLAECMTDPERRAEILRYARLWMQLTEPVGTSRSAYEVEPAIAPLSVVAQHNTWQQNLRLGC*
Ga0066903_1020648031	3300005764	Tropical Forest Soil	MRAAANGYRAKAFECLSLAEGMNDPERRAEFLRYGRLWMQLAEPVGTSRWAYEV
Ga0066903_1021004694	3300005764	Tropical Forest Soil	MRAAANEYRAKAFECLSLAECMTDPERRAEILRYGRWWMQLAEPVGTSRWAYEVEPAIAPLSVVAQHNTWQQNLRLGWS*
Ga0066903_1036574651	3300005764	Tropical Forest Soil	KAFERLSLAECVNDAERRAEFLRYARWWMQLTEPVGTSRSAYEVEPAIAPENLVVQPRRNAIPKAQ*
Ga0066903_1055633662	3300005764	Tropical Forest Soil	MRAAANEYRAKAFECLSLAECMNDPENRPEILRYARMWMQLAEPVDKFRSAYEVSNRG*
Ga0066903_1060160032	3300005764	Tropical Forest Soil	MRAAANAYRAKAFECLSLAESTNDPERRADILRYARLWMQLAEPVGTSRSAYEVEPAISPLVVTQHNTWQQNLRHKG*
Ga0066903_1063935171	3300005764	Tropical Forest Soil	MRAAANEYRAKAFERLSLAECMTDPERRAEFLRYARWWMQLAEPVGNPRSAYEVESRHTRWQQILRHKG*
Ga0066903_1068578671	3300005764	Tropical Forest Soil	MRAAANEYRAKAFECLSLAECMIDPERRAEILRYARLWMQLAEPVGTSRSAYEVEPAIAPLSVVAQHNTWQQNLRLGWS*
Ga0066903_1075774212	3300005764	Tropical Forest Soil	MRAAANEYRAKAFECLSLAECMVDPERRAEILRYARLWMQLTEPVGTSRSAY
Ga0081540_10401472	3300005983	Tabebuia Heterophylla Rhizosphere	MRAAANEYRAKAFECLSLAECMTDPEGRAEILRYARWWMQLTEPVETPWSAYEAEPQHNKWQQILRHKG*
Ga0066696_108390071	3300006032	Soil	MLLRSPMRAAANKYRAKAFECLSLAECMPDPERRAEILRYARLWMQLTEPVGTSRSAYEVEPAIAPLSVVAQHNT
Ga0066656_110526621	3300006034	Soil	MLLRSPMRAAANKYRAKAFECLSLAECMADPERRAEILRYARLWMQLTEPVGTSRSAYEVGSAPLSVVAQHNTW
Ga0075018_103401262	3300006172	Watersheds	MRAAANEYRAKAFECLSLAEGMNDPECRAEILRYARLWMQLAEPVGTSRSAYEVEPAIASLSVVVQHNTWQQNLRHKG*
Ga0070712_1009677992	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MRAAANEYRAKAFECLSLAEGVNDPERRAEVLRYARWWMQLAEPVGTSRSAYEV*
Ga0075433_108475761	3300006852	Populus Rhizosphere	MRAAANEYRAKAFERLSLAEWMTDPERRAEFLRYARWWMQLAEPPRSAYEVESQHNRWQQILRYKG*
Ga0075425_1006350373	3300006854	Populus Rhizosphere	MRAAANEYRAKAFERLSLAECMTDPERRAEFLRYARWWMQLAEPVGTPRSAYEVESRHARWQQILRHKG*
Ga0075434_1017668701	3300006871	Populus Rhizosphere	MRAAANEYRARAFECLSLAECMTDPERRAEILRYARLWMQLTEPVGTSRSAYEVEPAIAPLSVVAQHNTWHQNLRLGC*
Ga0075435_1007320911	3300007076	Populus Rhizosphere	MRAAANEYRAKAFERLSLAECANDAERRAEFLRYARWWMQLAEPVGTPRSAYEVEPQHNRWQQILRHKG*
Ga0075435_1020072402	3300007076	Populus Rhizosphere	MRAAANEYRARAFECLSLAECMTDPERRADILRYARLWMQLTEPVGISRNAYEVGSAPLSVVAQ
Ga0066710_1018771062	3300009012	Grasslands Soil	MRAAANKYRAKAFECLSLAECMADPERRAEILRYARLWMQLTEPVGTSRSAYEVGSAPLSVVA
Ga0126374_102406623	3300009792	Tropical Forest Soil	MRAAANEYRAKAFECLSLAECMTDPERRAEIIRYARWWMQLTEPVGTSRSAYEVEPAIASLSVVAQHNTWQQNLRHKG*
Ga0126380_101511011	3300010043	Tropical Forest Soil	MRAAANEYRAKAFECLSLAECMNDPERRAELLRYARWWTQLTEPLGPSRSAY
Ga0126380_123070101	3300010043	Tropical Forest Soil	MRAAANKYRAKAFECLSLAECMPDPERRAEILRYARLWMQLTEPVGTSRSAYE
Ga0126384_100742826	3300010046	Tropical Forest Soil	MRAAANEYRAKAFERLSLAQCVNDAERRAEFLRYARWWMQLAEPVGTPRSAYEVEPQHNRWQQILRHQG*
Ga0126384_117643201	3300010046	Tropical Forest Soil	ECLSLAECMSDPERRAEFIRYARLWMQLTEPVGTYRSAYEVEPAIAPFSVVAQHNPWQQNLRLGC*
Ga0126382_116051071	3300010047	Tropical Forest Soil	MRAAANEYRAKAFECLSLAECMTDPERRAEIIRYARWWMQLTEPVGTSRSAYEVEPAIAPLSVVAQHNTGQLLHKGSISRF
Ga0126319_12317812	3300010147	Soil	MTAAANGYRAKAFECLSLAECMTDPERRAEILRYARLWMQLAEPVGTSRSAYEVEPAIAPLSVVAQHNTWQQNLRHKG*
Ga0127503_106252552	3300010154	Soil	MRAAANKYRAKAFESLSLAEGMNDPECRAEILRYARLWMQLGEPVGTSRSAYEVGPAIAFLPLDAL*
Ga0126370_103029192	3300010358	Tropical Forest Soil	MRAAANQYRAKAFECLSLAECMTDPERRAEIIRYARWWMQLTEPVGTSRSAYEVEPAIASLSVVAQHNTWQQNLRHKG*
Ga0126370_111244894	3300010358	Tropical Forest Soil	MRAAANEYRAKAFECLSLAECMTDPKRRAEIIRYARWWMQLTEPVGTSRSAYEVEPAIAS
Ga0126376_115463411	3300010359	Tropical Forest Soil	MSAATNEYRAKAFAECMTDPERRAEILRYARWWMQLTEPLGPSRSAYEVEAAIAPSSVVAKHNTWQQILHHKG*
Ga0126378_124768441	3300010361	Tropical Forest Soil	MRAAANNYRAKAFECLSLAECMADPERRAEFLRYGRLWMQLAEPVGTSRWAYEVPPR
Ga0126377_121401762	3300010362	Tropical Forest Soil	AFECLSLAECMTDPERRAEILRYARWWMQLAEPVGTSQSAYEVEPAIAPLSVVAQHNTWQQNLRLGWS*
Ga0126377_125696141	3300010362	Tropical Forest Soil	MRAAANEYRAKAFECLSLAECMADPERRAEILRYARLWMQLTEPVGTSRSAYEVEPAIAPLSVVAQH
Ga0126379_114715622	3300010366	Tropical Forest Soil	MRAAANNYRSKAFECLSQAECMTDPERRAEILRYAQWWMQLAEPVGTSRGAYEVGPAIAPLSVVAQHNTWQQNLR
Ga0126381_1009922963	3300010376	Tropical Forest Soil	MRAAANEYRAKAFERLSLAQCVNDAERRAEFLRYARWWMQLAEPVGTPRSAYEVEP
Ga0126383_105810873	3300010398	Tropical Forest Soil	MRAAANEYRAKAFERLSLAECVNDPERRAEFLRYARWWMQLAEPVGTPRSAYEVESRHNRWQQILRHKG*
Ga0126383_115126852	3300010398	Tropical Forest Soil	MRAAANEYRAKAFERLSLAECVNDAERRAEFLRYARWWMQLAEPVGTPRSAYEVEILRHKG*
Ga0124844_12323491	3300010868	Tropical Forest Soil	MRAAANEYRAKAFERLSLAECVNDAERRAEFLRYARWWMQLAEPVGTPRSAYEVEPQHNRWQQILRQSPRLNIP
Ga0137364_102340853	3300012198	Vadose Zone Soil	MSAAANKYRAKAFECLSLAECMTDPERRAEILRYARWWMQLAEPVGTPRSAYEVEPQHNRWQQILRHKG*
Ga0137365_102813594	3300012201	Vadose Zone Soil	SQIGASWEFLMRAAANEYRAKAFECLSLAECMNDPENRAEILRYARMWMQLAEPVEKFRGAYEVRSRG*
Ga0137363_106258481	3300012202	Vadose Zone Soil	MRAAANKYRAKAFESLSLAEGMNDPERRAEILRYARLWMQLAEPIGTSRSAYEVEPAIAPLSVNIAFLPLDAL*
Ga0137374_102661073	3300012204	Vadose Zone Soil	MRAAANEYRAKAFECVSLAECMNDPENRAEILRYARMWMQLAEPVEKVRGAYEMSSRG*
Ga0137362_116132692	3300012205	Vadose Zone Soil	AAANEYRAKAFEWLSLAECMSDPERRAEILRYARLWMQLTEPVGTSRSAYEVEPAIAPLSVVAQHNTWQQILRH*
Ga0137376_108560431	3300012208	Vadose Zone Soil	MRAAANEYRAKAFECLSLAECMTDPERRAEILRYARWWMQLTEPLGTSRSAYEVEPAIAPLSVVAQHNTWHQNLRLGC*
Ga0137378_112820622	3300012210	Vadose Zone Soil	NAANEYRAKAFECLSLAECMNNPENRAEILRYARMWMQLAEPVEKFRGAYEVRSRR*
Ga0137370_107206961	3300012285	Vadose Zone Soil	MRAAANEYRAKAFECLSLAECMTDPERRAEFLRYARWWMQLAEPVGTPRSAYEAEPQHNRWQQILRHKG*
Ga0137372_1000751721	3300012350	Vadose Zone Soil	MRNAANEYRAKALECLSLAECMNDLENRAEILRYARMWMQLAEPVEKVRGAYEMSSRG*
Ga0137372_104535312	3300012350	Vadose Zone Soil	MRAAANEYRAKAFECLSLAECMNNPENRAEILRYARMWMQLAEPVEKFRGAYEVRSRG*
Ga0137372_107479261	3300012350	Vadose Zone Soil	MRNAANEYRAKAFECVSLAECMNDPENRAEILRYARMWMQLAEPVEKVRGAYEMSSRG*
Ga0137366_101256812	3300012354	Vadose Zone Soil	MRAAANEYRAKAFECLSLAECMNNPENRGEILRYARMWMQLAEPVEKFRGAYEVRSRG*
Ga0137395_108514652	3300012917	Vadose Zone Soil	MRAAANEYRAKAFECLSLAEGMNDPECRAEILRYARLWMQLAEPVGTSRSAYEVEPAIAPL*
Ga0137359_104522341	3300012923	Vadose Zone Soil	MRAADRAKAFECLSLAECMSDPERRAEILRYARLWMQLTEPVGTSRSAYEVEPAIAPLSVNIAFLPLDAL*
Ga0126375_106483502	3300012948	Tropical Forest Soil	MRAAANEYRAKAFECLSLAECMTDPERRAEILRYARWWMQLTEPLGTSRSAYEVEPAIAPLSVVAQHNTWQQNLRHKG*
Ga0164300_101522775	3300012951	Soil	MRAAANEYRARAFECLSLAECMTDPERRAEILRYARWWMQLAEPVGTSRSAYEVESAIAPLSVVVQHNTWQQNLRHKG*
Ga0164302_102190652	3300012961	Soil	MRAAANEYRARAFECLSLAECMTDPERRAEILRYARWWMQLAEPVGTSRSAYEV*
Ga0126369_108319592	3300012971	Tropical Forest Soil	MRAAANEYRAKAFECLSLAECMNDPERRAEILRYARWWTQLTEPVGTSRSPYEVEPAIAPLSVVAQHNTWQQNLR
Ga0126369_137141761	3300012971	Tropical Forest Soil	MRAAANEYRAKAFECLSLAECMTHPERRAEILRYARWWMQLTEPLGTSRSAYEVEPAIAPLSVVAQHNPWQQNSRH*
Ga0164304_111383303	3300012986	Soil	MRAAANEYRARAFECLSLAECMTDPERRAEILRYARWWMQLAEPVGTSRSAYEVGSAPLSVVAQH
Ga0132258_126616792	3300015371	Arabidopsis Rhizosphere	MRAAANEYRAKAFERVSLAECMTDPERRAEFLRYARWWMQLAEPPRSAYEVESQHNRWQQILRYKG*
Ga0132256_1004707812	3300015372	Arabidopsis Rhizosphere	MSAAANQYRAKAFECLSLAECMPDPERRAEILRYARLWMQLTEPVGPSRSAYEVGSAPLSVVAQHNTWHQNLGLGC*
Ga0182033_102492373	3300016319	Soil	AAANAYRAKAFECLSLAECMNDPERRAELLQYARLWMQLTEPVRPYRSAYEVEPAIAPLSVVAQHW
Ga0182034_118476921	3300016371	Soil	RRSLMRAAANEYRAKAFECLSLAECMNDPERRAEILRYAQWWTQLTEPVGTFRNAYEVEPANGPI
Ga0182040_102355413	3300016387	Soil	MRAAANEYRAKAFECLSLAECMTDPESRAEILRYARWWMQLTEPVGTYRSAYEVEPAIGPLSRFCS
Ga0182037_119432531	3300016404	Soil	MRAAANEYRAKAFECLSLAECMADPESRAEILRYARWWMQLTEPVGTSRSAYEVEAAIAPLSVVAQHNTWQQNLRLGWS
Ga0182039_109856081	3300016422	Soil	MRSANGYRAKAFECLSLGECMTDPERRAEILRYARWWMQLTEPLGTSRSAYEVEPAIAPLSVVAQHNTWQQNFHHKG
Ga0182038_111735561	3300016445	Soil	MRAAANEYRGKAFECLSLAECMNDPERRAEILRYARWWTQLTEPVGTYRSPYEVESAIAPLSVVAQHNTWQQILRHEG
Ga0257159_10506511	3300026494	Soil	MRAAANEYRAKAFECLSLAEGMNDPECRAEILRYARLWMQLAEPVGTSRSAYEVEPAIAPLSVVVQHNTWQQNLRHK
Ga0209684_10328142	3300027527	Tropical Forest Soil	MRAAANEYRAKAFECLSLAECMTDPERRAEIIRHARWWMQLTEPVGTSRSAYEVEPAIASLSVVAQHNTWQQNLRHKG
Ga0209465_102472472	3300027874	Tropical Forest Soil	MRAAANEYRAKAFERLSLAECVNDAERRAEFLRYARWWMQLAEPVGTPRSAYEVEPQHNQWQQILRHKG
Ga0318541_100442612	3300031545	Soil	MRAAANEYRAKAFECLSLAECMADPESRAEILRYARWWMQLTEPVGTSRSAYEVEAVIGP
Ga0318541_101201652	3300031545	Soil	MRAAANEYRAKAFECLSLAECMAKPEHRAEILRYARWWMQLAEPVGTFRSAYEVEPALEL
Ga0318538_103293433	3300031546	Soil	NEYRAKAFECLSLAECMAKPEHRAEFLRYARWWMQLAEPVGTFRSAYEVEPALELV
Ga0318538_105703612	3300031546	Soil	MRAAANEYRAKAFECLSLAECMNDSERRAEILRYARWWTQLTEPVETSRSAYEVEAAIAPLSVVAQHSA
Ga0318528_101163292	3300031561	Soil	MRAAANKYRAKAFECLSLAECMNDPERRAEILRYARWWTQLTEPVGTYRSPYEVESAIAPLSVVAQHNTWQQNLRLGWS
Ga0310915_103676532	3300031573	Soil	MRAAANEYRAKAFECLSLAECMTDPESRAEILRYARWWMQLTEPVGTSRSAYEVEAAI
Ga0318555_105577022	3300031640	Soil	MRAAANEYRAKAFECLSLAECMNDPERRAEILRYARWWTQLTEPLGPSRSAYE
Ga0318542_102749062	3300031668	Soil	MRAAANEYRGKAFECLSLAECMNDPERRAEILRYARWWTQLTEPVGTSRSAYEVEAAIAPLSVVAQHSA
Ga0318561_103690142	3300031679	Soil	TGKLLRSLMRAAANEYRAKAFECLSLAECMAKPEHRAEILRYARWWMQLAEPVGTFRSAYEVEPALELV
Ga0318561_104524911	3300031679	Soil	VAANEYRAKAFECLSLAECMNDPERRAEILRYARWWTQLTEPVGTYRSPYEVESAIAPLSVVAQHNTWQQILRHEG
Ga0306917_107651321	3300031719	Soil	MRAATNAYRAKAFECLSLAECMNDPERRAELLQYARLWMQLTEPVGTFRSAYEVEPAIAPLSFVAQHWQQILRHKG
Ga0306917_115684371	3300031719	Soil	MRAAANAYRAKAFECLSLAECMNDPERRAELLQYARWWMQLAEPLGTFPSAYEVEPAIAPLSVVAQHWQQILRHKG
Ga0318500_101065822	3300031724	Soil	MRAAANEYRAKAFECLSLAECMNDPERRAEILRYARWWTQLTEPVGTYRSPYEVESAIAPLSVVAQHNTWQQILRHEG
Ga0306918_100009297	3300031744	Soil	MRAAANEYRAKAFECLSQAECMNDPERRAEFLRYARWWMQLAEPIGAYRSAYEVEPAIAPLSVVAQHWQQNLRHKG
Ga0306918_100984343	3300031744	Soil	MRAAANEYRAKAFEWLSLAECMNDPERRAEILRYARWWTQLTEPVGTPRSAYEVEPHHDRWQQILRH
Ga0306918_105282342	3300031744	Soil	MRAAANAYRAKAFECLSLAECMNDPERRAELLQYARLWMQLTEPVGTFRSAYEVEPAIAPLSFVAQHWQQILRHKG
Ga0306918_108017111	3300031744	Soil	MRAAANAYRAKAFECLSLAECMNDPERRAELLQYARLWMQLTEPVRPYRSAYEVEPAIAPLSVVAQHWQ
Ga0318502_105156691	3300031747	Soil	MRAAANEYRAKAFEYLSLAECMNDPERRAEILRHARWWTQLTEPVGTFRSAYEVEAAIAPLS
Ga0318509_103412451	3300031768	Soil	MRAAANEYRAKAFECLSLAECMAKPEHRAEILRYARWWMQLAEPVGTFRSAYEVEPALE
Ga0318546_102128071	3300031771	Soil	GDHLQMRTGKLLRSLMRAAANEYRAKAFECLSLAECMAKPEHRAEFLRYARWWMQLAEPVGTFRSAYEVEPALELV
Ga0318546_103282782	3300031771	Soil	MRAAANAYRAKAFECLSLAECMNDPERRAELLQYARLWMQLTEPVRPYRSAYEVEPAIAPLSVVAQHWQQILR
Ga0318546_106301911	3300031771	Soil	MRAAANEYRAKAFEWLSLAECMTDPERRAEILRYARWWMQLTEPVGTSRSAYEVEPA
Ga0318547_101884482	3300031781	Soil	MRAAANEYRAKAFEWLSLAECMTDPERRAEILRYARWWMQLTEPVGTYRSAYEVEPAIGPLSRFCS
Ga0318529_102907622	3300031792	Soil	MRAAANEYRAKAFECLSLAECMNDPERRAEILRYARWWTQLTEPVETSRSAYEVEAAIAPLSVVAQHSA
Ga0318557_105258092	3300031795	Soil	MRAAANKYRAKAFECLSLAECMNDPERRAEILRYARWWTQLTEPVGTYRSPYEVESAIAPLSVVAQHNT
Ga0318576_101311111	3300031796	Soil	MRAAANAYRAKAFECLSLAECMNDPERRAELLQYARLWMQLTEPVRPYRSAYEVEPAIAP
Ga0310917_102277462	3300031833	Soil	MRAAANEYRAKAFEWLSLAECMNDPERRAEILRYARWWTQLTEPVGTPRSAYEVEPHHNRWQQILRH
Ga0310917_107549831	3300031833	Soil	MRAAANAYRAKAFECLSLAECMNDPERRAELLQYARLWMQLTEPVGTFRSAYEVEPAIAPLSVVAQHWQQILRHKG
Ga0306919_100465486	3300031879	Soil	MRAAANEYRAKAFECLSLAECMAKPEHRAEFLRYARWWMQLAEPVGTFRSAYEVEPALEL
Ga0306919_111546881	3300031879	Soil	AYRAKAFECLSLAECMNDPERRAELLQYARLWMQLTEPVRPYRSAYEVEPAIAPLSVVAQHW
Ga0306925_100938726	3300031890	Soil	MRAAANAYRAKAFECLSLAECMNDPERRAELLQYARLWMQLTEPVRPYRSAYEVEPAIAPLSVVAQHW
Ga0306925_101550102	3300031890	Soil	MLRRSPMRAAANKYRAKAFECLSLAECMNDPERRAEILRYARWWTQLTEPVGTYRSPYEVESAIAPLSVVAQHNTWQQILRHEG
Ga0306925_107700111	3300031890	Soil	MRAAANEYRAKAFECLSLAECMNDPERRAEILRYARWWTQLTEPVGTSRSAYEVEAAIAPLSVVAQHSA
Ga0306925_114568232	3300031890	Soil	MRAAANAYRAKAFECLSLAECMNDPERRAELLQYARWWMQLAEPLGTFPSAYEVEPAIAPLTVVAQHWQQILRHKG
Ga0318520_108252631	3300031897	Soil	MRAAANAYRAKAFECLSLAECMNDPERRAELLQYARLWMQLTEPVRPYRSAYEVEPAIAPLSVVAQHWQQILRHKG
Ga0306923_103472591	3300031910	Soil	MRAAANEYRAKAFECLSLAECMTDPERRAEILRYARWWMQLTEPVGTYRSAYEVEPAIGPLSRFCS
Ga0306921_101118031	3300031912	Soil	KALGLTVPDLMRAAVNEYRAKAFERLSLAECTTDPECRAEFLRYARWWMQLAEPVGTPRSAYEVEPHHDRWQQILRH
Ga0306921_101759163	3300031912	Soil	MRAAANEYRAKAFECLSQAECMNDPERRAEFLRYARWWMQLAEPIGAYRSAYEVEPSTSQRERAY
Ga0306921_101809282	3300031912	Soil	MRAAANKYRAKAFECLSLAECMNDPERRAEILRYARWWTQLTEPVGTYRSPYEVESAIAPLSVVAQHNTWQQILRHEG
Ga0310912_100806691	3300031941	Soil	MRAAANEYRAKAFECLSQAECMNDPERRAEFLRYARWWMQLAEPIGAYRSAYEVE
Ga0310916_101592921	3300031942	Soil	RAKAFECLSLAECMNDPERRAELLQYARWWMQLAEPLGTFPSAYEVEPAIAPLTVVAQHWQQILRHKG
Ga0310910_103333891	3300031946	Soil	SLMRAAANEYRAKAFEWLSLAECMNDPERRAEILRYARWWTQLTEPVGTPRSAYEVEPHHDRWQQILRH
Ga0310909_110169701	3300031947	Soil	MRAAANQYRAKAFECLSLAECMTDPERRAEILRYARLWMQLTEPVGTSRSAYEVEPAIAPLSVVAQRNT
Ga0306926_105691931	3300031954	Soil	MRAAANEYRGKAFECLSLAECMNDPERRAEILRYARWWTQLTEPVGTSRSAYE
Ga0306926_110916502	3300031954	Soil	MRAAGNEYRAKAFECLSLAESMNDPENRAEILRYARMWMQLAEPAEKFRSAYEVPNRG
Ga0318530_100865492	3300031959	Soil	MRVAANEYRAKAFECLSLAECMTDPERRAEILRYARWWMQLTEPLGTSRSAYEVEPAIAPLSVVAQHWQQNLRHKG
Ga0318530_103383921	3300031959	Soil	MRAAANAYRAKAFECLSLAECMNDPERRAELLQYARLWMQLTEPVRPYRSAYEVEPAIAPLSVVAQH
Ga0306922_100869036	3300032001	Soil	MRAAANEYRAKAFECLSLAECMAKPEHRAEILRYARWWVQLAEPVGTFRSAYEVEPALEL
Ga0306922_106511331	3300032001	Soil	MRAAANEYRAKAFECLSLAECMTDPESRAEILRYARWWMQLTEPVGTSRSAYEVEAVIGP
Ga0306922_113400982	3300032001	Soil	MRAAANAYRAKAFECLSLAECMNDPERRAELLQYARWWMQLAEPVGTFRSAYEAEPAIAPLSVVAQHWQQILRHKG
Ga0318507_105531651	3300032025	Soil	MRAAANAYRAKAFECLSLAECMNDPERRAELLQYARLWMQLTEPVRPYRSAYEVEPAIAPLSV
Ga0318559_103530871	3300032039	Soil	MRAAANEYRAKAFECLSLAECMNDPERRAEILRYAQWWTQLTEPVGTFRNAYEVEPANGP
Ga0318558_106260671	3300032044	Soil	MRAAANEYRAKAFECLSLAECMNDPERRAEILRYARWWTQLTEPVGTPRSAYEVEPH
Ga0318570_103927452	3300032054	Soil	MRAAANEYRAKAFECLSLAECMTDPERRAEILRYARWWIQLTEPVGTSRSAYEVEPAIAPLSVVAQH
Ga0318505_104210371	3300032060	Soil	MRAAANEYRAKAFECLSLAECMTDPESRAEILRYARWWMQLTEPVGTSRSAYEVEAAIAPLSVVAQHNTWQ
Ga0318504_105023101	3300032063	Soil	MRAAANEYRAKAFEYLSLAECMNDPERRAEILRHARWWTQLTEPVGTFRSAYEV
Ga0318540_105116201	3300032094	Soil	MRAAANEYRAKAFECLSQAECMNDPERRAEFLRYARWWMQLAEPIGAYRSAYEVEPAIAP
Ga0307471_1014588892	3300032180	Hardwood Forest Soil	MRAAANEYRAKAFERLSLAECMTDPERRVEFLRYARWWMQLAEPVGTPRSAYEVESRHARWQQILRHKG
Ga0306920_1004927564	3300032261	Soil	MRAAANEYRAKAFEYLSLAECMNDPERRAEILRHARWWTQLTEPVGTFRSAYEVEAAIAPLSVVAQHNTWQQILHHNG
Ga0306920_1005726272	3300032261	Soil	MRAAANAYRAKGFECLSQAECMNDPERRAELLQYARWWMQLAEPVGTFRSAYEAEPAIAPLSVVAQHWQQILRHKG
Ga0306920_1008980263	3300032261	Soil	DLLQISFWRSLMRAAANAYRAKAFECLSLAECMNDPERRAELLQYARLWMQLTEPVGTFRSAYEVEPAIAPLSFVAQHWQQILRHKG
Ga0306920_1009593923	3300032261	Soil	MRAAANEYRGKAFECLSLAECMNDPERRAEILRYARWWTQLTKPVGTSRSAYEVEAAIAPLSVVAQHSA
Ga0306920_1019373012	3300032261	Soil	MRAAANEYRAKAFECLSLAESMNDPENRAEILRYARMWMQLAEPAEKFRSAYEVPNRG
Ga0306920_1033219201	3300032261	Soil	MRAAANEYRAKALEWLSLAECMNDPERRAELLRYAQWWMQLTEPVGPSRSAYEAEPAIVPLSVAAQHNTWQQNLRLGWS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F033938

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences