Metagenome / Metatranscriptome Family F034275

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F034275
Family Type	Metagenome / Metatranscriptome
Number of Sequences	175
Average Sequence Length	56 residues
Representative Sequence	MQDRVDDPPVVRCPGCNQPMEAKERTPVKEGLVDIRYVCAGCGMETKRPIADEAH
Number of Associated Samples	135
Number of Associated Scaffolds	175

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	58.29 %
% of genes near scaffold ends (potentially truncated)	41.71 %
% of genes from short scaffolds (< 2000 bps)	89.14 %
Associated GOLD sequencing projects	131
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.53

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (52.571 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (20.000 % of family members)
Environment Ontology (ENVO)	Unclassified (27.429 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (60.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 33.73% Coil/Unstructured: 66.27%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.53
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.53
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 175 Family Scaffolds
PF00550	PP-binding	11.43
PF04392	ABC_sub_bind	3.43
PF03480	DctP	2.86
PF08734	GYD	2.29
PF02518	HATPase_c	2.29
PF03401	TctC	1.14
PF13424	TPR_12	1.14
PF13505	OMP_b-brl	0.57
PF13676	TIR_2	0.57
PF07311	Dodecin	0.57
PF08530	PepX_C	0.57
PF00753	Lactamase_B	0.57
PF10276	zf-CHCC	0.57
PF08281	Sigma70_r4_2	0.57
PF06537	DHOR	0.57
PF04606	Ogr_Delta	0.57

COG ID	Name	Functional Category	% Frequency in 175 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	3.43
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	2.29
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	1.14
COG3488	Uncharacterized conserved protein with two CxxC motifs, DUF1111 family	General function prediction only [R]	0.57
COG2936	Predicted acyl esterase	General function prediction only [R]	0.57
COG3360	Flavin-binding protein dodecin	General function prediction only [R]	0.57

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.57 %
All Organisms	root	All Organisms	47.43 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.57 %
cellular organisms	root	All Organisms → cellular organisms	47.43 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.57 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	47.43 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.57 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	39.43 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.14 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.57 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	37.71 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.14 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.57 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	9.71 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6.86 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.14 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.57 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	9.14 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.86 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	1.14 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.14 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.57 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	9.14 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.71 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	1.14 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.14 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.57 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	9.14 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.71 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.14 %
unclassified Microvirga	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → unclassified Microvirga	0.57 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.57 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	9.14 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.71 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.14 %
Microvirga sp. R24	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → unclassified Microvirga → Microvirga sp. R24	0.57 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.57 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_16764405	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1887	Open in IMG/M
2124908045\|KansclcFeb2_ConsensusfromContig570847	Not Available	586	Open in IMG/M
2170459021\|G14TP7Y01BMHCD	Not Available	571	Open in IMG/M
3300000550\|F24TB_11019894	Not Available	643	Open in IMG/M
3300000580\|AF_2010_repII_A01DRAFT_1040253	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	724	Open in IMG/M
3300000580\|AF_2010_repII_A01DRAFT_1064617	Not Available	557	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10008626	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2806	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10015852	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2069	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1000612	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6322	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10001487	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5035	Open in IMG/M
3300000956\|JGI10216J12902_114788118	Not Available	785	Open in IMG/M
3300002914\|JGI25617J43924_10053649	All Organisms → cellular organisms → Bacteria	1469	Open in IMG/M
3300004114\|Ga0062593_101840191	Not Available	667	Open in IMG/M
3300004480\|Ga0062592_100914870	Not Available	792	Open in IMG/M
3300004633\|Ga0066395_10265058	Not Available	926	Open in IMG/M
3300005166\|Ga0066674_10371585	Not Available	669	Open in IMG/M
3300005167\|Ga0066672_10343285	All Organisms → cellular organisms → Bacteria	974	Open in IMG/M
3300005172\|Ga0066683_10084941	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1909	Open in IMG/M
3300005177\|Ga0066690_10681431	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	682	Open in IMG/M
3300005178\|Ga0066688_10948584	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	527	Open in IMG/M
3300005179\|Ga0066684_10392196	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	932	Open in IMG/M
3300005332\|Ga0066388_100020011	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	5813	Open in IMG/M
3300005332\|Ga0066388_100740399	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1584	Open in IMG/M
3300005332\|Ga0066388_101832045	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1080	Open in IMG/M
3300005332\|Ga0066388_101963137	Not Available	1047	Open in IMG/M
3300005332\|Ga0066388_105523351	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	640	Open in IMG/M
3300005332\|Ga0066388_107121716	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	562	Open in IMG/M
3300005355\|Ga0070671_101812268	Not Available	542	Open in IMG/M
3300005363\|Ga0008090_15859818	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	708	Open in IMG/M
3300005450\|Ga0066682_10456350	Not Available	812	Open in IMG/M
3300005454\|Ga0066687_10164420	Not Available	1185	Open in IMG/M
3300005468\|Ga0070707_100800168	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	906	Open in IMG/M
3300005471\|Ga0070698_100408456	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1292	Open in IMG/M
3300005518\|Ga0070699_100251348	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1579	Open in IMG/M
3300005535\|Ga0070684_100042846	Not Available	3908	Open in IMG/M
3300005549\|Ga0070704_101826291	Not Available	563	Open in IMG/M
3300005552\|Ga0066701_10077184	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1901	Open in IMG/M
3300005553\|Ga0066695_10407252	Not Available	842	Open in IMG/M
3300005557\|Ga0066704_11024142	Not Available	509	Open in IMG/M
3300005713\|Ga0066905_100056283	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2442	Open in IMG/M
3300005713\|Ga0066905_100559677	Not Available	961	Open in IMG/M
3300005713\|Ga0066905_100787862	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	823	Open in IMG/M
3300005764\|Ga0066903_101398634	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1314	Open in IMG/M
3300005764\|Ga0066903_101731412	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1191	Open in IMG/M
3300005764\|Ga0066903_101765479	Not Available	1180	Open in IMG/M
3300005764\|Ga0066903_103116023	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	897	Open in IMG/M
3300005764\|Ga0066903_106249055	Not Available	622	Open in IMG/M
3300005764\|Ga0066903_107775481	Not Available	551	Open in IMG/M
3300005937\|Ga0081455_10009482	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	10009	Open in IMG/M
3300006032\|Ga0066696_10406266	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	889	Open in IMG/M
3300006175\|Ga0070712_100244149	All Organisms → cellular organisms → Bacteria	1432	Open in IMG/M
3300006796\|Ga0066665_10493973	Not Available	1003	Open in IMG/M
3300006853\|Ga0075420_100102631	All Organisms → cellular organisms → Bacteria	2524	Open in IMG/M
3300006854\|Ga0075425_102481883	Not Available	574	Open in IMG/M
3300006904\|Ga0075424_102468034	Not Available	545	Open in IMG/M
3300007258\|Ga0099793_10253775	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	849	Open in IMG/M
3300009012\|Ga0066710_102068226	Not Available	839	Open in IMG/M
3300009094\|Ga0111539_12285274	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	627	Open in IMG/M
3300009137\|Ga0066709_101833836	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	849	Open in IMG/M
3300010043\|Ga0126380_11356510	Not Available	622	Open in IMG/M
3300010046\|Ga0126384_11696307	Not Available	597	Open in IMG/M
3300010047\|Ga0126382_11130027	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	697	Open in IMG/M
3300010320\|Ga0134109_10475493	Not Available	512	Open in IMG/M
3300010358\|Ga0126370_10270501	Not Available	1330	Open in IMG/M
3300010359\|Ga0126376_10076056	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2477	Open in IMG/M
3300010359\|Ga0126376_10153747	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1847	Open in IMG/M
3300010359\|Ga0126376_10612885	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1032	Open in IMG/M
3300010361\|Ga0126378_12484087	Not Available	592	Open in IMG/M
3300010366\|Ga0126379_10234419	Not Available	1794	Open in IMG/M
3300010376\|Ga0126381_100079448	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4120	Open in IMG/M
3300010376\|Ga0126381_101992610	Not Available	837	Open in IMG/M
3300010376\|Ga0126381_102469807	Not Available	745	Open in IMG/M
3300010376\|Ga0126381_103162265	Not Available	651	Open in IMG/M
3300010398\|Ga0126383_13269255	Not Available	529	Open in IMG/M
3300010398\|Ga0126383_13370786	Not Available	522	Open in IMG/M
3300011270\|Ga0137391_11580332	Not Available	500	Open in IMG/M
3300012189\|Ga0137388_11863208	Not Available	532	Open in IMG/M
3300012198\|Ga0137364_10840672	Not Available	694	Open in IMG/M
3300012198\|Ga0137364_10933490	Not Available	657	Open in IMG/M
3300012199\|Ga0137383_10238921	Not Available	1332	Open in IMG/M
3300012199\|Ga0137383_10595624	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	809	Open in IMG/M
3300012201\|Ga0137365_10817095	Not Available	681	Open in IMG/M
3300012202\|Ga0137363_10119591	Not Available	2030	Open in IMG/M
3300012202\|Ga0137363_10239928	Not Available	1470	Open in IMG/M
3300012204\|Ga0137374_10188635	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1790	Open in IMG/M
3300012210\|Ga0137378_10080974	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2961	Open in IMG/M
3300012211\|Ga0137377_10658141	Not Available	983	Open in IMG/M
3300012361\|Ga0137360_10055421	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2874	Open in IMG/M
3300012361\|Ga0137360_10675619	Not Available	886	Open in IMG/M
3300012362\|Ga0137361_10203400	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1792	Open in IMG/M
3300012362\|Ga0137361_11123602	Not Available	707	Open in IMG/M
3300012917\|Ga0137395_10034830	All Organisms → cellular organisms → Bacteria	3068	Open in IMG/M
3300012917\|Ga0137395_10152527	All Organisms → cellular organisms → Bacteria	1583	Open in IMG/M
3300012924\|Ga0137413_11133961	Not Available	620	Open in IMG/M
3300012948\|Ga0126375_10850729	Not Available	728	Open in IMG/M
3300012948\|Ga0126375_11522954	Not Available	573	Open in IMG/M
3300012972\|Ga0134077_10385360	Not Available	603	Open in IMG/M
3300012975\|Ga0134110_10079287	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1313	Open in IMG/M
3300012977\|Ga0134087_10048824	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1662	Open in IMG/M
3300014150\|Ga0134081_10079844	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1009	Open in IMG/M
3300016270\|Ga0182036_10359713	All Organisms → cellular organisms → Bacteria → Proteobacteria	1124	Open in IMG/M
3300016270\|Ga0182036_10884533	Not Available	731	Open in IMG/M
3300016294\|Ga0182041_10416107	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1147	Open in IMG/M
3300016357\|Ga0182032_10876554	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	762	Open in IMG/M
3300016387\|Ga0182040_10288289	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1250	Open in IMG/M
3300016387\|Ga0182040_10609817	All Organisms → cellular organisms → Bacteria	884	Open in IMG/M
3300016387\|Ga0182040_11952860	Not Available	504	Open in IMG/M
3300016445\|Ga0182038_11985990	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	527	Open in IMG/M
3300018028\|Ga0184608_10055754	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → unclassified Microvirga → Microvirga sp. R24	1569	Open in IMG/M
3300018067\|Ga0184611_1176210	Not Available	760	Open in IMG/M
3300018072\|Ga0184635_10144125	Not Available	950	Open in IMG/M
3300018433\|Ga0066667_10067957	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2239	Open in IMG/M
3300018433\|Ga0066667_11071788	Not Available	697	Open in IMG/M
3300018482\|Ga0066669_11121856	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	710	Open in IMG/M
3300021560\|Ga0126371_10435765	All Organisms → cellular organisms → Bacteria	1456	Open in IMG/M
3300021560\|Ga0126371_11401811	Not Available	830	Open in IMG/M
3300021560\|Ga0126371_11768923	Not Available	740	Open in IMG/M
3300026306\|Ga0209468_1044276	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1523	Open in IMG/M
3300026308\|Ga0209265_1214056	Not Available	524	Open in IMG/M
3300026317\|Ga0209154_1294285	Not Available	536	Open in IMG/M
3300026354\|Ga0257180_1059210	Not Available	550	Open in IMG/M
3300026494\|Ga0257159_1012957	Not Available	1320	Open in IMG/M
3300026540\|Ga0209376_1366276	Not Available	541	Open in IMG/M
3300026548\|Ga0209161_10559295	Not Available	510	Open in IMG/M
3300027502\|Ga0209622_1015314	Not Available	1319	Open in IMG/M
3300027654\|Ga0209799_1025161	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1311	Open in IMG/M
3300027748\|Ga0209689_1396452	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	528	Open in IMG/M
3300028755\|Ga0307316_10078309	Not Available	1136	Open in IMG/M
3300028793\|Ga0307299_10036940	All Organisms → cellular organisms → Bacteria	1785	Open in IMG/M
3300028811\|Ga0307292_10113654	All Organisms → cellular organisms → Bacteria	1073	Open in IMG/M
3300028819\|Ga0307296_10070271	Not Available	1860	Open in IMG/M
3300028828\|Ga0307312_11028298	Not Available	545	Open in IMG/M
3300028878\|Ga0307278_10110930	Not Available	1233	Open in IMG/M
3300031152\|Ga0307501_10029446	Not Available	1113	Open in IMG/M
3300031231\|Ga0170824_112343029	Not Available	541	Open in IMG/M
3300031544\|Ga0318534_10198516	Not Available	1158	Open in IMG/M
3300031545\|Ga0318541_10670662	Not Available	579	Open in IMG/M
3300031546\|Ga0318538_10742352	Not Available	532	Open in IMG/M
3300031561\|Ga0318528_10207480	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1049	Open in IMG/M
3300031572\|Ga0318515_10022189	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3011	Open in IMG/M
3300031572\|Ga0318515_10705098	Not Available	534	Open in IMG/M
3300031573\|Ga0310915_10024391	All Organisms → cellular organisms → Bacteria → Proteobacteria	3714	Open in IMG/M
3300031573\|Ga0310915_10211447	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1358	Open in IMG/M
3300031573\|Ga0310915_10242968	All Organisms → cellular organisms → Bacteria	1266	Open in IMG/M
3300031668\|Ga0318542_10336054	Not Available	776	Open in IMG/M
3300031681\|Ga0318572_10348170	Not Available	878	Open in IMG/M
3300031713\|Ga0318496_10423099	All Organisms → cellular organisms → Bacteria	736	Open in IMG/M
3300031736\|Ga0318501_10693035	Not Available	561	Open in IMG/M
3300031751\|Ga0318494_10471302	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	731	Open in IMG/M
3300031751\|Ga0318494_10846323	Not Available	536	Open in IMG/M
3300031771\|Ga0318546_11152490	Not Available	545	Open in IMG/M
3300031833\|Ga0310917_10119850	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1712	Open in IMG/M
3300031860\|Ga0318495_10385616	Not Available	618	Open in IMG/M
3300031879\|Ga0306919_10415496	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1033	Open in IMG/M
3300031880\|Ga0318544_10029869	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1888	Open in IMG/M
3300031894\|Ga0318522_10206114	Not Available	744	Open in IMG/M
3300031910\|Ga0306923_11956882	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	596	Open in IMG/M
3300031912\|Ga0306921_10406633	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1588	Open in IMG/M
3300031912\|Ga0306921_12495985	Not Available	536	Open in IMG/M
3300031941\|Ga0310912_11015118	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	636	Open in IMG/M
3300031942\|Ga0310916_10306840	Not Available	1345	Open in IMG/M
3300031942\|Ga0310916_11458428	Not Available	559	Open in IMG/M
3300031945\|Ga0310913_10153594	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1592	Open in IMG/M
3300031945\|Ga0310913_10334214	Not Available	1071	Open in IMG/M
3300031947\|Ga0310909_10186606	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1718	Open in IMG/M
3300031954\|Ga0306926_11184872	Not Available	898	Open in IMG/M
3300032001\|Ga0306922_10004018	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	13873	Open in IMG/M
3300032008\|Ga0318562_10426891	Not Available	770	Open in IMG/M
3300032035\|Ga0310911_10333020	Not Available	875	Open in IMG/M
3300032039\|Ga0318559_10404370	Not Available	636	Open in IMG/M
3300032042\|Ga0318545_10139121	Not Available	860	Open in IMG/M
3300032060\|Ga0318505_10193728	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	950	Open in IMG/M
3300032063\|Ga0318504_10089794	All Organisms → cellular organisms → Bacteria → Proteobacteria	1362	Open in IMG/M
3300032064\|Ga0318510_10068958	Not Available	1292	Open in IMG/M
3300032261\|Ga0306920_100444113	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1927	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.00%
Host-Associated	Host-Associated	3.43%
Engineered	Engineered	0.57%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.29%
Plants	Host-Associated → Plants	3.43%
Aquatic	Environmental → Aquatic	1.71%
Solid Waste	Engineered → Solid Waste	0.57%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.29%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.86%
Sediment	Environmental → Aquatic → Sediment	1.71%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.57%
Grass	Engineered → Solid Waste → Grass	0.57%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	80.00%
Loam	Environmental → Terrestrial → Soil → Loam	14.29%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.29%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.71%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.57%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.57%
Composting	Engineered → Solid Waste → Grass → Composting	0.57%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	32.57%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.71%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	16.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.29%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.43%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.29%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.71%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.14%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.57%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.57%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.57%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.57%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	20.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	12.57%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.43%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	11.43%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	9.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.00%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	4.00%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.43%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.86%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.86%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.29%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.14%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.57%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.57%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.57%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.57%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.57%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.57%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.57%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
2170459021	Litter degradation NP4	Engineered	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300026308	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026354	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-04-B	Environmental	Open in IMG/M
3300026494	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-A	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300027502	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300031152	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_S	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_00523910	2088090014	Soil	MQDRVDDPPIVRCPGCDLPMEAKERTPVEERLVDVRYVCAGCGMETKRTIADEPR
KansclcFeb2_13884180	2124908045	Soil	GAGYAGSNGCPAFVRCPGCNQPMEAKERTPVKEGLVDIRYVCAGCGMETKRTIADEAH
4NP_02541580	2170459021	Switchgrass, Maize And Mischanthus Litter	LPGLAVQDQVNEPPVVRCPGCHQPMEAKERTSVTERLMDIRYVCGTCGMETKRTVAHEL
F24TB_110198942	3300000550	Soil	MQDRVDDPPIVRCPGCNQPMEAKERTPVKEGLVDIRYVCAGCGMETKRPIADEGH*
AF_2010_repII_A01DRAFT_10402531	3300000580	Forest Soil	MQDRVDDXPVVLCPGCNQPMEAKERTPVEERLVDIRYVCAGCGMETKRTVADDAQINRTS
AF_2010_repII_A01DRAFT_10646172	3300000580	Forest Soil	PVVRCPGCNQPMEAKGRTPVRGGLVDIRYVCAGCGMETKRPIADEAH*
AF_2010_repII_A1DRAFT_100086265	3300000597	Forest Soil	MQDPVDDPPVVRCPGCNQPMEAKERTPVKEGLVDIRYVCAGRGTETKRTIADEAY*
AF_2010_repII_A1DRAFT_100158522	3300000597	Forest Soil	MQDRVDDPPVVLCPGCNQPMEAKERTPVEERLVDIRYVCAGCGMETKRTVADDAQINRTS
AF_2010_repII_A100DRAFT_10006127	3300000655	Forest Soil	VGLVMQDRVDDXPVVRCPGCNQPMEAKERTPVKEGLVDIRYVCAGCGMETKRPIADEGH*
AF_2010_repII_A001DRAFT_100014872	3300000793	Forest Soil	VGLVMQDRVDDPPIVRCPGCNQPMEAKERTPVKGGLVDIRYVCAGCGMETKRPIADEGH*
JGI10216J12902_1147881181	3300000956	Soil	MQDSVDDPPIVRCPGCDQPMEARERTPVMERLVDIRYVCAGFGTETKRIVADEPR*
JGI25617J43924_100536493	3300002914	Grasslands Soil	MQDRVNDPPIVRCPGCDRPMEAKERTSVAERLVDIRYVCAGCGMDTKRTVADEAR*
Ga0062593_1018401912	3300004114	Soil	MQDRIDEPPVVRCPGCHHPMQPKERTSATERLVDIPYVCATCGMETKRTVAKESLKPTG*
Ga0062592_1009148701	3300004480	Soil	VQDQVNEPPVVRCPGCHQPMEAKERTSVTERLMDIRYVCGTCGMETKRTVAHE
Ga0066395_102650582	3300004633	Tropical Forest Soil	MQDRVDDPPVVRCPGCNQPMEARERTPVKEGLVDIRYVCAGCGMETKRPIADEAH*
Ga0066674_103715852	3300005166	Soil	MQDRVGDAPIVGCPGCDLPMEAKERTSVTEGLVDIRYVCPACGMETKRTVADEAVWCT*
Ga0066672_103432853	3300005167	Soil	MQDRVDEPPIVRCPGCDQPMEAKERTSLKERLVDIRYVCAGCGMETKRTVADETR*
Ga0066683_100849412	3300005172	Soil	MQDRVGDALIVGCPGCDLPMEAKERTSVTEGLVDIRYVCPACGMETKRTVADEAVWCT*
Ga0066690_106814312	3300005177	Soil	MQDRMDAPPSFDVPAAQPMEAKERTPVKEGLVDIRYVCAGCGMETR
Ga0066688_109485841	3300005178	Soil	MQDRVDEPPIVRCPGCDQPMEAKERTSLKERLVDIRHVCAGCGMETKRTVADE
Ga0066684_103921962	3300005179	Soil	MQDRVDDPPIVRCPGCDLPMEAKERTSVTEGLVDIRYVCPACGMETKRTVAR*
Ga0066388_1000200118	3300005332	Tropical Forest Soil	MRFLCGDCGGPAMQDRVNDPPIVRCPGCDRPMEAKERTSVAERPVDIRYVCDGCGMETKRTVADEAR*
Ga0066388_1007403991	3300005332	Tropical Forest Soil	MQDPVDDPPVVRCPGCNQPMEAKERTPVKESLVDIRYVCAGCGTETKRTIADEAH*
Ga0066388_1018320452	3300005332	Tropical Forest Soil	MQDRVDGPPVVRCPGCNQPMEAKERTPVKGGLVDIRYVCAGCGMETKRPIADEAH*
Ga0066388_1019631373	3300005332	Tropical Forest Soil	MQDRVDDAPIVRCPGCDQPMEAKERTPVMDRLVDILYVCAGCGMETKRTVADEAH*
Ga0066388_1055233512	3300005332	Tropical Forest Soil	MQDRVDDPPVVRCPGCNQPMEAKERTPVKEGLVDIRYVCAGCGMETKR
Ga0066388_1071217163	3300005332	Tropical Forest Soil	MQDRVDDPPVVRCPGCTQPMEARERTPVKEGLVDIRYVCAGCGMETKRPIADEAH*
Ga0070671_1018122682	3300005355	Switchgrass Rhizosphere	VQDQVNEPPVVRCPGCHQPMEAKERTSVTERLMDIRYVCGTCGMETKRTVAHEL*
Ga0008090_158598182	3300005363	Tropical Rainforest Soil	MGLVMQDRVDDPPVVRCPGCNQPMEAKERTPVKEGLVDIRYVCAGCGMETKRPIAD
Ga0066682_104563501	3300005450	Soil	MQDHVDDPPIVRCPGCDQPMEAKERTPVEERLVDIRYVCAGCGMETKRTVADEAD*
Ga0066687_101644202	3300005454	Soil	MQDRVDDPPIVRCPGCDQPMEAKERTPVMERLVDIRYVCAGCGTETKRIVADEAH*
Ga0070707_1008001681	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MQDRVDDPPVVRCPGCNQPMEAKERTPLKEGLVDIRYVCAGCGMET
Ga0070698_1004084562	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MQDRVDDPPVVRCPGCNQPMEAKERTPLKEGLVDIRYVCAGCGMETKRPIADEAH*
Ga0070699_1002513483	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	DTPPIVRCPGCDQPMEAKERTSLKERLVDIRYVCAGCGMETKRTVADQAH*
Ga0070684_1000428467	3300005535	Corn Rhizosphere	LPGLAVQDQVNEPPVVRCPGCHQPMEAKERTSVTERLMDIRYVCGTCGMETKRTVAHEL*
Ga0070704_1018262911	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	QVNEPPVVRCPGCHQPMEAKERTSVTERLMDIRYVCGTCGMETKRTVAHEL*
Ga0066701_100771841	3300005552	Soil	MQDRVDDPPIVRCPGCDQPMEAKERTPVMGRLVDIRYVCAGCGTETKRIVADEAH*
Ga0066695_104072521	3300005553	Soil	GAWAMQDRVDDPPIVRCPGCDQPMEAKERTPVMERLVDIRYVCAGCGTETKRIVADEAH*
Ga0066704_110241421	3300005557	Soil	MQDRVDEPPIVRCPGCDQPMEAKERTSLKERLVDIRYVCAGCGME
Ga0066905_1000562834	3300005713	Tropical Forest Soil	MQDRVDDPPIVRCPGCDRPMEAKERTSVAERLVDIRYVCDGCGMETKRTVADEAR*
Ga0066905_1005596772	3300005713	Tropical Forest Soil	MQDRVDDPPVVRCPGCNQPMEAKERTPKEGLVDIRYVCAGCGMETKRTIADEAH*
Ga0066905_1007878621	3300005713	Tropical Forest Soil	MGLVMQDRVDDSPVVRCPGCNQPMEAKERTPVKEGLVDIRYVCAGCGME
Ga0066903_1013986342	3300005764	Tropical Forest Soil	MQHRVDDLPIVRCPGCDRPMEATERTSLKERLVDIRYVCAGCGMETKRTIADEAH*
Ga0066903_1017314123	3300005764	Tropical Forest Soil	DPPIVRCPGCDRPMEAKERTSVAERLVDIRYVCDGCGMETQRTVADEAR*
Ga0066903_1017654793	3300005764	Tropical Forest Soil	GSAATAGAWAMQDRVDDAPIVRCPGCDQPMEAKERTPVMDRLVDILYVCAGCGMETKRTVADEAH*
Ga0066903_1031160232	3300005764	Tropical Forest Soil	MQDRVDDPPIVRCPGCDRPMDAKERTSVAGRLVDICYVCAGCGMETKCTVADEAH*
Ga0066903_1062490552	3300005764	Tropical Forest Soil	DPPIVRCPGCDRPMEAKERTSVAERLVDIRYVCDGCGMETKRTVADEAR*
Ga0066903_1077754811	3300005764	Tropical Forest Soil	MGLVMQDRVDDSPVVRCPGCNQPMEAKERPPVKEGLVDIRYVCAGCSMETKRPIADEGH*
Ga0081455_100094827	3300005937	Tabebuia Heterophylla Rhizosphere	MRDRVDDPPIVRCPGCNQPMQAKERTPVKEHLVDIRYVCAGCGMETKRTVAEEAS*
Ga0066696_104062661	3300006032	Soil	MQDRVGDALIVGCPGCDLPMEAKERTSVTEGLVDIRYVYPACGMETKRTVADEAVWCT*
Ga0070712_1002441492	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MLGPMQLRADEIPVVRCPGCQQPMDPKERTSVTDRLVDVRYVCARCGMETKRTVEEEA*
Ga0066665_104939732	3300006796	Soil	SQGWAMQDRVDEPPIVRCPGCNQPMEPKERTSITERLVDIRYVCAVCGMETKRTVKDDKGS*
Ga0075420_1001026311	3300006853	Populus Rhizosphere	QFLGNSKRPCGLPGLAVQDQVNEPPVVRCPGCHQPMEAKERTSVTERLMDIRYVCGTCGMETKRTVAHEL*
Ga0075425_1024818831	3300006854	Populus Rhizosphere	MQDRIEEPPVVRCPGCHHPMQPKERTSATERLVDIRYVCATCGMETKRTVAEERVKPTG*
Ga0075424_1024680341	3300006904	Populus Rhizosphere	MQDRVDDPPVVRCPGCNQPMEAKERTSIKEGLVDICYVCAGCGMETKRPIADEGH*
Ga0099793_102537751	3300007258	Vadose Zone Soil	MQDRVDDPPIVRCPGCDRPMEAKERTSVAERLVDNRYVCAGCGMETKRTVADEAR*
Ga0066710_1020682261	3300009012	Grasslands Soil	MQDRVDEPPIVRCPGCNQPMEPKERTSITERLVDIRYVCAVCGMETKRTVKDDKGS
Ga0111539_122852741	3300009094	Populus Rhizosphere	GGADAMQDRVDEPPVVRCPGCHHPMQPKERTSATERLVDIRYVCATCGMETKRTVAEESLKPTG*
Ga0066709_1018338361	3300009137	Grasslands Soil	AWAMQDRVDDPPIVRCPGCDQPMEAKERTPVMGRLVDIRYVCAGCGTETKRIVADEAH*
Ga0126380_113565101	3300010043	Tropical Forest Soil	MQDRVNDPPIVRCPGCDRPMEAKERTSVAERPVDIRYVCDGCGMETKRTVADEAR*
Ga0126384_116963072	3300010046	Tropical Forest Soil	MQQLPGAWDMQHRVDDSPIVRCPGCDQPMEAKERMPVAVRLVDIRYVCAGCGMETKRTVADEAL*
Ga0126382_111300272	3300010047	Tropical Forest Soil	MQDRVDEPPVVRCPGCNQPMEAKERTPKEGLVDIRYVCAGCGMETKRTIADEAH*
Ga0134109_104754931	3300010320	Grasslands Soil	MQDHVDDPPIVRCPGCDQPMEAKERTPVEERLVDIRYVCAGCGMETKRTVADEAVWCT*
Ga0126370_102705012	3300010358	Tropical Forest Soil	MQDRVDDPPIVRCPGCDQPMEAKERTPVMEHLVDILYVCAGCGMETKRTVADEAH*
Ga0126376_100760562	3300010359	Tropical Forest Soil	MQDRVDDPPIVRCPGCDQPMEAKKRTPVMEHLVDILYVCAWCGMETKRTVADEAH*
Ga0126376_101537473	3300010359	Tropical Forest Soil	MGLVMQDRVDDSPVVRCPGCNQPMEAKERTPVKEGLVDIRYVCAGCGMETKRPIADEGH*
Ga0126376_106128851	3300010359	Tropical Forest Soil	MQDRVDDPPIVRCPGCNHPMEAQERTPVKEGLVAIRYVCAVCGMETKRSIADEGH*
Ga0126378_124840871	3300010361	Tropical Forest Soil	MQDRVGDPPVVRCPGCNQPMEARERTPVKEGLVDIRYVCAGCGMETKRPIADEAH*
Ga0126379_102344192	3300010366	Tropical Forest Soil	VQDRMDDPPIVRCPGCDRPMEAKERTSVAERLVDIRYVCDGCGMETQRTVADEAR*
Ga0126381_1000794486	3300010376	Tropical Forest Soil	MQDRVDDPPIVRCPGCYQPMEAKKRTPVMEHLVDILYVCAWCGMETKRTVADEAH*
Ga0126381_1019926101	3300010376	Tropical Forest Soil	MQDRVGDPPVVRCPGCNQSMEARERTPVKEGLVDIRYVCAGCGMETKRPIADEAH*
Ga0126381_1024698072	3300010376	Tropical Forest Soil	VQDRMDDPPIVRCPGCDRPMEAKERTSVAERLVDIRYVCDGCGMETKRTVADEAR*
Ga0126381_1031622651	3300010376	Tropical Forest Soil	MQDRVDDPPIVQCPGCNQPMEAKERTPVKEGLVDIRYVCAGRGTETKRTIADEAY*
Ga0126383_132692551	3300010398	Tropical Forest Soil	TAWGLSYARVDDPPVVLCPGCNQPMEAKERTPVKEGLVDIRYVCAGRGTETKRTIADEAY
Ga0126383_133707861	3300010398	Tropical Forest Soil	MQLRVDEIPVVRCPGCQQPMDPKDRTSVTDRLVDIRYACMETKRTVKEVVTGHSPGALR
Ga0137391_115803321	3300011270	Vadose Zone Soil	MQDRVNDPPIVRCPGCDRPMEAKERTSVAERLVDIRYVCTGCGMETKRTVADEAR*
Ga0137388_118632081	3300012189	Vadose Zone Soil	MQDRVDEPPIVRCPGCNQPMEPKERTSITERLVDIRYVCAVCGMETKRTVKDDKGS*
Ga0137364_108406722	3300012198	Vadose Zone Soil	MHDRVDDPPIVRCPGCNQPMEAKERTSVNQRLVDIRYVCAGCGMETKRTVADEAH*
Ga0137364_109334902	3300012198	Vadose Zone Soil	MQDRADEPPIVRCPGCDQPMQAKERTPVTERLVDIRYVCAGCGMETKRTVADEAR*
Ga0137383_102389211	3300012199	Vadose Zone Soil	MQDRVDEPPIVRCPGCDQPMEAKERTSLKERLVDIRYVCAGCGMETKRTIADEAR*
Ga0137383_105956242	3300012199	Vadose Zone Soil	MQDRVDDPPIVRCPGCDLPMEAKERTSVTEALVDIRYVCPACGMETKRTVAR*
Ga0137365_108170951	3300012201	Vadose Zone Soil	AATAGAWDMQDRVDDPPIVRCPGCDLPMEAKERTPVAERLVDIRYVCAGCGMETKRTIADEAH*
Ga0137363_101195914	3300012202	Vadose Zone Soil	MQDRVDDPPIVRCPGCDRPMEAKERTSVAERLVDIRYVCAGCGMDTKRTVADEAR*
Ga0137363_102399282	3300012202	Vadose Zone Soil	MQDRVDEPPIVLCPGCDQPMEAKERTPVMERLVDIRYVCAGCGMETKRTIADEAL*
Ga0137374_101886352	3300012204	Vadose Zone Soil	MQLRVDESPIVQCPGCHQPMDPKDRKPVTPSGRLVDIRYVCPACGMETKRTVGEG*
Ga0137378_100809746	3300012210	Vadose Zone Soil	MQDRVDERPIVRCPGCNQPMEAKERTSVTERLVDIRYVCAACGMETKRTVAEEA*
Ga0137377_106581412	3300012211	Vadose Zone Soil	MQDRVDDPPIVRCPGCDRPMEAKERTSVAERLVDIRYVCAGCGMETKRTVADEAR*
Ga0137360_100554212	3300012361	Vadose Zone Soil	MQDRVDEPPIVLCPGCDQPMKAKERTPVMERLVDIRYVCAGCGMETKRTIADEAL*
Ga0137360_106756191	3300012361	Vadose Zone Soil	PIVRCPGCNQPMEPKERTSITERLVDIRYVCAVCGMETKRTVKDDKGS*
Ga0137361_102034002	3300012362	Vadose Zone Soil	MQDRVDEPPIVLCPGCDQPMEAKERTPVMERLVDIRYVCAGCGMETKRTIEDEAL*
Ga0137361_111236022	3300012362	Vadose Zone Soil	GWAMQDRVDEPPIVRCPGCNQPMEPKERTSISERLVDIRYVCAVCGMETKRTVKDDKGS*
Ga0137395_100348305	3300012917	Vadose Zone Soil	VDDPPIVRCPGCDRPMEAKERTSVAERLVDIRYVCAGCGMETKRTVADEAR*
Ga0137395_101525275	3300012917	Vadose Zone Soil	VDDPPIVRCPGCDRPMEAKERTSVAERLVDIRYVCAGCGMDTKRTVADEAR*
Ga0137413_111339611	3300012924	Vadose Zone Soil	MQDRVEEPSVVQCPGCHRPMDAQERAFVTDRLVDIRYVCATCGMETKRTVADEVQKRG*
Ga0126375_108507291	3300012948	Tropical Forest Soil	MQDRVDDPPVVRCPGCNQPMEAKERTPVKEGLVDIRYVCAGCGMETKRPIADEAH*
Ga0126375_115229541	3300012948	Tropical Forest Soil	GQSTTAVGLVMQDRVDDPPIVQCPGCNQPMEAKERTPVKEGLVDIRYVCAGCGMETKRPIADEGH*
Ga0134077_103853601	3300012972	Grasslands Soil	GTIRKCGGAGYAGSNGCPAFVRCPGCNQPMEAKERTPVKEGLVDIRYVCAGCGMETRRPITDEAH*
Ga0134110_100792872	3300012975	Grasslands Soil	MQDRVDDPPIVRCPGCDLPMEAKERTSVTEGLVDIRYVCPACGMETKRTVADEAVWCT*
Ga0134087_100488241	3300012977	Grasslands Soil	ATAGAWAMQDRVGDAPIVGCPGCDLPMEAKERTSVTEGLVDIRYVYPACGMETKRTVADEAVWCT*
Ga0134081_100798443	3300014150	Grasslands Soil	MQDHVDDPPIVRCPGCDQPMEAKGRTPVEEHLVDIRYVCAGCGMETKRTVADEAD*
Ga0182036_103597132	3300016270	Soil	MQDRVDNPPIVRCPGCDQPMEAKERTPVMEHLVDILYVCAGCGMETKRTVADEAH
Ga0182036_108845331	3300016270	Soil	CGGAWVMQDPVDDPPVVRCPGCNQPMEAKERTPVTEGLVDIRYVCAGCGMETKRTIADEA
Ga0182041_104161072	3300016294	Soil	GAWVMQDPVDDPPVVRCPGCNQPMEAKERTPVKEGLVDIRYVCAGRGTETKRTIADEAY
Ga0182032_108765542	3300016357	Soil	MQDRVDDLPIVRCPGCDRPMEARERTSLKERLVDIRYVCAGCGMETKRTIADEAH
Ga0182040_102882891	3300016387	Soil	MQDQVDDPPVVLCPGCNQWMEAKERTPVEERLVDIRYACAGCGMETKRTVADD
Ga0182040_106098172	3300016387	Soil	DPPIVRCPGCDQPMEAKERTPVMEHLVDILYVCAGCGMETKRTVADEAH
Ga0182040_119528601	3300016387	Soil	RRREEIHLRGQSAAAVGLVMQDRVDGPPVVRCPGCNQPMAAKERTPVKEGLVDIRYVCAGCGMETKRPIADEAH
Ga0182038_119859902	3300016445	Soil	MSRLSFRCPGCDQPMEAKERTSLKERLVDIRYVCAGCGMETKRPIADEAH
Ga0184608_100557541	3300018028	Groundwater Sediment	MRDRVDEPPVVRCPGCQHPMMPMERTSAAERLVDIRYVCMTCGMETKRTIAEEP
Ga0184611_11762102	3300018067	Groundwater Sediment	PVVRCPGCHHPMQPKERTSATERLVDIRYVCATCGMETKRTVAEESLKPTG
Ga0184635_101441251	3300018072	Groundwater Sediment	MQDRVEEPSIVQCPGCHRPMDAQERIFVTDRLVDIRYVCATCAMETKRTVAEEVQKRP
Ga0066667_100679571	3300018433	Grasslands Soil	MQDRVDEPPIVRCPGCDQPMEAKERTSLKERLVDIRYVCAGCGMETKRTVADETR
Ga0066667_110717881	3300018433	Grasslands Soil	MQDRVDDPPIVRCPGCDQPMEAKERTPVMERLVDIRYVCAGCGTETKRIVADEAH
Ga0066669_111218561	3300018482	Grasslands Soil	MQDRVGDAPIVGCPGCDLPMEAKERTSVTEGLVDIRYVCPACGMETKRTVADEA
Ga0126371_104357653	3300021560	Tropical Forest Soil	MQDPVDDPPVVRCPGCNQPMEAKERTPVKEGLVDIRYVCAGRGTETKRTIADEAY
Ga0126371_114018111	3300021560	Tropical Forest Soil	MQDRVGDPPVVRCPGCNQPMEARERTPVKEGLVDIRYVCAGCGMETKRPIADEAH
Ga0126371_117689232	3300021560	Tropical Forest Soil	MQDRVDDAPIVRCPGCDQPMEAKERTPIMDRLVDILYVCAGCGMETKRTVADEAH
Ga0209468_10442762	3300026306	Soil	MQDRVGDAPIVGCPGCDLPMEAKERTSVTEGLVDIRYVCPACGMETKRTVADEAVWCT
Ga0209265_12140561	3300026308	Soil	MQDRVDDPPIVRCPGCDLPMEAKERTSVTEALVDIRYVCPACGMETKRTVADEAVWCT
Ga0209154_12942851	3300026317	Soil	MQDRADESPIVRCPGCDQPMEAKERTSLKERLVDIRYVCAGCGMETKRTVADAR
Ga0257180_10592101	3300026354	Soil	MQDRVNDPPIVRCPGCDRPMEAKERTSVAERLVDIRYVCAGCGMDTKRTVADEAR
Ga0257159_10129571	3300026494	Soil	HFGAADAATAGAWTMQDRVNDPPIVRCPGCDRPMEAKERTSVAERLVDIRYVCAGCGMDTKRTVADEAR
Ga0209376_13662761	3300026540	Soil	MQDRVGDALIVGCPGCDLPMEAKERTSVTEGLVDIRYVYPACGMETKRTVADEAVWCT
Ga0209161_105592951	3300026548	Soil	ETTAGGAWAMQDRVDDPPIVRCPGCDQPMEAKERTPVMGRLVDIRYVCAGCGTETKRIVADEAH
Ga0209622_10153143	3300027502	Forest Soil	MQDRVDDPPIVRCPGCDQSMEAKERTPAAERLVDIRYVCAGCGMETKRTIADEAR
Ga0209799_10251613	3300027654	Tropical Forest Soil	MQDRVDDPPVVRCPGCNQPMEAKERTPVKEGLVDIRYVCAGCGMETKRPIADEGH
Ga0209689_13964521	3300027748	Soil	MQDRVDDPPIVRCPGCDLPMEAKERTSVTEGLVDIRYVCPACGMETKRTVAR
Ga0307316_100783093	3300028755	Soil	MSDRVDEPPVVRCPGCQHPMQPKERTSATERLVDIRYVCMTCGMETKRTVAEEA
Ga0307299_100369401	3300028793	Soil	WLRLARGADAMSDRVDEPPVVRCPGCQHPMQPKERTSATERLVDIRYVCMTCGMETKRTVAEEA
Ga0307292_101136543	3300028811	Soil	RGADAMSDRVDEPPVVRCPGCQHPMQPKERTSATERLVDIRYVCMTCGMETKRTVAEEA
Ga0307296_100702711	3300028819	Soil	MRDRVDEPPVVRCPGCHSPMQPKERTSATERLVDIRYVCTTCGMQTKRTVAEEA
Ga0307312_110282981	3300028828	Soil	MKDHLKEGAIVQCPGCHLPMAAQERTLVTERLVDIRYVCATCGMETKRTVAEEAQKQA
Ga0307278_101109302	3300028878	Soil	MQDRVEEPGVVQCPGCYRPMDAQERAFVTDRLVDIRYVCATCGMETKRTVADEVQKRG
Ga0307501_100294461	3300031152	Soil	MQDRVEEPSVVQCPGCHRPMDAQERTLVTVRLVDIRYVCATCCMETKRTVTEEMQKRG
Ga0170824_1123430291	3300031231	Forest Soil	DPPIVRCPGCDRPMEAKERTSVAERLVDIRYVCAGCGMDTKRTVADEAR
Ga0318534_101985161	3300031544	Soil	LRGQSAAAVGLVMQDRVDGPPVVRCPGCNQPMAAKERTPVKEGLVDIRYVCAGCGMETKRPIADEAH
Ga0318541_106706621	3300031545	Soil	IVRCPGCDQPMEAKERTPVIERLVDIRYVCVACGMETKRTIAEAH
Ga0318538_107423522	3300031546	Soil	MQDRVDGPPVVRCPGCNQPMAAKERTPVKEGLVDIRYVCAGCGMETKRPIADEAH
Ga0318528_102074801	3300031561	Soil	MQDRVDDPPIVRCPGCDQPMEAKERTPVMEHLVDILYVCAGCGMETKRTVADEAH
Ga0318515_100221894	3300031572	Soil	VGLVMQDRVDGPPVVRCPGCNQPMAAKERTPVKEGLVDIRYVCAGCGMETKRPIADEAH
Ga0318515_107050981	3300031572	Soil	QSIWRAQAATAGGGWDMQDRVDNPPIVRCPGCDQPMEAKERTPVMEYLVDILYVCAGCGMETKRTVADEAH
Ga0310915_100243911	3300031573	Soil	VRCPGCDQPMEAKERTPVIERLVDIRYVCAACGMETKRTVADDTQINRTS
Ga0310915_102114472	3300031573	Soil	MQDRLDDPPVVRCPGCNQPMEAKERTPVKESLVDIRYVCAGCGTETKRTIADEAH
Ga0310915_102429682	3300031573	Soil	VDDPPVVRCPGCNQPMEAKERTPVKESLVDIRYVCAGCGTETKRTIADEAH
Ga0318542_103360542	3300031668	Soil	MQDRVDDPPIVRCPGCDQPMEAKERTPVIERLVDIRYVCVACGMETKRTIAEAH
Ga0318572_103481703	3300031681	Soil	EEIHLRGQSAAAVGLVMQDRVDGPPVVRCPGCNQPMAAKERTPVKEGLVDIRYVCAGCGMETKRPIADEAH
Ga0318496_104230992	3300031713	Soil	WDMQDRVDDPPIVRCPGCDQPMEAKERTPVIERLVDIRYVCVACGMETKRTIAEAH
Ga0318501_106930351	3300031736	Soil	TTQRGNLFKGSISNCGGAWVMQDPVDDPPVVRCPGCNQPMEAKERTPVKEGLVDIRYVCAGRGTETKRTIADEAY
Ga0318494_104713021	3300031751	Soil	MQDRVDDPPVVLCPGCNQPMEAKERTPVEERLVDIRYACAGCGMETKRTVADDTQIN
Ga0318494_108463231	3300031751	Soil	MQDRVDDPPIVRCPGCDQPMEAKERTPVMEHLVDILYVCAGCGMET
Ga0318546_111524901	3300031771	Soil	GGWDMQDRVDDPPIVRCPGCDQPMEAKERTPVMEHLVDILYVCAGCGMETKRTVADEAH
Ga0310917_101198502	3300031833	Soil	MQDRVDDPPVVLCPGCNQPMEAKERTPVEERLVDIRYACAGCGMETKRTVADDTQINRTS
Ga0318495_103856162	3300031860	Soil	PREEIHLRGQSAAAVGLVMQDRVDGPPVVRCPGCNQPMEAKERTPVKEGLVDIRYVCAGCGMETKRPIADEAH
Ga0306919_104154962	3300031879	Soil	MQDPVDDPPVVRCPGCNQPMEAKERTPVKESLVDIRYVCAGCGTETKRTIADEAH
Ga0318544_100298696	3300031880	Soil	MQDRVDDPPVVRCPAVNQPMEAKERTPVKEGLVDIRYVCAGCGMETKRP
Ga0318522_102061141	3300031894	Soil	MQDRVDDPPVVRCPAVNQPMEAKERTPVKEGLVDIRYVCAGCGMETKRPIADEAH
Ga0306923_119568822	3300031910	Soil	MQDRVDDPPIVRCPGCDQPMEAKERTPVIERLVDIRYVCVACGMET
Ga0306921_104066331	3300031912	Soil	NCGGAWVMQDPVDDPPVVRCPGCNQPMEAKERTPVKEGLVDIRYVCAGRGTETKRTIADEAY
Ga0306921_124959851	3300031912	Soil	LRGQSAAAVGLVMQDRVDGPPVVRCPGCNQPMEAKERTPVKEGLVDIRYVCAGCGMETKRPIADEAH
Ga0310912_110151181	3300031941	Soil	MQDPVDDPPVVRCPGCNQPMEAKERTPVKEGLVDIRYVCAGRGTETKRTIADE
Ga0310916_103068401	3300031942	Soil	DPPIVRCPGCDQPMEAKERTPVIERLVDIRYVCVACGMETKRTIAEAH
Ga0310916_114584282	3300031942	Soil	MQDRVDDPPIVRCPGCDQPMEAKERTPVIERLVDIRYVCVACGME
Ga0310913_101535943	3300031945	Soil	MQDRVDDPPIVRCPGCDQPMEAKERTPVIERLVDIRYVCAACGMETKRTVAEAH
Ga0310913_103342142	3300031945	Soil	MQDRVDDPPVVLCPGCNQPMQAKERTPVEERLVDIRYACAGCGMETKRTVADDTQINRTS
Ga0310909_101866063	3300031947	Soil	VMQDPVDDPPVVRCPGCNQPMEAKERTPVKESLVDIRYVCAGCGTETKRTIADEAH
Ga0306926_111848722	3300031954	Soil	PPIVRCPGCDQPMEAKERTPVIERLVDIRYVCAACGMETKRTVAEAH
Ga0306922_100040181	3300032001	Soil	VDDPPVVLCPGCNQPMEAKERTPVEERLVDIRYACAGCGMETKRTVADDTQINRTS
Ga0318562_104268913	3300032008	Soil	GQSAAAVGLVMQDRVDGPPVVRCPGCNQPMAAKERTPVKEGLVDIRYVCAGCGMETKRPIADEAH
Ga0310911_103330201	3300032035	Soil	MQDRVDDPPVVLCPGCNQWMEAKERTPVEERLVDIRYACAGCGMETKRTVADDTQINRTS
Ga0318559_104043701	3300032039	Soil	AAVGLVMQDRVDGPPVVRCPGCNQPMAAKERTPVKEGLVDIRYVCAGCGMETKRPIADEA
Ga0318545_101391211	3300032042	Soil	GQSAAAVGLVMQDRVDGPPVVRCPGCNQPMEAKERTPVKEGLVDIRYVCAGCGMETKRPIADEAH
Ga0318505_101937281	3300032060	Soil	QDRVDDPPIVRCPGCDQPMEAKERTPVIERLVDIRYVCVACGMETKRTIAEAH
Ga0318504_100897945	3300032063	Soil	DMQDRVDNPPIVRCPGCDQPMEAKERTPVMEHLVDILYVCAGCGMETKRTVADEAH
Ga0318510_100689581	3300032064	Soil	REEIHLRGQSAAAVGLVMQDRVDGPPVVRCPGCNQPMAAKERTPVKEGLVDIRYVCAGCGMETKRPIADEAH
Ga0306920_1004441132	3300032261	Soil	MQDPVDDPPVVRCPGCNQPMEAKERTPVKEGLVDIRCVCAGRGTETKRTIADEAY

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F034275

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences