Metagenome / Metatranscriptome Family F034279

Basic Information
Family ID	F034279
Family Type	Metagenome / Metatranscriptome
Number of Sequences	175
Average Sequence Length	39 residues
Representative Sequence	SRSDVDRAREAGAAGYVTKDRIAAELIEAIVEVAPR
Number of Associated Samples	157
Number of Associated Scaffolds	175

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	3.49 %
% of genes near scaffold ends (potentially truncated)	92.57 %
% of genes from short scaffolds (< 2000 bps)	93.14 %
Associated GOLD sequencing projects	154
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.47

Most Common Taxonomy
Group	Bacteria (85.714 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (14.857 % of family members)
Environment Ontology (ENVO)	Unclassified (28.571 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.286 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.00% β-sheet: 0.00% Coil/Unstructured: 50.00%
Feature Viewer

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Pfam ID	Name	% Frequency in 175 Family Scaffolds
PF03840	SecG	82.29
PF01726	LexA_DNA_bind	5.71
PF01523	PmbA_TldD	1.71
PF00072	Response_reg	1.14
PF15515	MvaI_BcnI	0.57
PF13302	Acetyltransf_3	0.57
PF01609	DDE_Tnp_1	0.57
PF13384	HTH_23	0.57
PF06762	LMF1	0.57
PF00534	Glycos_transf_1	0.57
PF10400	Vir_act_alpha_C	0.57
PF04075	F420H2_quin_red	0.57
PF12681	Glyoxalase_2	0.57
PF00903	Glyoxalase	0.57
PF01872	RibD_C	0.57

COG ID	Name	Functional Category	% Frequency in 175 Family Scaffolds
COG1314	Protein translocase subunit SecG	Intracellular trafficking, secretion, and vesicular transport [U]	82.29
COG0312	Zn-dependent protease PmbA/TldA or its inactivated homolog	General function prediction only [R]	1.71
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.57
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.57
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.57
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.57
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.57
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.57
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.57
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.57

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	85.71 %
Unclassified	root	N/A	14.29 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	85.71 %
Unclassified	root	N/A	14.29 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	85.71 %
Unclassified	root	N/A	14.29 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	64.00 %
Unclassified	root	N/A	14.29 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	63.43 %
Unclassified	root	N/A	14.29 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	29.14 %
Unclassified	root	N/A	14.29 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	11.43 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	29.14 %
Unclassified	root	N/A	14.29 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	10.29 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	29.14 %
Unclassified	root	N/A	14.29 %
Conexibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae	2.86 %
unclassified Solirubrobacterales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales	0.57 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	29.14 %
Unclassified	root	N/A	14.29 %
Conexibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	2.86 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	0.57 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	29.14 %
Unclassified	root	N/A	14.29 %
Conexibacter woesei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	2.86 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	0.57 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459005\|F1BAP7Q02IV4V2	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	515	Open in IMG/M
3300000890\|JGI11643J12802_11883053	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	617	Open in IMG/M
3300000891\|JGI10214J12806_11183544	All Organisms → cellular organisms → Bacteria	780	Open in IMG/M
3300001867\|JGI12627J18819_10210950	All Organisms → cellular organisms → Bacteria	783	Open in IMG/M
3300002066\|JGIcombinedJ21911_10111601	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	803	Open in IMG/M
3300002075\|JGI24738J21930_10140943	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	532	Open in IMG/M
3300002076\|JGI24749J21850_1066352	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300004633\|Ga0066395_10317322	All Organisms → cellular organisms → Bacteria	857	Open in IMG/M
3300005093\|Ga0062594_103170343	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	515	Open in IMG/M
3300005345\|Ga0070692_10234684	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1091	Open in IMG/M
3300005444\|Ga0070694_100847783	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	752	Open in IMG/M
3300005518\|Ga0070699_100855106	All Organisms → cellular organisms → Bacteria	833	Open in IMG/M
3300005543\|Ga0070672_100148201	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1940	Open in IMG/M
3300005546\|Ga0070696_100703939	All Organisms → cellular organisms → Bacteria	824	Open in IMG/M
3300005547\|Ga0070693_101063644	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	615	Open in IMG/M
3300005559\|Ga0066700_10519082	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	831	Open in IMG/M
3300005566\|Ga0066693_10394066	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	562	Open in IMG/M
3300005568\|Ga0066703_10461593	All Organisms → cellular organisms → Bacteria	760	Open in IMG/M
3300005575\|Ga0066702_10589570	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	668	Open in IMG/M
3300005578\|Ga0068854_101743311	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	570	Open in IMG/M
3300005586\|Ga0066691_10892392	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300005598\|Ga0066706_11037334	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	630	Open in IMG/M
3300005719\|Ga0068861_100868220	All Organisms → cellular organisms → Bacteria	852	Open in IMG/M
3300005764\|Ga0066903_105352363	All Organisms → cellular organisms → Bacteria	678	Open in IMG/M
3300005886\|Ga0075286_1069284	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	515	Open in IMG/M
3300005889\|Ga0075290_1034829	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	660	Open in IMG/M
3300005893\|Ga0075278_1013201	All Organisms → cellular organisms → Bacteria	1087	Open in IMG/M
3300005896\|Ga0075282_1006568	All Organisms → cellular organisms → Bacteria	1324	Open in IMG/M
3300006046\|Ga0066652_100691371	All Organisms → cellular organisms → Bacteria	970	Open in IMG/M
3300006046\|Ga0066652_100772107	All Organisms → cellular organisms → Bacteria	918	Open in IMG/M
3300006046\|Ga0066652_101919041	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	531	Open in IMG/M
3300006049\|Ga0075417_10529352	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300006175\|Ga0070712_100140361	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1843	Open in IMG/M
3300006175\|Ga0070712_101288202	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	637	Open in IMG/M
3300006574\|Ga0074056_11313831	All Organisms → cellular organisms → Bacteria	725	Open in IMG/M
3300006575\|Ga0074053_11543257	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	519	Open in IMG/M
3300006791\|Ga0066653_10139251	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1165	Open in IMG/M
3300006794\|Ga0066658_10115401	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1300	Open in IMG/M
3300006794\|Ga0066658_10932713	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	502	Open in IMG/M
3300006796\|Ga0066665_11345060	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	550	Open in IMG/M
3300006806\|Ga0079220_12154624	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	500	Open in IMG/M
3300006844\|Ga0075428_101401914	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	733	Open in IMG/M
3300006847\|Ga0075431_100145252	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2445	Open in IMG/M
3300006871\|Ga0075434_102262685	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	547	Open in IMG/M
3300006894\|Ga0079215_11615162	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300006903\|Ga0075426_10926769	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	657	Open in IMG/M
3300006914\|Ga0075436_100983675	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	633	Open in IMG/M
3300009012\|Ga0066710_102409133	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	763	Open in IMG/M
3300009094\|Ga0111539_12462071	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	604	Open in IMG/M
3300009148\|Ga0105243_13067895	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	506	Open in IMG/M
3300009176\|Ga0105242_12010716	Not Available	620	Open in IMG/M
3300009792\|Ga0126374_11029419	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300009840\|Ga0126313_10405284	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1082	Open in IMG/M
3300010041\|Ga0126312_10628133	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	773	Open in IMG/M
3300010043\|Ga0126380_12290686	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	501	Open in IMG/M
3300010152\|Ga0126318_10812724	Not Available	552	Open in IMG/M
3300010301\|Ga0134070_10389533	All Organisms → cellular organisms → Bacteria → Terrabacteria group	547	Open in IMG/M
3300010321\|Ga0134067_10445791	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	527	Open in IMG/M
3300010322\|Ga0134084_10230911	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	660	Open in IMG/M
3300010325\|Ga0134064_10074951	Not Available	1076	Open in IMG/M
3300010325\|Ga0134064_10235217	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300010329\|Ga0134111_10142875	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	943	Open in IMG/M
3300010336\|Ga0134071_10667957	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	548	Open in IMG/M
3300010362\|Ga0126377_13018648	Not Available	543	Open in IMG/M
3300010366\|Ga0126379_11834406	All Organisms → cellular organisms → Bacteria	710	Open in IMG/M
3300010375\|Ga0105239_12996446	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	550	Open in IMG/M
3300010375\|Ga0105239_13472287	Not Available	512	Open in IMG/M
3300010399\|Ga0134127_10261201	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1647	Open in IMG/M
3300010400\|Ga0134122_12399078	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	575	Open in IMG/M
3300010401\|Ga0134121_11693811	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	655	Open in IMG/M
3300012014\|Ga0120159_1126834	Not Available	713	Open in IMG/M
3300012200\|Ga0137382_10245758	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1239	Open in IMG/M
3300012200\|Ga0137382_10504075	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	860	Open in IMG/M
3300012204\|Ga0137374_10159752	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1999	Open in IMG/M
3300012204\|Ga0137374_10188654	All Organisms → cellular organisms → Bacteria	1790	Open in IMG/M
3300012209\|Ga0137379_10363538	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1356	Open in IMG/M
3300012210\|Ga0137378_11808213	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	515	Open in IMG/M
3300012211\|Ga0137377_11214648	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	684	Open in IMG/M
3300012211\|Ga0137377_11259996	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	669	Open in IMG/M
3300012212\|Ga0150985_107073061	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	559	Open in IMG/M
3300012212\|Ga0150985_113286454	Not Available	515	Open in IMG/M
3300012285\|Ga0137370_10931750	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	537	Open in IMG/M
3300012349\|Ga0137387_11105445	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	564	Open in IMG/M
3300012350\|Ga0137372_10408921	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1026	Open in IMG/M
3300012355\|Ga0137369_10485632	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	875	Open in IMG/M
3300012356\|Ga0137371_10018208	All Organisms → cellular organisms → Bacteria	5397	Open in IMG/M
3300012360\|Ga0137375_10765528	All Organisms → cellular organisms → Bacteria	780	Open in IMG/M
3300012360\|Ga0137375_11249719	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	565	Open in IMG/M
3300012519\|Ga0157352_1061537	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	586	Open in IMG/M
3300012532\|Ga0137373_10660658	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	783	Open in IMG/M
3300012882\|Ga0157304_1042870	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300012951\|Ga0164300_10025992	All Organisms → cellular organisms → Bacteria	2091	Open in IMG/M
3300012960\|Ga0164301_10514894	Not Available	866	Open in IMG/M
3300012960\|Ga0164301_10515621	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	865	Open in IMG/M
3300012960\|Ga0164301_11440969	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	565	Open in IMG/M
3300012960\|Ga0164301_11875196	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	506	Open in IMG/M
3300012977\|Ga0134087_10151786	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1009	Open in IMG/M
3300012986\|Ga0164304_10581270	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	833	Open in IMG/M
3300012989\|Ga0164305_10019407	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3504	Open in IMG/M
3300013296\|Ga0157374_12377943	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	557	Open in IMG/M
3300013770\|Ga0120123_1040001	All Organisms → cellular organisms → Bacteria	989	Open in IMG/M
3300014254\|Ga0075312_1151994	Not Available	514	Open in IMG/M
3300014325\|Ga0163163_12800978	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	544	Open in IMG/M
3300014326\|Ga0157380_13221561	Not Available	521	Open in IMG/M
3300014501\|Ga0182024_12254165	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	594	Open in IMG/M
3300015077\|Ga0173483_10860973	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300015358\|Ga0134089_10114742	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1042	Open in IMG/M
3300015359\|Ga0134085_10557158	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	529	Open in IMG/M
3300015374\|Ga0132255_102608740	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	772	Open in IMG/M
3300018061\|Ga0184619_10145642	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1080	Open in IMG/M
3300018431\|Ga0066655_10540795	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	777	Open in IMG/M
3300018482\|Ga0066669_11310527	Not Available	655	Open in IMG/M
3300019767\|Ga0190267_11075906	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	574	Open in IMG/M
3300020170\|Ga0179594_10160508	All Organisms → cellular organisms → Bacteria	834	Open in IMG/M
3300021080\|Ga0210382_10334927	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	667	Open in IMG/M
3300022467\|Ga0224712_10668017	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	510	Open in IMG/M
3300023168\|Ga0247748_1087125	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	505	Open in IMG/M
3300024219\|Ga0247665_1059765	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	541	Open in IMG/M
3300024232\|Ga0247664_1142317	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	562	Open in IMG/M
3300024251\|Ga0247679_1027363	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	963	Open in IMG/M
3300025329\|Ga0209072_100505	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	575	Open in IMG/M
3300025903\|Ga0207680_10878872	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	643	Open in IMG/M
3300025903\|Ga0207680_11233080	Not Available	533	Open in IMG/M
3300025910\|Ga0207684_10827764	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	781	Open in IMG/M
3300025921\|Ga0207652_11805154	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	517	Open in IMG/M
3300025928\|Ga0207700_10781642	All Organisms → cellular organisms → Bacteria	854	Open in IMG/M
3300025931\|Ga0207644_11550993	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	556	Open in IMG/M
3300025937\|Ga0207669_10116985	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1800	Open in IMG/M
3300025960\|Ga0207651_10237787	All Organisms → cellular organisms → Bacteria	1483	Open in IMG/M
3300025972\|Ga0207668_10390679	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1174	Open in IMG/M
3300025981\|Ga0207640_11675601	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	574	Open in IMG/M
3300026008\|Ga0208529_1019746	Not Available	632	Open in IMG/M
3300026014\|Ga0208776_1024808	Not Available	515	Open in IMG/M
3300026116\|Ga0207674_11515397	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	640	Open in IMG/M
3300026121\|Ga0207683_10748240	All Organisms → cellular organisms → Bacteria	907	Open in IMG/M
3300026298\|Ga0209236_1221712	Not Available	660	Open in IMG/M
3300026327\|Ga0209266_1206230	All Organisms → cellular organisms → Bacteria	705	Open in IMG/M
3300026343\|Ga0209159_1264969	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	523	Open in IMG/M
3300026524\|Ga0209690_1189228	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	668	Open in IMG/M
3300026542\|Ga0209805_1332323	Not Available	577	Open in IMG/M
3300027882\|Ga0209590_10130909	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1536	Open in IMG/M
3300028145\|Ga0247663_1092569	Not Available	547	Open in IMG/M
3300028563\|Ga0265319_1049462	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1392	Open in IMG/M
3300028589\|Ga0247818_10242011	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1191	Open in IMG/M
3300028714\|Ga0307309_10002274	All Organisms → cellular organisms → Bacteria	2907	Open in IMG/M
3300028720\|Ga0307317_10259570	Not Available	587	Open in IMG/M
3300028754\|Ga0307297_10013469	All Organisms → cellular organisms → Bacteria	2204	Open in IMG/M
3300028754\|Ga0307297_10309950	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	571	Open in IMG/M
3300028778\|Ga0307288_10296334	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	643	Open in IMG/M
3300028787\|Ga0307323_10077110	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1187	Open in IMG/M
3300028799\|Ga0307284_10218401	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	752	Open in IMG/M
3300028810\|Ga0307294_10045453	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1261	Open in IMG/M
3300028812\|Ga0247825_10526540	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	843	Open in IMG/M
3300028814\|Ga0307302_10252402	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	864	Open in IMG/M
3300028814\|Ga0307302_10321845	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	761	Open in IMG/M
3300028876\|Ga0307286_10003539	All Organisms → cellular organisms → Bacteria	4611	Open in IMG/M
3300028876\|Ga0307286_10044244	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1498	Open in IMG/M
3300028878\|Ga0307278_10074421	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1531	Open in IMG/M
3300029957\|Ga0265324_10268509	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	580	Open in IMG/M
3300031226\|Ga0307497_10009932	All Organisms → cellular organisms → Bacteria	2672	Open in IMG/M
3300031421\|Ga0308194_10234720	All Organisms → cellular organisms → Bacteria	608	Open in IMG/M
3300031670\|Ga0307374_10127522	All Organisms → cellular organisms → Bacteria	2070	Open in IMG/M
3300031672\|Ga0307373_10332090	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	937	Open in IMG/M
3300031893\|Ga0318536_10374627	Not Available	720	Open in IMG/M
3300031954\|Ga0306926_11512719	Not Available	774	Open in IMG/M
3300031995\|Ga0307409_102070672	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	599	Open in IMG/M
3300031996\|Ga0308176_12142669	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	597	Open in IMG/M
3300032001\|Ga0306922_12072037	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	552	Open in IMG/M
3300032090\|Ga0318518_10622475	Not Available	550	Open in IMG/M
3300032174\|Ga0307470_11926179	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	504	Open in IMG/M
3300032421\|Ga0310812_10393372	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	623	Open in IMG/M
3300033233\|Ga0334722_10281288	Not Available	1216	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	80.00%
Host-Associated	Host-Associated	20.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	77.71%
Plants	Host-Associated → Plants	20.00%
Aquatic	Environmental → Aquatic	2.29%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	77.71%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.14%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.29%
Freshwater	Environmental → Aquatic → Freshwater	1.71%
Sediment	Environmental → Aquatic → Sediment	0.57%
Roots	Host-Associated → Plants → Roots	0.57%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	64.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.00%
Loam	Environmental → Terrestrial → Soil → Loam	7.43%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.14%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.57%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.71%
Clay	Environmental → Terrestrial → Soil → Clay	1.14%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.57%
Lake	Environmental → Aquatic → Freshwater → Lake	0.57%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.57%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.57%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.57%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.57%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	39.43%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	13.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.00%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.71%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.14%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.14%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.00%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.29%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.29%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.71%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.71%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	1.14%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.57%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.57%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.57%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.57%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.57%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.57%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.57%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	14.86%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	10.86%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	5.71%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.14%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.43%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	3.43%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.86%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.29%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.29%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.29%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.14%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.14%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.14%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.14%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	1.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.14%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.14%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	1.14%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.14%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.14%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.14%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.14%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.14%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.14%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.57%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.57%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.57%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.57%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.57%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.57%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.57%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.57%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.57%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.57%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.57%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.57%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.57%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.57%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.57%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.57%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.57%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.57%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.57%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459005	Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cm	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002066	Barrow Graham LP Ref core NGADG0002-211 (Barrow Graham LP Ref core NGADG0002-211,NGADG0004-311, ASSEMBLY_DATE=20131004)	Environmental	Open in IMG/M
3300002075	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4	Host-Associated	Open in IMG/M
3300002076	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3	Host-Associated	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005886	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_205	Environmental	Open in IMG/M
3300005889	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_201	Environmental	Open in IMG/M
3300005893	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_0N_202	Environmental	Open in IMG/M
3300005896	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_80N_204	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006574	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006575	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010152	Soil microbial communities from Oklahoma, USA to study soil gas exchange rates - GP-OK-ARM metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012014	Permafrost microbial communities from Nunavut, Canada - A10_80cm_6M	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012519	Unplanted soil (control) microbial communities from North Carolina - M.Soil.7.yng.070610	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012882	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013770	Permafrost microbial communities from Nunavut, Canada - A15_5cm_18M	Environmental	Open in IMG/M
3300014254	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailB_D2	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300022467	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300023168	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S064-202C-5	Environmental	Open in IMG/M
3300024219	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK06	Environmental	Open in IMG/M
3300024232	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK05	Environmental	Open in IMG/M
3300024251	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK20	Environmental	Open in IMG/M
3300025329	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-G (SPAdes)	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026008	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_0N_202 (SPAdes)	Environmental	Open in IMG/M
3300026014	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_205 (SPAdes)	Environmental	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028145	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK04	Environmental	Open in IMG/M
3300028563	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG	Host-Associated	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300028714	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_196	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028754	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028810	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300029957	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG	Host-Associated	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031670	Soil microbial communities from Risofladan, Vaasa, Finland - OX-3	Environmental	Open in IMG/M
3300031672	Soil microbial communities from Risofladan, Vaasa, Finland - OX-2	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M
3300033233	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_bottom	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E41_11714680	2170459005	Grass Soil	SNARADVDRAREAGAAGYLTKDRVAAELISAIVEVAAR
JGI11643J12802_118830532	3300000890	Soil	RTDVARARDAGAAAYVTKDRIAAHLIDAIRELAA*
JGI10214J12806_111835441	3300000891	Soil	AADVDRARDAGAAGYVTKDRIASQLVEAIVEAAGR*
JGI12627J18819_102109501	3300001867	Forest Soil	GSNLRGDVDRARKAGAAGYVTKDRIAAELVDAILKVAPS*
JGIcombinedJ21911_101116011	3300002066	Arctic Peat Soil	SSRADVDLAREAGAAGYVTKDRIAAELIAAIVEIATT*
JGI24738J21930_101409431	3300002075	Corn Rhizosphere	GSNARADVARARDAGAAAYVTKDRIAAQLVDAIRELAVG*
JGI24749J21850_10663521	3300002076	Corn, Switchgrass And Miscanthus Rhizosphere	TDVDQARQAGAAGYVTKDRIAAELIEAIVEVVPR*
Ga0066395_103173221	3300004633	Tropical Forest Soil	SRADVDRSRDAGASGYVTKDRIASELVEAIVEVTRGRLP*
Ga0062594_1031703432	3300005093	Soil	QWPTACVLVLTGSNSRSDVDRARDAGAAGYVTKERIAAELIDAILEIGSR*
Ga0070692_102346841	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	TGSNSLTDVARAREAGAAGYVTKDRIAAQLIDAIRELAA*
Ga0070694_1008477831	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	QVLMVTGSDSREDVDAARSAGAAGYVTKDRIAGELIGAIFDASR*
Ga0070699_1008551063	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	LTGSNSKSDVDRAHAAGAAGYVTKERIAAELIDAILELAGR*
Ga0070672_1001482014	3300005543	Miscanthus Rhizosphere	SLSDVARAREAGAAGYVTKDRIAAQLIDAIRELAA*
Ga0070696_1007039391	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	GSNSRADVDRSREAGASGYITKDRIASELVAAIVEVSRRRLP*
Ga0070693_1010636441	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	LTGSNSRKDVDRARDAGAAGYVTKERIAAELIDAILEIGSR*
Ga0066700_105190823	3300005559	Soil	RADVDRARQAGAAGYVTKDRIAAELIDAILEVVAR*
Ga0066693_103940661	3300005566	Soil	SNSRLDVVRAREVGAAGYVTKERIAAELIDAILEIGSR*
Ga0066703_104615934	3300005568	Soil	TGSNARTDVDRARQAGADGYVTKDRIAAELVEAILEVAQR*
Ga0066702_105895704	3300005575	Soil	SNSRADVDRSREAGASGYVTKDRIASELIATIVEVTHRRLP*
Ga0068854_1017433111	3300005578	Corn Rhizosphere	RVLMVTGSDARQDVDAARTAGAAGYVTKDKIAAELIGAILDTAA*
Ga0066691_108923921	3300005586	Soil	KTDVDRARESGAAGYVTKDRIAAELIEAILEVVQR*
Ga0066706_110373343	3300005598	Soil	TGSNSRADVDRARKAGAAGYVTKDRIAAELVEAILEVAER*
Ga0068859_1014476563	3300005617	Switchgrass Rhizosphere	GSDDPADIAKAREAGAAGYITKDRIAEQLVEAILEAVR*
Ga0068861_1008682201	3300005719	Switchgrass Rhizosphere	LMVTGSDAQEDVEAARTAGAAGYMTKDRIAAELVVAILDVAA*
Ga0066903_1053523632	3300005764	Tropical Forest Soil	LIVTGSDARQDVDAARTAGADGYVTKDRIAAELIGAIIGTTV*
Ga0075286_10692841	3300005886	Rice Paddy Soil	MVTGSDARQDVGAARAAGAAGYVTKDRIAAELVGAILDVAA*
Ga0075290_10348291	3300005889	Rice Paddy Soil	QVLMVTGSDARQDVGAARAAGAAGYVTKDRIAAELVGAILDVAA*
Ga0075278_10132014	3300005893	Rice Paddy Soil	VRILVLTGSNSRDDVDRSREAGASGYVTKDRIASELVEAIVEVASR*
Ga0075282_10065681	3300005896	Rice Paddy Soil	SRADVDRSREAGASGYVTKDRIASELVATIVEVTQRRLP*
Ga0066652_1006913713	3300006046	Soil	SNSKTDVDRAREAGAAGYVTKERIAAELIDAILELANR*
Ga0066652_1007721073	3300006046	Soil	TGSNSRTDVDRARQAGAAGYVTKDRIAAELIDAIVEIAGR*
Ga0066652_1019190411	3300006046	Soil	SDVARAREAGASGYITKDKIASQLIETIVELGPRTNGT*
Ga0075417_105293523	3300006049	Populus Rhizosphere	VDIDRARKAGAAGYVTKDRIASELIEAIREVIPE*
Ga0070712_1001403615	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	ACILMLSGSSSRADVERARDAGVAGYVTKDRVASELIAAIVEIAKPT*
Ga0070712_1012882021	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MLTGSSSRTDVDRAREAGAAGYVTKERIAAELIDAIVEIGAR*
Ga0074056_113138313	3300006574	Soil	ARVVMVTGSDAQEDVDAARGAGATGYLTKDRIAAELVVAILDAAE*
Ga0074053_115432572	3300006575	Soil	QVLIVTGSDSRQDVDAARTAGAAGYVTKDKIAAELIGAILDTAA*
Ga0066653_101392513	3300006791	Soil	LTGSNSRSDVDRAREAGAAGYVTKERIAAELIDAILEIGNP*
Ga0066658_101154011	3300006794	Soil	SRADVDRSRAAGASGYVTKDRIASELVAAIVEVTQRRLP*
Ga0066658_109327133	3300006794	Soil	ADVDRSREAGASGYVTKDRIASELVDAILEVTKR*
Ga0066665_113450601	3300006796	Soil	AADIDRSRDAGAAGYVTKDRIASELVQAIVEAAGR*
Ga0079220_121546243	3300006806	Agricultural Soil	LILTGSNAAVDVDRSREAGAAAYVTKDRIAAQLIEAIRELAA*
Ga0075428_1014019141	3300006844	Populus Rhizosphere	QVDIDRARQAGAAGYVTKDRIASELIEAIREVIPE*
Ga0075431_1001452525	3300006847	Populus Rhizosphere	SRSDVDRAREAGAAGYVTKDRIAAELIEAIVEVAPR*
Ga0075434_1022626853	3300006871	Populus Rhizosphere	DSRSDVDRAREAGAAGYVTKDRIAAELIEAIVEVAPR*
Ga0079215_116151621	3300006894	Agricultural Soil	RTDVDRAREAGAAGYVTKDRIAAELIDAILEVVQR*
Ga0075426_109267693	3300006903	Populus Rhizosphere	NSLSDVARAREAGAAAYVTKDRIAAQLIDAIRELAA*
Ga0075436_1009836751	3300006914	Populus Rhizosphere	LSDVARAREAGAAAYVTKDRIAAQLIDAIRELAA*
Ga0066710_1024091333	3300009012	Grasslands Soil	DVARAREAGASAYVTKDKIASHLLDAIVELGPKPSGN
Ga0111539_124620712	3300009094	Populus Rhizosphere	VRQDVDAARTAGAAGYVTKDRIAAELIGAIFEVADD*
Ga0105243_130678951	3300009148	Miscanthus Rhizosphere	NARGDVDKARTSGAAGYVTKDRIAGELIDAIVEVVDK*
Ga0105242_120107163	3300009176	Miscanthus Rhizosphere	SDIDKARRAGAAAYVTKDRIASELIEAIMEAVKR*
Ga0126374_110294191	3300009792	Tropical Forest Soil	AAADVDSSRDAGAAGYVTKDRIASELVDAIVEAAGR*
Ga0126313_104052844	3300009840	Serpentine Soil	DVERAEAAGAAGYLTKDRIASELVDAIHAAAKGG*
Ga0126312_106281333	3300010041	Serpentine Soil	SRLDIDRARTSGAAGYVTKDRIALDLVAAIHHLVSTPE*
Ga0126380_122906863	3300010043	Tropical Forest Soil	TGSNSRADVDRSREAGAAGYVTKDRIASELVDAILEVTGRRLP*
Ga0126318_108127243	3300010152	Soil	DRSREAGASGYVTKDRIASELVATIVEVTRRRLP*
Ga0134070_103895331	3300010301	Grasslands Soil	RDDVDRARKAGAGAYVTKDQIASQLIDAILDLAA*
Ga0134067_104457911	3300010321	Grasslands Soil	TDIDRSRDAGAAGYVTKDRIASQLVEAIVEAAGR*
Ga0134084_102309113	3300010322	Grasslands Soil	GSDSAADVARSRDAGAVGYVTKDRIAAELLEAIAEAAAA*
Ga0134064_100749511	3300010325	Grasslands Soil	SRADVDRSREAGASGYVTKDRIASELVSAIVEVTRRRLP*
Ga0134064_102352173	3300010325	Grasslands Soil	SRSDVDRAREAGAAGYVTKERIAAELIDAILEIGNR*
Ga0134111_101428751	3300010329	Grasslands Soil	HACVLVLTGSNSRTDVTRARAAGAAGYVTKDRIAAELIDAIIEVVSK*
Ga0134071_106679571	3300010336	Grasslands Soil	RTDVDLARKAGAAGYVTKDRIPAELIDAIVEVVNR*
Ga0126377_130186482	3300010362	Tropical Forest Soil	SNSRADVDRARKAGASGYVTKDRIAAELIDAIVEIAER*
Ga0126379_118344063	3300010366	Tropical Forest Soil	NTAADVDRSRDAGAAGYVTKDRIASELVDAIVEAAGR*
Ga0105239_129964461	3300010375	Corn Rhizosphere	LMVTGSDAQEDVEAARTAGAAGYMTKDRIAAELVVAILDAAA*
Ga0105239_134722872	3300010375	Corn Rhizosphere	MVTGSDAQEDVDAARGAGALGYVTKDRIAAELVVAILDVAA*
Ga0134127_102612011	3300010399	Terrestrial Soil	LTGSNSRTDVARAREAGAAAYVTKDRIAAQLIEAIRELAA*
Ga0134122_123990781	3300010400	Terrestrial Soil	QKKIRVLMVTGSDARQDVDAARTAGAAGYVTKDKIAAELIGAILDTAA*
Ga0134121_116938113	3300010401	Terrestrial Soil	RGDVDEARKAGAAGYVTKDRIAAELVDAIIEIGSK*
Ga0120159_11268341	3300012014	Permafrost	SRTDVSRSREAGADGYVTKDRVAAELIDAIIEVAER*
Ga0137382_102457583	3300012200	Vadose Zone Soil	GSNSHNDIDRSRVSGAAGYVTKDLIASELIQAIVEAVP*
Ga0137382_105040751	3300012200	Vadose Zone Soil	RGDVDRARKAGAGAYVTKDQIASQLIDAILDLAA*
Ga0137374_101597521	3300012204	Vadose Zone Soil	TGSNSRTDVDRAREAGAAGYVTKDRIAAELIDAIIEVSEK*
Ga0137374_101886541	3300012204	Vadose Zone Soil	DVDRARQAGAAGYITKDRIAAELIEAIVKVAPQSF*
Ga0137379_103635381	3300012209	Vadose Zone Soil	MLTGSSAAADVARAREAGAEGYVTKDRIASELIDSIVSVTGK*
Ga0137378_118082133	3300012210	Vadose Zone Soil	GSNSRSDVDRARNAGAAGYVTKDRIAAELIDAIVEVAGRR*
Ga0137377_112146481	3300012211	Vadose Zone Soil	MLTGSDSRTDVERAREAGAAGYVTKNRIAAELIDAILEVVAR*
Ga0137377_112599963	3300012211	Vadose Zone Soil	SNARTDVDRARKSGAAGYVTKDRIAAELIDAIVEVVSR*
Ga0150985_1070730612	3300012212	Avena Fatua Rhizosphere	MLTGCNARNDVDRARQAGAAGYVTKDRIAAELIDAIVEISAAS*
Ga0150985_1132864543	3300012212	Avena Fatua Rhizosphere	ATRVLILTGSNSRTDVDRSRAAGASGYVTKDRIAAELIEAIIEIASRS*
Ga0137370_109317501	3300012285	Vadose Zone Soil	TGSNSTGDVARAREAGASAYVTKDKIASHLLDAIVELGIRPGGK*
Ga0137387_111054451	3300012349	Vadose Zone Soil	KSDVDRAREAGAAGYVTKERIAAELIDAILEIATR*
Ga0137372_104089212	3300012350	Vadose Zone Soil	GSNSRDDVDRARQAGAAGYVTKDRIAAQLVDTILAVARRNAA*
Ga0137369_104856321	3300012355	Vadose Zone Soil	ASGEDVDRARRAGAAGYVTKDRIAAELVGAILGVAER*
Ga0137371_100182081	3300012356	Vadose Zone Soil	DSRNDVDRAREAGAAGYVTKDRIAAEVIEAIVEIAPR*
Ga0137384_105405851	3300012357	Vadose Zone Soil	SADVDRARRAGAAGYITKDRIASQLIEAIIEVVSGS*
Ga0137375_107655283	3300012360	Vadose Zone Soil	TGSDAHQDVDAARSAGASGYVTKDRIGAELIGAILDVAV*
Ga0137375_112497193	3300012360	Vadose Zone Soil	SNSRDDVGRAREAGASGYVTKERIAAELIDAILEIAAR*
Ga0157352_10615371	3300012519	Unplanted Soil	GSNARTDIARAREAGASAYVTKDRIAAQLIEAIRELAA*
Ga0137373_106606583	3300012532	Vadose Zone Soil	NSRDDVGRAREAGASGYVTKERIAAELIDAILEIAER*
Ga0157304_10428702	3300012882	Soil	LRTPDQSRAELARAREAGAAAYVTKDRIAAQLIEAIRDLAA*
Ga0137396_111012411	3300012918	Vadose Zone Soil	DPADIAKARDAGAAGYITKDRIAERLVEAILDAAELP*
Ga0164300_100259921	3300012951	Soil	TAVDIDRARGAGAAGYITKDRIASQLVEAIVETAGR*
Ga0164301_105148941	3300012960	Soil	MLTGSNSRADVDRSRAAGASGYVTKDRIASELVATIVEVTRRRLP*
Ga0164301_105156211	3300012960	Soil	TGSNSLTDVARAREAGAAGYVTKDRIAAPLIDAIRELAA*
Ga0164301_114409693	3300012960	Soil	VLTGSNSRLDVVRAREVGAAGYVTKERIAAELIDAILEIGSR*
Ga0164301_118751963	3300012960	Soil	SDASEDVDAARSAGAAGYVTKDKIAAELIGAIFDASR*
Ga0134087_101517864	3300012977	Grasslands Soil	VDRSREAGASGYVTKDRIASELVSAIVEVTRRRLP*
Ga0164304_105812703	3300012986	Soil	SRIDVDRAREAGAAGYVTKDRIAAELIDAILEVAR*
Ga0164305_100194077	3300012989	Soil	RADVDRSRAVGAVGYVTKDRIASELVDAILEVRGRRLP*
Ga0157374_123779431	3300013296	Miscanthus Rhizosphere	GSNSRADVDRSRDAGASGYVTKDRIASELVAAIVEVRRRRLP*
Ga0120123_10400012	3300013770	Permafrost	LRRSNSRADVARARAAGASAYVTKDRIAAQLIDAIRELAAA*
Ga0075312_11519943	3300014254	Natural And Restored Wetlands	VAAARDAGGSGYVTKDKIASELVDAIRAAAPSCA*
Ga0163163_128009781	3300014325	Switchgrass Rhizosphere	TGSNSRGDVDKARTSGAAGYVTKDRIAGELIDAIVELVDK*
Ga0157380_132215611	3300014326	Switchgrass Rhizosphere	DAQEDVDAARGAGALGYVTKDRIAAELVVAILDVAA*
Ga0182024_122541653	3300014501	Permafrost	SNARTDVDRARQAGAAGYVTKDRIAAELVEAILEVADR*
Ga0173483_108609732	3300015077	Soil	GSNSRGDVDRARTSGAAGYVTKDRIAGELIDAIVGVVNR*
Ga0134089_101147421	3300015358	Grasslands Soil	MLTASNSRTDLDRAREAGAAGYVTKDRIAAELIDAILEVVAP*
Ga0134085_105571582	3300015359	Grasslands Soil	SRSDVDRARKAGAAGYVTKDRIAAELIDAIVEISARR*
Ga0132255_1026087403	3300015374	Arabidopsis Rhizosphere	VDAARGAGATGYLTKDRIAAELVVAILDAAAQPLR*
Ga0184619_101456423	3300018061	Groundwater Sediment	TGSNARADVARARDAGAAGYVTKDRIAAQLIEAIRELGKD
Ga0066655_105407951	3300018431	Grasslands Soil	RTDVDRARQAGAAGYVTKDRIAAELVEAILEVAGR
Ga0066669_113105271	3300018482	Grasslands Soil	LTGSNSRADVDRSREAGASGYVTKDRIASELVSAIVEVTRRRLP
Ga0190267_110759061	3300019767	Soil	RTDVARAREAGAAAYITKDRIAAQLIEAIRELGAN
Ga0179594_101605083	3300020170	Vadose Zone Soil	AAADVDRSRDAGAAGYVTKDRIASQLVEAIVEAAGR
Ga0210382_103349271	3300021080	Groundwater Sediment	TGSNSRIDVDRAREAGAAGYVTKDRIAAELIDAILEVAS
Ga0224712_106680172	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	VPAARRSSSRADVDRSREAGASGYVTKDRIASELVAAIVEVTHRRLP
Ga0247748_10871253	3300023168	Soil	SNSRTDVARAREAGAAAYVTKDRIAAQLIEAIRDLAA
Ga0247665_10597653	3300024219	Soil	SNSRTDVARAREAGAAAYVTKDRIAAQLIEAIRELAA
Ga0247664_11423171	3300024232	Soil	DSREDVDAARSAGAAGYVTKDKIAAELIGAIFDVSR
Ga0247679_10273631	3300024251	Soil	SRTDVARAREAGAAAYVTKDRIAAQLIEAIRELAA
Ga0209072_1005051	3300025329	Arctic Peat Soil	DLERAREAGATGYVSKDRIAAELVEAIREAAAADSSLS
Ga0207680_108788723	3300025903	Switchgrass Rhizosphere	SLTDVARAREAGAAAYVTKDRIAAQLIDAIRELAA
Ga0207680_112330803	3300025903	Switchgrass Rhizosphere	PVLGHVADVDRARQAGAAGYVTKDRIAAELIDAIIEIAGR
Ga0207684_108277641	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	AADVDRSRDAGAAGYITKDRIASQLVEAIVEAASR
Ga0207652_118051541	3300025921	Corn Rhizosphere	RGDVDRARQAGAAGYVTKDRIASELIDAIVEIVSR
Ga0207700_107816423	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	TGSNAAADVDRARDAGAAGYVTKDRIASQLVEAIVEAAGR
Ga0207644_115509932	3300025931	Switchgrass Rhizosphere	SDARADVDRARQAGASGYVTKDRIAAELIDAIVSAAGR
Ga0207669_101169854	3300025937	Miscanthus Rhizosphere	SNSRTDVDQARQAGDAGYVTKDRIAAELIEAIVEVVPR
Ga0207651_102377872	3300025960	Switchgrass Rhizosphere	MVTGSDAQEDVEAARTAGAAGYMTKDRIAAELVVAILDAAA
Ga0207668_103906792	3300025972	Switchgrass Rhizosphere	MVTGSDARQDVDAARTAGAAGYVTKDKIAAELIGAILDTAA
Ga0207640_116756011	3300025981	Corn Rhizosphere	SNSRTDVDRVREAGAAGYVTKERIAAELIDAILEIGAR
Ga0208529_10197462	3300026008	Rice Paddy Soil	SGLKVSILVLTGSNSRDDVDRSRAAGASGYVTKDRIASELVEAIVEVATR
Ga0208776_10248081	3300026014	Rice Paddy Soil	MVTGSDARQDVGAARAAGAAGYVTKDRIAAELVGAILDVAA
Ga0207674_115153971	3300026116	Corn Rhizosphere	SRIDVDRAREAGAAGYVTKDRIAAELIDAILEVAP
Ga0207683_107482403	3300026121	Miscanthus Rhizosphere	SDARQDFDAARAAGAAGYVTKDKIAAELIGAIIDLAE
Ga0209236_12217121	3300026298	Grasslands Soil	SNSRADVDRSREAGASGYVTKDRIASELVSAIVEVTRRRLP
Ga0209266_12062301	3300026327	Soil	SNAAADVDRARDAGAAGYVTKDRIASQLVEAIVEAAGR
Ga0209159_12649691	3300026343	Soil	RMLTGSNATGDVARAREAGASAYVTKDKIASQLIDTIVELGSRMNGK
Ga0209690_11892283	3300026524	Soil	AADVDRARDAGAAGYVTKDRIASQLVEAIVEAAGR
Ga0209805_13323233	3300026542	Soil	TGSNSRDDVDRARKAGASGYVTKDRIAAELIEAIVEIASRS
Ga0209590_101309093	3300027882	Vadose Zone Soil	SNSRSDVDRARKAGAAGYVTKDRIAAELIDAILEVVAR
Ga0247663_10925693	3300028145	Soil	DAQEDVDAARGAGALGYVTKDRIAAELVVAILDVAA
Ga0265319_10494625	3300028563	Rhizosphere	GSRVLIVTGSDARQDVDAARAAGAAGYVTKDRIAAELISVIIRVAA
Ga0247818_102420111	3300028589	Soil	VTGSDSRQDVDAARSAGAAGYITKDKIAAELIGAILDTAA
Ga0307309_100022744	3300028714	Soil	NAAVDVDRSRDAGAAGYVTKDRIASQLVDAIVDTAAR
Ga0307317_102595701	3300028720	Soil	AQEDVEAARTAGASGYMTKDKIAAELVVAILDAAA
Ga0307297_100134691	3300028754	Soil	GSNAAVDVDRSRDAGAAGYVTKDRIASQLVDAIVDTAAR
Ga0307297_103099503	3300028754	Soil	SNARADVARARDAGAAAYVTKDRIAAQLIDAIRELATG
Ga0307288_102963343	3300028778	Soil	GSSSSADVARAREAGVAGYVTKDRIASELIDSIVEAARKQA
Ga0307323_100771101	3300028787	Soil	GSNSRIDVDRAREAGAAGYVTKNRIAAELIDAILEVAS
Ga0307284_102184013	3300028799	Soil	MLTGSNSRSDVARAREAGAAAYVTKDRIAAQLIDAIRELAA
Ga0307294_100454533	3300028810	Soil	SNSRSDVARAREAGAAAYVTKDRIAAQLIDAIRELAA
Ga0247825_105265403	3300028812	Soil	ARSDVDRARRAGAAGYVTKDRIAAELIDAIIEVAGR
Ga0307302_102524023	3300028814	Soil	SRIDVDRAREVGAAGYVTKDRIAAELIDAIVEVAS
Ga0307302_103218451	3300028814	Soil	LTGSNSRSDVARAREAGAAAYVTKDRIAAQLIDAIRELAA
Ga0307286_100035397	3300028876	Soil	NSRTDVDQAREAGAAGYVTKDRIAAELIDAILEVVPR
Ga0307286_100442441	3300028876	Soil	GSNSRSDVARAREAGAAAYVTKDRIAAQLIDAIRELAA
Ga0307278_100744213	3300028878	Soil	RTDVDRAREAGAAGYVTKERIAAELIDAILEIAAR
Ga0265324_102685091	3300029957	Rhizosphere	NSRSDVDQAREAGASGYVTKDRIASELVEAIVKVAPR
Ga0307497_100099324	3300031226	Soil	GSDSHQDVDAARSAGAAGYITKDRIAAELIGAIIDTAA
Ga0308194_102347201	3300031421	Soil	GSNSRADVDRSREAGAVGYVTKDRIASELIEAILDVVKR
Ga0307374_101275226	3300031670	Soil	TGSNSRGDVDRARKAGAAGYVTKDRIAAELIDAIVEIAQKT
Ga0307373_103320902	3300031672	Soil	TGSNSRSDVDSAREAGASGYVTKDRIASELVEAIVEVAQST
Ga0318536_103746274	3300031893	Soil	SNSRSDVDSAREAGASGYVTKDRIASELVEAIVEVAQQK
Ga0306926_115127191	3300031954	Soil	NSRADVDRSREAGASGYVTKDRIASELVAAIVEVMQRRLP
Ga0307409_1020706723	3300031995	Rhizosphere	ADEADVQRAAEAGAVGYVTKDRILSDLVEAIAAAAGAEGSLS
Ga0308176_121426691	3300031996	Soil	TACVLVLTGSNSRSDVDRARDAGAAGYVTKERIAAELIDAIVEIGSR
Ga0306922_120720371	3300032001	Soil	DRVRVLVLTGSNSRADVDRSRQAGASGYVTKDRIASELVESIVEVAGR
Ga0318518_106224751	3300032090	Soil	SNSRDDVDRSREAGASGYVTKDRIASELVAAIVEVTRRRLP
Ga0307470_119261793	3300032174	Hardwood Forest Soil	TGSDAQEDVDAARGAGATGYLTKDRIAAELVVAILDAAAQPLR
Ga0310812_103933721	3300032421	Soil	AADVDRSRAVGAAGYITKDRIASQLVEAIVEAASR
Ga0334722_102812881	3300033233	Sediment	RDDVDRARQAGAAGYVTKDRIAAELIEAIVEIASR

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.47
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.47
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F034279

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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