Metagenome / Metatranscriptome Family F034670

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F034670
Family Type	Metagenome / Metatranscriptome
Number of Sequences	174
Average Sequence Length	56 residues
Representative Sequence	MASWVKCTDLKAQTVWVNLDNVTVMTWRDTPQDTEIIFIGGGQVIVRERPENLTKRS
Number of Associated Samples	111
Number of Associated Scaffolds	174

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	79.07 %
% of genes near scaffold ends (potentially truncated)	35.06 %
% of genes from short scaffolds (< 2000 bps)	87.93 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.65

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (51.149 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (21.839 % of family members)
Environment Ontology (ENVO)	Unclassified (39.080 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (63.793 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 10.59% β-sheet: 32.94% Coil/Unstructured: 56.47%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.65
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.65
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 174 Family Scaffolds
PF04392	ABC_sub_bind	10.92
PF03734	YkuD	3.45
PF07896	DUF1674	2.87
PF13561	adh_short_C2	2.30
PF03401	TctC	1.72
PF16868	NMT1_3	1.72
PF02195	ParBc	1.72
PF00034	Cytochrom_C	1.15
PF00589	Phage_integrase	1.15
PF06823	DUF1236	1.15
PF06776	IalB	1.15
PF09351	DUF1993	1.15
PF05724	TPMT	1.15
PF00072	Response_reg	0.57
PF02211	NHase_beta	0.57
PF13426	PAS_9	0.57
PF00293	NUDIX	0.57
PF01734	Patatin	0.57
PF00078	RVT_1	0.57
PF08546	ApbA_C	0.57
PF00275	EPSP_synthase	0.57
PF01189	Methyltr_RsmB-F	0.57
PF13586	DDE_Tnp_1_2	0.57
PF03459	TOBE	0.57
PF04986	Y2_Tnp	0.57
PF00872	Transposase_mut	0.57
PF01936	NYN	0.57
PF13449	Phytase-like	0.57
PF02668	TauD	0.57
PF00528	BPD_transp_1	0.57
PF01135	PCMT	0.57
PF13450	NAD_binding_8	0.57
PF13683	rve_3	0.57
PF02518	HATPase_c	0.57
PF02082	Rrf2	0.57
PF13417	GST_N_3	0.57
PF08241	Methyltransf_11	0.57
PF13531	SBP_bac_11	0.57
PF08240	ADH_N	0.57
PF05257	CHAP	0.57
PF01545	Cation_efflux	0.57
PF09948	DUF2182	0.57
PF00198	2-oxoacid_dh	0.57

COG ID	Name	Functional Category	% Frequency in 174 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	10.92
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	3.45
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	3.45
COG5508	Uncharacterized conserved protein, DUF1674 domain	Function unknown [S]	2.87
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	1.72
COG5342	Invasion protein IalB, involved in pathogenesis	General function prediction only [R]	1.15
COG0053	Divalent metal cation (Fe/Co/Zn/Cd) efflux pump	Inorganic ion transport and metabolism [P]	0.57
COG0144	16S rRNA C967 or C1407 C5-methylase, RsmB/RsmF family	Translation, ribosomal structure and biogenesis [J]	0.57
COG0508	Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component	Energy production and conversion [C]	0.57
COG0640	DNA-binding transcriptional regulator, ArsR family	Transcription [K]	0.57
COG1230	Co/Zn/Cd efflux system component	Inorganic ion transport and metabolism [P]	0.57
COG1414	DNA-binding transcriptional regulator, IclR family	Transcription [K]	0.57
COG1432	NYN domain, predicted PIN-related RNAse, tRNA/rRNA maturation	General function prediction only [R]	0.57
COG1725	DNA-binding transcriptional regulator YhcF, GntR family	Transcription [K]	0.57
COG1752	Predicted acylesterase/phospholipase RssA, containd patatin domain	General function prediction only [R]	0.57
COG1893	Ketopantoate reductase	Coenzyme transport and metabolism [H]	0.57
COG1959	DNA-binding transcriptional regulator, IscR family	Transcription [K]	0.57
COG2175	Taurine dioxygenase, alpha-ketoglutarate-dependent	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.57
COG2186	DNA-binding transcriptional regulator, FadR family	Transcription [K]	0.57
COG2188	DNA-binding transcriptional regulator, GntR family	Transcription [K]	0.57
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	0.57
COG2378	Predicted DNA-binding transcriptional regulator YobV, contains HTH and WYL domains	Transcription [K]	0.57
COG2518	Protein-L-isoaspartate O-methyltransferase	Posttranslational modification, protein turnover, chaperones [O]	0.57
COG2519	tRNA A58 N-methylase Trm61	Translation, ribosomal structure and biogenesis [J]	0.57
COG2524	Predicted transcriptional regulator, contains C-terminal CBS domains	Transcription [K]	0.57
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.57
COG3621	Patatin-like phospholipase/acyl hydrolase, includes sporulation protein CotR	General function prediction only [R]	0.57
COG3965	Predicted Co/Zn/Cd cation transporter, cation efflux family	Inorganic ion transport and metabolism [P]	0.57
COG4122	tRNA 5-hydroxyU34 O-methylase TrmR/YrrM	Translation, ribosomal structure and biogenesis [J]	0.57
COG4667	Predicted phospholipase, patatin/cPLA2 family	Lipid transport and metabolism [I]	0.57

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	51.15 %
Unclassified	root	N/A	48.85 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	51.15 %
Unclassified	root	N/A	48.85 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	51.15 %
Unclassified	root	N/A	48.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	39.08 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.85 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	34.48 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.85 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	17.24 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	1.72 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.85 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4.02 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.72 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	0.57 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.57 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.85 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.87 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.72 %
Rhizobiales bacterium GAS188	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS188	0.57 %
Pseudolabrys	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys	0.57 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.85 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.72 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.57 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.57 %
unclassified Pseudolabrys	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys	0.57 %
Rhizobiales bacterium GAS188	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS188	0.57 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.85 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.72 %
Pseudolabrys sp. Root1462	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	0.57 %
Bradyrhizobium sp. URHD0069	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	0.57 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.57 %
Rhizobiales bacterium GAS188	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS188	0.57 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.57 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000597\|AF_2010_repII_A1DRAFT_10139192	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	587	Open in IMG/M
3300004092\|Ga0062389_101851646	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	782	Open in IMG/M
3300004633\|Ga0066395_10197096	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1052	Open in IMG/M
3300004633\|Ga0066395_10974950	Not Available	516	Open in IMG/M
3300004635\|Ga0062388_101976581	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	602	Open in IMG/M
3300005332\|Ga0066388_100000859	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	15778	Open in IMG/M
3300005332\|Ga0066388_100285985	Not Available	2292	Open in IMG/M
3300005332\|Ga0066388_100394672	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2029	Open in IMG/M
3300005332\|Ga0066388_100490628	All Organisms → cellular organisms → Bacteria	1865	Open in IMG/M
3300005332\|Ga0066388_100886555	All Organisms → cellular organisms → Bacteria	1472	Open in IMG/M
3300005332\|Ga0066388_101179876	Not Available	1306	Open in IMG/M
3300005332\|Ga0066388_103130645	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	845	Open in IMG/M
3300005332\|Ga0066388_103936867	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	757	Open in IMG/M
3300005332\|Ga0066388_107677262	Not Available	540	Open in IMG/M
3300005363\|Ga0008090_15647097	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1065	Open in IMG/M
3300005436\|Ga0070713_100679771	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	982	Open in IMG/M
3300005436\|Ga0070713_101692542	Not Available	614	Open in IMG/M
3300005439\|Ga0070711_100369544	Not Available	1157	Open in IMG/M
3300005440\|Ga0070705_101264504	Not Available	610	Open in IMG/M
3300005444\|Ga0070694_101172810	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
3300005457\|Ga0070662_100344306	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1220	Open in IMG/M
3300005533\|Ga0070734_10564006	Not Available	648	Open in IMG/M
3300005591\|Ga0070761_10074154	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1933	Open in IMG/M
3300005610\|Ga0070763_10245771	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	968	Open in IMG/M
3300005713\|Ga0066905_101552496	Not Available	604	Open in IMG/M
3300005718\|Ga0068866_11222367	Not Available	543	Open in IMG/M
3300005764\|Ga0066903_101227583	All Organisms → cellular organisms → Bacteria	1394	Open in IMG/M
3300005764\|Ga0066903_102060271	Not Available	1097	Open in IMG/M
3300005764\|Ga0066903_102149377	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1075	Open in IMG/M
3300005764\|Ga0066903_102518764	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	996	Open in IMG/M
3300005764\|Ga0066903_104332425	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	758	Open in IMG/M
3300005764\|Ga0066903_105431156	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	672	Open in IMG/M
3300005764\|Ga0066903_107414730	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	566	Open in IMG/M
3300005764\|Ga0066903_108445094	All Organisms → cellular organisms → Bacteria → Proteobacteria	525	Open in IMG/M
3300005764\|Ga0066903_108946824	Not Available	507	Open in IMG/M
3300006059\|Ga0075017_100034793	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3331	Open in IMG/M
3300006162\|Ga0075030_100444170	Not Available	1033	Open in IMG/M
3300006174\|Ga0075014_100032172	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2125	Open in IMG/M
3300006881\|Ga0068865_100903973	Not Available	768	Open in IMG/M
3300006954\|Ga0079219_12042068	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300009147\|Ga0114129_11133480	Not Available	977	Open in IMG/M
3300009176\|Ga0105242_11967120	Not Available	626	Open in IMG/M
3300009792\|Ga0126374_11102281	Not Available	630	Open in IMG/M
3300009792\|Ga0126374_11145934	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	619	Open in IMG/M
3300010046\|Ga0126384_10417481	Not Available	1137	Open in IMG/M
3300010046\|Ga0126384_11765503	Not Available	587	Open in IMG/M
3300010048\|Ga0126373_10006358	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	9254	Open in IMG/M
3300010358\|Ga0126370_10514066	Not Available	1015	Open in IMG/M
3300010359\|Ga0126376_10702753	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	973	Open in IMG/M
3300010359\|Ga0126376_11353015	Not Available	735	Open in IMG/M
3300010359\|Ga0126376_12482089	Not Available	566	Open in IMG/M
3300010360\|Ga0126372_10978073	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	856	Open in IMG/M
3300010360\|Ga0126372_11785761	Not Available	658	Open in IMG/M
3300010361\|Ga0126378_12846486	Not Available	552	Open in IMG/M
3300010362\|Ga0126377_10745973	All Organisms → cellular organisms → Bacteria	1034	Open in IMG/M
3300010362\|Ga0126377_10755741	Not Available	1028	Open in IMG/M
3300010366\|Ga0126379_10941039	Not Available	967	Open in IMG/M
3300010366\|Ga0126379_11212858	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	861	Open in IMG/M
3300010371\|Ga0134125_11655183	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	696	Open in IMG/M
3300010375\|Ga0105239_11304247	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	837	Open in IMG/M
3300010376\|Ga0126381_101719829	All Organisms → cellular organisms → Bacteria → Proteobacteria	906	Open in IMG/M
3300010376\|Ga0126381_101854948	All Organisms → cellular organisms → Bacteria	870	Open in IMG/M
3300010396\|Ga0134126_10305008	Not Available	1868	Open in IMG/M
3300010396\|Ga0134126_10977611	Not Available	949	Open in IMG/M
3300012211\|Ga0137377_10636872	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	1002	Open in IMG/M
3300012948\|Ga0126375_10212170	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1281	Open in IMG/M
3300012948\|Ga0126375_11935780	Not Available	519	Open in IMG/M
3300012971\|Ga0126369_11007963	Not Available	920	Open in IMG/M
3300014489\|Ga0182018_10407472	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	727	Open in IMG/M
3300014501\|Ga0182024_10094663	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4378	Open in IMG/M
3300015373\|Ga0132257_101965931	Not Available	754	Open in IMG/M
3300016270\|Ga0182036_11758716	All Organisms → cellular organisms → Bacteria → Proteobacteria	524	Open in IMG/M
3300016294\|Ga0182041_12037626	Not Available	535	Open in IMG/M
3300016319\|Ga0182033_10238448	All Organisms → cellular organisms → Bacteria	1471	Open in IMG/M
3300016319\|Ga0182033_11890498	Not Available	543	Open in IMG/M
3300016357\|Ga0182032_10754314	Not Available	820	Open in IMG/M
3300016357\|Ga0182032_10770952	All Organisms → cellular organisms → Bacteria	811	Open in IMG/M
3300016371\|Ga0182034_10502432	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1011	Open in IMG/M
3300016371\|Ga0182034_11036416	Not Available	710	Open in IMG/M
3300016371\|Ga0182034_11423996	Not Available	606	Open in IMG/M
3300016387\|Ga0182040_10205730	All Organisms → cellular organisms → Bacteria	1450	Open in IMG/M
3300016387\|Ga0182040_10212537	All Organisms → cellular organisms → Bacteria	1430	Open in IMG/M
3300016404\|Ga0182037_10281624	All Organisms → cellular organisms → Bacteria	1329	Open in IMG/M
3300016404\|Ga0182037_10647176	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	901	Open in IMG/M
3300016422\|Ga0182039_10011883	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5084	Open in IMG/M
3300016445\|Ga0182038_10872274	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	792	Open in IMG/M
3300016445\|Ga0182038_11836304	Not Available	547	Open in IMG/M
3300017924\|Ga0187820_1067037	Not Available	992	Open in IMG/M
3300017955\|Ga0187817_10048890	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2604	Open in IMG/M
3300017970\|Ga0187783_10012465	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6254	Open in IMG/M
3300017970\|Ga0187783_10134582	Not Available	1822	Open in IMG/M
3300017970\|Ga0187783_10787252	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300018034\|Ga0187863_10447844	All Organisms → cellular organisms → Bacteria	721	Open in IMG/M
3300018058\|Ga0187766_10945858	Not Available	610	Open in IMG/M
3300018060\|Ga0187765_10113281	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1493	Open in IMG/M
3300018062\|Ga0187784_11320250	Not Available	572	Open in IMG/M
3300018062\|Ga0187784_11620697	Not Available	512	Open in IMG/M
3300018085\|Ga0187772_10121981	All Organisms → cellular organisms → Bacteria → Proteobacteria	1700	Open in IMG/M
3300018085\|Ga0187772_10940436	Not Available	629	Open in IMG/M
3300018088\|Ga0187771_10046268	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3374	Open in IMG/M
3300019786\|Ga0182025_1297877	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1540	Open in IMG/M
3300021406\|Ga0210386_10146393	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1973	Open in IMG/M
3300021560\|Ga0126371_10068129	All Organisms → cellular organisms → Bacteria → Proteobacteria	3452	Open in IMG/M
3300021560\|Ga0126371_10182455	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2184	Open in IMG/M
3300021560\|Ga0126371_12043470	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	690	Open in IMG/M
3300021560\|Ga0126371_12250249	Not Available	658	Open in IMG/M
3300025906\|Ga0207699_10775253	Not Available	704	Open in IMG/M
3300025914\|Ga0207671_11289070	Not Available	569	Open in IMG/M
3300025916\|Ga0207663_11574056	Not Available	529	Open in IMG/M
3300025928\|Ga0207700_10889299	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	797	Open in IMG/M
3300026887\|Ga0207805_1005072	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS188	1470	Open in IMG/M
3300027648\|Ga0209420_1169430	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300027853\|Ga0209274_10272781	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	867	Open in IMG/M
3300027874\|Ga0209465_10105006	Not Available	1387	Open in IMG/M
3300027889\|Ga0209380_10492053	Not Available	716	Open in IMG/M
3300027889\|Ga0209380_10643962	Not Available	611	Open in IMG/M
3300027911\|Ga0209698_10170902	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1772	Open in IMG/M
3300031543\|Ga0318516_10355197	Not Available	845	Open in IMG/M
3300031545\|Ga0318541_10253039	Not Available	979	Open in IMG/M
3300031545\|Ga0318541_10258243	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	968	Open in IMG/M
3300031545\|Ga0318541_10274139	Not Available	939	Open in IMG/M
3300031545\|Ga0318541_10849966	All Organisms → cellular organisms → Bacteria → Proteobacteria	509	Open in IMG/M
3300031546\|Ga0318538_10048096	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2073	Open in IMG/M
3300031564\|Ga0318573_10173701	Not Available	1136	Open in IMG/M
3300031564\|Ga0318573_10635596	Not Available	574	Open in IMG/M
3300031573\|Ga0310915_10071429	All Organisms → cellular organisms → Bacteria	2287	Open in IMG/M
3300031573\|Ga0310915_11242808	Not Available	514	Open in IMG/M
3300031668\|Ga0318542_10164649	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1107	Open in IMG/M
3300031679\|Ga0318561_10563084	Not Available	628	Open in IMG/M
3300031679\|Ga0318561_10714351	Not Available	551	Open in IMG/M
3300031708\|Ga0310686_103695153	Not Available	635	Open in IMG/M
3300031708\|Ga0310686_116568591	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300031719\|Ga0306917_11124084	Not Available	611	Open in IMG/M
3300031736\|Ga0318501_10782262	Not Available	528	Open in IMG/M
3300031736\|Ga0318501_10834722	Not Available	511	Open in IMG/M
3300031744\|Ga0306918_10000723	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	15557	Open in IMG/M
3300031744\|Ga0306918_10843382	Not Available	715	Open in IMG/M
3300031768\|Ga0318509_10095706	All Organisms → cellular organisms → Bacteria	1595	Open in IMG/M
3300031770\|Ga0318521_10798671	Not Available	575	Open in IMG/M
3300031796\|Ga0318576_10408997	Not Available	641	Open in IMG/M
3300031798\|Ga0318523_10314628	Not Available	781	Open in IMG/M
3300031833\|Ga0310917_10124216	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1683	Open in IMG/M
3300031833\|Ga0310917_11062151	Not Available	541	Open in IMG/M
3300031879\|Ga0306919_10493458	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	944	Open in IMG/M
3300031879\|Ga0306919_11455288	Not Available	516	Open in IMG/M
3300031880\|Ga0318544_10066135	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1328	Open in IMG/M
3300031890\|Ga0306925_10002712	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	15344	Open in IMG/M
3300031890\|Ga0306925_10299632	Not Available	1729	Open in IMG/M
3300031890\|Ga0306925_10315828	Not Available	1679	Open in IMG/M
3300031890\|Ga0306925_10957271	All Organisms → cellular organisms → Bacteria	876	Open in IMG/M
3300031893\|Ga0318536_10439525	Not Available	658	Open in IMG/M
3300031912\|Ga0306921_11998545	Not Available	617	Open in IMG/M
3300031941\|Ga0310912_11417324	Not Available	524	Open in IMG/M
3300031942\|Ga0310916_11138765	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300031946\|Ga0310910_10158758	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1734	Open in IMG/M
3300031981\|Ga0318531_10487912	Not Available	558	Open in IMG/M
3300032001\|Ga0306922_10110752	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2912	Open in IMG/M
3300032010\|Ga0318569_10616761	Not Available	505	Open in IMG/M
3300032035\|Ga0310911_10396980	Not Available	798	Open in IMG/M
3300032051\|Ga0318532_10177375	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	756	Open in IMG/M
3300032051\|Ga0318532_10313007	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	557	Open in IMG/M
3300032051\|Ga0318532_10367731	Not Available	511	Open in IMG/M
3300032060\|Ga0318505_10200568	All Organisms → cellular organisms → Bacteria	934	Open in IMG/M
3300032060\|Ga0318505_10483021	Not Available	585	Open in IMG/M
3300032076\|Ga0306924_10018123	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	7415	Open in IMG/M
3300032076\|Ga0306924_10554411	Not Available	1304	Open in IMG/M
3300032076\|Ga0306924_11733339	Not Available	653	Open in IMG/M
3300032090\|Ga0318518_10632543	Not Available	545	Open in IMG/M
3300032174\|Ga0307470_10225587	All Organisms → cellular organisms → Bacteria → Proteobacteria	1218	Open in IMG/M
3300032261\|Ga0306920_103390658	Not Available	592	Open in IMG/M
3300033289\|Ga0310914_10303604	Not Available	1439	Open in IMG/M
3300033290\|Ga0318519_10140011	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1344	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.40%
Host-Associated	Host-Associated	4.60%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.23%
Aquatic	Environmental → Aquatic	5.17%
Plants	Host-Associated → Plants	4.60%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	90.23%
Freshwater	Environmental → Aquatic → Freshwater	2.87%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.87%
Sediment	Environmental → Aquatic → Sediment	2.30%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	60.34%
Loam	Environmental → Terrestrial → Soil → Loam	21.84%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.05%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.87%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.30%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.30%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.15%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.57%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.57%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	40.80%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.39%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	17.24%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.32%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.60%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.30%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.30%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.72%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.72%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.15%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.15%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.57%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.57%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.57%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	21.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.82%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	14.37%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	13.79%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	5.75%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.60%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.87%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.30%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.72%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.15%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.15%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.15%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	1.15%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.15%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.15%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.57%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.57%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.57%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.57%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.57%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.57%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.57%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.57%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.57%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.57%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.57%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.57%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.57%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.57%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300019786	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026887	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 49 (SPAdes)	Environmental	Open in IMG/M
3300027648	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A1DRAFT_101391922	3300000597	Forest Soil	MASWVKCTDLKAQTVWVNLDNVTVMTWRDTPQDTEIIFIGGGEVIVRERPENLTKRS*
Ga0062389_1018516462	3300004092	Bog Forest Soil	MAKWVKCTDEKGQTVWVNLDNVTNMMRYEAPRQYTEIIFVGGGRVIAQERPEDLTRGE*
Ga0066395_101970962	3300004633	Tropical Forest Soil	MASWVKCSDLKAQTVWVNLDNVTMMTWRDIPQDTEIIFIGGGQVIVLERPESLTERS*
Ga0066395_109749501	3300004633	Tropical Forest Soil	AQTVWVNLDNVTVMSWRDTPQDTEIIFIGGGQVIVRERPENLTKRS*
Ga0062388_1019765812	3300004635	Bog Forest Soil	ERSTMAKWVKCTDEKGQTVWVNLDNVTNMMRYEAPRQYTEIIFVGGGRVIAQERPEDLTRGE*
Ga0066388_10000085916	3300005332	Tropical Forest Soil	MATWAKCTDTKGQTVWVNMDNVTTMMWRDQPQRGTEIILVGGGQLIVRDRPEDLTAFR*
Ga0066388_1001247952	3300005332	Tropical Forest Soil	MATWAKCTDTKGQTVWVNMDNVTTMMWREQPQRGTEIILVGGGQVVVRDRPEDMTAFR*
Ga0066388_1002859852	3300005332	Tropical Forest Soil	MASWAKCTDLKAQTVWVNLDNVTVMSWRDTPQDTEIIFIGGGQVIVRERPENLTKRS*
Ga0066388_1003946721	3300005332	Tropical Forest Soil	MASWVKCTDLKAQTVWVNLDNVTVMTWRDTPQDTEVIFIGGGEVIVRERPEDLTSRS*
Ga0066388_1004906281	3300005332	Tropical Forest Soil	MASWVKCTDLKAQTVWVNLDNVTVMTWRNIPQDTEIIFIGGGQVIVREQPESLTKRS*
Ga0066388_1008865552	3300005332	Tropical Forest Soil	MASWVTCTDLKAQTVWVNLDNVTVMTWRDTPQDTEIIFIGGGQVIVRERPENLTKRS*
Ga0066388_1011798761	3300005332	Tropical Forest Soil	MASWVKCTDLKAQTVWVNLENVTVMTWRDTLQDTEIVFIGGSQVIVRERPENLTKHS*
Ga0066388_1031306452	3300005332	Tropical Forest Soil	MASWVKCTDLKAKTVWVNLDNVTVMTWRDTPQDTEIIFIGGGEVIVRERPED
Ga0066388_1039368672	3300005332	Tropical Forest Soil	MASWVKCTDLKAQTVWVNLDNVTVMTWRDTPQDTEIIFIGGGQVIVRERPENLTKRS*
Ga0066388_1076772621	3300005332	Tropical Forest Soil	MATWAKCTDTKGQTVWVNMDNVTTMMWRDQPQRGTEIILVGGGQVVVRDRPEDLTAFR*
Ga0008090_156470972	3300005363	Tropical Rainforest Soil	MASWVKCSDLKSQTVWVNLDNVTMMTWRDTPQDTEIIFIGGGQVIVLERPESLTERS*
Ga0070713_1006797711	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	TDLKAQTVWVNLDNVTVMTWRDTPQDTEIIFIGGGQVIVPERPENLTKRP*
Ga0070713_1016925421	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MASWVKCTDLKAQTVWVNLDNVTIMTWRDTPQDTEIIFIGRGQVTVRERPENLTKRP*
Ga0070711_1003695442	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MASWVKCTDLKAQTVWVNLDNVTIMTWRDSPQDTEIIFIGGGQVTVRERPENLTKRP*
Ga0070705_1012645041	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MASWAKCTDLKAQTVWVNLDNVTVMTWRDTPQDTEIIFIGGGQVIVPERPENLTKRP*
Ga0070694_1011728102	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MASWVKCTDLKAQTVWVNLDNVTVMTWRDTPQDTEIIFIGGGQVIVRERPEN
Ga0070662_1003443061	3300005457	Corn Rhizosphere	MASWAKCTDLKAQTVWVNLDNVTVMTWRDTPQDTEIIFIGGGQVIVRERPENLTKRS*
Ga0070734_105640061	3300005533	Surface Soil	MATFVKCTDDKGQTVWVNLDNVTTMHWRDNPSASCEVVFIGGGLVVVRERPEDLEKQT*
Ga0070761_100741543	3300005591	Soil	MAKWVKCTDEKGQTVWVNLDNVTNMMRYEAPQQYTEIIFVGGGRVIARERPEDLIHGE*
Ga0070763_102457713	3300005610	Soil	MAKWVKCTDEKGQTVWVNLDNVTNMMRCEAPRQYTEIIFVGGGRIIAQERPEDLIHSE*
Ga0066905_1015524962	3300005713	Tropical Forest Soil	MASWVKCTDLKAQTVWVNLENVTVMTWRDTLQDTEIVFIGGGQVIVRERPENLTKHS*
Ga0068866_112223671	3300005718	Miscanthus Rhizosphere	MASWVKCTDLKAQTVWVNLDNVTVMTWRDTPQDTEIIFIGGGQVIVRERPENLTKRP*
Ga0066903_1012275832	3300005764	Tropical Forest Soil	MASWVKCSDLKAQTVWINLDNVTVMTWRDIPQDTEIIFIGGGQVIVRERPENLTKRS*
Ga0066903_1020602712	3300005764	Tropical Forest Soil	MASWVKCTDLKAQTVWVNLDNVTVMSWRDTPQDTEIIFIGGGQVIVRERPENLTKRS*
Ga0066903_1021493772	3300005764	Tropical Forest Soil	MASWVKCTDLKAQTVWVNLDNVTVMTWSDTPQDTEIIFIGGGEVIVRERPEK*
Ga0066903_1025187641	3300005764	Tropical Forest Soil	MASWVKCTDLKAQPVWVNLDNVTVMSRRDTPQDTEIIFIGGGQVIVRERPENLTKRT*
Ga0066903_1043324252	3300005764	Tropical Forest Soil	MASWVRCTDLKAQTVWVNLDNVTVMTWRDTPQDNEIIFIGGGQVIVRERPENLTKRS*
Ga0066903_1054311561	3300005764	Tropical Forest Soil	GEFPAMASWVKCTDLKAQTVWVNLDNVTVMTWRDTPQDTEIIFIGGGEVIVRERPEDLTKRS*
Ga0066903_1074147301	3300005764	Tropical Forest Soil	MASWVKCTDLKAQTVWVNLDNVTVMTWRDTPQDTEIIFIGGGEVIVRERP
Ga0066903_1084450941	3300005764	Tropical Forest Soil	MASWVKCTDLKAQTVWVNLDNVTVMIWRDIPQDTEIIFIGGGQVIVREQPESLTKHS*
Ga0066903_1089468241	3300005764	Tropical Forest Soil	EFPAMASWVKCTDLKAQTVWVNLDNVTVMTWRDTPQATEIIFIGGGEVIVRERPEDLTKRS*
Ga0075017_1000347932	3300006059	Watersheds	MASWVKCTDLKAQTVWVNLDNVTVTWPDTPQDTEIVFIGGGQVVVRERPENLTKRS*
Ga0075030_1004441701	3300006162	Watersheds	MASCVKCTDLKAQTVWVNLDNVTVTWPDTPQDTEIVFIGGGQVVVRKRPENLTKRS*
Ga0075014_1000321721	3300006174	Watersheds	MASWVKCTDLKAQTVWVNLDNVTVTWPDTPQDTEIVFIGGGQVVVRERPEKLD
Ga0068865_1009039732	3300006881	Miscanthus Rhizosphere	MASWVKCTDLKAQTVWVNLDNATVITWRDTPQDTEIIFIGGGQVIVRERPENLTKRP*
Ga0079219_120420682	3300006954	Agricultural Soil	MASWVKCTDLKAQNVWVNLDNVTVMTWRDTPQDTEIIFIGGGEIIVRERPEDLTKRS*
Ga0114129_111334801	3300009147	Populus Rhizosphere	MASWAKCTDLKAQTVWVNLDNVTVMTWPDTPQDTEIVFIGGGQVIVRERSENLTKRP*
Ga0105242_119671201	3300009176	Miscanthus Rhizosphere	MASWVKCTDLKAQTVWVNLDNATVITWRDTPQDTEIIFIGGGQVIVPERPENLTKRP*
Ga0126374_111022811	3300009792	Tropical Forest Soil	KCTDLKAQTVWVNLDNVTVMTWRDTPQDTEIIFIGGGQVIVRGRPENLTKRR*
Ga0126374_111459341	3300009792	Tropical Forest Soil	MASWVKCTDLKAQTVWVNLDNVTVMTWRDTPQDTEIIFIGGGEVIVRERPEK*
Ga0126384_104174813	3300010046	Tropical Forest Soil	MASWVKCTDLKAQTVWVNLDNVTVMTWRDTPQDTEIIFIGGGEVIVRERPEDLTKRS*
Ga0126384_117655032	3300010046	Tropical Forest Soil	MATWAKCTDTKGQTVWVNLDNVTTIMWREQPPRGTEIILIGGGQVIVRDRPEDLMAFR*
Ga0126373_100063587	3300010048	Tropical Forest Soil	MASWVKCTDLKPQTVWVNLDNVTVMTWRDTPQDTEISFIGGGEVIVRERPEDLTKRS*
Ga0126370_105140661	3300010358	Tropical Forest Soil	KAQTVWVNLDNVTVMSWRDTPQDTEIIFIGGGQVIVRERPENLTKRS*
Ga0126376_107027531	3300010359	Tropical Forest Soil	MASWVKCTDLKAQTVWVKLENVTVMTWRDTLQDTEIVFIGGSQVIVRERPENLTKHS*
Ga0126376_113530152	3300010359	Tropical Forest Soil	RWQGEFPAMASWAKCTDLKAQTVWVNLDNVTVMSWRDTPQDTEIIFIGGGQVIVRERPENLTKRS*
Ga0126376_124820892	3300010359	Tropical Forest Soil	MATWAKCTDTKGQTVWVNMDNVTTMMWREQPQRGTEIILVGGGQVIVRDRPEDLTAFR*
Ga0126372_109780733	3300010360	Tropical Forest Soil	MASWVKCTDLKAQTVWVNLDNVTVMTWRDAPQDTEIIFIGGGEVIVRERPEDLTKRS*
Ga0126372_117857612	3300010360	Tropical Forest Soil	MASWAKCSDTKKQTIWVNLDNVTTMMWREVPTPGTEIIFTTGGQVVVRERPEDLTAFLPTR*
Ga0126378_128464861	3300010361	Tropical Forest Soil	MASWVRCTDLKAQTVWVNLDNVTVMTWRDTPQDTEIIFIGGGEVIVRERPENLTNRS*
Ga0126377_107459731	3300010362	Tropical Forest Soil	MASWVKCTDLKAQTVWVNLDNVTVMTWRDTPQDTEIIFIGGGQIIVRERPENLTNRS*
Ga0126377_107557412	3300010362	Tropical Forest Soil	MATWAKCTDTKGQTVWVNMDNVTTMMWRDQPQRGTEIILVGGGQVIVRDRPEDLTAFR*
Ga0126379_109410392	3300010366	Tropical Forest Soil	MASWVKCTDLKAQTVWVNLDNVTVMTWRDAPQDTEIIFIGGGQVIVRERPENLTKRS*
Ga0126379_112128582	3300010366	Tropical Forest Soil	MASWVKCTDLKAQTVWVNLDNVTVMTWRDTPQDTEIIFIGGGEVIVRERPENLTERS*
Ga0134125_116551832	3300010371	Terrestrial Soil	QFGLKQDQSGQGKAPAMASWVKCTDLKAQTVWVNLDNVTVMTWRDTPQDTEIIFIGGGQVIVRERPENLTKRP*
Ga0105239_113042472	3300010375	Corn Rhizosphere	RTSSSTQSGQGKAPAMASWVKCTDLKAQTVWVNLHNVTVMTWRDTPQDTEIIFIGGGQVIVPERPENLTKRP*
Ga0126381_1017198291	3300010376	Tropical Forest Soil	MASWVKCTDLKAQTVWVNLDNVTVMTWRDTPQETEIIFIGGGQVIVRERPENLTKRS*
Ga0126381_1018549481	3300010376	Tropical Forest Soil	SWVKCTDLKAQTVWVNLDNVTVMTWRDTPQDTEIIFIGGGQVIVRERPENLTKRS*
Ga0134126_103050082	3300010396	Terrestrial Soil	VQFGLKQDQSGQGKAPAMASWVKCTDLKAQTVWVNLDNVTVMTWRDTPQDTEIIFIGGGQVIFRERPENLTKRS*
Ga0134126_109776111	3300010396	Terrestrial Soil	MASWAKCTDLKAQTVWVNLDNVTVMTWRDTPQDTEIIFIGGGQVIVRERPENLTKRP*
Ga0137377_106368721	3300012211	Vadose Zone Soil	AQTVWVNLDNVTMMTWRDIPQDTEIIFIGGGQVIVREQPESLTKRS*
Ga0126375_102121704	3300012948	Tropical Forest Soil	MATWAKCTDTKGQTVWVNMDNVTTMMWRDQPQRGTEIILVGGGQVIVRDRPEDMTAFR*
Ga0126375_119357802	3300012948	Tropical Forest Soil	MASWVKCTDLKAQTVWVNLDNVTVMTWSDTPQDTEIIFIGGGEVIVR
Ga0126369_110079632	3300012971	Tropical Forest Soil	MASWVKCTDLKAQPVWVNLDNVTVMTWRDTPQDTEIIFIGGGQVIVRERPENLTKRS*
Ga0182018_104074723	3300014489	Palsa	MAKWVKCTDEKGQTVWVNLDNVTNMMRYDAPRQYTEIIFVGGGRVIAQERPEDLTAGG*
Ga0182024_100946635	3300014501	Permafrost	MAKWVKCTDEKGQTVWVNLDNVTNMMRYEAPRQYTEIIFVGGGRVIAQERPEDLTCRG*
Ga0132257_1019659312	3300015373	Arabidopsis Rhizosphere	MASWVKCTDLQAQTVWVNLDNVTVMTWRDTPQDIEIIFIGGGQVRVRERPENLTKRP*
Ga0182036_117587162	3300016270	Soil	MASWVKCTDLKAQTVWVNLDNVTVMSWRDTPQDTEIIFIGGGEVIVRERPEDLTKRS
Ga0182041_120376262	3300016294	Soil	MASWVKCTDLKAQAVWVNLDNVTVMTWRDTPQDTEIIFIGGGEVIVRERPEDLT
Ga0182033_102384481	3300016319	Soil	MASWVKCTDLKAQAVWVNLDNVTVMTWRDTPQDTEIIFVGGGQVIVRERPEDL
Ga0182033_118904981	3300016319	Soil	MASWVKCTDLKAQTVWVNLDDVTVLTWRDTPQDTETIFIGGGQIIVRERPENLTKRS
Ga0182032_107543142	3300016357	Soil	MASWAKCTDLKAQTVWVNLDNVTVMSWRDTPQDTEIIFIGGGQVIVRERPENLTKRS
Ga0182032_107709521	3300016357	Soil	MASWVKCTDLKAQTVWVNLDNVTVMTWRNTPQDTEIVFIGGGEVIVRERPEDLTKRS
Ga0182034_105024322	3300016371	Soil	MASWVKCTDLKAQTVWINLDNVTVMTWRDTPQDTEIIFIGGGQVIVRERPENLTKRT
Ga0182034_110364161	3300016371	Soil	MASWVKCTDLKAQTVWVNLDNVTVMTWRDTPQDTEIIFIGGGQVIVRERP
Ga0182034_114239961	3300016371	Soil	MASWVKCTDLKAQTVWVNLDNVTVMTWRDTPQDTEIIFVGGGQVIVRERPEDSTK
Ga0182040_102057301	3300016387	Soil	MASWVTCTDLKAQTVWVNLNNVTVMTWRDTPQDTEIIFVGGGQVIVRERPEDLTKRS
Ga0182040_102125372	3300016387	Soil	MASWVKCTDLKAQTVWVNLDNVTVMSWRDTPQDTEIIFIGGGEVIVRERPEDLTKR
Ga0182037_102816241	3300016404	Soil	MASWVKCTDLKAQAVWVNLDNVTVMTWRDTPQDTEIIFVGGGQVIVRERPEDSTKRS
Ga0182037_106471761	3300016404	Soil	MASWVKCTDLKAQTVWVNLDNVTVMTWRDTPRDTEIIFIGGGEVIVRERPEDLTKRS
Ga0182039_100118831	3300016422	Soil	VKCTDLKAQPVWVNLDNVTVMTWRDTPQDTEIIFIGGGQVIVRERPENLAKRS
Ga0182038_108722741	3300016445	Soil	MASWVKCTDLKSQTVWVNLDNVTVMTWRDTPQDTEIIFIGGGQVMVRERPENLNNRS
Ga0182038_118363041	3300016445	Soil	MASWVECTDLKAQTVWVNLDNVTVMTWRDTPQDTEIIFIGGGQVIVRERPENLTKRS
Ga0187820_10670371	3300017924	Freshwater Sediment	MASWVKCTDLKAQTVWVNLDNVTVTWPDTPQDTEIVFIGGGQVVVRERPENLTKRS
Ga0187817_100488903	3300017955	Freshwater Sediment	MAWWVKCTDLKAQTVWVNLDNVTVTWPDTPQDTEIVFIGGGQVVVRERPEKLDQTLLN
Ga0187783_100124652	3300017970	Tropical Peatland	MASWVKCTDLKAQTVWINLDNVTVMTWRDARQDTEIIFIGGGEVIVRERPENLTKRS
Ga0187783_101345822	3300017970	Tropical Peatland	MASWVKCTDLKAQTVWVNLDNVTVMTWRDIPQDTEIIFIGGGQVIIRERPENLTKCS
Ga0187783_107872522	3300017970	Tropical Peatland	MAKWIKCTDEKSQTVWVNLDNVTNMTRYEEPRTFTEIILVGGGQITAQERPEDLIHD
Ga0187863_104478441	3300018034	Peatland	TDEKGQTVWVNLDNVTNMMRCEAPRQYTEIIFVGGGRIIAQERPEDLIHSE
Ga0187766_109458582	3300018058	Tropical Peatland	MASWVKCTDLKAQTVWVNLDNVTVMTWRDTPQDTEIIFIGGGEVIVREQPEDLTQRS
Ga0187765_101132812	3300018060	Tropical Peatland	MASWVKCTDLKAQIVWINLDNVTVMTWRDARQDTEIIFIGGGEVIVRERPEDLTKRS
Ga0187784_113202502	3300018062	Tropical Peatland	MAKWAKCTDEKSQAIWVNLDNVTNMTRYEKPGITEIILVGGGQITAQERPEDLIHE
Ga0187784_116206971	3300018062	Tropical Peatland	EPSAMAKWIKCTDEKSQTVWVNLDNVTNMTRHEKPRLSTEIIFVGGGQIYARERPEDIIR
Ga0187772_101219811	3300018085	Tropical Peatland	MAKWAKCTDEKSQTVWVNLDNVTNMTRYEKPGITEIILVGGGQITAQERPEDLIHE
Ga0187772_109404361	3300018085	Tropical Peatland	MAKWAKCTDEKSQTVWVNLDNVTNMTRYEKPGITEIILVGGGQITAQERPEDIIRE
Ga0187771_100462684	3300018088	Tropical Peatland	MAKWVKCTDHKQKTLWINLDNVTNMMPGDAREPGTEIVFIGGGQVIVRERPEDLIKQA
Ga0182025_12978773	3300019786	Permafrost	MKKGQTVWVNLDNVTNMMRYEAPRQYTEIIFVGGGRVIAQERPEDLTCRG
Ga0210386_101463931	3300021406	Soil	MASWVKCTDLKAQTVWVNLDNVTVMTWRDTPQDTEIIFIGGGQVIVRERPENLTKRS
Ga0126371_100681292	3300021560	Tropical Forest Soil	MASWVKCTDLKPQTVWVNLDNVTVMTWRDTPQDTEISFIGGGEVIVRERPEDLTKRS
Ga0126371_101824554	3300021560	Tropical Forest Soil	MASWVKCTDLKAQTVWVNLDNVTVMTWSDTPQDTEIIFIGGGEVIVRERPEDLTK
Ga0126371_120434702	3300021560	Tropical Forest Soil	MASWVKCTDLKAQTVWVNLDNVTVMTWRDTPQDTEIIFIGGGEVIVRE
Ga0126371_122502491	3300021560	Tropical Forest Soil	MASWVKCTDLKAQPVWVNLDNVTVMTWRDTPQDTEIIFIGGGQVIVRER
Ga0207699_107752531	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	FGLKQDQSGQGKAPAMASWVKCTDLKAQTVWVNLDNVTVMTWRDTPQDTEIIFIGGGQVIVRERPENLTKRP
Ga0207671_112890701	3300025914	Corn Rhizosphere	MASWVKCTDLKAQTVWVNLDNVTVMTWRDTPQDTEIIFIGGGQVIVRE
Ga0207663_115740561	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MASWVKCTDLKAQTVWVNLDNATIMTWRDSPQDTEIIFIGGGQVTVRERPENLTKRP
Ga0207700_108892991	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	LKAQTVWVNLDNVTVMTWRDTPQDTEIIFIGGGQVIVPERPENLTKRP
Ga0207805_10050721	3300026887	Tropical Forest Soil	GEFPAMASWVKCTDLKAQTVWVNLDNVTVMTWRDTPQDTEIIFIGGGEVIVRERPENLIKSS
Ga0209420_11694302	3300027648	Forest Soil	RVGFLRKPSAMAKWVKCTDEKGQTVWVNLDNVTNMMRYDAPRQYTEIIFVGGGRVIAQERPEDLTAGG
Ga0209274_102727812	3300027853	Soil	MAKWVKCTDEKGQTVWVNLDNVTNMMRYEAPQQYTEIIFVGGGRVIARERPEDLIHGE
Ga0209465_101050061	3300027874	Tropical Forest Soil	MASWVKCSDLKAQTVWVNLDNVTMMTWRDIPQDTEIIFIGGGQVIVLERPESLTERS
Ga0209380_104920531	3300027889	Soil	MAKWVKCTDEKDQTVWVNLDNVTNMMRYEAPRQYTEIIFVGGGRVIAQERPEDLTRGG
Ga0209380_106439621	3300027889	Soil	MAKWVKCTDEKGQTVWVNLDNVTNMMRYEAPQQYTEIIFVGGGRVIARERPEDGSAGVPPEERGE
Ga0209698_101709022	3300027911	Watersheds	MASCVKCTDLKAQTVWVNLDNVTVTWPDTPQDTEIVFIGGGQVVVRKRPENLTKRS
Ga0318516_103551972	3300031543	Soil	MASWVKCTDLKSQTVWVNLDNVTVMTWRDTPQDTEIIFIGGGQVIVRERPENLTKRS
Ga0318541_102530392	3300031545	Soil	MASWVKCTDLKAQTVWVNLDNVTVMTWRDTPQDTEIIFVGGGQVIVRERPEDLTKRS
Ga0318541_102582432	3300031545	Soil	MASWVKCTDLKAQTVWVNLDNVTVMTWRDTPQDTEIIFIGGGQVIV
Ga0318541_102741392	3300031545	Soil	MASWVKCTDLKSQTVWVNLDNVTVMTWRDTPQDTEIIFIGGGQVMVRERPENLTNRS
Ga0318541_108499661	3300031545	Soil	AMASWVKCTDLKAQTVWVNLDNVTVMTWRDTPRDTEIIFIGGGEVIVHERPEDLTKRS
Ga0318538_100480962	3300031546	Soil	MASWVKCTDLKAQTVWVNLDNVTVMTWRDTPRDTEIIFIGGGEVIVHERPEDLTKRS
Ga0318573_101737012	3300031564	Soil	MASWVKCTDLKAQTVWVNLDNVTVMTWRDIPQDTEIIFIGGGQVIVRERPENLTKRS
Ga0318573_106355961	3300031564	Soil	MASWVKCTDLKAQPVWVNLDNVTVMTWRDTPQDTEIIFIGGGQVIVRERPENLAKRS
Ga0310915_100714293	3300031573	Soil	MASWVKCTDLKAQTVWVNLDNVTVMTWRDAPQDTEIIFIGGGEVIVRERPEDLTKRS
Ga0310915_112428081	3300031573	Soil	MASWVKCTDLKAQPVWVNLDNVTVMTWRDTPQDTEIIFIGGGQVIVRERPENLTKRT
Ga0318542_101646491	3300031668	Soil	MASWVKCTDLKAQTVWVNLDNVTVMTWRDTPQDTEIIFIGGGEVIVRERPEDLTK
Ga0318561_105630841	3300031679	Soil	MASWVKCTDLKAQTVWVNLDNVTVMTWRDTPQDTEIIFVGGGQVIVRERPEDLTKR
Ga0318561_107143512	3300031679	Soil	MASWVKCTDLKAQTVWVNLDNVTVMTWRDIPQDTEIIFIGGGQVIVRE
Ga0310686_1036951532	3300031708	Soil	MAKWVKCTDDKGQTIWVNLDNVTNMTRHEKSRIYTEIVFVGGGQISAQERPEDIIHE
Ga0310686_1165685912	3300031708	Soil	MAKWVKCTDEKVKTVWMNLDNVTNMTRHEKPRTYTEIIFVGGGQIYAQERPEDLIHG
Ga0306917_111240842	3300031719	Soil	MASWVKCTDLKAQAVWVNLDNVTVMTWRDTPQDTEIIFIGGGEVIVRERPED
Ga0318501_107822621	3300031736	Soil	SRIVPVKESFRLSDLKAQTVWINLDNVTMTIWRDIPQDTEIIFIGGGQVIVREQPESLTKRS
Ga0318501_108347222	3300031736	Soil	MASWVKCTDLKSQTVWVNLDNVTVMTWRDTPQDTEIIFIGGGQVMV
Ga0306918_1000072312	3300031744	Soil	TELKAQPVWVNLDNVTVMTWRDTPQDTEIIFIGGGQVIVRERPENLTKRS
Ga0306918_108433823	3300031744	Soil	MASWVKCTDLKAQTVWVNLDNVTVMTWRDTPQDTEIIFIGGGEVIVRERPENLTKRS
Ga0318509_100957061	3300031768	Soil	MASWVKCTDLKAQAVWVNLDNVTVMTWRDTPQDTEIIFVGGGQVIVRERPEDLTKRS
Ga0318521_107986711	3300031770	Soil	MASWVKCTDLKAQPVWVNLDNVTVMTWRDTPQDTEIIFIGGGQVIVRE
Ga0318576_104089971	3300031796	Soil	MASWVKCTDLKAQPVWVNLDNVTVMTWRDTPQDTEIIFIGGGQVMVRERPENLTNRS
Ga0318523_103146281	3300031798	Soil	MASWVKCTDLKAQPVWVNLDNVTVMTWRDTPQDTEIIFIGGGQVIVRERPENLT
Ga0310917_101242163	3300031833	Soil	MASWVKCTDLKAQTVWVNLDNVTVMTWRDTPQDTEIIFIGGGEVIVHERPEDLTKRS
Ga0310917_110621512	3300031833	Soil	MASWVKCTDLKAQTVWVNLDNVTVMTWRDTPQDTEIIFVGGGQVIVRERPEDL
Ga0306919_104934582	3300031879	Soil	MASWVKWTDLKAQTVWVNLDNVTVMTWRDTPQDTEIIFIGGGEVIVREQPEDLTKRS
Ga0306919_114552882	3300031879	Soil	MASWVKCTDLKAQAVWVNLDNVTVMTWRDTPQDTEIIFIGGGEVIVRERPEDLTKRS
Ga0318544_100661352	3300031880	Soil	MASWVKCTDLKAQPVWVNLDNVTVMTWRDTPQDTEIIFIGGGQVIVRERPENLTKRS
Ga0306925_100027121	3300031890	Soil	EFPAMASWVKCTDLKAQPVWVNLDNVTVMTWRDTPQDTEIIFIGGGQVIVRERPENLTKR
Ga0306925_102996322	3300031890	Soil	MASWVKCTDLKAQTVWVNLDNVTVMTWRDTPQDTEIIFIGGGEVIVRERPENLTKRT
Ga0306925_103158281	3300031890	Soil	MASWVKCTDLKAQAVWVNLDNVTVMTWRDTPQDTEIIFVGGGQVIVRERPE
Ga0306925_109572712	3300031890	Soil	MASWVKCTDLKAQTVWVNLDNVTIMTWRDIPQDTEIIFVGGGQVLVREQPESLTKRS
Ga0318536_104395251	3300031893	Soil	MASWVKCTDLKAQTVWVNLDNVTVMTWRDTPQDTEIIFIGGGEVIVRERPEDLTKRS
Ga0306921_119985451	3300031912	Soil	MASWVKCTDLKAQAVWVNLDNVTVMTWRDTPQDTEIIFVGGGQVIVRERPEDLTKR
Ga0310912_114173241	3300031941	Soil	MASWVKCTDLKAQTVWVNLDNVTVMTWRDTPQDTEIIFVGGGQVIVRERPEDSTKRS
Ga0310916_111387652	3300031942	Soil	MASWVTCTDLKAQTVWVNLDNVTVMTWRDTPQDTEIIFIGGGEVIV
Ga0310910_101587582	3300031946	Soil	ASWVKCTDLKAQPVWVNLDNVTVMTWRDTPQDTEIIFIGGGQVIVRERPENLAKRS
Ga0318531_104879121	3300031981	Soil	MASWVTCTDLKAQTVWVNLDNVTVMTWRDTPQDTEIIFIGGGQVIVRERPENLTKRS
Ga0306922_101107523	3300032001	Soil	ASWVKCTDLKAQPVWVNLDNVTVMTWRDTPQDTEIIFIGGGQVIVRERPENLTKRS
Ga0318569_106167611	3300032010	Soil	MASWVKCTDLKAQPVWVNLDNVTVMTWRDTPQDTEIIFIGGGQVIV
Ga0310911_103969801	3300032035	Soil	MASWVKCTDLKAQPVWVNLDNVTVMTWRDTPQDTEIIFIGGGQVMVRE
Ga0318532_101773751	3300032051	Soil	KCTDLKAQTVWVNLDNVTVMTWRDTPRDTEIIFIGGGEVIVRERPEDLTKRS
Ga0318532_103130072	3300032051	Soil	MASWVKCTDLKAQTVWVNLDNVTVMTWRDTPRDTEIIFIGGGEVIVHERP
Ga0318532_103677311	3300032051	Soil	MASWVKSTDLKAQTVWVNLDNVTMMTWRDIPQDTEIIFIGGGQVIVLERPESLTERS
Ga0318505_102005682	3300032060	Soil	MASWVKCTDLKAQTVWVNLDNVTVMTWRDTPQDTEIIFIGGGQVMVRERPENLNNRS
Ga0318505_104830212	3300032060	Soil	MASWVKCTDLKAQTVWVNLDNVTVMTWRDTPQDTEIIFVGGGQVIVRERPEDS
Ga0306924_100181237	3300032076	Soil	GEFPAMASWVKCTDLKAQPVWVNLDNVTVMTWRDTPQDTEIIFIGGGQVIVRERPENLTKRS
Ga0306924_105544112	3300032076	Soil	MASWVKCTDLKAQTVWVNLDNVTVMTWRDTPQDTEIILIGGGEVIV
Ga0306924_117333392	3300032076	Soil	MASWVKCTDLKAQPVWVNLDNITVMTWRDTPQDTEIIFIGGGQVIVRE
Ga0318518_106325432	3300032090	Soil	MASWVKCTDLKAQPVWVNLDNVTVMTWRDTPQDTEIIFIGGGQVIVRERPENLTERS
Ga0307470_102255873	3300032174	Hardwood Forest Soil	MATWAKCTDTKGQTIWVNMDNVTTMMWRDQPQRGTEIILVGGGQVIVRDRPEDLTAFR
Ga0306920_1033906581	3300032261	Soil	GQGEFAAMASWVKCTDLKAQTVWVNLDNVTVMTWRDTPQDTEIIFIGGGQVIVRERPENLTKRS
Ga0335084_119720431	3300033004	Soil	TKGQTVWVNMDNVTTMMWREQPQRGTEIILVGGGQVIVRDRPEDMTAFR
Ga0310914_103036041	3300033289	Soil	MASWVKCSDLKAQTVWVNLDNVTMMTWRDIPQDTGIIFIGGGQVIVLERPESLTERS
Ga0318519_101400112	3300033290	Soil	MASWVKCTDLKAQTVWVNLDNVTVMTWRDTPQDTEIIFVGGGQVIVR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F034670

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences