Metagenome / Metatranscriptome Family F034690

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F034690
Family Type	Metagenome / Metatranscriptome
Number of Sequences	174
Average Sequence Length	49 residues
Representative Sequence	MQLKKVLGWAVVVFLAWYLFTQPAAAGNAVHNLLGLLQQAGSSIATFLNSL
Number of Associated Samples	129
Number of Associated Scaffolds	174

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	66.67 %
% of genes near scaffold ends (potentially truncated)	46.55 %
% of genes from short scaffolds (< 2000 bps)	81.61 %
Associated GOLD sequencing projects	118
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (82.759 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (35.058 % of family members)
Environment Ontology (ENVO)	Unclassified (33.908 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.299 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 60.76% β-sheet: 0.00% Coil/Unstructured: 39.24%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 174 Family Scaffolds
PF03703	bPH_2	34.48
PF00892	EamA	10.92
PF00383	dCMP_cyt_deam_1	6.32
PF13560	HTH_31	2.87
PF14437	MafB19-deam	2.30
PF13191	AAA_16	0.57
PF05119	Terminase_4	0.57
PF00145	DNA_methylase	0.57
PF07452	CHRD	0.57
PF01227	GTP_cyclohydroI	0.57
PF09661	DUF2398	0.57

COG ID	Name	Functional Category	% Frequency in 174 Family Scaffolds
COG3402	Uncharacterized membrane protein YdbS, contains bPH2 (bacterial pleckstrin homology) domain	Function unknown [S]	34.48
COG3428	Uncharacterized membrane protein YdbT, contains bPH2 (bacterial pleckstrin homology) domain	Function unknown [S]	34.48
COG0270	DNA-cytosine methylase	Replication, recombination and repair [L]	0.57
COG3747	Phage terminase, small subunit	Mobilome: prophages, transposons [X]	0.57

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	82.76 %
Unclassified	root	N/A	17.24 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	82.76 %
Unclassified	root	N/A	17.24 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	82.76 %
Unclassified	root	N/A	17.24 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	82.18 %
Unclassified	root	N/A	17.24 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	82.18 %
Unclassified	root	N/A	17.24 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	72.99 %
Unclassified	root	N/A	17.24 %

Name	Rank	Taxonomy	Distribution
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	24.71 %
Unclassified	root	N/A	17.24 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.30 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.24 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	8.05 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.30 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.24 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	5.75 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.30 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.57 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000789\|JGI1027J11758_12528097	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	594	Open in IMG/M
3300004101\|Ga0058896_1397905	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	793	Open in IMG/M
3300004139\|Ga0058897_10907506	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	664	Open in IMG/M
3300004281\|Ga0066397_10178541	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	502	Open in IMG/M
3300004633\|Ga0066395_10146519	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1192	Open in IMG/M
3300004633\|Ga0066395_10712131	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	597	Open in IMG/M
3300005167\|Ga0066672_10102906	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1745	Open in IMG/M
3300005187\|Ga0066675_11174292	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	570	Open in IMG/M
3300005332\|Ga0066388_100430637	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1962	Open in IMG/M
3300005332\|Ga0066388_101570647	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1156	Open in IMG/M
3300005332\|Ga0066388_102553043	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	930	Open in IMG/M
3300005332\|Ga0066388_106041752	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	611	Open in IMG/M
3300005406\|Ga0070703_10438154	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	576	Open in IMG/M
3300005435\|Ga0070714_101113484	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	770	Open in IMG/M
3300005436\|Ga0070713_100184210	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1878	Open in IMG/M
3300005436\|Ga0070713_100525469	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1118	Open in IMG/M
3300005436\|Ga0070713_101623359	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	628	Open in IMG/M
3300005467\|Ga0070706_100094579	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2773	Open in IMG/M
3300005468\|Ga0070707_100014830	Not Available	7306	Open in IMG/M
3300005533\|Ga0070734_10006255	All Organisms → cellular organisms → Bacteria	10073	Open in IMG/M
3300005537\|Ga0070730_10172333	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1456	Open in IMG/M
3300005541\|Ga0070733_10269036	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1123	Open in IMG/M
3300005541\|Ga0070733_10632841	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	718	Open in IMG/M
3300005587\|Ga0066654_10225172	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	982	Open in IMG/M
3300005713\|Ga0066905_100161469	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1628	Open in IMG/M
3300005764\|Ga0066903_101580844	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1242	Open in IMG/M
3300005764\|Ga0066903_103569876	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	838	Open in IMG/M
3300005764\|Ga0066903_107209659	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	575	Open in IMG/M
3300006028\|Ga0070717_10261114	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1532	Open in IMG/M
3300006059\|Ga0075017_100468233	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	953	Open in IMG/M
3300006172\|Ga0075018_10596662	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	587	Open in IMG/M
3300006176\|Ga0070765_100703951	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	954	Open in IMG/M
3300006797\|Ga0066659_11722368	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	529	Open in IMG/M
3300006800\|Ga0066660_11536250	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	525	Open in IMG/M
3300006804\|Ga0079221_10510345	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	783	Open in IMG/M
3300006804\|Ga0079221_10936532	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	641	Open in IMG/M
3300006871\|Ga0075434_100932592	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	883	Open in IMG/M
3300006893\|Ga0073928_11087681	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	542	Open in IMG/M
3300009038\|Ga0099829_10156534	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1822	Open in IMG/M
3300009792\|Ga0126374_11136042	Not Available	622	Open in IMG/M
3300010048\|Ga0126373_10352617	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1484	Open in IMG/M
3300010048\|Ga0126373_12913863	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	534	Open in IMG/M
3300010049\|Ga0123356_14011069	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	507	Open in IMG/M
3300010358\|Ga0126370_11485564	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	643	Open in IMG/M
3300010358\|Ga0126370_12420164	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	522	Open in IMG/M
3300010361\|Ga0126378_10293273	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1728	Open in IMG/M
3300010361\|Ga0126378_12885695	Not Available	548	Open in IMG/M
3300010366\|Ga0126379_10000112	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	37549	Open in IMG/M
3300010366\|Ga0126379_11651375	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	746	Open in IMG/M
3300010366\|Ga0126379_13204268	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	548	Open in IMG/M
3300010371\|Ga0134125_10348012	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1644	Open in IMG/M
3300010376\|Ga0126381_101256410	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1070	Open in IMG/M
3300010379\|Ga0136449_101035791	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1316	Open in IMG/M
3300010398\|Ga0126383_11486229	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	767	Open in IMG/M
3300010398\|Ga0126383_13496870	Not Available	513	Open in IMG/M
3300010859\|Ga0126352_1288099	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	867	Open in IMG/M
3300010937\|Ga0137776_1270631	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	5949	Open in IMG/M
3300010937\|Ga0137776_1886117	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3717	Open in IMG/M
3300011120\|Ga0150983_15229754	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	678	Open in IMG/M
3300011270\|Ga0137391_10973280	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	691	Open in IMG/M
3300012199\|Ga0137383_10392380	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1017	Open in IMG/M
3300012206\|Ga0137380_10449960	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1139	Open in IMG/M
3300012211\|Ga0137377_10051739	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	3798	Open in IMG/M
3300012971\|Ga0126369_10275880	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1669	Open in IMG/M
3300012971\|Ga0126369_10569090	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1200	Open in IMG/M
3300012971\|Ga0126369_12421032	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	611	Open in IMG/M
3300015372\|Ga0132256_100741162	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1099	Open in IMG/M
3300015373\|Ga0132257_101290080	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	927	Open in IMG/M
3300016270\|Ga0182036_10961210	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	703	Open in IMG/M
3300016294\|Ga0182041_11972307	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	543	Open in IMG/M
3300016341\|Ga0182035_10635064	Not Available	925	Open in IMG/M
3300016357\|Ga0182032_11282276	Not Available	632	Open in IMG/M
3300016371\|Ga0182034_10755165	Not Available	830	Open in IMG/M
3300016387\|Ga0182040_10171303	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1569	Open in IMG/M
3300016422\|Ga0182039_11109419	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	713	Open in IMG/M
3300016422\|Ga0182039_11840434	Not Available	555	Open in IMG/M
3300017924\|Ga0187820_1237262	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	581	Open in IMG/M
3300017932\|Ga0187814_10252040	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	669	Open in IMG/M
3300017942\|Ga0187808_10061791	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1599	Open in IMG/M
3300017974\|Ga0187777_10079031	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	2142	Open in IMG/M
3300017999\|Ga0187767_10100717	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	803	Open in IMG/M
3300018433\|Ga0066667_10217388	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1420	Open in IMG/M
3300020075\|Ga0206349_1622111	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	747	Open in IMG/M
3300020582\|Ga0210395_10989257	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	623	Open in IMG/M
3300021086\|Ga0179596_10601337	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	558	Open in IMG/M
3300021171\|Ga0210405_10390472	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1096	Open in IMG/M
3300021178\|Ga0210408_11405322	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	526	Open in IMG/M
3300021420\|Ga0210394_10000178	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	154048	Open in IMG/M
3300021420\|Ga0210394_10193828	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1772	Open in IMG/M
3300021420\|Ga0210394_10756938	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	850	Open in IMG/M
3300021432\|Ga0210384_10084165	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	2860	Open in IMG/M
3300021478\|Ga0210402_10099256	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	2612	Open in IMG/M
3300021560\|Ga0126371_10391011	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1531	Open in IMG/M
3300021560\|Ga0126371_10564572	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1287	Open in IMG/M
3300021560\|Ga0126371_10590204	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1260	Open in IMG/M
3300021560\|Ga0126371_10740206	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1130	Open in IMG/M
3300021560\|Ga0126371_13488715	Not Available	531	Open in IMG/M
3300021560\|Ga0126371_13520076	Not Available	528	Open in IMG/M
3300022506\|Ga0242648_1030101	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	748	Open in IMG/M
3300022509\|Ga0242649_1025390	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	733	Open in IMG/M
3300022522\|Ga0242659_1022510	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	979	Open in IMG/M
3300022533\|Ga0242662_10156550	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	693	Open in IMG/M
3300025910\|Ga0207684_10002034	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	20820	Open in IMG/M
3300025922\|Ga0207646_11106678	Not Available	697	Open in IMG/M
3300025928\|Ga0207700_10352379	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1282	Open in IMG/M
3300025929\|Ga0207664_10870820	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	809	Open in IMG/M
3300026551\|Ga0209648_10307235	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1129	Open in IMG/M
3300027646\|Ga0209466_1125825	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	521	Open in IMG/M
3300027787\|Ga0209074_10187406	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	769	Open in IMG/M
3300027826\|Ga0209060_10009093	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6156	Open in IMG/M
3300027857\|Ga0209166_10001337	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	20884	Open in IMG/M
3300027857\|Ga0209166_10439560	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	674	Open in IMG/M
3300027857\|Ga0209166_10683053	Not Available	517	Open in IMG/M
3300027874\|Ga0209465_10386828	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	700	Open in IMG/M
3300027889\|Ga0209380_10359774	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	854	Open in IMG/M
3300030622\|Ga0265391_10240613	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	573	Open in IMG/M
3300030969\|Ga0075394_11689065	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	544	Open in IMG/M
3300031090\|Ga0265760_10050806	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1248	Open in IMG/M
3300031543\|Ga0318516_10035048	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2668	Open in IMG/M
3300031543\|Ga0318516_10037107	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2600	Open in IMG/M
3300031543\|Ga0318516_10599436	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	629	Open in IMG/M
3300031544\|Ga0318534_10044373	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2475	Open in IMG/M
3300031544\|Ga0318534_10262545	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	996	Open in IMG/M
3300031544\|Ga0318534_10531891	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	670	Open in IMG/M
3300031546\|Ga0318538_10484040	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	671	Open in IMG/M
3300031546\|Ga0318538_10722846	Not Available	540	Open in IMG/M
3300031549\|Ga0318571_10002733	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3394	Open in IMG/M
3300031572\|Ga0318515_10072277	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1774	Open in IMG/M
3300031572\|Ga0318515_10527438	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	630	Open in IMG/M
3300031640\|Ga0318555_10133851	Not Available	1322	Open in IMG/M
3300031640\|Ga0318555_10156198	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1222	Open in IMG/M
3300031682\|Ga0318560_10531107	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	637	Open in IMG/M
3300031718\|Ga0307474_11078056	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	636	Open in IMG/M
3300031718\|Ga0307474_11482935	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	534	Open in IMG/M
3300031724\|Ga0318500_10007306	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	3668	Open in IMG/M
3300031763\|Ga0318537_10092853	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1116	Open in IMG/M
3300031768\|Ga0318509_10155896	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1261	Open in IMG/M
3300031770\|Ga0318521_10506520	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	726	Open in IMG/M
3300031781\|Ga0318547_10429475	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	813	Open in IMG/M
3300031781\|Ga0318547_10905212	Not Available	550	Open in IMG/M
3300031792\|Ga0318529_10260589	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	807	Open in IMG/M
3300031796\|Ga0318576_10337370	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	712	Open in IMG/M
3300031798\|Ga0318523_10187924	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1031	Open in IMG/M
3300031821\|Ga0318567_10442501	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	737	Open in IMG/M
3300031833\|Ga0310917_11216907	Not Available	500	Open in IMG/M
3300031879\|Ga0306919_10953562	Not Available	657	Open in IMG/M
3300031893\|Ga0318536_10176452	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1087	Open in IMG/M
3300031896\|Ga0318551_10146897	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1285	Open in IMG/M
3300031896\|Ga0318551_10696613	Not Available	588	Open in IMG/M
3300031910\|Ga0306923_12530700	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	505	Open in IMG/M
3300031942\|Ga0310916_11092707	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	663	Open in IMG/M
3300031946\|Ga0310910_10304285	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1255	Open in IMG/M
3300031959\|Ga0318530_10242005	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	743	Open in IMG/M
3300032009\|Ga0318563_10418386	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	725	Open in IMG/M
3300032025\|Ga0318507_10421201	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	581	Open in IMG/M
3300032042\|Ga0318545_10070252	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1204	Open in IMG/M
3300032043\|Ga0318556_10027275	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2621	Open in IMG/M
3300032043\|Ga0318556_10127509	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1304	Open in IMG/M
3300032059\|Ga0318533_10864788	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	663	Open in IMG/M
3300032063\|Ga0318504_10116850	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1207	Open in IMG/M
3300032066\|Ga0318514_10622839	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	574	Open in IMG/M
3300032076\|Ga0306924_10384351	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1608	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.70%
Host-Associated	Host-Associated	2.30%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	93.10%
Aquatic	Environmental → Aquatic	4.60%
Plants	Host-Associated → Plants	1.72%
Arthropoda	Host-Associated → Arthropoda	0.57%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	93.10%
Freshwater	Environmental → Aquatic → Freshwater	1.72%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.72%
Sediment	Environmental → Aquatic → Sediment	1.15%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.15%
Digestive System	Host-Associated → Arthropoda → Digestive System	0.57%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.57%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	74.71%
Loam	Environmental → Terrestrial → Soil → Loam	17.24%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.72%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.72%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.15%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.15%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	0.57%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.57%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.57%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	44.25%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.14%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.34%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.90%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.60%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.72%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.72%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment	1.15%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.15%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.15%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.57%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	0.57%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.57%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	35.06%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	13.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.47%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	7.47%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.75%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	4.60%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.45%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.72%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.72%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment	1.15%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.15%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.15%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.15%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.15%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.15%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.15%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.57%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.57%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.57%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.57%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.57%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	0.57%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.57%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.57%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.57%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.57%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004101	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF228 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004139	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF230 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004281	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010049	Embiratermes neotenicus P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P3	Host-Associated	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010859	Boreal forest soil eukaryotic communities from Alaska, USA - C5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010937	Fumarole sediment microbial communities, Furnas, Sao Miguel, Azores. Combined Assembly of Gp0156138, Gp0156139	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017999	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300020075	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022506	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-26-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022509	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-27-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022522	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027646	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300030622	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO144-ARE044SO (Eukaryote Community Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300030969	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J11758_125280972	3300000789	Soil	MQXKKXXGWAVVVXLAWYLFTQPQAAGNAVHNLLNLLTQAGNSIATFLQSL*
Ga0058896_13979051	3300004101	Forest Soil	MQLKKVLGWAVVVFLAWYLFTQPAAAGNTVHNLLGLLQKAGGSIATFLNSL*
Ga0058897_109075061	3300004139	Forest Soil	LGWAVVVFLAWYLFTQPAAAGNAVHNLLGLLQQAGSSIATFLNSL*
Ga0066397_101785412	3300004281	Tropical Forest Soil	LKKVLGWAVVVFLAWYLFTKPQAAGNAVHGLFVLLQQAGNSIATFLQSL*
Ga0066395_101465192	3300004633	Tropical Forest Soil	MQLKKVLGWAVVVFLAWYLFTQPQAAGNAVHNLLNLLTQAGNSIATFLQSL*
Ga0066395_107121312	3300004633	Tropical Forest Soil	TMQLKKVLGWAVVVFLAWYLFTQPQAAGTAVHNLLNLLTQAGNSIATFLHSL*
Ga0066672_101029063	3300005167	Soil	MQIKKVAGWAVVVFLAWYLFTQPAAAGNAVHNLLGLLQQAGSSIATFLNSL*
Ga0066675_111742921	3300005187	Soil	ELTMQIKKVAGWAVVVFLAWYLFTQPAAAGNAVHNLLGLLQQAGSSIATFLNSL*
Ga0066388_1004306374	3300005332	Tropical Forest Soil	MQIKKVAGWAVVVFLAWYLFTQPTAAGNAVHNLLNLLQQAGSSIATFLSSI*
Ga0066388_1015706472	3300005332	Tropical Forest Soil	MQIKKVLGWAVVVFLAWYLFTQPQAAGNAVHNLLNLLTQAGNSIATFLQSL*
Ga0066388_1025530432	3300005332	Tropical Forest Soil	MQLKKVLGWAVVVFLAWYLFTQPQAAGTAVHNLLNLLTQAGNSIATFLHSL*
Ga0066388_1060417521	3300005332	Tropical Forest Soil	WAVVVFLAWYLFTKPQAAGNAVHGLFVLLQQAGNSIATFLQSL*
Ga0070703_104381541	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MQLKKVLGWAVVVFLAWYLFTQPQAAGNTVHNLLNLLQQAGSSVVTFLQSL*
Ga0070714_1011134841	3300005435	Agricultural Soil	AGWAVVVFLAWYLFTQPAAAGAAVHNLFGLLQQAGSSIATFLNSL*
Ga0070713_1001842102	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MDLKKVLGWAVVVFLAWYLFTKPQAAGNAVHNLLNLLTQAGNSIATFLQSL*
Ga0070713_1005254692	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MQIKKIAGWAVVVFLAWYLFTQPAAAGAAVHNLFGLLQQAGSSIATFLNSL*
Ga0070713_1016233592	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MQIKKIAGWAVVVFLAWYLFTQPAAAGNAVHNLLGLLQQAGSSIATFLNSL*
Ga0070706_1000945795	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MQIKKVVGWAIVVFVAWYLFTQPTGAGHAVHNLLTLLQQAGSSIATFLNSL*
Ga0070707_10001483017	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MNLKTIAGWAVLVFLGWYIFTQPQAAGAAAHSLLSALQQAGQSIASFLNSL*
Ga0070734_100062559	3300005533	Surface Soil	MQLKKVAGWAVVVFLAWYLFTQPAAAGNAVHNLLGLLQQAGSSIATFLNSL*
Ga0070730_101723331	3300005537	Surface Soil	MQLKKVVGWAVVVFLAWYLFTQPTGAGHAVHNLLGLLQQAGSSIATFLNSL*
Ga0070733_102690362	3300005541	Surface Soil	MQLKKVLGWAVVVFLAWYLFTQPAAAGNAVHNLLGLLQQAGSSIATFLNSL*
Ga0070733_106328411	3300005541	Surface Soil	MQIKKIVGWAVVIFLAWYLFTQPVGAGHAVQHLFGLLHQAGSS
Ga0066654_102251723	3300005587	Soil	WAVVVFLAWYLFTQPAAAGNAVHNLLGLLQQAGSSIATFLNSL*
Ga0066905_1001614694	3300005713	Tropical Forest Soil	MQIKKVLGWAVVVFLAWYLFTKPQAAGNAVHGLFVLLQQAGNSIATFLQSL*
Ga0066903_1015808441	3300005764	Tropical Forest Soil	MQLKKVLGWAVVVFLAWYLFTQPQAAGNAVHNLLNLLTQAGNSVVTFLRSL*
Ga0066903_1035698762	3300005764	Tropical Forest Soil	MNIKKIVQWAVVIFIAWYLITQPAAAGAFVHNILNLLKQAGTSIATFLNSI*
Ga0066903_1072096592	3300005764	Tropical Forest Soil	CTCVGELTMQLKKVAGWAVVVFLAWYLFTQPTAAGNAVHNLLNLLQQAGSSIATFLSSI*
Ga0070717_102611143	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MQIKKVAGWAVVVFLAWYLFTQPAAAGAAVHNLFGLLQQAGSSIATFLNSL*
Ga0075017_1004682332	3300006059	Watersheds	MQIKKIAGWAVVVFLAWYLFTQPAAAGNAVHNLFGLLQQAGSSIATFLNSL*
Ga0075018_105966622	3300006172	Watersheds	MQIKKIAGWAVVVFLAWYLFTQPAAAGNAVQHLFGLLQQAGSSIATFLNSL*
Ga0070765_1007039511	3300006176	Soil	WAVVVFLAWYLFTQPAAAGNTVHNLLGLLQKAGGSIATFLNSL*
Ga0066659_117223682	3300006797	Soil	QIQKVAGWAVVVLLAWYLFTQPAAAGNAVHNLLGLLQQGGSSIATFLNSL*
Ga0066660_115362501	3300006800	Soil	MQIKKVAGWAVVVFLAWYLFTQPAAAGNAVHNLLGLLQQAGS
Ga0079221_105103451	3300006804	Agricultural Soil	TMQIKKVAGWAVVVFLAWYLFTQPAAAGNAVHNLLGLLQQAGSSIATFLNSL*
Ga0079221_109365322	3300006804	Agricultural Soil	MQLKKVAGWAVVVFLAWYLFTQPTAAGNAVHNLLNLLQQAGSSIATFLSSI*
Ga0075434_1009325923	3300006871	Populus Rhizosphere	WAVVVFLAWYLFTQPTAAGNAVHNLLNLLQQAGSSIATFLSSI*
Ga0073928_110876812	3300006893	Iron-Sulfur Acid Spring	MQLKKVLGWAVVVFLAWYLFTQPAAAGTAVQHLLGLLKQAGSSVATFLNSL*
Ga0099829_101565343	3300009038	Vadose Zone Soil	MQIKKVLGWAVVVFLAWYLFTQPAAAGNAVHNLLKLLQQAGGSIATFLNSL*
Ga0126374_111360422	3300009792	Tropical Forest Soil	MQLKKIAGWAVVVFLAWYLFTQPTAAGNAVHNLLNLLQQAGSSIATFLSSI*
Ga0126373_103526172	3300010048	Tropical Forest Soil	MKKIVGWVVVVFLAWYLITQPTAAGHAVHNLFSLLQHAGSSIATFLNSL*
Ga0126373_129138632	3300010048	Tropical Forest Soil	MNIKKIVQWAVVIFIAWYLITQPAAAGAFVHNILNLLKQAGTSIATFLNSR*
Ga0123356_140110692	3300010049	Termite Gut	MQLKKIVGWAVVVFLAWYLILQPASAGHVVHSLFGLLQHAGSSIATFLNSL*
Ga0126370_114855641	3300010358	Tropical Forest Soil	MQLKKVLGWAAVVFVAWYLFTQPVAAGAAVHNLLNLLQQAGTS
Ga0126370_124201641	3300010358	Tropical Forest Soil	MQAKKIAGWAVVVFLAWYLFTQPAAAGNAVHNLLNLLQQAGSSIATFLSSI*
Ga0126378_102932733	3300010361	Tropical Forest Soil	MQIKKVLGWAVVVFLAWYLFTQPQAAGSAVHNLLNLLTQAGNSIATFLQSL*
Ga0126378_107875472	3300010361	Tropical Forest Soil	MNIKKIAQWAVVIFLAWYLITQPAAAGAFVHNILNLLKQAGTSVATFLNSI*
Ga0126378_128856952	3300010361	Tropical Forest Soil	MAMQIKKIVGWAVVVFLAWYLITQPTAAGHAVHNLFDALQRAGSSVATFLNSL*
Ga0126379_1000011217	3300010366	Tropical Forest Soil	MGLKKVAGWAVVLFLAWYLFTQPAATGDAVHNLLNMAQQAGQSIATALSHI*
Ga0126379_116513751	3300010366	Tropical Forest Soil	MQLKKVLGWAVVVFLAWYLFTQPQAAGNAVHNLLNLLTQAGNS
Ga0126379_132042681	3300010366	Tropical Forest Soil	VSAWELAMQIKKVLGWAVVVFLAWYLFTQPQAAGTAVHNLLNLLTQAGNSIATFLHSL*
Ga0134125_103480123	3300010371	Terrestrial Soil	MQIKKVAGWAVVVFLAWYLFTQPAAAGTAAHHLLGVLRQAGGSIATFLNGL*
Ga0126381_1012564101	3300010376	Tropical Forest Soil	KKVLGWAVVVFLAWYLFTQPQAAGNAVHNLLNLLTQAGNSIATFLQSL*
Ga0136449_1010357912	3300010379	Peatlands Soil	MQIKKVLGWAVVVFLAWYLFTQPAAAGAAVQNLLGLLKQAGSSVATFLNSL*
Ga0126383_114862291	3300010398	Tropical Forest Soil	MQLKKVLGWSVVVFLAWYLFTQPTAAGNAVHNLLNLLQQAGRSIAT
Ga0126383_134968701	3300010398	Tropical Forest Soil	MQIKKILGWAVVVFLAWYLFTKPQAAGNAVHNLFNLLQQAGSSIATFLQSL*
Ga0126352_12880992	3300010859	Boreal Forest Soil	MQLKKVLGWAVVVFLAWYLFTQPTGAGHAVHNLLGLLQQAGSSIATFLNSL*
Ga0137776_12706317	3300010937	Sediment	MQIKKIAGWAVVVFLAWYLFTQPAAAGNTVQHLFGLLQQAGNSIATFLHSL*
Ga0137776_18861174	3300010937	Sediment	MNVKKIATWAVVVFLAWYLFTKPTAAGGAVHNLLNLLKDAGTSIATFLNSL*
Ga0150983_152297542	3300011120	Forest Soil	MQLKKVLGWAVVVFLAWYLFTQPAAAGTAVQHLLGLLKQAGSSIATFLNSL*
Ga0137391_109732802	3300011270	Vadose Zone Soil	MQIKKIAGWAVVVFLAWYLFTQPAAAGNAVQHLFGVLQQAGSSIATFLNSL*
Ga0137383_103923802	3300012199	Vadose Zone Soil	MQIKKVAGWAVVVFLAWYLFTQPAAAGNAVHNLLGLLKHAGSSIATFLNSL*
Ga0137380_104499601	3300012206	Vadose Zone Soil	MQMKKVLSWAVVVFLAWYLFTQPQAAGNAVHNLLGLLQQAGSSIATFLNSL*
Ga0137377_100517391	3300012211	Vadose Zone Soil	KKVLGWAVVVFLAWYLFTQPQAAGNAVHNLLNLLQQAGSSVATFLQSL*
Ga0126369_102758802	3300012971	Tropical Forest Soil	MQLKKVLGWAVVVFLAWYLFTQPAAAGNAVHNLLNLLTQAGNSVVTFLQSL*
Ga0126369_105690901	3300012971	Tropical Forest Soil	LTMQLKKVLGWAVVVFLAWYLFTQPQAAGNAVHNLLNLLTQAGNSIATFLQSL*
Ga0126369_124210321	3300012971	Tropical Forest Soil	DRCTCVGELTMQLKKVAGWAVVVFLAWYLFTQPTAAGNAVHNLLNLLQQAGSSIATFLSSI*
Ga0132256_1007411622	3300015372	Arabidopsis Rhizosphere	MQLKKVLGWAVVVFLAWYLFTQPHAAGNAVHNLLNLLTQAGNSIATFLQSL*
Ga0132257_1012900803	3300015373	Arabidopsis Rhizosphere	AVVVFLAWYLFTQPQAAGNAVHNLLNLLTQAGNSIATFLQSL*
Ga0182036_107225532	3300016270	Soil	FLAWYLITQPAAAGAFVHNVLNLLKQAGTSVATFLNSI
Ga0182036_109612102	3300016270	Soil	MQLKKVAGWAVVVFLAWYLFTQPTAAGNAVHNLLNLLQQAGSSIA
Ga0182041_119723071	3300016294	Soil	MQLKKVLGWAVVVFLAWYLFTQPAAAGNAVHTLLNLLTQAGNSIATFLQSL
Ga0182035_106350641	3300016341	Soil	VLGWAAVVFVAWYLLTQPVAAGAAVHNLLNLLQQAGTSIATFLHSL
Ga0182032_112822762	3300016357	Soil	MQLKKVLGWAAVVFVAWYLFTQPVAAGAAVHNLLNLLQQAGTSIATFLHSL
Ga0182034_107551652	3300016371	Soil	VLGWAAVVFVAWYLLTQPVAAGAAVHNILNLLQQAGTSIATFLHSL
Ga0182040_101713032	3300016387	Soil	MQLKKVPGWAVVVFLAWYLFTQPAAAGNAVHNLLNLLTQAGNSVVTFLQSL
Ga0182039_111094192	3300016422	Soil	TMQLKKVLGWAVVVFLAWYLFTQPAAAGNAVHNLLNLLTQAGNSIATFLQSL
Ga0182039_118404341	3300016422	Soil	MQLKKVAGWAVVVFLAWYLFTQPAAAGAAVHNLLNLLQQAGSSIATFLSSI
Ga0187820_12372622	3300017924	Freshwater Sediment	KIAGWAVVGLLAWYLFTQPAGASNAVHNILNLLKQAGTSIATFLNSL
Ga0187814_102520401	3300017932	Freshwater Sediment	MQIKKVLGWAVVVFLAWYLFTQPAAAGNAVHNLLGLLQQAGSSIATFLNSL
Ga0187808_100617912	3300017942	Freshwater Sediment	MQIKKIVQWAVVIFLAWYLITQPAAAGAAVHNLLNLLKQAGTSVATFLNSL
Ga0187777_100790314	3300017974	Tropical Peatland	VVVVFLAWYLFTQPTAAGHAVHNLFGLLQQAGNSVATFLNSL
Ga0187767_101007172	3300017999	Tropical Peatland	MQLKKIVGWVVVVFLAWYLFTQPTAAGHAVHNLFGLLQQAGNSVATFLNSL
Ga0066667_102173882	3300018433	Grasslands Soil	MQIKKVAGWAVVVFLAWYLFTQPAAAGNAVHNLLGLLQQAGSSIATFLNSL
Ga0206349_16221111	3300020075	Corn, Switchgrass And Miscanthus Rhizosphere	MDLKKVLGWAVVVFLAWYLFTKPQAAGNAVHNLLNLLTQAGNSIATFLQSL
Ga0210395_109892572	3300020582	Soil	MQIKKVLGWAVVVFLAWYLFTQPAAAGTAVQHLLGLLKQAGSSIATFLNSL
Ga0179596_106013372	3300021086	Vadose Zone Soil	MQIKKIAGWAVVVFLAWYLFTQPAAAGNAVQHLFGVLQQAGSSIATFLNSL
Ga0210405_103904721	3300021171	Soil	MQLKKVLGWAVVVFLAWYLFTQPAAAGNAVHNLLGLLQQAGSSIATFLNSL
Ga0210408_114053221	3300021178	Soil	WAVVVFLAWYLFTQPAAAGNAVQHLFGLLQQAGSSIATFLNSL
Ga0210394_10000178183	3300021420	Soil	MRIRSVLGWAIVVFLAWYLFTQPAAASHAVHSLLGLLEQAGGSIQTFVNGL
Ga0210394_101938282	3300021420	Soil	MQLKKVLGWAVVVFLAWYLFTQPAAAGTAVQHLLGLLKQAGSSIATFLNSL
Ga0210394_107569381	3300021420	Soil	WAVVVFLAWYLFTQPAAAGNAVHNLLGLLQQAGSSIATFLNSL
Ga0210384_100841653	3300021432	Soil	MQLKKVLGWAVVVFLAWYLFTQPAAAGNTVHNLLGLLQKAGGSIATFLNSL
Ga0210402_100992565	3300021478	Soil	MQLKKIAGWAVVVFLAWYLFTQPAAAGNAVQHLFGLLQQAGSSIATFLNSL
Ga0210402_108456782	3300021478	Soil	MNIKKIVQWAVVIFIAWYLITQPAAAGAFVHNILNLLKQAGTSVATFLNSI
Ga0126371_103910112	3300021560	Tropical Forest Soil	MQLKKVAGWAVVVFLAWYLFTQPTAAGNAVHNLLNLLQQAGSSIATFLNSI
Ga0126371_105645721	3300021560	Tropical Forest Soil	MQLKKVLGWAVVVFLAWYLFTQPQAAGTAVHNLLNLLTQAGNSIATFLQSL
Ga0126371_105902042	3300021560	Tropical Forest Soil	MNIKKIVQWAVVIFIAWYLITQPAAAGAFVHNILNLLKQAGTSIATFLNSI
Ga0126371_107402062	3300021560	Tropical Forest Soil	MQLKKVLGWAVVVFLAWYLFTQPQAAGTAVHNLLNLLTQAGNSIATFLHSL
Ga0126371_134887152	3300021560	Tropical Forest Soil	MQIKKVAGWAVVVFLAWYLFTQPTAAGNAVHNLLNLLQQAG
Ga0126371_135200762	3300021560	Tropical Forest Soil	MQLKKVLGWAVVVFLAWYLFTQPQAAGNAVHNLLNLLTQAGN
Ga0242648_10301011	3300022506	Soil	TMQIKKIAGWAVVVFLAWYLFTQPAAAGTAVQHLLGLLKQAGSSIATFLNSL
Ga0242649_10253902	3300022509	Soil	WTVVVFLAWYLFTQPAAAGNAVHNLLGLLQQAGSSIATFLNSL
Ga0242659_10225102	3300022522	Soil	VQLKKVLGWAVVVFLAWYLFTQPAAAGNAVHNLLGLLQQAGSSIATFLNSL
Ga0242662_101565502	3300022533	Soil	KKIAGWAVVVFLAWYLFTQPAAAGNAVHNLLGLLQQAGSSIATFLNSL
Ga0207684_1000203423	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MQIKKVVGWAIVVFVAWYLFTQPTGAGHAVHNLLTLLQQAGSSIATFLNSL
Ga0207646_111066783	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MNLKTIAGWAVLVFLGWYIFTQPQAAGAAAHSLLSALQQAGQSIASFLNSL
Ga0207700_103523791	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	LTMDLKKVLGWAVVVFLAWYLFTKPQAAGNAVHNLLNLLTQAGNSIATFLQSL
Ga0207664_108708201	3300025929	Agricultural Soil	IAGWAVVVFLAWYLFTQPAAAGAAVHNLFGLLQQAGSSIATFLNSL
Ga0209648_103072352	3300026551	Grasslands Soil	MQIKKVLGWAVVVFLAWYLFTQPAAAGNAVHNLLKLLQQAGGSIATFLNSL
Ga0209466_11258252	3300027646	Tropical Forest Soil	RELTMQIKKVLGWAVVVFLAWYLFTKPQAAGNAVHGLFVLLQQAGNSIATFLQSL
Ga0209074_101874061	3300027787	Agricultural Soil	MQIKKVAGWAVVVFLAWYLFTQPAAAGNAVHNLLGLLQQAGSS
Ga0209060_100090934	3300027826	Surface Soil	MQLKKVAGWAVVVFLAWYLFTQPAAAGNAVHNLLGLLQQAGSSIATFLNSL
Ga0209166_100013375	3300027857	Surface Soil	MQLKKVVGWAVVVFLAWYLFTQPTGAGHAVHNLLGLLQQAGSSIATFLNSL
Ga0209166_104395602	3300027857	Surface Soil	MNAKKIAGWAVVVFLAWYLFTKPTAAGGAVHNLLNLLKQAGSSIATFLNSL
Ga0209166_106830531	3300027857	Surface Soil	MQLKKVLGWAVVVFLAWYLFTQPTGAGHAVHNLLNLLQQAGSSIAT
Ga0209465_103868282	3300027874	Tropical Forest Soil	AVVVFLAWYLFTQPAAAGNAVHNLLNLLTQAGNSVVTFLQSL
Ga0209380_103597741	3300027889	Soil	MQLKKVLGWAVVVFLAWYLFTQPAAAGNTVHNLLGL
Ga0265391_102406132	3300030622	Soil	LTMQLKKVLGWAVVVFLAWYLFTQPAAAGTAVQHLLGLLKQAGSSIATFLNSL
Ga0075394_116890652	3300030969	Soil	MELKKVLGWAVVVFLAWYLFTQPTAAGNAVHNLLNLLQQAGSSIATFLSSI
Ga0170834_1036498012	3300031057	Forest Soil	MSLLFSYTKIVQWAVVIFIAWYLITQPAAAGAFVHNILNLLKQAGTSIATFLNSI
Ga0265760_100508062	3300031090	Soil	MQLKKVLGWTVVVFLAWYLFTQPAAAGNAVHNLLGLLQQAGSSIATFLNSL
Ga0318516_100350483	3300031543	Soil	MQLKKVLGWAVVVFLAWYLFTQPQAAGNTVHNLLNLLTQAGNSVVTFLQSL
Ga0318516_100371072	3300031543	Soil	MQLKKVLGWAVVVFLAWYLFTQPAAAGNAVHNLLNLLTQAGNSVVTFLQSL
Ga0318516_105994361	3300031543	Soil	MQLKKVLGWAVVVFLAWYLFTQPAAAGNAVHNLLNLLTQAGNSIATFLQSL
Ga0318534_100443733	3300031544	Soil	MQLKKVLGWAVVVFLAWYLFTQPVAAGAAVHNLLNLLQQAGTSIATFLNSL
Ga0318534_102625451	3300031544	Soil	MQLKKVLGWAVVVFLAWYLFTQPQAAGTAVHNLLN
Ga0318534_103021022	3300031544	Soil	MNIKKIAQWAVVIFLAWYLITQPAAAGAFVHNILNLLKQAGTSVATFLNSI
Ga0318534_105318911	3300031544	Soil	MQLKKVLGWAVVVFLAWYLFTQPQAAGNAVHNLLN
Ga0318538_104840401	3300031546	Soil	KMVAGWAVVVFLAWYLFTQPTAAGNAVHNLLNLLQQAGSSIATFLSSI
Ga0318538_107228461	3300031546	Soil	MQLKKVLGWAVVVFLAWYLFTQPAAAGNAVHNLLNLLQQAGSSIATFLSSI
Ga0318571_100027331	3300031549	Soil	MQLKKVLGWAVVVFLAWYLFTQPAAAGNAVHNLLNLLTQAGNSVVTFLQ
Ga0318515_100722774	3300031572	Soil	MQLKKVLGWAVVVFLAWYLFTQPQAAGTAVHNLLNLLTQAGNSVVTFLHSL
Ga0318515_105274381	3300031572	Soil	VGELTMQLKKVLGWAVVVFLAWYLFTQPAAAGNAVHNLLNLLQQAGSSIATFLSSI
Ga0318555_101338511	3300031640	Soil	MQLKKVLGWAAVVFVAWYLLTQPVAAGAAVHNLLNLLQQAGTSIATFLHSL
Ga0318555_101561983	3300031640	Soil	KKVLGWAVVVFLAWYLFTQPQAAGNAVHNLLNLLTQAGNSIATFLQSL
Ga0318560_105311071	3300031682	Soil	VLGWAVVVFLAWYLFTQPAAAGNAVHNLLNLLTQAGNSVVTFLQSL
Ga0307474_110780562	3300031718	Hardwood Forest Soil	MNVKKIAGWAVVVFLAWYLFTKPTAAGGAVHNLLNLLKQAGSSIATFLNSL
Ga0307474_114829351	3300031718	Hardwood Forest Soil	MQIKKIAGWAVVVFLAWYLFTQPAAAGNAVQHLFGLLQQAGSSIATFLNSL
Ga0318500_100073061	3300031724	Soil	ELTMQLKKVLGWAVVVFLAWYLFTQPQAAGNTVHNLLNLLTQAGNSVVTFLQSL
Ga0318537_100928531	3300031763	Soil	VGELTMQLKKVAGWAVVVFLAWYLFTQPTAAGNAVHNLLNLLQQAGSSIATFLSSI
Ga0318509_101558963	3300031768	Soil	MQLKKVAGWAVVVFLAWYLFTQPTAAGNAVHNLLN
Ga0318521_105065202	3300031770	Soil	TMQLKKVLGWAVVVFLAWYLFTQPAAAGNAVHNLLNLLTQAGNSVVTFLQSL
Ga0318547_104294752	3300031781	Soil	MQLKKVAGWAVVLFLAWYLFTQPAAAGNAVHNLLNLLQQAGSSIATFLSSI
Ga0318547_109052121	3300031781	Soil	MQLKKVLGWAAVVFVAWYLLTQPVAAGAAVHNILNLLQQAGTSI
Ga0318552_104400031	3300031782	Soil	LAMNIKKIAQWAVVIFLAWYLITQPAAAGAFVHNILNLLKQAGTSVATFLNSI
Ga0318529_102605891	3300031792	Soil	TMQLKKVLGWAVVVFLAWYLFTQPQAAGTAVHNLLNLLTQAGNSIATFLHSL
Ga0318548_105950352	3300031793	Soil	MNIKKIAQWAVVIFLAWYLITQPAAAGAFVHNVLNLLKQAGTSVATFLNSI
Ga0318576_103373701	3300031796	Soil	MQLKKVLGWAAVVFVAWYLLTQPVAAGAAVHNILNLLQQAGTS
Ga0318523_101879242	3300031798	Soil	MQMKKVLGWAVVVFLAWYLFTQPQAAGTAVHNLLNLLTQAGNSIATFLHSL
Ga0318567_104425012	3300031821	Soil	MQLKKVLGWAVVVFLAWYLFTQPQAAGTAVHNLLNL
Ga0310917_112169071	3300031833	Soil	MQLKKVLGWAVVVFLAWYLFTQPQAAGNTVHNLLNLLTQ
Ga0318527_104806221	3300031859	Soil	AMNIKKIAQWAVVIILAWYLITQPAAAGAFVHNILNLLKQAGTSVATFLNSI
Ga0306919_109535622	3300031879	Soil	MQLKKVAGWAVVVFLAWYLFTQPAAAGNAVHNLLNLLQQAGSSIATFLSSI
Ga0318536_101764523	3300031893	Soil	QLKKVLGWAVVVFLAWYLFTQPVAAGAAVHNLLNLLQQAGTSIATFLNSL
Ga0318551_101468973	3300031896	Soil	MQLKKVAGWAVVVFLAWYLFTQPTAAGNAVHNLLNLLQLAG
Ga0318551_106966131	3300031896	Soil	MQLKKVLGWAVVVFVAWYLFTQPVAAGAAVHNLLNLLQQAGTSI
Ga0306923_125307002	3300031910	Soil	KVLGWAVVVFLAWYLFTQPQAAGNAVHNLLNLLTQAGNSIATFLQSL
Ga0310916_107339702	3300031942	Soil	IKKIAQWAVVIFLAWYLITQPAAAGAFVHNILNLLKQAGTSVATFLNSI
Ga0310916_110927072	3300031942	Soil	MQLKKVLGWAVVVFLAWYLFTQPVAAGAAVHNLLNL
Ga0310910_103042851	3300031946	Soil	KKVAGWAVVVFLAWYLFTQPAAAGNAVHNLLNLLQQAGSSIASFLSSI
Ga0306926_118325492	3300031954	Soil	IVIFLAWYLITQPAAAGAFVHNVLNLLKQAGTSVATFLNSI
Ga0318530_102420051	3300031959	Soil	MQLKKVLGWAVVVFLAWYLFTQPQAAGNAVHNLLNLLTQAGNSI
Ga0318563_104183861	3300032009	Soil	MQLKKVLGWAVVVFLAWYLFTQPQAAGNAVHNLLNLLTQAG
Ga0318507_104212012	3300032025	Soil	KKVLGWAVVVFLAWYLFTQPAAAGNAVHNLLNLLTQAGNSIATFLQSL
Ga0318545_100702523	3300032042	Soil	QNDVPAEELTMQLKKVLGWAVVVFLAWYLFTQPQAAGNTVHNLLNLLTQAGNSVVTFLQS
Ga0318556_100272753	3300032043	Soil	MHLKKVLGWAVVVFLAWYLFTQPVAAGAAVHNLLNLLQQAGTSIATFLNSL
Ga0318556_101275091	3300032043	Soil	MQLKKVLGWAAVVFVAWYLLTQPVAAGAAVHNILNLLQQ
Ga0318570_105290461	3300032054	Soil	WAVVIFLAWYLITQPAAAGAFVHNILNLLKQAGTSVATFLNSI
Ga0318533_108647881	3300032059	Soil	MQLKKVLGWAVVVFLAWYLFTQPAAAGNAVHNLLNLLTQAGNSIATFL
Ga0318504_101168501	3300032063	Soil	QLKKVLGWAVVVFLAWYLFTQPAAAGNAVHNLLNLLTQAGNSVVTFLQSL
Ga0318514_106228391	3300032066	Soil	VLGWAVVVFLAWYLFTQPQAAGNAVHNLLNLLTQAGNSIATFLQSL
Ga0306924_103843514	3300032076	Soil	MQLKKVLGWAVVVFLAWYLFTQPQAAGTAVHNLLNLLTQ
Ga0318525_105638022	3300032089	Soil	MNIKKIAQWAVVIFLAWYLITQPAAAGAFVHNVLNLIKQAGTSVATFLNSI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F034690

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences