Metagenome Family F034732

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F034732
Family Type	Metagenome
Number of Sequences	174
Average Sequence Length	48 residues
Representative Sequence	MRSPFVDSASFLSEPSSDAARRHSLVVGRLLLLALVTAVAASSAVLLAI
Number of Associated Samples	128
Number of Associated Scaffolds	174

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	56.90 %
% of genes near scaffold ends (potentially truncated)	33.91 %
% of genes from short scaffolds (< 2000 bps)	87.36 %
Associated GOLD sequencing projects	111
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (70.690 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (10.345 % of family members)
Environment Ontology (ENVO)	Unclassified (52.874 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (63.218 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 55.84% β-sheet: 0.00% Coil/Unstructured: 44.16%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.46
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.46
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 174 Family Scaffolds
PF08668	HDOD	20.11
PF02769	AIRS_C	12.07
PF12705	PDDEXK_1	1.72
PF13177	DNA_pol3_delta2	1.15
PF13091	PLDc_2	0.57
PF00528	BPD_transp_1	0.57
PF02132	RecR	0.57
PF13361	UvrD_C	0.57

COG ID	Name	Functional Category	% Frequency in 174 Family Scaffolds
COG0353	Recombinational DNA repair protein RecR	Replication, recombination and repair [L]	0.57

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	70.69 %
Unclassified	root	N/A	29.31 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	70.69 %
Unclassified	root	N/A	29.31 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	70.69 %
Unclassified	root	N/A	29.31 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	60.34 %
Unclassified	root	N/A	29.31 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	56.32 %
Unclassified	root	N/A	29.31 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.31 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	12.64 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.31 %
Burkholderiales genera incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis	5.75 %
Alcaligenaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae	0.57 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.31 %
Methylibium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Methylibium	2.30 %
Rhizobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter	1.72 %
Aquabacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium	1.72 %
Azohydromonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Azohydromonas	0.57 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.31 %
unclassified Aquabacterium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → unclassified Aquabacterium	1.72 %
unclassified Rhizobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter	1.72 %
unclassified Methylibium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Methylibium → unclassified Methylibium	0.57 %
Azohydromonas sediminis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Azohydromonas → Azohydromonas sediminis	0.57 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.31 %
Rhizobacter sp. Root404	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root404	1.72 %
Aquabacterium sp. J223	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → unclassified Aquabacterium → Aquabacterium sp. J223	1.72 %
Methylibium sp. YR605	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Methylibium → unclassified Methylibium → Methylibium sp. YR605	0.57 %
Azohydromonas sediminis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Azohydromonas → Azohydromonas sediminis	0.57 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.57 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2199352024\|deeps__Contig_65406	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1366	Open in IMG/M
3300004156\|Ga0062589_101316427	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	699	Open in IMG/M
3300004157\|Ga0062590_100470473	Not Available	1059	Open in IMG/M
3300004480\|Ga0062592_100924453	All Organisms → cellular organisms → Bacteria → Proteobacteria	789	Open in IMG/M
3300004633\|Ga0066395_10232581	All Organisms → cellular organisms → Bacteria	980	Open in IMG/M
3300004643\|Ga0062591_100543909	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1010	Open in IMG/M
3300005093\|Ga0062594_100078690	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1857	Open in IMG/M
3300005093\|Ga0062594_100405831	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1103	Open in IMG/M
3300005327\|Ga0070658_10028709	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Methylibium	4467	Open in IMG/M
3300005327\|Ga0070658_10208408	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1651	Open in IMG/M
3300005328\|Ga0070676_10004703	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Methylibium → unclassified Methylibium → Methylibium sp. YR605	7217	Open in IMG/M
3300005328\|Ga0070676_10030574	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3072	Open in IMG/M
3300005328\|Ga0070676_10052924	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2389	Open in IMG/M
3300005328\|Ga0070676_10220380	All Organisms → cellular organisms → Bacteria	1253	Open in IMG/M
3300005329\|Ga0070683_100165409	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2098	Open in IMG/M
3300005331\|Ga0070670_100036712	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	4216	Open in IMG/M
3300005331\|Ga0070670_100076351	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2879	Open in IMG/M
3300005331\|Ga0070670_100475280	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1109	Open in IMG/M
3300005331\|Ga0070670_101362665	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	650	Open in IMG/M
3300005333\|Ga0070677_10144588	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1100	Open in IMG/M
3300005333\|Ga0070677_10234124	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	904	Open in IMG/M
3300005333\|Ga0070677_10759131	Not Available	551	Open in IMG/M
3300005335\|Ga0070666_10095408	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2047	Open in IMG/M
3300005335\|Ga0070666_11181426	Not Available	570	Open in IMG/M
3300005338\|Ga0068868_100435476	All Organisms → cellular organisms → Bacteria	1138	Open in IMG/M
3300005338\|Ga0068868_100504922	All Organisms → cellular organisms → Bacteria	1060	Open in IMG/M
3300005338\|Ga0068868_100989064	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	769	Open in IMG/M
3300005339\|Ga0070660_100248272	All Organisms → cellular organisms → Bacteria	1451	Open in IMG/M
3300005344\|Ga0070661_100912301	Not Available	725	Open in IMG/M
3300005344\|Ga0070661_101917548	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → unclassified Aquabacterium → Aquabacterium sp. J223	504	Open in IMG/M
3300005355\|Ga0070671_100178045	All Organisms → cellular organisms → Bacteria	1800	Open in IMG/M
3300005356\|Ga0070674_100011903	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Methylibium	5318	Open in IMG/M
3300005365\|Ga0070688_100263778	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1231	Open in IMG/M
3300005366\|Ga0070659_101121803	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	694	Open in IMG/M
3300005438\|Ga0070701_10622353	Not Available	717	Open in IMG/M
3300005457\|Ga0070662_100954949	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	733	Open in IMG/M
3300005457\|Ga0070662_100979776	Not Available	723	Open in IMG/M
3300005459\|Ga0068867_100718833	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	883	Open in IMG/M
3300005530\|Ga0070679_100721188	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	940	Open in IMG/M
3300005535\|Ga0070684_100308542	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1453	Open in IMG/M
3300005539\|Ga0068853_101433616	Not Available	668	Open in IMG/M
3300005543\|Ga0070672_100572912	All Organisms → cellular organisms → Bacteria	982	Open in IMG/M
3300005547\|Ga0070693_100026963	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Methylibium	3107	Open in IMG/M
3300005547\|Ga0070693_100212131	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1264	Open in IMG/M
3300005564\|Ga0070664_101021223	Not Available	777	Open in IMG/M
3300005834\|Ga0068851_10796167	Not Available	587	Open in IMG/M
3300005995\|Ga0066790_10092960	Not Available	1296	Open in IMG/M
3300006046\|Ga0066652_100149445	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1957	Open in IMG/M
3300006163\|Ga0070715_10384353	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	776	Open in IMG/M
3300006173\|Ga0070716_100108925	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1713	Open in IMG/M
3300006237\|Ga0097621_101308663	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	685	Open in IMG/M
3300006237\|Ga0097621_102240564	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	523	Open in IMG/M
3300006358\|Ga0068871_100301890	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1406	Open in IMG/M
3300006881\|Ga0068865_101426602	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	619	Open in IMG/M
3300007076\|Ga0075435_100889451	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	776	Open in IMG/M
3300009094\|Ga0111539_10904373	All Organisms → cellular organisms → Bacteria	1027	Open in IMG/M
3300009098\|Ga0105245_12629223	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → unclassified Aquabacterium → Aquabacterium sp. J223	556	Open in IMG/M
3300009137\|Ga0066709_101992734	All Organisms → cellular organisms → Bacteria	805	Open in IMG/M
3300009148\|Ga0105243_11472803	All Organisms → cellular organisms → Bacteria → Proteobacteria	704	Open in IMG/M
3300009156\|Ga0111538_10920311	Not Available	1107	Open in IMG/M
3300009174\|Ga0105241_11431621	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	663	Open in IMG/M
3300009176\|Ga0105242_13089721	Not Available	516	Open in IMG/M
3300009553\|Ga0105249_10475317	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1292	Open in IMG/M
3300009553\|Ga0105249_10517005	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1241	Open in IMG/M
3300010037\|Ga0126304_11267663	Not Available	506	Open in IMG/M
3300010337\|Ga0134062_10272121	All Organisms → cellular organisms → Bacteria	794	Open in IMG/M
3300010361\|Ga0126378_10294726	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1724	Open in IMG/M
3300010371\|Ga0134125_10391947	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1540	Open in IMG/M
3300010400\|Ga0134122_11386603	Not Available	716	Open in IMG/M
3300010403\|Ga0134123_12228501	All Organisms → cellular organisms → Bacteria → Proteobacteria	610	Open in IMG/M
3300012509\|Ga0157334_1017711	Not Available	754	Open in IMG/M
3300012509\|Ga0157334_1049994	Not Available	574	Open in IMG/M
3300012904\|Ga0157282_10260508	Not Available	592	Open in IMG/M
3300012905\|Ga0157296_10283190	Not Available	572	Open in IMG/M
3300012910\|Ga0157308_10412590	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	527	Open in IMG/M
3300012914\|Ga0157297_10310429	Not Available	597	Open in IMG/M
3300012985\|Ga0164308_10229573	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1434	Open in IMG/M
3300012988\|Ga0164306_10657796	All Organisms → cellular organisms → Bacteria	828	Open in IMG/M
3300013104\|Ga0157370_10826894	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	842	Open in IMG/M
3300013296\|Ga0157374_10597125	Not Available	1114	Open in IMG/M
3300013306\|Ga0163162_10644467	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1183	Open in IMG/M
3300013306\|Ga0163162_12033214	Not Available	659	Open in IMG/M
3300013308\|Ga0157375_10258491	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1903	Open in IMG/M
3300013308\|Ga0157375_10628645	Not Available	1231	Open in IMG/M
3300013308\|Ga0157375_10754570	Not Available	1124	Open in IMG/M
3300014745\|Ga0157377_10787505	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	700	Open in IMG/M
3300014968\|Ga0157379_11448704	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	667	Open in IMG/M
3300014968\|Ga0157379_12580694	Not Available	509	Open in IMG/M
3300014969\|Ga0157376_10615905	Not Available	1082	Open in IMG/M
3300014969\|Ga0157376_12120572	Not Available	600	Open in IMG/M
3300015371\|Ga0132258_11217874	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1903	Open in IMG/M
3300015371\|Ga0132258_11956690	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1475	Open in IMG/M
3300015373\|Ga0132257_102503553	Not Available	670	Open in IMG/M
3300016270\|Ga0182036_10962736	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	702	Open in IMG/M
3300017792\|Ga0163161_10899337	Not Available	750	Open in IMG/M
3300017965\|Ga0190266_10652060	Not Available	648	Open in IMG/M
3300018476\|Ga0190274_10584548	Not Available	1139	Open in IMG/M
3300018481\|Ga0190271_10120442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2467	Open in IMG/M
3300018482\|Ga0066669_11925917	All Organisms → cellular organisms → Bacteria → Proteobacteria	551	Open in IMG/M
3300018920\|Ga0190273_12053728	Not Available	531	Open in IMG/M
3300019362\|Ga0173479_10824752	Not Available	516	Open in IMG/M
3300021082\|Ga0210380_10040984	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1991	Open in IMG/M
3300021082\|Ga0210380_10330221	Not Available	695	Open in IMG/M
3300021445\|Ga0182009_10007930	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3547	Open in IMG/M
3300021445\|Ga0182009_10254662	Not Available	872	Open in IMG/M
3300022756\|Ga0222622_10258964	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → unclassified Aquabacterium → Aquabacterium sp. J223	1182	Open in IMG/M
3300023264\|Ga0247772_1110111	Not Available	596	Open in IMG/M
3300025315\|Ga0207697_10043900	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1838	Open in IMG/M
3300025315\|Ga0207697_10164480	All Organisms → cellular organisms → Bacteria	969	Open in IMG/M
3300025893\|Ga0207682_10024606	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2385	Open in IMG/M
3300025903\|Ga0207680_10319949	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1085	Open in IMG/M
3300025905\|Ga0207685_10176206	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	988	Open in IMG/M
3300025907\|Ga0207645_10230207	All Organisms → cellular organisms → Bacteria → Proteobacteria	1223	Open in IMG/M
3300025911\|Ga0207654_10511376	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	849	Open in IMG/M
3300025919\|Ga0207657_10799388	Not Available	729	Open in IMG/M
3300025919\|Ga0207657_11331100	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	542	Open in IMG/M
3300025920\|Ga0207649_10235403	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1312	Open in IMG/M
3300025920\|Ga0207649_10244700	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1289	Open in IMG/M
3300025920\|Ga0207649_10486458	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	937	Open in IMG/M
3300025920\|Ga0207649_10846007	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	716	Open in IMG/M
3300025923\|Ga0207681_10345702	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1189	Open in IMG/M
3300025925\|Ga0207650_10025459	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	4215	Open in IMG/M
3300025925\|Ga0207650_10213436	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1550	Open in IMG/M
3300025931\|Ga0207644_10104952	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2128	Open in IMG/M
3300025931\|Ga0207644_10299113	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1296	Open in IMG/M
3300025939\|Ga0207665_10158160	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1628	Open in IMG/M
3300025940\|Ga0207691_10033112	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	4813	Open in IMG/M
3300025940\|Ga0207691_11427316	Not Available	568	Open in IMG/M
3300025941\|Ga0207711_11468876	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	625	Open in IMG/M
3300025945\|Ga0207679_10017366	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root404	4799	Open in IMG/M
3300025945\|Ga0207679_10789729	Not Available	865	Open in IMG/M
3300025961\|Ga0207712_10542964	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	999	Open in IMG/M
3300025986\|Ga0207658_10218858	All Organisms → cellular organisms → Bacteria	1601	Open in IMG/M
3300026023\|Ga0207677_10060364	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root404	2620	Open in IMG/M
3300026041\|Ga0207639_11030595	Not Available	771	Open in IMG/M
3300026078\|Ga0207702_10925879	All Organisms → cellular organisms → Bacteria → Proteobacteria	864	Open in IMG/M
3300026089\|Ga0207648_10681811	Not Available	951	Open in IMG/M
3300026142\|Ga0207698_10385100	All Organisms → cellular organisms → Bacteria	1335	Open in IMG/M
3300026142\|Ga0207698_11158852	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	787	Open in IMG/M
3300028380\|Ga0268265_10316384	All Organisms → cellular organisms → Bacteria	1411	Open in IMG/M
3300028587\|Ga0247828_10009765	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Azohydromonas → Azohydromonas sediminis	3500	Open in IMG/M
3300028587\|Ga0247828_10189212	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1064	Open in IMG/M
3300028596\|Ga0247821_11238721	Not Available	508	Open in IMG/M
3300028802\|Ga0307503_10206732	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	933	Open in IMG/M
3300028802\|Ga0307503_10751556	Not Available	552	Open in IMG/M
3300028889\|Ga0247827_10472366	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	778	Open in IMG/M
3300031170\|Ga0307498_10009491	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1904	Open in IMG/M
3300031226\|Ga0307497_10671033	Not Available	532	Open in IMG/M
3300031366\|Ga0307506_10092194	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	977	Open in IMG/M
3300031543\|Ga0318516_10189464	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1186	Open in IMG/M
3300031562\|Ga0310886_11100618	Not Available	513	Open in IMG/M
3300031572\|Ga0318515_10230460	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	993	Open in IMG/M
3300031680\|Ga0318574_10702081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	593	Open in IMG/M
3300031681\|Ga0318572_10660312	Not Available	623	Open in IMG/M
3300031765\|Ga0318554_10264126	Not Available	980	Open in IMG/M
3300031765\|Ga0318554_10639041	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	599	Open in IMG/M
3300031765\|Ga0318554_10694029	Not Available	571	Open in IMG/M
3300031781\|Ga0318547_10867560	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	563	Open in IMG/M
3300031846\|Ga0318512_10553057	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	585	Open in IMG/M
3300031852\|Ga0307410_10719265	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	843	Open in IMG/M
3300031896\|Ga0318551_10122578	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1401	Open in IMG/M
3300031913\|Ga0310891_10125757	All Organisms → cellular organisms → Bacteria	812	Open in IMG/M
3300031938\|Ga0308175_100261970	All Organisms → cellular organisms → Bacteria	1742	Open in IMG/M
3300031938\|Ga0308175_103091780	Not Available	517	Open in IMG/M
3300031939\|Ga0308174_10041623	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root404	3046	Open in IMG/M
3300031939\|Ga0308174_10105947	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2025	Open in IMG/M
3300031939\|Ga0308174_10191687	All Organisms → cellular organisms → Bacteria	1553	Open in IMG/M
3300031939\|Ga0308174_10224993	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1444	Open in IMG/M
3300031939\|Ga0308174_10637682	Not Available	884	Open in IMG/M
3300032001\|Ga0306922_10159110	Not Available	2418	Open in IMG/M
3300032068\|Ga0318553_10315735	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	818	Open in IMG/M
3300032074\|Ga0308173_11374723	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	662	Open in IMG/M
3300033550\|Ga0247829_10603026	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	913	Open in IMG/M
3300034125\|Ga0370484_0118711	Not Available	698	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	52.87%
Environmental	Environmental	47.13%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	52.87%
Terrestrial	Environmental → Terrestrial	45.40%
Aquatic	Environmental → Aquatic	1.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	44.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere	38.51%
Rhizoplane	Host-Associated → Plants → Rhizoplane	12.64%
Roots	Host-Associated → Plants → Roots	1.72%
Freshwater	Environmental → Aquatic → Freshwater	1.15%
Sediment	Environmental → Aquatic → Sediment	0.57%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.57%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	36.78%
Soil	Host-Associated → Plants → Rhizosphere → Soil	25.29%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.22%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	10.92%
Loam	Environmental → Terrestrial → Soil → Loam	6.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.72%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.72%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.15%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.15%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.57%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.57%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	25.29%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.52%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.22%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	10.92%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	8.62%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.47%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.32%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.45%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.72%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.72%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.15%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.57%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.57%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.57%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.57%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.57%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.34%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	9.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	8.62%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	8.05%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	7.47%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.32%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.02%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	4.02%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.02%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.45%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.45%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.30%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.72%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.72%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.72%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.72%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.72%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.15%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.15%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.15%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.15%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.15%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.15%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.57%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.57%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.57%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.57%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.57%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.57%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.57%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.57%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.57%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.57%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.57%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.57%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352024	Bare-fallow DEEP SOIL	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012509	Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.080610_6	Environmental	Open in IMG/M
3300012904	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S029-104C-1	Environmental	Open in IMG/M
3300012905	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2	Environmental	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300023264	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L151-409C-6	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028596	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031366	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_S	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031913	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300034125	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_tus_01_15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
deeps_01008170	2199352024	Soil	MRSPFVDSASFLSEGPPEPGLRAAGLSIRLLAFALVMAVAASSAVLIAM
Ga0062589_1013164272	3300004156	Soil	PVETAMRSPFVDSASFLSEPSSGAARRHSLVVGRLLMLALVMAVAASSAVLLAI*
Ga0062590_1004704733	3300004157	Soil	MRSPFVDSASFLSEPSSDAARRQSLVVSRLLMLALVTAVAASSAVLLAI*
Ga0062592_1009244531	3300004480	Soil	MRSPFVDSASFLSEPSSDAARRHSLVVGRLLMLALVMAVAASSAVLLAI*
Ga0066395_102325811	3300004633	Tropical Forest Soil	MRSPFVDSASFLSEGFDRVTRRGPSTIRLLAFALVTAVAASSAVLLAI*
Ga0062591_1005439091	3300004643	Soil	RPPAETAMRSPFVDSASFLSEPLSDAARRQSLVVSRLLMLALVTAVAASSAVLLAI*
Ga0062594_1000786902	3300005093	Soil	MRSPFVDSASFLSDPSSDAARRQSLVVSRLLLLALVTAVAASSAVLLAI*
Ga0062594_1004058312	3300005093	Soil	FVDSASFLSEGFAGAARRAPSTIRLLAFALVTAVAASSAVLLAI*
Ga0070658_100287095	3300005327	Corn Rhizosphere	MRSPFVDSASFLSEGMGAAARRAPSAIRLLAFALVTVVAASSAVLLAI*
Ga0070658_102084082	3300005327	Corn Rhizosphere	MRSPFVDSASFLSEPSSDAARRHSLVVGRLLLLALVTAVAASSAVLLAI*
Ga0070676_100047035	3300005328	Miscanthus Rhizosphere	MPSPFVDSASFLTEPSSDAARRHSLLVGRLLLLALMMAVAASSAVLLAF*
Ga0070676_100305742	3300005328	Miscanthus Rhizosphere	MRSPFVDSASFLSDRPRSSGPRQSIVVGRLLLFALVMAVAASSAVLLAI*
Ga0070676_100529243	3300005328	Miscanthus Rhizosphere	MRSPFVDSASFLSEGFAGAARRAPSTIRLLAFALVTAVAASSAVLLAI*
Ga0070676_102203802	3300005328	Miscanthus Rhizosphere	MRSPFVDSASFLSDPSADEGRRQSLVVGRLLMFALVVAVAASSAVLLAI*
Ga0070683_1001654092	3300005329	Corn Rhizosphere	MRSPFVDSASFLSEGFAGAARRAPFTIRLLAFALVTAVAASSAVLLAI*
Ga0070670_1000367124	3300005331	Switchgrass Rhizosphere	MRTPFFVDSASYLSEHSEGRSSLVVSRLLTLALVVAVAASSAVLIAI*
Ga0070670_1000763514	3300005331	Switchgrass Rhizosphere	MRSPFVDSASFLSEPLSDAARRQSLVVSRLLMLALVTAVAASSAVLLAI*
Ga0070670_1004752802	3300005331	Switchgrass Rhizosphere	MRSPFVDSASFLSEPSADVGPRHSLVVGRLLLLALVMAVAASSAVLLAI*
Ga0070670_1013626652	3300005331	Switchgrass Rhizosphere	MRSPFVDSASFLSETSRHARQSLVVGRLLLFALVIAVATSSAVLLAV*
Ga0070677_101445882	3300005333	Miscanthus Rhizosphere	MRSPFVDSASFLSDRPRNSGPRQSIVVGRLLLFALVMAVAASSAVLLAI*
Ga0070677_102341241	3300005333	Miscanthus Rhizosphere	SFLSDPSADEGRRQSLVVGRLLMFALVVAVAASSAVLLAI*
Ga0070677_107591311	3300005333	Miscanthus Rhizosphere	MRSPFVDSASFLSEPSPDAARRHSLVVSRLLLLALVMAVAASSAVLLAI*
Ga0070666_100954082	3300005335	Switchgrass Rhizosphere	MRSPFVDSASFLPEPSADDGPRQSLIVGRLLLFALVLAVAASSAVLLAI*
Ga0070666_111814262	3300005335	Switchgrass Rhizosphere	MRSPFVDSASFLSEPSSDAARRQSLVVSQLLMLALVTAVAASSAVLLAI*
Ga0068868_1004354762	3300005338	Miscanthus Rhizosphere	MQTPFVDSASYLPEHSERQSSLVATRLLMLALVVAVAASSAVLIAI*
Ga0068868_1005049222	3300005338	Miscanthus Rhizosphere	MRTPFFVDSASYLSGHSERRSSLVASRLLTLALVVAVAASSAVLIAI*
Ga0068868_1009890642	3300005338	Miscanthus Rhizosphere	FVDSASFLSAGFGGSGRRAAAGLRLLAFALVTVVAASSAVLIAI*
Ga0070660_1002482723	3300005339	Corn Rhizosphere	MRSPFVDSASFLSAGFGGSGRRAAAGLRLLAFALVTAVAASSAVLIAI*
Ga0070661_1009123012	3300005344	Corn Rhizosphere	MRSPFVDSASFLSEPSSDDARRHSLVVGRLLLLALVMAVAASSAVLLAI*
Ga0070661_1019175481	3300005344	Corn Rhizosphere	DSASFLSEPSSDAGPRQSLVVSRLLLLALVLAVAASSAVLLAI*
Ga0070671_1001780453	3300005355	Switchgrass Rhizosphere	MRSPFVDSDSFLSEGPLSGGRRGHRVGIRLLACALVIAVAASSAVLLAL*
Ga0070674_1000119032	3300005356	Miscanthus Rhizosphere	MPSPFVDSASFLTEPSSDAARRHSLLVGRLLLLALVMAVAASSAVLLAF*
Ga0070688_1002637782	3300005365	Switchgrass Rhizosphere	MRSPFVDSASFLSEPSSDAARRQSLVVSRLLLLALVTAVAASSAVLLAI*
Ga0070659_1011218032	3300005366	Corn Rhizosphere	AETAMPSPFVDSASFLTEPSSDAARRHSLLVGRLLLLALMMAVAASSAVLLAF*
Ga0070701_106223532	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MRSPFVDSASFLSAGFGGSGRRAAAGLRLLAFALVTVVAASSAVLIAI*
Ga0070662_1009549491	3300005457	Corn Rhizosphere	MQTPCVDSASYLPEHSERQSSLVATRLLMLALVVAVAASSAVLIAI*
Ga0070662_1009797761	3300005457	Corn Rhizosphere	MRTPFFVDSASYLSGHSERRSSLVASRLLTLALVVAVAASSA
Ga0068867_1007188331	3300005459	Miscanthus Rhizosphere	MRAPFFVDSASYLSEHSERRSSLVASRLLTLALVVAVAASSAVLIAI*
Ga0070679_1007211882	3300005530	Corn Rhizosphere	RSPFVDSASFLSEPSSDAARRHSLVVGRLLMLALVMAVAASSAVLLAI*
Ga0070684_1003085422	3300005535	Corn Rhizosphere	MRSPFVDSASFLSEPSSDAARRLSLVVGRLLMLALVMAVAASSAVLLAI*
Ga0068853_1014336162	3300005539	Corn Rhizosphere	MRSPFVDSASFLSDPSADESRRQSLVVGRLLMFALVVAVAASSAVLLAI*
Ga0070672_1005729122	3300005543	Miscanthus Rhizosphere	MRSPFVDSASLLSDPPSDARARHSLVVGRLLLLALVTAVAASSAVLLAI*
Ga0070693_1000269631	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MRSPFVDSASFLSEPSSGAARRHSLVVGRLLMLALVMAVAASSAVLLAI*
Ga0070693_1002121312	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	SASFLSEGFAGATRRMPTMIRLLAFALVTAVAASSAVLLAI*
Ga0070664_1010212232	3300005564	Corn Rhizosphere	MRSPFVDSASFLSDPSSDAARRQSLVVSRLLMLALVTAVAASSAVLLAI*
Ga0068851_107961671	3300005834	Corn Rhizosphere	MRFPFVDSASFLSGPSPDAARRHSLVVSRLLLLALVMAVAASSAVLLAI*
Ga0066790_100929603	3300005995	Soil	MRYPFVDSASFLSEGSRETVDPSAFRSSWLLALALVMAVATSSAVLLAL*
Ga0066652_1001494452	3300006046	Soil	MRSPFVDSASFLSEPSSDPRGRQSNAVGRLLLFALIVAVAASSAVLLAI*
Ga0070715_103843532	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MPSPFVDSASLLSERSSDAARRHSLVVGRLLFFALVMAVAASSAVLLAF*
Ga0070716_1001089251	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MRSPFVDSASFLSEPSSDAGRRQSNAVGRLLLFALVVAVAASSAVLLAI*
Ga0097621_1013086631	3300006237	Miscanthus Rhizosphere	SPFVDSASFLSEPSSDAARRHSLVVGRLLLLALVTAVAASSAVLLAI*
Ga0097621_1022405642	3300006237	Miscanthus Rhizosphere	FVDSASFLSEGMGAAARRAPSAIRLLAFALVTVVAASSAVLLAI*
Ga0068871_1003018902	3300006358	Miscanthus Rhizosphere	MPSPFVDSASLLSEPSSDAARRHSLVVGRLLMLALVMAVAASSAVLLAF*
Ga0068865_1014266022	3300006881	Miscanthus Rhizosphere	ERPPAETAMRSPFVDSASFLSEPLSDAARRQSLVVSRLLMLALVTAVAASSAVLLAI*
Ga0075435_1008894511	3300007076	Populus Rhizosphere	SEGFAGAARRAPSTIRLLAFALVTVVAASSAVLLAI*
Ga0111539_109043732	3300009094	Populus Rhizosphere	MPSPFVDSASFLTEPSSDAARRHSLLVGRLLLLALGMAVAASSAVLLAF*
Ga0105245_126292232	3300009098	Miscanthus Rhizosphere	AMRSPFVDSASFLSEPSSDAARRHSLVVGRLLMLALVMAVAASSAVLLAI*
Ga0066709_1019927342	3300009137	Grasslands Soil	MRSPFVNSASFLSEPSSDAGRRQSNAVGRLLLFALVVAVAASSAVLLAI*
Ga0105243_114728031	3300009148	Miscanthus Rhizosphere	MRSPFVDSASFLTEPSSDAARRHSLLVGRLLLLALMMAVAASSAVLLAF*
Ga0111538_109203112	3300009156	Populus Rhizosphere	MRFPFVDSASFLSGPSPDAARRHSLVVGRLLMLALVMAVAASSAVLLAI*
Ga0105241_114316212	3300009174	Corn Rhizosphere	SEGFAGAARRAPSTIRLLAFALVTAVAASSAVLLAI*
Ga0105242_130897211	3300009176	Miscanthus Rhizosphere	SAETAMRSPFVDSASFLSEPSSDAARRHSLVVGRLLLLALVTAVAASSAVLLAI*
Ga0105249_104753172	3300009553	Switchgrass Rhizosphere	MRSPFVDSASFLSEGFAGSARRAPSTIRLLAFALVTAVAASSAVLLAI*
Ga0105249_105170052	3300009553	Switchgrass Rhizosphere	MRSPFVDSASFLSEPSPDAARRHSLVVSRLLLLALVTAVAASSAVLLAI*
Ga0126304_112676631	3300010037	Serpentine Soil	MRSPFVDSASFLSEGPVETGRRESAISIRLLAFALVMVVAASSAVLLAI*
Ga0134062_102721212	3300010337	Grasslands Soil	MRSPFVDSASFLSEPSSDAVRHQSNAVSRLLLFALVVAVAASSAVLLAI*
Ga0126378_102947262	3300010361	Tropical Forest Soil	MHSPFVDSASFLSEGFDRVTRSTPSAIRLLAFALVTAVAASSAVLLAI*
Ga0134125_103919472	3300010371	Terrestrial Soil	MRSPFVDSASFLSEGFAGATRRMPTMIRLLAFALVTAVAASSAVLLAI*
Ga0134122_113866032	3300010400	Terrestrial Soil	MRSPFVDSASFLSEGFAGATRRMPAMIRLLAFALVTAVAASSAVLLAI*
Ga0134123_122285012	3300010403	Terrestrial Soil	VSPAPAETAMRSPFVDSASFLSDPSADEGRRQSLVVGRLLMFALVVAVAASSAVLLAI*
Ga0157334_10177112	3300012509	Soil	MRSPFVDSASFLPEPSPDDGPRQSLVVGRLLLFALVLAVAASSAVLLAI*
Ga0157334_10499942	3300012509	Soil	MRSPFVDSASFLSAGFGGSGRRAAAGLRLLAFALVTAVAASSAVLLAI*
Ga0157282_102605081	3300012904	Soil	MRSPFVDSASFLSEPSSDAARRHSLVVGRLLLLALVM
Ga0157296_102831902	3300012905	Soil	MRSPFVDSASFLSEPSSDAARRHSLVVGRLLLLALV
Ga0157308_104125902	3300012910	Soil	AMRSPFVDSASFLSEPSSDAARRQSLVVSRLLMLALVTAVAASSAVLLAI*
Ga0157297_103104292	3300012914	Soil	MRSPFVDSASFLSEPSSGAARRHSLVVGRLLLLALVTAVAASSAVLLAI*
Ga0164308_102295732	3300012985	Soil	MRSPFVDSASFLSEPSSDAARRESLVVSRLLLLALVTAVAASSAVLLAI*
Ga0164306_106577961	3300012988	Soil	MPSPFVDSASLLSEPSSDAARRHSLVVGRLLMLALV
Ga0157370_108268942	3300013104	Corn Rhizosphere	DSASFLSEGMGAAARRAPSAIRLLAFALVTVVAASSAVLLAI*
Ga0157374_105971252	3300013296	Miscanthus Rhizosphere	MQTPFVDSASYLPEHSERHSSLVATRLLMLALVVAVAASSAVLIAI*
Ga0163162_106444672	3300013306	Switchgrass Rhizosphere	MRSPFVDSASFLSAGFGGSGRRAAAGLRLLAFALVTVVAASSSVLIAI*
Ga0163162_120332141	3300013306	Switchgrass Rhizosphere	MRSPFVDSASFLSEPAPDAARRHSLVVSRLLLLALVMAVAASSAVLLAM*
Ga0157375_102584912	3300013308	Miscanthus Rhizosphere	MRSPFVDSASFLSECFAGAARRAPSTIRLLAFALVTAVAASSAVLLAI*
Ga0157375_106286451	3300013308	Miscanthus Rhizosphere	MRTRFFVDSASYLSEHSERRSSLVASRLLTLALVVAVAASSAVLIAI
Ga0157375_107545701	3300013308	Miscanthus Rhizosphere	MRSPFVDSASLLSDPPSDARARHSLVVGRLLLLALVTAVAASS
Ga0157377_107875051	3300014745	Miscanthus Rhizosphere	MRSPFVDSASFLSEPSSDAARRHSLVVSRLLLLALVTAVAASSAVLLAI*
Ga0157379_114487042	3300014968	Switchgrass Rhizosphere	RPAETAMRSPFVDSASLLSDPPSDARARHSLVVGRLLLLALVTAVAASSAVLLAI*
Ga0157379_125806941	3300014968	Switchgrass Rhizosphere	AATLPRVSSARHAETAMRSPFVDSASFLSDPSSDAARRQSLVVSRLLLLALVTAVAASSAVLLAI*
Ga0157376_106159051	3300014969	Miscanthus Rhizosphere	MRSPFVDSASFLSDPSSDAARRQSLVVSRLLLLAMVTAVAASSAGLLA
Ga0157376_121205722	3300014969	Miscanthus Rhizosphere	MRSPFVDSASFLSEPSSDAARRHSIVVGRLLLLALVTALAASSAVLLAI*
Ga0132258_112178742	3300015371	Arabidopsis Rhizosphere	MRSPFVDSASFLSAGFDGAARRAPSAIRLLAFALVTAVAASSAVLLAI*
Ga0132258_119566902	3300015371	Arabidopsis Rhizosphere	MRSPFVDSASFLSEPSADDGRRQSLVVGRLLMFALVVAVAASSAVLLAI*
Ga0132257_1025035531	3300015373	Arabidopsis Rhizosphere	MRSPFVDSASFLPEPSADDGPRQSLVVGRLLLFALVLAVAASSAVLLAI*
Ga0182036_109627362	3300016270	Soil	MRSPFVDSASFLSEGFDRVTRRGPSTIRLLAFALVTAVAASSAVLLAI
Ga0163161_108993372	3300017792	Switchgrass Rhizosphere	MRFPFVDSASFLSGPSPDAARRHSLVVSRLLLLALVMAVAASSAVLLAI
Ga0190266_106520602	3300017965	Soil	MRTPFVDSASYLPQHAERAPSLVASRLLMLALVVAVAASSAVLLAI
Ga0190274_105845482	3300018476	Soil	MRSPFVDSASFLSEPSSDAARRQSLVVSRLLLLALVTAVAASSAVLLAI
Ga0190271_101204422	3300018481	Soil	MRSPFVDSASFFSEPSSDAARRQSLVVSRLLLLALVTAVAASSAVLLAI
Ga0066669_119259171	3300018482	Grasslands Soil	VDSASFLSEPSSDARRRQSNAVGRLLLFALVVAVAASSAVLLAI
Ga0190273_120537281	3300018920	Soil	MRTPFVDSASFLSQRSSDAQPRQSLVVGRLLLFALVLAVAASSAVLLAM
Ga0173479_108247521	3300019362	Soil	MRSPFVDSASFLSEPAPDAARRHSLVVSRLLLLALVMAVAASSAVLLAI
Ga0210380_100409843	3300021082	Groundwater Sediment	MRSPFVDSASYLPEHAERRPSLVASRLLMLALVVAVAASSAVLLAI
Ga0210380_103302212	3300021082	Groundwater Sediment	MRSPFVDSASLLSEPSSDAARRHSLIVDRLLLLALVMAVAASSAVLLAI
Ga0182009_100079304	3300021445	Soil	MRSPFVDSASFLSEGMGAAARRAPSAIRLLAFALVTVVAASSAVLLAI
Ga0182009_102546622	3300021445	Soil	MRSPFVDSASSLSEGFNVSGRRTWTGIWLLAFALVTAVAASSAVLLAI
Ga0222622_102589642	3300022756	Groundwater Sediment	MRSPFVDSASFLSEPSSDAARRHSLVVGRLLLLALVTAVAASSAVLLAI
Ga0247772_11101112	3300023264	Plant Litter	MRSPFVDSASFLSEPSSDAARRQSLVVSRLLMLALVTAVAASSAVLLAI
Ga0207697_100439001	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MPSPFVDSASFLTEPSSDAARRHSLLVGRLLLLALMMAVAASSAVLLAF
Ga0207697_101644802	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MRSPFVDSASFLSDPSSDAARRQSLVVSRLLLLALVTAVAASSAVLLAI
Ga0207682_100246063	3300025893	Miscanthus Rhizosphere	MRSPFVDSASFLSDRPRNSGPRQSIVVGRLLLFALVMAVAASSAVLLAI
Ga0207680_103199492	3300025903	Switchgrass Rhizosphere	MRSPFVDSASFLPEPSADDGPRQSLIVGRLLLFALVLAVAASSAVLLAI
Ga0207685_101762062	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MPSPFVDSASLLSERSSDAARRHSLVVGRLLFFALVMAVAASSAVLLAF
Ga0207645_102302072	3300025907	Miscanthus Rhizosphere	MRSPFVDSASFLSDPSADEGRRQSLVVGRLLMFALVVAVAASSAVLLAI
Ga0207654_105113761	3300025911	Corn Rhizosphere	LSEGFAGAARRAPSTIRLLAFALVTAVAASSAVLLAI
Ga0207657_107993881	3300025919	Corn Rhizosphere	MRSPFVDSASFLSEPSSDAARRHSLVVGRLLLLALVTAVAASSAVL
Ga0207657_113311001	3300025919	Corn Rhizosphere	MRSPFVDSASFLSAGFGGSGRRAAAGLRLLAFALVTAVAASSAVLIAI
Ga0207649_102354032	3300025920	Corn Rhizosphere	MRSPFVDSASFLSEGFAGAARRAPFTIRLLAFALVTAVAASSAVLLAI
Ga0207649_102447002	3300025920	Corn Rhizosphere	SFLSEPSSGAARRHSLVVGRLLMLALVMAVAASSAVLLAI
Ga0207649_104864581	3300025920	Corn Rhizosphere	MRSPFVDSASFLSEPSSDDARRHSLVVGRLLLLALVMAVAASSAVLLAI
Ga0207649_108460072	3300025920	Corn Rhizosphere	MRSPFVDSASFLSEPSADVGPRHSLVVGRLLLLALVMAVAASSAVLLAI
Ga0207681_103457022	3300025923	Switchgrass Rhizosphere	MRSPFVDSASFLSEPSPDAARRHSLVVSRLLLLALVMAVAASSAVLLAI
Ga0207650_100254592	3300025925	Switchgrass Rhizosphere	MRTPFFVDSASYLSEHSEGRSSLVVSRLLTLALVVAVAASSAVLIAI
Ga0207650_102134362	3300025925	Switchgrass Rhizosphere	MRSPFVDSASFLSEPLSDAARRQSLVVSRLLMLALVTAVAASSAVLLAI
Ga0207644_101049523	3300025931	Switchgrass Rhizosphere	MRSPFVDSASILSEPSSDAARRHSLVVGRLLLLALVTAVAASSAVLLAI
Ga0207644_102991132	3300025931	Switchgrass Rhizosphere	MQTPFVDSASYLPEHSERQSSLVATRLLMLALVVAVAASSAVLIAI
Ga0207665_101581602	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	ETVMRSPFVDSASFLSEPSSDAGRRQSNAVGRLLLFALVVAVAASSAVLLAI
Ga0207691_100331123	3300025940	Miscanthus Rhizosphere	MRTPFFVDSASYLSGHSERRSSLVASRLLTLALVVAVAASSAVLIAI
Ga0207691_114273162	3300025940	Miscanthus Rhizosphere	MRSPFVDSASLLSDPPSDARARHSLVVGRLLLLALVTAVAASSAVLLAI
Ga0207711_114688762	3300025941	Switchgrass Rhizosphere	ASLLSDPPSDARARHSLVVGRLLLLALVTAVAASSAVLLAI
Ga0207679_100173663	3300025945	Corn Rhizosphere	MRSPFVDSASFLSEPSSDAARRHSLVVGRLLMLALVMAVAASSAVLLAI
Ga0207679_107897293	3300025945	Corn Rhizosphere	MRSPFVDSASFLSDPSSDAARRQSLVVSRLLMLALVTAVAASSAVLLAI
Ga0207712_105429642	3300025961	Switchgrass Rhizosphere	MRSPFVDSASFLSEGFAGSARRAPSTIRLLAFALVTAVAASSAVLLAI
Ga0207658_102188581	3300025986	Switchgrass Rhizosphere	MRSPFVDSASFLSDPSSDAARRQSLVVSRLLLLALVTA
Ga0207677_100603641	3300026023	Miscanthus Rhizosphere	PAETAMASPFVDSASFLTEPSSDAARRHSLLVGRLLLLALMMAVAASSAVLLAF
Ga0207639_110305952	3300026041	Corn Rhizosphere	MRSPFVDSASFLSDPSADESRRQSLVVGRLLMFALVVAVAASSAVLLAI
Ga0207702_109258791	3300026078	Corn Rhizosphere	MRAPFVDSDSFLSEGPLSGGRRGHRVGIRLLACALVIAVAASSAVLLAL
Ga0207648_106818111	3300026089	Miscanthus Rhizosphere	MRSPFVDSASFLSAGFGGSGRRAAAGLRLLAFALVTVVAASSAVLIAI
Ga0207698_103851001	3300026142	Corn Rhizosphere	MRSPFVDSASFLSEPSSDAARRHSLVVGRLLLLALVTAVAA
Ga0207698_111588522	3300026142	Corn Rhizosphere	ETSMRSPFVDSASFLSDRPRSSGPRQSIVVGRLLLFALVMAVAASSAVLLAI
Ga0268265_103163842	3300028380	Switchgrass Rhizosphere	MPSPFVDSASFLTEPSSDAARRHSLLVGRLLLLALVMAVAASSAVLLAF
Ga0247828_100097652	3300028587	Soil	MRSPFVDSASFLSEPSSDAARRHSLIVGRLLLLALVMAVAASSAVLLAI
Ga0247828_101892122	3300028587	Soil	MRFPFVDSASFLSGPSPDAARRHSLVVSRLLLLALVTAVAASSAVLLAI
Ga0247821_112387212	3300028596	Soil	MRSPFVDSDSFLSEGPLSGGRRGHRVGIRLLACALVIAVAASSAVLLAL
Ga0307503_102067322	3300028802	Soil	MRSPFVDSASFLSEPSSDATRRQSLVVSRLLLLALVTAVAASSAVLLAI
Ga0307503_107515561	3300028802	Soil	MRSPFVDSASFLSDPPSDARARHSLVVGRLLLLALVTAVAASSAVLLAI
Ga0247827_104723662	3300028889	Soil	SLERRPAEAAMRSPFVDSASFLSEPSSDAARRHSLIVGRLLLLALVMAVAASSAVLLAI
Ga0307498_100094913	3300031170	Soil	MRSPFVDSASFLSEPSSDAARRHSLVVARLLLLALVTAVAASSAVLLAI
Ga0307497_106710332	3300031226	Soil	MRSPFVDSASFLSEPSSDAARRHSLVVGRLLLLALVTAVAASSAVLL
Ga0307506_100921942	3300031366	Soil	MQTPFVDSASYLPEHSERQSSLVATRLLTLALVVAVAASSAVLIAI
Ga0318516_101894642	3300031543	Soil	LSEGFDRVTRSTPSAIRLLAFALVTAVAASSAVLLAI
Ga0310886_111006181	3300031562	Soil	MRSPFVDSASFLSEPSADAGPRHSLVVGRLLLLALVMAVAASSAVLLAI
Ga0318515_102304601	3300031572	Soil	FVDSASFLSEGFDRVTRSTPSAIRLLAFALVTAVAASSAVLLAI
Ga0318574_107020811	3300031680	Soil	PFVDSASFLSEGFDRVTRSTPSAIRLLAFALVTAVAASSAVLLAI
Ga0318572_106603122	3300031681	Soil	MRSPFVDSASFLSEGFDRVTRRGPSTILLLAFALVTAVAASSAVLLAI
Ga0318554_102641262	3300031765	Soil	MRSPFVDSASFVSEGFDLVTRRGPSTIRLLAFALVTAVAASSAVLLAI
Ga0318554_106390412	3300031765	Soil	SEGFDRVTRSTPSAIRLLAFALVTAIAASSAVLLAI
Ga0318554_106940292	3300031765	Soil	MHSPFVDSASFLSEGFERVARHGPATIRLLAFALVTAVAASSAILLAI
Ga0318547_108675601	3300031781	Soil	EGFDRVTRRGPSTIRLLAFALVTAVAASSAVLLAI
Ga0318512_105530572	3300031846	Soil	SEGFDLVTRRGPSTIRLLAFALVTAVAASSAVLLAI
Ga0307410_107192652	3300031852	Rhizosphere	MRSPFVDSASFLSEGPVERGRRASAVGIRLLAFALVMAVAASSAVLLAI
Ga0318551_101225781	3300031896	Soil	AAAIAMRSPFVDSASFVSEGFDLVTRRGPSTIRLLAFALVTAVAASSAVLLAI
Ga0310891_101257572	3300031913	Soil	MPSPFVDSASFLTEPSSDAARRHSLLVGRLLLLALMMAVAASSAVLLA
Ga0308175_1002619701	3300031938	Soil	MRSPFVDSASFLSPGPPERDHRAAAVSTRLLAFALVMAIAASSAVLIA
Ga0308175_1030917802	3300031938	Soil	MRSPFVDSASFLSERAPHTGPRQSLVVGRLLLLALVMAVAASSAVLLAI
Ga0308174_100416233	3300031939	Soil	AMRTPFVHSASYLSEPAERAPSLVTSRLLTFALVVAVAASSAVLIAI
Ga0308174_101059472	3300031939	Soil	MRSPFVDSASFLSRPSPEARSRQSPIAGRLLLFALVVAVAASSAVLLAI
Ga0308174_101916874	3300031939	Soil	MRTPFVDSASYLSEPAERAPSLVTSRLLTFALVVAVAASSAVLIAI
Ga0308174_102249932	3300031939	Soil	MRSPFVDSASFLSERAPDLGPRQSLVVGRLLMFALVLAVAASSAVLLAI
Ga0308174_106376822	3300031939	Soil	MPSPFVDSASFLSEPSPGEPRRHSLAVGRLLLLGLVMAVAASSAVLLAF
Ga0306922_101591102	3300032001	Soil	MRSPFVDSASFVSEGFDRVTRRGPSTIRLLAFALVTAVAASSAVLLAI
Ga0318553_103157352	3300032068	Soil	ASFLSEGFDRVTRRAPSTIRLLAFALVTAVAASSAVLLAI
Ga0308173_113747231	3300032074	Soil	FVDSASLLSERAPDARPRQSVVIGRLLLLALVMAVAASSAVLLAI
Ga0247829_106030261	3300033550	Soil	PSPFVDSASFLTEPSSDAARRHSLLVGRLLLLALMMAVAASSAVLLAF
Ga0370484_0118711_553_696	3300034125	Untreated Peat Soil	MRSPFVDSASFLSDRPTDAGSRHSTVVGRLLMLALVMAVAASSAVLLA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F034732

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences