Metagenome / Metatranscriptome Family F034981

Basic Information
Family ID	F034981
Family Type	Metagenome / Metatranscriptome
Number of Sequences	173
Average Sequence Length	61 residues
Representative Sequence	MVIHYPPARLRRNSDQPTAITDVLVATSGSSSRTGDIPLGTPTCSARSRQGRWALYP
Number of Associated Samples	119
Number of Associated Scaffolds	173

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	98.84 %
% of genes near scaffold ends (potentially truncated)	92.49 %
% of genes from short scaffolds (< 2000 bps)	97.11 %
Associated GOLD sequencing projects	118
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.13

Most Common Taxonomy
Group	Unclassified (71.098 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (34.682 % of family members)
Environment Ontology (ENVO)	Unclassified (38.728 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (31.214 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 0.00% Coil/Unstructured: 100.00%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 173 Family Scaffolds
PF13453	zf-TFIIB	37.57
PF00011	HSP20	16.76
PF01145	Band_7	3.47
PF02371	Transposase_20	0.58
PF02909	TetR_C_1	0.58
PF13610	DDE_Tnp_IS240	0.58
PF00440	TetR_N	0.58
PF13683	rve_3	0.58

COG ID	Name	Functional Category	% Frequency in 173 Family Scaffolds
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	16.76
COG1309	DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA	Transcription [K]	0.58
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.58

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.10 %
All Organisms	root	All Organisms	28.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.10 %
cellular organisms	root	All Organisms → cellular organisms	28.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.10 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	28.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.10 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	25.43 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.10 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	25.43 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.10 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	25.43 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.10 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	4.05 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	2.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.10 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	4.05 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	2.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.10 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	4.05 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	2.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.10 %
unclassified Nocardioides	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides	4.05 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	2.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.10 %
Nocardioides sp. LS1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. LS1	4.05 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	2.89 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664021\|ICCgaii200_c0953020	Not Available	502	Open in IMG/M
3300000858\|JGI10213J12805_10601438	Not Available	510	Open in IMG/M
3300005347\|Ga0070668_101601852	Not Available	597	Open in IMG/M
3300005518\|Ga0070699_100904606	Not Available	808	Open in IMG/M
3300006049\|Ga0075417_10339261	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	734	Open in IMG/M
3300006049\|Ga0075417_10411100	Not Available	671	Open in IMG/M
3300006196\|Ga0075422_10511760	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300006853\|Ga0075420_100911142	Not Available	756	Open in IMG/M
3300006854\|Ga0075425_101943660	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300006876\|Ga0079217_11075323	Not Available	597	Open in IMG/M
3300009098\|Ga0105245_11320826	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	770	Open in IMG/M
3300009156\|Ga0111538_11954030	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	738	Open in IMG/M
3300009797\|Ga0105080_1033661	Not Available	590	Open in IMG/M
3300009800\|Ga0105069_1032830	Not Available	585	Open in IMG/M
3300009809\|Ga0105089_1008790	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1218	Open in IMG/M
3300009809\|Ga0105089_1050520	Not Available	644	Open in IMG/M
3300009823\|Ga0105078_1046746	Not Available	567	Open in IMG/M
3300010029\|Ga0105074_1061199	Not Available	676	Open in IMG/M
3300010036\|Ga0126305_10396990	Not Available	909	Open in IMG/M
3300010036\|Ga0126305_10404152	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	901	Open in IMG/M
3300010036\|Ga0126305_10691075	Not Available	689	Open in IMG/M
3300010037\|Ga0126304_10785238	Not Available	645	Open in IMG/M
3300010037\|Ga0126304_10879839	Not Available	609	Open in IMG/M
3300010038\|Ga0126315_10526396	Not Available	756	Open in IMG/M
3300010038\|Ga0126315_11084754	Not Available	540	Open in IMG/M
3300010040\|Ga0126308_10681743	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	705	Open in IMG/M
3300010041\|Ga0126312_10915780	Not Available	639	Open in IMG/M
3300010042\|Ga0126314_10273751	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1201	Open in IMG/M
3300010042\|Ga0126314_10452464	Not Available	929	Open in IMG/M
3300010042\|Ga0126314_10549443	Not Available	840	Open in IMG/M
3300010042\|Ga0126314_10782986	Not Available	701	Open in IMG/M
3300010042\|Ga0126314_11023167	Not Available	614	Open in IMG/M
3300010044\|Ga0126310_10322085	Not Available	1073	Open in IMG/M
3300010078\|Ga0127487_102662	Not Available	529	Open in IMG/M
3300010078\|Ga0127487_146377	Not Available	617	Open in IMG/M
3300010333\|Ga0134080_10617924	Not Available	529	Open in IMG/M
3300010896\|Ga0138111_1021179	Not Available	581	Open in IMG/M
3300012199\|Ga0137383_11093891	Not Available	577	Open in IMG/M
3300012204\|Ga0137374_10048580	All Organisms → cellular organisms → Bacteria	4400	Open in IMG/M
3300012204\|Ga0137374_11302463	Not Available	501	Open in IMG/M
3300012210\|Ga0137378_10855513	Not Available	822	Open in IMG/M
3300012210\|Ga0137378_11378145	Not Available	619	Open in IMG/M
3300012355\|Ga0137369_10147419	All Organisms → cellular organisms → Bacteria	1872	Open in IMG/M
3300012355\|Ga0137369_10867428	Not Available	609	Open in IMG/M
3300012356\|Ga0137371_10417738	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. LS1	1039	Open in IMG/M
3300012356\|Ga0137371_10524032	Not Available	914	Open in IMG/M
3300012356\|Ga0137371_11124289	Not Available	590	Open in IMG/M
3300012358\|Ga0137368_10625705	Not Available	682	Open in IMG/M
3300012358\|Ga0137368_10772655	Not Available	597	Open in IMG/M
3300012360\|Ga0137375_10304108	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. LS1	1440	Open in IMG/M
3300012360\|Ga0137375_10409924	Not Available	1181	Open in IMG/M
3300012360\|Ga0137375_11156737	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300012371\|Ga0134022_1089634	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	798	Open in IMG/M
3300012380\|Ga0134047_1047816	Not Available	914	Open in IMG/M
3300012403\|Ga0134049_1150735	Not Available	623	Open in IMG/M
3300012532\|Ga0137373_10256013	Not Available	1411	Open in IMG/M
3300012939\|Ga0162650_100014747	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1063	Open in IMG/M
3300017997\|Ga0184610_1105309	Not Available	897	Open in IMG/M
3300017997\|Ga0184610_1298910	Not Available	530	Open in IMG/M
3300018000\|Ga0184604_10176425	Not Available	720	Open in IMG/M
3300018028\|Ga0184608_10479958	Not Available	533	Open in IMG/M
3300018031\|Ga0184634_10430343	Not Available	598	Open in IMG/M
3300018051\|Ga0184620_10006340	All Organisms → cellular organisms → Bacteria	2516	Open in IMG/M
3300018051\|Ga0184620_10221845	Not Available	632	Open in IMG/M
3300018052\|Ga0184638_1025482	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2114	Open in IMG/M
3300018056\|Ga0184623_10433614	Not Available	572	Open in IMG/M
3300018072\|Ga0184635_10388893	Not Available	530	Open in IMG/M
3300018081\|Ga0184625_10652679	Not Available	510	Open in IMG/M
3300018432\|Ga0190275_11764417	Not Available	697	Open in IMG/M
3300018469\|Ga0190270_10690475	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1011	Open in IMG/M
3300019233\|Ga0184645_1313149	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1093	Open in IMG/M
3300019254\|Ga0184641_1336821	Not Available	514	Open in IMG/M
3300019255\|Ga0184643_1194916	Not Available	582	Open in IMG/M
3300019259\|Ga0184646_1046341	Not Available	556	Open in IMG/M
3300019259\|Ga0184646_1051501	Not Available	772	Open in IMG/M
3300019269\|Ga0184644_1710279	Not Available	507	Open in IMG/M
3300019279\|Ga0184642_1519375	Not Available	521	Open in IMG/M
3300021073\|Ga0210378_10100406	Not Available	1128	Open in IMG/M
3300022195\|Ga0222625_1780012	Not Available	543	Open in IMG/M
3300022694\|Ga0222623_10411727	Not Available	513	Open in IMG/M
3300022694\|Ga0222623_10412746	Not Available	513	Open in IMG/M
3300022756\|Ga0222622_10756790	Not Available	708	Open in IMG/M
3300026653\|Ga0208846_102144	Not Available	567	Open in IMG/M
3300026672\|Ga0208214_104433	Not Available	546	Open in IMG/M
3300026686\|Ga0208213_101643	Not Available	801	Open in IMG/M
3300027006\|Ga0209896_1014167	Not Available	876	Open in IMG/M
3300027056\|Ga0209879_1021513	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. LS1	1070	Open in IMG/M
3300027209\|Ga0209875_1019181	Not Available	806	Open in IMG/M
3300027561\|Ga0209887_1016426	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. LS1	1835	Open in IMG/M
3300027577\|Ga0209874_1084854	Not Available	771	Open in IMG/M
3300027577\|Ga0209874_1088710	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	749	Open in IMG/M
3300027577\|Ga0209874_1151514	Not Available	522	Open in IMG/M
3300027809\|Ga0209574_10114057	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	785	Open in IMG/M
3300027949\|Ga0209860_1004348	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2005	Open in IMG/M
3300028708\|Ga0307295_10222678	Not Available	538	Open in IMG/M
3300028710\|Ga0307322_10099031	Not Available	748	Open in IMG/M
3300028711\|Ga0307293_10246337	Not Available	568	Open in IMG/M
3300028712\|Ga0307285_10075181	Not Available	869	Open in IMG/M
3300028718\|Ga0307307_10249833	Not Available	566	Open in IMG/M
3300028719\|Ga0307301_10080751	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1020	Open in IMG/M
3300028720\|Ga0307317_10050232	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1335	Open in IMG/M
3300028720\|Ga0307317_10143847	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	799	Open in IMG/M
3300028721\|Ga0307315_10243603	Not Available	563	Open in IMG/M
3300028771\|Ga0307320_10107437	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. LS1	1063	Open in IMG/M
3300028787\|Ga0307323_10163309	Not Available	805	Open in IMG/M
3300028791\|Ga0307290_10368733	Not Available	525	Open in IMG/M
3300028796\|Ga0307287_10278783	Not Available	632	Open in IMG/M
3300028807\|Ga0307305_10456986	Not Available	574	Open in IMG/M
3300028811\|Ga0307292_10178203	Not Available	867	Open in IMG/M
3300028811\|Ga0307292_10433527	Not Available	560	Open in IMG/M
3300028812\|Ga0247825_10559425	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	817	Open in IMG/M
3300028814\|Ga0307302_10480394	Not Available	616	Open in IMG/M
3300028819\|Ga0307296_10424383	Not Available	727	Open in IMG/M
3300028819\|Ga0307296_10572295	Not Available	618	Open in IMG/M
3300028819\|Ga0307296_10696872	Not Available	555	Open in IMG/M
3300028876\|Ga0307286_10149593	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	835	Open in IMG/M
3300028878\|Ga0307278_10188515	Not Available	920	Open in IMG/M
3300028878\|Ga0307278_10281020	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	737	Open in IMG/M
3300028880\|Ga0307300_10085300	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	937	Open in IMG/M
3300028884\|Ga0307308_10070315	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. LS1	1653	Open in IMG/M
3300030635\|Ga0247627_10062447	Not Available	845	Open in IMG/M
3300030831\|Ga0308152_104700	Not Available	738	Open in IMG/M
3300030831\|Ga0308152_106252	Not Available	674	Open in IMG/M
3300030903\|Ga0308206_1088912	Not Available	676	Open in IMG/M
3300030986\|Ga0308154_102681	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	944	Open in IMG/M
3300030986\|Ga0308154_108945	Not Available	637	Open in IMG/M
3300030987\|Ga0308155_1018506	Not Available	626	Open in IMG/M
3300030988\|Ga0308183_1157948	Not Available	563	Open in IMG/M
3300031092\|Ga0308204_10094342	Not Available	814	Open in IMG/M
3300031094\|Ga0308199_1032260	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	949	Open in IMG/M
3300031099\|Ga0308181_1025458	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	990	Open in IMG/M
3300031099\|Ga0308181_1150186	Not Available	545	Open in IMG/M
3300031100\|Ga0308180_1004927	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. LS1	1036	Open in IMG/M
3300031124\|Ga0308151_1035375	Not Available	568	Open in IMG/M
3300031124\|Ga0308151_1038035	Not Available	555	Open in IMG/M
3300031422\|Ga0308186_1003978	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1110	Open in IMG/M
3300031422\|Ga0308186_1006748	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	927	Open in IMG/M
3300031424\|Ga0308179_1011536	Not Available	871	Open in IMG/M
3300031424\|Ga0308179_1061166	Not Available	507	Open in IMG/M
3300031424\|Ga0308179_1063286	Not Available	501	Open in IMG/M
3300031548\|Ga0307408_102006647	Not Available	556	Open in IMG/M
3300031731\|Ga0307405_10818601	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	781	Open in IMG/M
3300031824\|Ga0307413_11226695	Not Available	653	Open in IMG/M
3300031824\|Ga0307413_12007387	Not Available	521	Open in IMG/M
3300031903\|Ga0307407_11299643	Not Available	571	Open in IMG/M
3300031995\|Ga0307409_102641724	Not Available	530	Open in IMG/M
3300032002\|Ga0307416_102194381	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	653	Open in IMG/M
3300032002\|Ga0307416_103770392	Not Available	507	Open in IMG/M
3300032004\|Ga0307414_11997071	Not Available	541	Open in IMG/M
3300032005\|Ga0307411_10609267	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	940	Open in IMG/M
3300032005\|Ga0307411_12131908	Not Available	525	Open in IMG/M
3300032005\|Ga0307411_12298267	Not Available	506	Open in IMG/M
3300032126\|Ga0307415_100891039	Not Available	819	Open in IMG/M
3300032126\|Ga0307415_101419757	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	661	Open in IMG/M
3300032126\|Ga0307415_102311931	Not Available	527	Open in IMG/M
3300032126\|Ga0307415_102385701	Not Available	520	Open in IMG/M
3300032126\|Ga0307415_102426740	Not Available	516	Open in IMG/M
3300033551\|Ga0247830_10876512	Not Available	715	Open in IMG/M
3300034172\|Ga0334913_145929	Not Available	506	Open in IMG/M
3300034447\|Ga0370544_14401	Not Available	611	Open in IMG/M
3300034448\|Ga0370540_00868	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1172	Open in IMG/M
3300034448\|Ga0370540_01703	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	975	Open in IMG/M
3300034448\|Ga0370540_07667	Not Available	641	Open in IMG/M
3300034644\|Ga0370548_002292	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2010	Open in IMG/M
3300034644\|Ga0370548_015760	Not Available	1098	Open in IMG/M
3300034644\|Ga0370548_029216	Not Available	891	Open in IMG/M
3300034644\|Ga0370548_030508	Not Available	878	Open in IMG/M
3300034644\|Ga0370548_139209	Not Available	518	Open in IMG/M
3300034680\|Ga0370541_006661	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1080	Open in IMG/M
3300034680\|Ga0370541_042938	Not Available	576	Open in IMG/M
3300034681\|Ga0370546_014453	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	980	Open in IMG/M
3300034681\|Ga0370546_023600	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	833	Open in IMG/M
3300034681\|Ga0370546_080936	Not Available	544	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	84.97%
Host-Associated	Host-Associated	15.03%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	71.68%
Plants	Host-Associated → Plants	15.03%
Aquatic	Environmental → Aquatic	13.29%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	71.10%
Rhizosphere	Host-Associated → Plants → Rhizosphere	14.45%
Sediment	Environmental → Aquatic → Sediment	8.09%
Freshwater	Environmental → Aquatic → Freshwater	5.20%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.58%
Phylloplane	Host-Associated → Plants → Phylloplane	0.58%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	60.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.87%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	8.09%
Sand	Environmental → Terrestrial → Soil → Sand	8.09%
Sediment	Environmental → Aquatic → Freshwater → Sediment	5.20%
Loam	Environmental → Terrestrial → Soil → Loam	2.31%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.58%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.58%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	0.58%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	56.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.87%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	8.09%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	8.09%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	5.20%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.73%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.16%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.16%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.58%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	0.58%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.58%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.58%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.58%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.58%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	0.58%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	34.68%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	9.83%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.25%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	8.67%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	8.09%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	6.36%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	5.20%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	4.05%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.47%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.73%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.16%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.16%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.58%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	0.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.58%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.58%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.58%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.58%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.58%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	0.58%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000858	Soil microbial communities from Great Prairies - Wisconsin Native Prairie soil	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009797	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_10_20	Environmental	Open in IMG/M
3300009800	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_30_40	Environmental	Open in IMG/M
3300009809	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_30_40	Environmental	Open in IMG/M
3300009823	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_40_50	Environmental	Open in IMG/M
3300010029	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_10_20	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010078	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010896	Grasslands soil microbial communities from Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012371	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012380	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012403	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012939	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t1i015	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300019233	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019254	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019255	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019259	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019269	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019279	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300022195	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300026653	Grasslands soil microbial communities from Nunn, Colorado, USA, that are Nitrogen fertilized - NN1105 (SPAdes)	Environmental	Open in IMG/M
3300026672	Grasslands soil microbial communities from Nunn, Colorado, USA, that are Nitrogen fertilized - NN1102 (SPAdes)	Environmental	Open in IMG/M
3300026686	Grasslands soil microbial communities from Nunn, Colorado, USA, that are Nitrogen fertilized - NN1097 (SPAdes)	Environmental	Open in IMG/M
3300027006	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027056	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027209	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_0_10 (SPAdes)	Environmental	Open in IMG/M
3300027561	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027577	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027809	Agave microbial communities from Guanajuato, Mexico - Mg.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300027949	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_40_50 (SPAdes)	Environmental	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028710	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028712	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_139	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028721	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300030635	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Bnb4 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030831	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_141 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030903	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_369 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030986	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_143 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030987	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_144 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030988	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_157 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031094	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_203 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031099	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_152 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031100	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_151 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031124	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_140 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031422	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_181 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031424	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_150 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300034172	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 9HMS	Environmental	Open in IMG/M
3300034447	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_119 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034448	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_115 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034644	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_123 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034680	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_116 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034681	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_121 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICCgaii200_09530201	2228664021	Soil	MVIHYPPARLRSNSDQPTAITNLLVTTSGSSYHTGDIPLGTPTCSARS
JGI10213J12805_106014381	3300000858	Soil	MVIHYPPARLRQNSDRPTAITNVLVATSGSSSRTGDIALGTPTCSARTRQGRWAL
Ga0070668_1016018521	3300005347	Switchgrass Rhizosphere	MVIHYPPERLRSNSDRPSAITDVLVATTGSSSTGEISLGAPTCSARTRHGRW
Ga0070699_1009046062	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MVIHYPAGRLGRNSDQPTAITNVLFATSGSSPHRTGDIPLGIPTCSARSRHGRWALYPNGDE
Ga0075417_103392613	3300006049	Populus Rhizosphere	MVIHYPPARLRHNSDRPTAITNVLVTTSESSYHTGEIPLGTPTCSARTR
Ga0075417_104111001	3300006049	Populus Rhizosphere	MVIHYPPERLRYNSDRPTAITNVLITGSGSSFTGEIPLGTPACSVRSRRGRWVLYPNGEEVVVVWPG
Ga0075422_105117602	3300006196	Populus Rhizosphere	MGIHCQPERLRHDSDQPTAITNVLVATSGSSYHTGDIPLGVPICSARSRQGRWALYPNGDEVMVVWPGGALV
Ga0075420_1009111421	3300006853	Populus Rhizosphere	MVIHYPPERLRHNSDQPTAITNVLVATSGSSSRTGDIPLGTPTCSARSRHGRWALYPNGDQVVVLW
Ga0075425_1019436603	3300006854	Populus Rhizosphere	MVIHYPPARLRDTSDQPTAISNVLVATSGSSYHTGDIPLGTPTCSARSR
Ga0079217_110753232	3300006876	Agricultural Soil	MVIYYPPARLRHNSDQPTAITDVLVATSGSSSRIGELPLGTPTCSARSRRGRWALYPHGD
Ga0105245_113208263	3300009098	Miscanthus Rhizosphere	MVIHYPPERLRSNSERPSAITDVLVTTTGSSSTGEISLGAPTCSARTRHG
Ga0111538_119540303	3300009156	Populus Rhizosphere	MVIHYPPARLRHNSDQPTALTDVLVATSGSSSRTGDIPLGTPTCSARSRQGRWALYPNG
Ga0105080_10336613	3300009797	Groundwater Sand	MVIHYPPEQLRYNSDQPTAITNVLVATSGSSSRSGEIPLGTPTCSARTRHGRWALHPHGT
Ga0105069_10328303	3300009800	Groundwater Sand	MVIHYPPARLRHNSDQPTAITNVLVATSGSSYRTGDIPLGTPTCSARSRQGRWALY
Ga0105089_10087902	3300009809	Groundwater Sand	MVIHYPPEQLRYNSDQPTAITNVLVATSGSSSRSGEIPLGTPTCSARTRHGRWALHPHGTEVIIV*
Ga0105089_10505202	3300009809	Groundwater Sand	MVIHYPPARLRYNSDQPTAITNVLVATSGSSYIGEIPLGISTCSVRTRRGRWALYLYGD*
Ga0105078_10467461	3300009823	Groundwater Sand	MVLHYQPERLRYNSDQPTAITNVLVATSGSSCRTGEIPLGTPTCSARTRQGRWALYPNGD
Ga0105074_10611991	3300010029	Groundwater Sand	MVIHYQPGRLRRNSDQPTAITNVLVATSGSSARTGDIPLGTPTCSARTRHGRWALYPHGDEAVVVWPGGALVGP
Ga0126305_103969902	3300010036	Serpentine Soil	MVIHYPPARLRHNSDQPTAITNVLVATSGSSSRTGEIPLGSPTCSARTRRGRWGLYPSGEEVVVVWPGGAVVG
Ga0126305_104041521	3300010036	Serpentine Soil	MVIHHPPARLRQNSDQPTAITDVLVATAGSSSRTGDIPLGTPTCSARSRQGRWALYPNG
Ga0126305_106910751	3300010036	Serpentine Soil	MVIHYPPERLRRNSDRPTAITDVLVTTSGSSHQSGEIPLGTPTCSASGRRGRWALYPSGEEVVVAW
Ga0126304_107852383	3300010037	Serpentine Soil	MVIHYPPVRLRSNSDQPAAITNLLVANSGSFSTGEIPLGTPTCSARTRHGRWALY
Ga0126304_108798391	3300010037	Serpentine Soil	MVIHHPPARLRQNSDQPTAITDVLVATAGSSSRTGDIPLGTPTCSARSRQGRWALYPNGDQVVVVWPG
Ga0126315_105263961	3300010038	Serpentine Soil	MVIHYPPERLRHNSDQPTAITSVLVATSGSSCRTGEIPLGTPTCSARSRRGRWALYPNGDEVV
Ga0126315_110847542	3300010038	Serpentine Soil	MVTHYPPARLRRNSDQPTAITNVLVATSGSSHRTGEIPLGTPTCSARSRQGRWGL
Ga0126308_106817433	3300010040	Serpentine Soil	MVIHYLPARLRHNSDQPTAITNVLVATSGSSSRTGEIPLGRPTCSARTRRGRWGLYPSGEEVVVVWPGG
Ga0126312_109157801	3300010041	Serpentine Soil	MVIHYPPERLRSNSDQPTAITNVLVATSGSSSHTGEIPLGTPTCSARSRRG
Ga0126314_102737511	3300010042	Serpentine Soil	MVIHYPPERLRRNSDRPTAITDVLVTTSGSSHQSGEIPLGTPTCSASGRRGRWALYPSGEEVVVAWPGGALTGLP
Ga0126314_104524642	3300010042	Serpentine Soil	MVIHYPPERLRSNSDQPTAITDVLVATSGSSNRTGEIPLGTPTCSARSRQGRWALYPNGDEVVVVWPGGAVVGP
Ga0126314_105494433	3300010042	Serpentine Soil	MVIHHPPARLRQNSDQPTAITDVLVATAGSSSRTGDIPLGTPTCSARSRQGRWALYPNGDQVVVVWP
Ga0126314_107829863	3300010042	Serpentine Soil	MVIHYQPERLRYNSDQPTAITNVLVATSGSSCRTGDLPLGTPTCSARTRHGRWALYPNGDEVVVVW
Ga0126314_110231673	3300010042	Serpentine Soil	MVIHYPPARLRYNSDRPTAITNVLLTTSGSSHTGEIPLGTPTCSARTRRGRWALYPNG
Ga0126310_103220851	3300010044	Serpentine Soil	MVIHYPPARLRRNSDQPTAITDVLVTTSGSSYRTGEIPLGTPTCSARSRQGRWALYPNGDQVVVVWP
Ga0127487_1026621	3300010078	Grasslands Soil	MVIHYPPAQLRRNSDQPTAITDVVVATSTSPSSYHTGDIPLGTPTCSARSRHGLWALYPHGE*
Ga0127487_1463771	3300010078	Grasslands Soil	MVIHYQPERLRYNSDQPTAITNVLVATSGSFSTGEIPLATPTCSARTRRGRWALYPSGEEVVVLWPGG
Ga0134080_106179241	3300010333	Grasslands Soil	MVTHYPPARLRRNSDQPTAITNVLLATPGSSHRTGEIPLGTPTCSARTRHGRWALYPNGDQA
Ga0138111_10211791	3300010896	Grasslands Soil	MVIHYQPGRLRRNSDQPTAITDVLVATSGSSHRTRDIPLGTPTCSARTRQGRWALYPNGHQVVVVWPG
Ga0137383_110938911	3300012199	Vadose Zone Soil	MVIHHQPGRLGRSSDQPTAITNVLAATSGSSHRTGDLPLGIPTCSARSRHGLWALYPNGA
Ga0137374_100485809	3300012204	Vadose Zone Soil	MVIHYEPARLRRNSDQPTAITDVLVASSASTFGTGDIPLGSPTCSARSLS*
Ga0137374_113024631	3300012204	Vadose Zone Soil	MVIHHKAGRLRRNSDRPTAITDVLVATSGSSHRTGDIPLGIPTCSARSRHGLWALYPNGPDVVVVWP
Ga0137378_108555131	3300012210	Vadose Zone Soil	MVIHYQPGRLRRNSDQPTAITNVPLATSGSSHRSGDIPLGIPTCSARSRHGLWA
Ga0137378_113781453	3300012210	Vadose Zone Soil	MVIHHPPVRLRRSSDQPTAITHALAATSGSSHRTGDLPLGIPTCSARSRHGLWALYP
Ga0137369_101474191	3300012355	Vadose Zone Soil	MVIHYQPGRLRRNSDQPTAITHALVATSGSSSRTGDIPLGIPTCSARSRHGLWALYPSGAEVVV
Ga0137369_108674283	3300012355	Vadose Zone Soil	MVIHYQPGRLRRNSDQPTAITNVLVATSGSSARTGDIPLGTPTCSVRTRHGRWALY
Ga0137371_104177383	3300012356	Vadose Zone Soil	MVIHHPPVRLRRSSDQPTAITHALAATSGSSHRTGDIPLGIPTCSARSRHGLWALYP
Ga0137371_105240323	3300012356	Vadose Zone Soil	MVIHYEPARLRRNSDQPTAITDVLVTASPSTSQTSYRTSDIPLGTPTCSARSRHGLWALYQAG
Ga0137371_111242893	3300012356	Vadose Zone Soil	MVIHYQPGRLRRNSDQPTAITNVLVATPGSSFRTGEIPLGAPTCSARTR
Ga0137368_106257051	3300012358	Vadose Zone Soil	MVIHYPPARLRRNSDRPTALTGVLLATQGSSYRSGEIPLGTPTCSARSRQG
Ga0137368_107726551	3300012358	Vadose Zone Soil	MVIHYQPGRLRRNSDRPTAIANVLVATSGSSARTGDIPLGTPTCSARTRHGRWALYPHGTEVV
Ga0137375_103041082	3300012360	Vadose Zone Soil	MVIHHPPGRLRRNSDQPTAITDVLAATRGSSHHTGDIPLGMPTCSARSR
Ga0137375_104099241	3300012360	Vadose Zone Soil	MVIHYQPGRLRRNSDQPTAIADVVVATSPSSYRTGDIPLGTPTCLARTRHGRWALYPHGTEGVVV*
Ga0137375_111567372	3300012360	Vadose Zone Soil	HYEPARLRRNSDQPTAITGVLVASSASTFGTGDIPLGSPTCSARSLS*
Ga0134022_10896342	3300012371	Grasslands Soil	MVIHYQPGRVRHTSDRPTAITNVLVATSPAAYRAGEIALGTPTCSARTRHGRWALYPNGDQA
Ga0134047_10478164	3300012380	Grasslands Soil	MVIHYPPARLRRNSDQPTAITDVVVATSTSPSSYHTGDIPLGTPTCSARSRHGLWALYPHGEEVIVVWPGVARRLGW*
Ga0134049_11507352	3300012403	Grasslands Soil	MVIPYQPERLRYNSDQPTAITNVLVATSGSSHRTGEIPLGTPTCSARTRRGRWGLYPHGDEV
Ga0137373_102560131	3300012532	Vadose Zone Soil	MVIHYQPGRLRRNSDQPTAITNVLVATSGSSHRTGDIPLGIPTCSARSRHGLWALYPNGAEVVVVWPG
Ga0162650_1000147471	3300012939	Soil	MVIHYPPARLRHNSDQPTAITDVLVATSGSSSRIGEIPLGTPTCSACSRRGRWALY
Ga0184610_11053093	3300017997	Groundwater Sediment	MVIHYPPERLRYNSDQPTAITDVLVATAGSSSHTGEIPLGTPACSARTRQGR
Ga0184610_12989101	3300017997	Groundwater Sediment	MVIHYQPGRFRRNSDQPTAIADVMVATSPSSHRTGDLRLGTPTCSARSRHGR
Ga0184604_101764251	3300018000	Groundwater Sediment	MVIHYPPARLRRNSDQPTAITDVLITGSGSSSRTGEIPLGTPTCSARSRHGRWALYPNGDQVVV
Ga0184608_104799581	3300018028	Groundwater Sediment	MVTHYPPARLRYNSDQPTAITDVLINRSGSSSRSGEIPLGTPTCSARTRQGRWALLPTTR
Ga0184634_104303432	3300018031	Groundwater Sediment	VIHHPPARLCQNSDQPTAITDVLITGSGSSSRTGDIPLGTPTCSARSRQGRWALYPNGDQVVVVWPGGALVGPA
Ga0184620_100063401	3300018051	Groundwater Sediment	MVIHYPPERLRSNGDRPSAITDVLVTTTGSSSTGEISLGAPTCSARTRHGRWALYPSGEE
Ga0184620_102218451	3300018051	Groundwater Sediment	MVLHDQPERLRHNSDQPTAITDVLVATSGSSSRTGDLPLGTPTCSARSRQGRWALYPNGDQVVVV
Ga0184638_10254821	3300018052	Groundwater Sediment	MVIHYPPARLRRNTDQPTAVTGALVATSASTFRTGEIPLGTPTCSARTRQGRW
Ga0184623_104336141	3300018056	Groundwater Sediment	MVIHYPPARLRRNSDQLTAITDVLITGSGSSSRIGEVPLGTPTCSARSRQGRWALYPNGDQVVVVWPGGAV
Ga0184635_103888931	3300018072	Groundwater Sediment	MVIHYPPERLRSNSDRPTAITNVLVATSGSSHQSGEIPLGTPTCSASTRRGRWALYPSGEEVVV
Ga0184625_106526791	3300018081	Groundwater Sediment	MVLHYQPERLRYTSDQPTAITDVLLNRSGSSDRSGEIPLGSPTCSARTRQGRWALYPNGDQV
Ga0190275_117644171	3300018432	Soil	MVIHYPPARLRHNSDQPTAITNVLVTTSGSSSRTGEIPLGTPTCSTRTRRGRW
Ga0190270_106904753	3300018469	Soil	MVIHYQPERLRHNSDQPTAITNVLVATSGSSSRTGEIPLGTPTCSARSRRGRWALYPNGDEVVVVWPGGALVG
Ga0184645_13131494	3300019233	Groundwater Sediment	MVIHYQPGRLRRNSDQPTAITNVLVATAGSSSRPGDLPLGTPTCSARSRQGRWALYPN
Ga0184641_13368211	3300019254	Groundwater Sediment	MVIHYPPARLRRNSDQPTAITDVLITGSGSSSRTGEIPLGTPTCSARSRQGRWALYPNGDQVVVV
Ga0184643_11949163	3300019255	Groundwater Sediment	MVIHYPPERLRHNSDRPTAITNVLVATSGSSHQTRDIPLGTPTCSARSR
Ga0184646_10463413	3300019259	Groundwater Sediment	MVIHYQPGRLRRNSDQPTAITNVLVATSGSSWRTSEIPLGTPTCSARTRHGR
Ga0184646_10515013	3300019259	Groundwater Sediment	VIHYPPARLRYNSDQPTAITNVLITASGSSHTGEIPLGTPTCSARTRRGRWALHPSGDQVVVLWPGGALAG
Ga0184644_17102791	3300019269	Groundwater Sediment	MVIHYPPPRLRHNSSDQPTAITNLLLTTSGSSTTGEIPLGTPTCSARSRQGRWALYPNGDQVLVVWPGGA
Ga0184642_15193752	3300019279	Groundwater Sediment	MVLHYPPARLRHNSDQPTAITDVLVATSGSSNTGEIPLGTPTCSARSRQGRWALYPNGDQVVVVW
Ga0210378_101004062	3300021073	Groundwater Sediment	MVLHYQPERLRYNSDQPTAITNVLVATSGSSCRTGEIPLGTPTCSARTRQGRWALLPTTR
Ga0222625_17800122	3300022195	Groundwater Sediment	MVIHYPPARLRHNSDQPTAITDVLVTTSGSSSRTGDIPLGTPTCSARSRQGRWALYPNGDQVVVVW
Ga0222623_104117272	3300022694	Groundwater Sediment	MVLHYQPERLRYTSDQPTAITDVLLNRSGSSDRSGEIPLGSPTCSARTRQGRWALYPNGDQVVVVWPGGALVG
Ga0222623_104127461	3300022694	Groundwater Sediment	MVIHYPPERLRHNSDRPTAITNVLISTSGSSRQSSEIPLGAPTCSASTRRGRWALYPNGE
Ga0222622_107567902	3300022756	Groundwater Sediment	MVIHYPPARLRHNSDQPTAITDVLVTTSGSSSRTGDIPLGTPTCSARSRQGRWALYPNGDQVVVVWP
Ga0208846_1021441	3300026653	Soil	MVIHYPPARLRSNSDQPTAITNVLVATSGSSHRTGEIPLGTPTCSARSRHGRWALYPSGEEVVVVWPGGAV
Ga0208214_1044331	3300026672	Soil	MVIHYPPAQLRRNSDQPTAITNVLVATSGSSHRTGDIPLGTPTCSART
Ga0208213_1016431	3300026686	Soil	MVLHYQPERLRYNSDQPTAITNVLVATSGSSHQTRDIPLGTPTCSARSRRGRWALYPN
Ga0209896_10141673	3300027006	Groundwater Sand	MVIHYQPGRLRRNSDQPTAITNVLVATSGSSARTGDIPLGTPTCSARSRHGRWA
Ga0209879_10215132	3300027056	Groundwater Sand	MVIHYQPERLRHNSDQPTAITNVLVTTSGSSHRTGDIPLGTPTCSARSRRGRWALYPHGDEVVVVWPGGAVVG
Ga0209875_10191811	3300027209	Groundwater Sand	MVIHYQPGRLRRNSDQPTAITDVLVTTSGSSYRTGDIPLGTPTCSARSRHGRWALY
Ga0209887_10164261	3300027561	Groundwater Sand	MVLHYQPERLRYNSDQPTAITDVLVATSGSSCRTGEIPLGTPTCSARTRQGRWALYPNGDQVVVVWPGGAMA
Ga0209874_10848542	3300027577	Groundwater Sand	MVIHYQPGRLRRNSDQPTAITDVLVATSGSSWRTGDIPLGTPTCSARSRHGRWALYPHG
Ga0209874_10887103	3300027577	Groundwater Sand	MVLHYQPERLRYNSDQPTAITDVLVATSGSSCRTGEIPLGTPTCSARTRQGRWALYPNGDEV
Ga0209874_11515142	3300027577	Groundwater Sand	MVIHYQPGRVRRNSDRPTAITGVLVATSGSSARTGDLPLGTPTCSARS
Ga0209574_101140571	3300027809	Agave	MVIHYPPARLRRNSDQPTAITNVLVATSGSSARTGDIPLGSPTCSARTGQGRWALYANGD
Ga0209860_10043481	3300027949	Groundwater Sand	MVIHYQPGRLRRNTDQPTAIADVLVATSPSSYRTGDIPLGTPTCSARTRHGRWALYP
Ga0307295_102226781	3300028708	Soil	MVIHYPPERLRSNSDRPSAITDVLVTTTGSSSTGEISLGAPTCSARTRHGRWALYPSGEEVVVVW
Ga0307322_100990313	3300028710	Soil	MVIHYSPARLRRNSDQPTAITNVLVATAGSSSRPGDLPLGTPTCSARSRQGRWALYPNGDQIVVVWPGGALAGPP
Ga0307293_102463371	3300028711	Soil	MVTHYPPARLRHNSSGQPTAITNVLLTTSGSSSTGEIPLGPPTYSARSRSGRWAL
Ga0307285_100751811	3300028712	Soil	MVIHYPPARLRRNSDQPTAITDVLINRSGSSSRSGEIPLGTPTCSARTRQGRWALLPTTR
Ga0307307_102498331	3300028718	Soil	MVTHYPPARLRHNSSGQPTAITNVLLTTSGSSSTGEIPLGPPTCSARSRRGRWALHASGDQVVVV
Ga0307301_100807513	3300028719	Soil	MVIHYPPPRLRHNSSDQPTAITNLLLTTSGSSSTAEIPLGTPTCSARSRHGRWALYPNGDQVVVLWPGGAL
Ga0307317_100502323	3300028720	Soil	MVTHYPPARLRHNSSGQPTAITNVLLTTSGSSSTGEIPLGPPTYSARSR
Ga0307317_101438473	3300028720	Soil	MVIHYPPARLRRNSDQPTAITDVLITGSGSSSRTGDIPLGTPTCSARTRQGRWALYP
Ga0307315_102436031	3300028721	Soil	HQPALLVLACPWRTPMVIHYPPARLRRNSDQPTAITDVLITGSGSSSRTGDIPLGTPTCSARTRQGRWALLPTTR
Ga0307320_101074373	3300028771	Soil	MVLHYQPERLRYNSDQPTAITDVLVATSGSSCRTGEIPLGTPTCSARSRHGRWAL
Ga0307323_101633091	3300028787	Soil	MVIHYPPARLRRNSDQPTAITDVLVATSGSSSRTGDIPLGTPTCSARSRQGRWALYPNGDQVL
Ga0307290_103687331	3300028791	Soil	VIHHPPARLRQNNDQPTAITNVLVATAGSSSRTGDIPLGTPTCSARSRHG
Ga0307287_102787833	3300028796	Soil	VIHHPPARLCQNSDQPTAITDVLITGSGSSSRTGDIPLGTPTCSARSRHAA
Ga0307305_104569861	3300028807	Soil	MVIHHPPARLRQNSDRPTAITDVLVATSGSSSRTGDLPLGTPTCSARSRQGRWALYP
Ga0307292_101782031	3300028811	Soil	MVIHYPPARLRRNSDQPTAITDVLVATSGSSSRTGDIPLGTPTCSARSRQGRWALYPNGDQVVVVWPGGALAGP
Ga0307292_104335272	3300028811	Soil	MVIHYSPARLRRNSDQPTAITNVLVATAGSSSRTGDIPLGIPTCSARSRHGRWALYPNGDQAVVV
Ga0247825_105594253	3300028812	Soil	MVIHYPPERLRSNSDRPSAITDVLVATTGSSSTGEISLGAPTCSARTRHGRWALYPSGEE
Ga0307302_104803942	3300028814	Soil	MVIHYEPARLRRNSDQPTAITGVLAATSASTYRTGDIPLGTPTSSARTRQGL
Ga0307296_104243833	3300028819	Soil	MVIHYPPARIRRNSDQPTAITDVLITGSGSSSRTGDIPLGTPTCSARSRQGRWALYPNG
Ga0307296_105722952	3300028819	Soil	MVTHYPPARLRHNSSGQPTAITNVLLTTSGSSSTGEIPLGPPTCSARSRRGRW
Ga0307296_106968722	3300028819	Soil	MVIHYPPARLRRNSDQPTAITDVLVATSGSSSRTGDIPLGTPTCSARSRQGRWALYP
Ga0307286_101495931	3300028876	Soil	MVIHYPPARLRRNSDQPTAITDVLITGLGSSSRTGDIPLGTPTCSARSRQGRWA
Ga0307278_101885151	3300028878	Soil	MVIHYEPARLRRNSDQPTAITGVLLATQGSSHRTGEIPLGTPTCSSRSRQGRWALYPNGAEVVVV
Ga0307278_102810201	3300028878	Soil	MVIHYPPARLRRNSDQPTAITDALVATSTSSYRTGDIPLGTPTCSARSRHGRWALYSNGDEAVVVWPGGALA
Ga0307300_100853003	3300028880	Soil	MVIHYPPERLRHNSDQPTAITNVLVTTAGSSHQTGEIPLGAPTCSASTHRGRWALYPNGDQVVVIWPGGALTGL
Ga0307308_100703153	3300028884	Soil	MVIHYQPARLRRNSDQPTALTNVLLASGTGEVPLGTPTCSARTRQGGWALYPNGAEVVAV
Ga0247627_100624471	3300030635	Soil	MVIHYQPERLRHNSDQPTAITDVLVATPGSSYDTGDIPLGTPTCSVRTRRGRWALYPNGDQVVVVWPGGAL
Ga0308152_1047001	3300030831	Soil	MVIHYPPARLRHNSDRPTAITNVLVATSGSSHQTRDIPLGTPTCSARSRRGRWALYPHGE
Ga0308152_1062522	3300030831	Soil	MVIHYPPARLRQNSDQPTAITDVLITGSGSSSRTGDIPLGIPTCSARSRQGRWALYPNGDQA
Ga0308206_10889121	3300030903	Soil	MVIHYPPERLRRNSDEPTAITNVLVATSGSSSRTGDIPLGTPTCSARTRQGRWAL
Ga0308154_1026811	3300030986	Soil	MVIHDQPERLRYNSDQPTAITNVLVTTAGSSHQTGEIPLGAPTCSASTHRGRWALYPNGDQVVVIWPG
Ga0308154_1089451	3300030986	Soil	MVTHYPPARLRYNSDQPTAITDVLINRSGSSSRTGEIPLGSPTCSARTRQGRWALYPNGDQVVVV
Ga0308155_10185061	3300030987	Soil	MVTHYPPARLRYNSDQPTAITDVLINRSGSSSRSGEIPLGSPTCSARSRQGRWALYPNGDQVVVLWPG
Ga0308183_11579481	3300030988	Soil	MVTHYPPARLRYNSDQPTAITDVLINRSGSSSRTGEIPLGSPTCSARSRQGRWALYPNGD
Ga0308204_100943422	3300031092	Soil	MVIHYPPERLRRNSDQPTAITNVLVATSGSSSRTGEIPLGTPTCSACSRQGRWALYP
Ga0308199_10322601	3300031094	Soil	MVIHYSPARLRRNSDQPTAITNVLVATAGSSSRTGDIPLGIPTCSARSRHGRWALYPNGDQAVVVWPGGA
Ga0308181_10254582	3300031099	Soil	MVIHYPPARLRYNSDQPTAITDVLVATSGSSSHTGDIPLGTPTCSARTRQGRWALYPWPD
Ga0308181_11501861	3300031099	Soil	MVIHYPPARFRHNSDQPTAITNVLVATSGSSYTGDIPLGTPTCSARTRRGRWAL
Ga0308180_10049273	3300031100	Soil	MVLHYPPARLRRNSDQPTAITDVLINRSGSSSRTGEIPLGSPTCSARTRQGRWALY
Ga0308151_10353752	3300031124	Soil	VIHHPPARLCQNSDQPTAITDVLITGSGSSSRTGDIPLGTPTCSARSR
Ga0308151_10380352	3300031124	Soil	MVIHYPPARLRHNSDRPTAITNVLVATSGSSHQTRDIPLGTPTCSARSRRGRWALYPHGEEVVVVWP
Ga0308186_10039781	3300031422	Soil	MVIHYPPERLRHNSDQPTAITNVLVTTAGSSHQTGEIPLGAPTCSASTHRGRWALYPNGDQVVVIWPGGALT
Ga0308186_10067481	3300031422	Soil	MVIHYPPERLRSNGDRPSAITDVLVTTTGSSSTGEISLGAPTCSARTRHGRWAL
Ga0308179_10115363	3300031424	Soil	MVTHYPPARLRYNSDQPTAITDVLINRSGSSSRSGEIPLGTPTCSARTRQGRWAL
Ga0308179_10611661	3300031424	Soil	MVTHYQPGRLRRNSDQPTAITNVLIATGSSHSTGDIPLGTPTCSARTRQGRWAL
Ga0308179_10632861	3300031424	Soil	MVIHYPPARLRRNSDQLIAITDVLITGSGSSSRSGEIPLGTPTCSARTRQGRWALYPNGDQVVVV
Ga0307408_1020066472	3300031548	Rhizosphere	MVIHYQPGRLRRNSDQPTAITDVLVATSGSSHRTRDIPLGTPTCSVRTRHGRWALYPHGD
Ga0307405_108186011	3300031731	Rhizosphere	MVIHYPPTRLRSNSDQPTAITNVLVTTSGCTRTGDIPLGTPTCSARTRRGRWALYP
Ga0307413_112266952	3300031824	Rhizosphere	MVIHYPPARLRHNSDQPTAITNVLVATSGSASRTGEVPLGTPTCSARTRRGRWARCTPTAIRS
Ga0307413_120073872	3300031824	Rhizosphere	MVMHFPPDRLRRNSDRPTAITDVPIAGSPSGYRTSDILLGTPTCSARTRHGLW
Ga0307407_112996432	3300031903	Rhizosphere	MVTRFPPDRLRRNSDRPTAITDVLVASSPSGYRTTDILLGTPTCSARTRHGLWALYPNGADVVVVWPGGAITGS
Ga0307409_1026417241	3300031995	Rhizosphere	MVIHYPPARLRRNSDQPTAITDVLVATSGSSSTGEIPLGTPTCSVRSRQGRWALYPNGDQVVVVWPGGA
Ga0307416_1021943813	3300032002	Rhizosphere	MVIHYPPARLRHNSDQPTAITNVLVATSGSSSRTGEIPLGSPTCSARTRRGRWGLYPSGE
Ga0307416_1037703922	3300032002	Rhizosphere	MVIHYPPARLRRNSDQPTAITDVLVATSGSSSRTGDIPLGTPTCSARSRQ
Ga0307414_119970712	3300032004	Rhizosphere	MVIHYPPERLRRNSDRPTAITDVLVTTSGSSHQSGEIPLGTPTCSASGRRGRWALYPSGEEVVVAWPGGAL
Ga0307411_106092672	3300032005	Rhizosphere	MVIHYPPARLRRNSDRPTAITNVLVATSGSSHQTGDIALGIPTCSARTRQGRWALYPNGDQVVVVWPGGALV
Ga0307411_121319081	3300032005	Rhizosphere	MVIHHPPARLRQNSDQPTAITDVLVATSGSSSRTGDIPLGTPTCSAHSRHGRWA
Ga0307411_122982671	3300032005	Rhizosphere	MVIHYPPARLRSNSDQPTAITNVLVTTSGCTRTGDIPLGTPTCSARTRRGRWALYP
Ga0307415_1008910391	3300032126	Rhizosphere	MVIHYPPARLRRNSDQPTAITDVLVATSGSSSRTGDIPLGTPTCSARTRQGIWALYA
Ga0307415_1014197571	3300032126	Rhizosphere	MVIHYPPERLRSNSDQPTAITDVLVATSGSSSHTGEIPLGTPTCSARSR
Ga0307415_1023119311	3300032126	Rhizosphere	MVIHYPPARLRSNSDQPTAITNVLVATSGLSSRTGEIPLGTPTCSARTRRGRWALYPSG
Ga0307415_1023857011	3300032126	Rhizosphere	MVIHHPPARLRHNSDQPTVITDVLITGSGSSSRTGEIPLGTPTCSARSRHGRWALYPNGDQVVVVWPS
Ga0307415_1024267402	3300032126	Rhizosphere	MVMHFPPDRLRRNSDRPTAITDVLVAGSPSGYHTTDIQLGTPTCSARTRH
Ga0247830_108765121	3300033551	Soil	MVLHYQPERLRYTSDQPTAITDVLINRSGSSSRSGEIPLGSPTCSARTRQGRWALYPNGDQVVVVWPGGA
Ga0334913_145929_338_505	3300034172	Sub-Biocrust Soil	MVIHYPPARLRYNSDQPTAITNVLITTSGSSHTGEIPLGTPTCSARTRHGRWALYP
Ga0370544_14401_413_610	3300034447	Soil	MVIHYPSARLRRNSDQPTAITDVLITGSGSSSRSGEIPLGSPTWSARTRQGRWARTPTATRSWSCG
Ga0370540_00868_2_184	3300034448	Soil	MVIHYPPARLRHNSDQPTAITNVLVATSDSSSRTGEIPLGTPTCSARSRRGRWALYPNGD
Ga0370540_01703_1_180	3300034448	Soil	MVTHYPPERLRHNSDRPTAITNVLISTSGSSRQSGEIPLGAPTCSASTRRGRWALYPNGE
Ga0370540_07667_2_184	3300034448	Soil	MVIHYPPARLRRNSDQPTAITDVLVATSGSSSRIGEIPLGTPTCSARSRRGRWALYPNGD
Ga0370548_002292_1835_2008	3300034644	Soil	MVIHHRSGRPRRNGDQPTAITDVLVATSRSSHRTGDIPLGIPTCSARSRHGLWALYPN
Ga0370548_015760_928_1098	3300034644	Soil	MVIHYPSGRLRRNSDRPTAITDVLLATSGSSYRAGDIPLGTPTCSAHSSRGRWGLYP
Ga0370548_029216_682_891	3300034644	Soil	MIHHPPARLRQNSDQPTAITNVLVATAGSSSRPGDIPLGTPTCSARSRHGRWALYPNGDQVVVVWPGGAL
Ga0370548_030508_679_876	3300034644	Soil	MVIHYQPERRRHNSDQPTAITNVLVATSGSSHHTGDIPLGTPTCSARSRQGRWALYPNGDEVVVVW
Ga0370548_139209_1_165	3300034644	Soil	MVIHYPPARLRRNSDQPTAITDVLINRSGSSCRSGDIPLGTPTCSARSRQGRWAL
Ga0370541_006661_928_1080	3300034680	Soil	MVIHYPPARLRHNSDQPTAITNVLVTTSGSSSRTGEIPLGTPTCSARSRHG
Ga0370541_042938_363_575	3300034680	Soil	MVTHYPPARLRHNSSGQPTAITNVLLTTSGSSSTGEIPLGPPTCSARSRRGRWALHASGDQVVVVWPGGAL
Ga0370546_014453_3_203	3300034681	Soil	MITRYPPARLRRTSDQPTAITNVLAATAGSSYRTGEIPLGTPTCSARSRHGLWALYPHGAEVVVVWP
Ga0370546_023600_690_833	3300034681	Soil	MVIHYPPERLRSNSDRPSAITDVLVTTTGSSSTGEISLGAPTCSARTR
Ga0370546_080936_336_542	3300034681	Soil	MVIHYPSARLRRNSDQPTAITDVLITGSGSSSRTGEIPLGTPTCSARSRQGRWALYPNGDQVVVVWPGG

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.13
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.13
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F034981

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign