Metagenome / Metatranscriptome Family F035088

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F035088
Family Type	Metagenome / Metatranscriptome
Number of Sequences	173
Average Sequence Length	54 residues
Representative Sequence	LKRQAAFRWLGDEAEAQRLQQEQTYHYVRWTFLVAVAAVIAGLIAVGLALLG
Number of Associated Samples	107
Number of Associated Scaffolds	173

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	7.23 %
% of genes near scaffold ends (potentially truncated)	83.82 %
% of genes from short scaffolds (< 2000 bps)	79.77 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (57.225 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (31.214 % of family members)
Environment Ontology (ENVO)	Unclassified (49.133 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (58.382 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 62.50% β-sheet: 0.00% Coil/Unstructured: 37.50%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.47
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.47
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 173 Family Scaffolds
PF04392	ABC_sub_bind	4.05
PF03401	TctC	2.89
PF00582	Usp	2.89
PF00903	Glyoxalase	2.31
PF01124	MAPEG	1.73
PF11737	DUF3300	1.73
PF03466	LysR_substrate	1.73
PF00486	Trans_reg_C	1.16
PF15943	YdaS_antitoxin	1.16
PF04613	LpxD	1.16
PF00072	Response_reg	0.58
PF13356	Arm-DNA-bind_3	0.58
PF12399	BCA_ABC_TP_C	0.58
PF00732	GMC_oxred_N	0.58
PF00440	TetR_N	0.58
PF07506	RepB	0.58
PF04226	Transgly_assoc	0.58
PF02371	Transposase_20	0.58
PF06078	DUF937	0.58
PF00271	Helicase_C	0.58
PF01315	Ald_Xan_dh_C	0.58
PF01740	STAS	0.58
PF09361	Phasin_2	0.58
PF01135	PCMT	0.58
PF04964	Flp_Fap	0.58
PF13460	NAD_binding_10	0.58
PF00239	Resolvase	0.58
PF03951	Gln-synt_N	0.58
PF04828	GFA	0.58
PF13751	DDE_Tnp_1_6	0.58
PF03411	Peptidase_M74	0.58
PF08734	GYD	0.58
PF13202	EF-hand_5	0.58
PF07732	Cu-oxidase_3	0.58
PF10028	DUF2270	0.58

COG ID	Name	Functional Category	% Frequency in 173 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	4.05
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	2.89
COG1044	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase	Cell wall/membrane/envelope biogenesis [M]	1.16
COG0174	Glutamine synthetase	Amino acid transport and metabolism [E]	0.58
COG1475	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	Cell cycle control, cell division, chromosome partitioning [D]	0.58
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.58
COG2132	Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA)	Cell cycle control, cell division, chromosome partitioning [D]	0.58
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	0.58
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	0.58
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	0.58
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.58
COG2518	Protein-L-isoaspartate O-methyltransferase	Posttranslational modification, protein turnover, chaperones [O]	0.58
COG2519	tRNA A58 N-methylase Trm61	Translation, ribosomal structure and biogenesis [J]	0.58
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.58
COG3753	Uncharacterized conserved protein YidB, DUF937 family	Function unknown [S]	0.58
COG3770	Murein endopeptidase MepA (D-alanyl-D-alanine-endopeptidase)	Cell wall/membrane/envelope biogenesis [M]	0.58
COG3791	Uncharacterized conserved protein	Function unknown [S]	0.58
COG3847	Flp pilus assembly protein, pilin Flp	Extracellular structures [W]	0.58
COG4122	tRNA 5-hydroxyU34 O-methylase TrmR/YrrM	Translation, ribosomal structure and biogenesis [J]	0.58
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	0.58

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.23 %
All Organisms	root	All Organisms	42.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.23 %
cellular organisms	root	All Organisms → cellular organisms	42.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.23 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	42.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.23 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	28.32 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	1.16 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.23 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	21.97 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.16 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.23 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	10.40 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	1.73 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.16 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.58 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.23 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	5.20 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.73 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.16 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.58 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.58 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	0.58 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.58 %
Thalassospiraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Thalassospiraceae	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.23 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3.47 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.73 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.16 %
Rhodopseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas	0.58 %
Methylovirgula	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylovirgula	0.58 %
Pseudolabrys	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys	0.58 %
Thalassospira	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Thalassospiraceae → Thalassospira	0.58 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.58 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.23 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.73 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.16 %
unclassified Pseudolabrys	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys	0.58 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.58 %
Bradyrhizobium macuxiense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium macuxiense	0.58 %
Methylovirgula ligni	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylovirgula → Methylovirgula ligni	0.58 %
Rhodopseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas	0.58 %
Thalassospira	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Thalassospiraceae → Thalassospira	0.58 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.23 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.73 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.16 %
Rhodoplanes sp. JGI PP 4-B12	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	0.58 %
Pseudolabrys sp. Root1462	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	0.58 %
Bradyrhizobium macuxiense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium macuxiense	0.58 %
Methylovirgula ligni	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylovirgula → Methylovirgula ligni	0.58 %
Rhodopseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas	0.58 %
Thalassospira	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Thalassospiraceae → Thalassospira	0.58 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.58 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004092\|Ga0062389_104629409	Not Available	518	Open in IMG/M
3300004633\|Ga0066395_10069198	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1620	Open in IMG/M
3300005332\|Ga0066388_100819643	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1520	Open in IMG/M
3300005332\|Ga0066388_103234517	Not Available	832	Open in IMG/M
3300005332\|Ga0066388_107000585	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	567	Open in IMG/M
3300005363\|Ga0008090_10102336	Not Available	724	Open in IMG/M
3300005436\|Ga0070713_102037610	Not Available	557	Open in IMG/M
3300005713\|Ga0066905_101525980	Not Available	609	Open in IMG/M
3300005764\|Ga0066903_100217158	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2892	Open in IMG/M
3300005764\|Ga0066903_101206488	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1405	Open in IMG/M
3300005764\|Ga0066903_102088974	Not Available	1090	Open in IMG/M
3300005764\|Ga0066903_104491740	Not Available	744	Open in IMG/M
3300005764\|Ga0066903_108638532	Not Available	518	Open in IMG/M
3300006028\|Ga0070717_10957396	Not Available	780	Open in IMG/M
3300006052\|Ga0075029_100408619	Not Available	883	Open in IMG/M
3300006086\|Ga0075019_10140654	Not Available	1406	Open in IMG/M
3300006102\|Ga0075015_100345785	Not Available	828	Open in IMG/M
3300006102\|Ga0075015_100804017	Not Available	565	Open in IMG/M
3300006163\|Ga0070715_10787218	Not Available	576	Open in IMG/M
3300006174\|Ga0075014_100636794	Not Available	614	Open in IMG/M
3300006175\|Ga0070712_100121973	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1962	Open in IMG/M
3300006893\|Ga0073928_10896188	All Organisms → cellular organisms → Bacteria	608	Open in IMG/M
3300006893\|Ga0073928_11219403	Not Available	506	Open in IMG/M
3300009038\|Ga0099829_10451080	Not Available	1066	Open in IMG/M
3300009672\|Ga0116215_1398063	Not Available	596	Open in IMG/M
3300009698\|Ga0116216_10062675	Not Available	2287	Open in IMG/M
3300010043\|Ga0126380_12043960	Not Available	525	Open in IMG/M
3300010048\|Ga0126373_10348791	Not Available	1491	Open in IMG/M
3300010358\|Ga0126370_10893373	All Organisms → cellular organisms → Bacteria → Proteobacteria	801	Open in IMG/M
3300010359\|Ga0126376_12632780	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	552	Open in IMG/M
3300010360\|Ga0126372_10409894	Not Available	1240	Open in IMG/M
3300010360\|Ga0126372_11091357	All Organisms → cellular organisms → Bacteria	816	Open in IMG/M
3300010360\|Ga0126372_12974475	Not Available	525	Open in IMG/M
3300010361\|Ga0126378_11074820	All Organisms → cellular organisms → Bacteria → Proteobacteria	906	Open in IMG/M
3300010376\|Ga0126381_100161729	All Organisms → cellular organisms → Bacteria	2953	Open in IMG/M
3300010376\|Ga0126381_100169636	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylovirgula → Methylovirgula ligni	2887	Open in IMG/M
3300010376\|Ga0126381_102723765	Not Available	706	Open in IMG/M
3300010376\|Ga0126381_103116921	Not Available	657	Open in IMG/M
3300010376\|Ga0126381_104793509	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	520	Open in IMG/M
3300012200\|Ga0137382_10150066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	1579	Open in IMG/M
3300012357\|Ga0137384_10144262	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	1993	Open in IMG/M
3300012971\|Ga0126369_10045999	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3698	Open in IMG/M
3300012971\|Ga0126369_13121499	All Organisms → cellular organisms → Bacteria → Proteobacteria	542	Open in IMG/M
3300014164\|Ga0181532_10208211	Not Available	1143	Open in IMG/M
3300014165\|Ga0181523_10801143	Not Available	513	Open in IMG/M
3300014495\|Ga0182015_10186776	Not Available	1391	Open in IMG/M
3300016270\|Ga0182036_10082380	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2134	Open in IMG/M
3300016270\|Ga0182036_10521588	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	944	Open in IMG/M
3300016270\|Ga0182036_10575926	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	900	Open in IMG/M
3300016270\|Ga0182036_11542240	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300016294\|Ga0182041_11654059	Not Available	592	Open in IMG/M
3300016319\|Ga0182033_10185799	All Organisms → cellular organisms → Bacteria	1640	Open in IMG/M
3300016319\|Ga0182033_10403085	Not Available	1156	Open in IMG/M
3300016319\|Ga0182033_10732593	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	867	Open in IMG/M
3300016319\|Ga0182033_10954290	Not Available	761	Open in IMG/M
3300016319\|Ga0182033_11124826	Not Available	702	Open in IMG/M
3300016341\|Ga0182035_10100000	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2122	Open in IMG/M
3300016341\|Ga0182035_10888871	Not Available	785	Open in IMG/M
3300016341\|Ga0182035_10893392	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	783	Open in IMG/M
3300016357\|Ga0182032_10295013	Not Available	1278	Open in IMG/M
3300016357\|Ga0182032_10535900	Not Available	967	Open in IMG/M
3300016357\|Ga0182032_11223400	Not Available	647	Open in IMG/M
3300016357\|Ga0182032_11419842	Not Available	601	Open in IMG/M
3300016371\|Ga0182034_10023765	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3715	Open in IMG/M
3300016371\|Ga0182034_10909439	Not Available	757	Open in IMG/M
3300016422\|Ga0182039_10239254	Not Available	1472	Open in IMG/M
3300016422\|Ga0182039_10652524	Not Available	924	Open in IMG/M
3300016422\|Ga0182039_11918411	Not Available	544	Open in IMG/M
3300016422\|Ga0182039_12256833	Not Available	502	Open in IMG/M
3300016445\|Ga0182038_10258622	All Organisms → cellular organisms → Bacteria	1404	Open in IMG/M
3300016445\|Ga0182038_10672168	All Organisms → cellular organisms → Bacteria	900	Open in IMG/M
3300017932\|Ga0187814_10266580	Not Available	651	Open in IMG/M
3300017933\|Ga0187801_10050334	All Organisms → cellular organisms → Bacteria → Proteobacteria	1513	Open in IMG/M
3300017936\|Ga0187821_10248282	Not Available	695	Open in IMG/M
3300017942\|Ga0187808_10254532	Not Available	786	Open in IMG/M
3300017955\|Ga0187817_10278915	Not Available	1065	Open in IMG/M
3300017974\|Ga0187777_10980942	Not Available	610	Open in IMG/M
3300017993\|Ga0187823_10203879	Not Available	650	Open in IMG/M
3300017995\|Ga0187816_10280819	Not Available	729	Open in IMG/M
3300018001\|Ga0187815_10242114	Not Available	763	Open in IMG/M
3300018060\|Ga0187765_10431682	Not Available	820	Open in IMG/M
3300018085\|Ga0187772_10011367	Not Available	4852	Open in IMG/M
3300018090\|Ga0187770_10072098	All Organisms → cellular organisms → Bacteria	2533	Open in IMG/M
3300020580\|Ga0210403_11404972	Not Available	529	Open in IMG/M
3300021168\|Ga0210406_10040862	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4115	Open in IMG/M
3300021560\|Ga0126371_11939996	All Organisms → cellular organisms → Bacteria → Proteobacteria	707	Open in IMG/M
3300022881\|Ga0224545_1047847	Not Available	604	Open in IMG/M
3300025320\|Ga0209171_10468397	All Organisms → cellular organisms → Bacteria → Proteobacteria	631	Open in IMG/M
3300026997\|Ga0207784_1011642	All Organisms → cellular organisms → Bacteria → Proteobacteria	948	Open in IMG/M
3300027898\|Ga0209067_10274196	Not Available	922	Open in IMG/M
3300027910\|Ga0209583_10217884	Not Available	825	Open in IMG/M
3300027911\|Ga0209698_11373203	Not Available	515	Open in IMG/M
3300027915\|Ga0209069_10922550	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	530	Open in IMG/M
3300029636\|Ga0222749_10316951	Not Available	810	Open in IMG/M
3300030494\|Ga0310037_10039906	Not Available	2247	Open in IMG/M
3300031057\|Ga0170834_105854940	Not Available	872	Open in IMG/M
3300031057\|Ga0170834_105909488	All Organisms → cellular organisms → Bacteria	1644	Open in IMG/M
3300031122\|Ga0170822_15589306	Not Available	598	Open in IMG/M
3300031128\|Ga0170823_14241056	Not Available	923	Open in IMG/M
3300031446\|Ga0170820_12944165	Not Available	502	Open in IMG/M
3300031545\|Ga0318541_10156793	Not Available	1251	Open in IMG/M
3300031546\|Ga0318538_10780217	Not Available	519	Open in IMG/M
3300031573\|Ga0310915_10227833	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1308	Open in IMG/M
3300031680\|Ga0318574_10584226	Not Available	655	Open in IMG/M
3300031681\|Ga0318572_10003471	All Organisms → cellular organisms → Bacteria	6709	Open in IMG/M
3300031681\|Ga0318572_10750396	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300031682\|Ga0318560_10440865	Not Available	705	Open in IMG/M
3300031708\|Ga0310686_105486067	Not Available	1288	Open in IMG/M
3300031708\|Ga0310686_115081683	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1128	Open in IMG/M
3300031719\|Ga0306917_10512238	Not Available	942	Open in IMG/M
3300031753\|Ga0307477_10104774	All Organisms → cellular organisms → Bacteria	1967	Open in IMG/M
3300031754\|Ga0307475_10039570	All Organisms → cellular organisms → Bacteria → Proteobacteria	3483	Open in IMG/M
3300031770\|Ga0318521_10007866	All Organisms → cellular organisms → Bacteria	4389	Open in IMG/M
3300031771\|Ga0318546_10458574	All Organisms → cellular organisms → Bacteria	893	Open in IMG/M
3300031781\|Ga0318547_10025523	All Organisms → cellular organisms → Bacteria	2974	Open in IMG/M
3300031795\|Ga0318557_10004169	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4873	Open in IMG/M
3300031833\|Ga0310917_10540430	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	792	Open in IMG/M
3300031845\|Ga0318511_10111587	Not Available	1171	Open in IMG/M
3300031879\|Ga0306919_10025767	All Organisms → cellular organisms → Bacteria	3635	Open in IMG/M
3300031879\|Ga0306919_10676187	All Organisms → cellular organisms → Bacteria	795	Open in IMG/M
3300031879\|Ga0306919_11316969	Not Available	547	Open in IMG/M
3300031890\|Ga0306925_10499859	Not Available	1295	Open in IMG/M
3300031890\|Ga0306925_10698914	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1061	Open in IMG/M
3300031890\|Ga0306925_10865313	Not Available	932	Open in IMG/M
3300031890\|Ga0306925_11026630	All Organisms → cellular organisms → Bacteria → Proteobacteria	839	Open in IMG/M
3300031890\|Ga0306925_11644759	Not Available	622	Open in IMG/M
3300031910\|Ga0306923_11307314	Not Available	769	Open in IMG/M
3300031912\|Ga0306921_10063233	All Organisms → cellular organisms → Bacteria → Proteobacteria	4227	Open in IMG/M
3300031912\|Ga0306921_10410282	Not Available	1580	Open in IMG/M
3300031941\|Ga0310912_10046666	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3029	Open in IMG/M
3300031942\|Ga0310916_10071841	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2709	Open in IMG/M
3300031942\|Ga0310916_10143299	All Organisms → cellular organisms → Bacteria	1965	Open in IMG/M
3300031942\|Ga0310916_11727223	Not Available	505	Open in IMG/M
3300031945\|Ga0310913_10217173	All Organisms → cellular organisms → Bacteria	1339	Open in IMG/M
3300031945\|Ga0310913_10238665	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1275	Open in IMG/M
3300031946\|Ga0310910_10700744	Not Available	800	Open in IMG/M
3300031947\|Ga0310909_10174069	Not Available	1779	Open in IMG/M
3300031947\|Ga0310909_10848461	Not Available	752	Open in IMG/M
3300031954\|Ga0306926_10299034	Not Available	1992	Open in IMG/M
3300031954\|Ga0306926_10623038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1315	Open in IMG/M
3300031954\|Ga0306926_10910452	All Organisms → cellular organisms → Bacteria	1052	Open in IMG/M
3300031954\|Ga0306926_11060307	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	961	Open in IMG/M
3300031954\|Ga0306926_12968084	Not Available	507	Open in IMG/M
3300031959\|Ga0318530_10026920	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	2027	Open in IMG/M
3300032001\|Ga0306922_10075084	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3541	Open in IMG/M
3300032001\|Ga0306922_10077279	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3491	Open in IMG/M
3300032001\|Ga0306922_10133317	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2648	Open in IMG/M
3300032035\|Ga0310911_10271431	Not Available	973	Open in IMG/M
3300032035\|Ga0310911_10394550	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	800	Open in IMG/M
3300032035\|Ga0310911_10447052	Not Available	748	Open in IMG/M
3300032035\|Ga0310911_10469503	Not Available	729	Open in IMG/M
3300032035\|Ga0310911_10653515	Not Available	610	Open in IMG/M
3300032035\|Ga0310911_10929955	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300032043\|Ga0318556_10043679	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas	2142	Open in IMG/M
3300032076\|Ga0306924_10083863	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3577	Open in IMG/M
3300032076\|Ga0306924_10100557	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3270	Open in IMG/M
3300032076\|Ga0306924_10543418	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium macuxiense	1319	Open in IMG/M
3300032076\|Ga0306924_10808356	All Organisms → cellular organisms → Bacteria	1044	Open in IMG/M
3300032094\|Ga0318540_10668623	Not Available	500	Open in IMG/M
3300032180\|Ga0307471_103009562	Not Available	598	Open in IMG/M
3300032261\|Ga0306920_100531788	All Organisms → cellular organisms → Bacteria	1743	Open in IMG/M
3300032261\|Ga0306920_101458929	Not Available	978	Open in IMG/M
3300032261\|Ga0306920_102036487	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Thalassospiraceae → Thalassospira	803	Open in IMG/M
3300032261\|Ga0306920_102718511	Not Available	676	Open in IMG/M
3300032261\|Ga0306920_103442451	Not Available	586	Open in IMG/M
3300033158\|Ga0335077_11854080	Not Available	565	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.97%
Aquatic	Environmental → Aquatic	15.03%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.39%
Freshwater	Environmental → Aquatic → Freshwater	6.94%
Sediment	Environmental → Aquatic → Sediment	6.36%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.73%
Peat	Environmental → Terrestrial → Peat	0.58%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	72.25%
Loam	Environmental → Terrestrial → Soil → Loam	8.67%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.94%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.36%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.47%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.73%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.58%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	56.07%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.61%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.36%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.36%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.62%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.89%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.31%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.31%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.73%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.58%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.58%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.58%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	31.21%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	19.65%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.25%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	6.36%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.36%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.62%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.47%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.89%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.31%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.31%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.31%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.73%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.73%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.16%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.16%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.16%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.58%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.58%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.58%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.58%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017993	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022881	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P1 20-24	Environmental	Open in IMG/M
3300025320	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG (SPAdes)	Environmental	Open in IMG/M
3300026997	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 66 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062389_1046294092	3300004092	Bog Forest Soil	DALNSGSDFTDELKRQASFRWLGDDAEAQRLRQEHTHHYVKWALIAAIAAVIVGVIGVGLTFLH*
Ga0066395_100691981	3300004633	Tropical Forest Soil	AFRWLGDEAEAQRLQQQQTYHYIRWTFLIAVAVVIASLIVVGLSLLR*
Ga0062388_1014604432	3300004635	Bog Forest Soil	MADELKTQAAFHWVGDEAQAQRLREEKTTHHIRWTFVAAIAAVIVALIALGLTLLH*
Ga0066388_1008196431	3300005332	Tropical Forest Soil	RDALNGDGFTNELKRQAAFRWLGDEAEVQRLQQDQTYHYVRWTFLVVLGVVIAGLIAVGLALLR*
Ga0066388_1032345173	3300005332	Tropical Forest Soil	LGDEAEAWRLQQEQTYHYIKWTFLIAVAVVIAGLIALGLSLLR
Ga0066388_1070005851	3300005332	Tropical Forest Soil	KRQAAFRWLGDEAEAQRLQQQQTYHYIRWTFLIAVAVVIAGLIALGLSLLR*
Ga0008090_101023361	3300005363	Tropical Rainforest Soil	MASLMNWGDEAEAQRLQQEQTYHYVRWTFLVAVAAVIAGLIAVGLALLG*
Ga0070713_1020376101	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	LNSGDGFTDGLKRQSAFRWLGDEAEAQRLQQEQTHHYVRWTFLVGVAAVIAGLIALGLSLLR*
Ga0066905_1015259801	3300005713	Tropical Forest Soil	TDELKRQAALRWLGDEVEARRLREEKTYHYVRGTLLIVVAAVIAGLIAVGLAQLR*
Ga0066903_1002171585	3300005764	Tropical Forest Soil	WLGDEVEARRLREEKTYHYVKGILLIVVAAVIAALIVVGLAQLR*
Ga0066903_1012064881	3300005764	Tropical Forest Soil	RQAALRWLGDEVEARRLREEKTYHYVRGTLLIVVAAVIAGLIAAGLAQLR*
Ga0066903_1020889741	3300005764	Tropical Forest Soil	RQAAFRWLGDEAEAQRLQQEQTYHYVRWTFLVAVAAVIAGLIAVGLALLS*
Ga0066903_1044917402	3300005764	Tropical Forest Soil	LRWLGDEVEARRLREEKTYHYVRGTLLIVVAAVIAGLIAVGLAQLR*
Ga0066903_1086385322	3300005764	Tropical Forest Soil	LADEKSQAAFRWLGDEAEARRLQQEQTYHYIKWTFLIAVAVVIAGLIALGLSLLR*
Ga0070717_109573962	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	AFRWLGDEAEVQRLQQDQTYHYVRWTFFVVLGVVIAGLIAVGLALLR*
Ga0075029_1004086193	3300006052	Watersheds	MARRVPAPRRGTLRDALNSGSGFTDELKRQAAFRWFGDEAEAQRLREEQSYHHVRWTFIAVIGPVIVGLIGVGLTVLH*
Ga0075017_1002260443	3300006059	Watersheds	MADEPKRQAAFRWVGDEAQAQRLREEKATHHIRWTFVAAVAAVIVALIALGLTLLH*
Ga0075019_101406543	3300006086	Watersheds	MADEPKRQAAFRWVGDEAQAQRLREEKTTHHIRWIFVAAVAAVIVALIALGLTLLH*
Ga0075015_1003457852	3300006102	Watersheds	MADEPKRQAAFRWVGDEAQAQRLREEKTTHHIRWTFVAAVAAVIVALIALGLTLLH*
Ga0075015_1008040171	3300006102	Watersheds	ELKRQAAFRWLGDEVEAQRLREEQTNHYVRWSFFAVIAAVIVGLIGVGLTFLH*
Ga0070715_107872182	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	TDGLKRQSAFRWLGDEAEAQRLQQEQTHHYVRWTFLVGVAAVIAGLIALGLSLLR*
Ga0075014_1006367941	3300006174	Watersheds	AFRWLGDEAEAQRLQQEQTYHYVRWTFLVAVAAVIAGLIALGLSLLR*
Ga0070712_1001219732	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	GDEAEAQRLQQEQTHHYIRWTFLVAAAAVIAGLIVVGLALLS*
Ga0075021_111057261	3300006354	Watersheds	MADEPKRQAEFQWSGDEAQAQRLREEKTHHYVRLTFFAAIAAVIVGLIVVGLTFLR*
Ga0073928_108961881	3300006893	Iron-Sulfur Acid Spring	QVRDALNSITDEPKRQAAFRWLGDEAEARRLREEQTHHYVQWTFFAAVAAVIVGLIGVGLTLLH*
Ga0073928_112194032	3300006893	Iron-Sulfur Acid Spring	QVRDALNSITDEPKRQAAFRWLGDEAEARRLREEQTHHYVRWTFFAAVAAVIVGLIGVGLALLH*
Ga0099829_104510801	3300009038	Vadose Zone Soil	DELKRQAAFRWLGDEAEAQRLQQEHTYHYVRWSFSVAVAAVIAGLIAVGLALLR*
Ga0116218_10591792	3300009522	Peatlands Soil	MADEPKRQAAFRWVGDEAQAQRLREEKTTHHIRWTFVAAIAAVIVALIALGLTLLH*
Ga0116215_13980631	3300009672	Peatlands Soil	KGQAAFRWLGDEAEERRLREERTYHYVRWTFFVAIAAVIVGLIGVGLTLLH*
Ga0116216_100626756	3300009698	Peatlands Soil	GIADEPKRQAAFRRLGDEAQARRLREEKTYHYVRWTSFAAIAAVIVGLIGLGLTLLH*
Ga0116216_104790941	3300009698	Peatlands Soil	MADEPKRQAAFRWVGDEAQAQRLREEKATHHIRWTFVSSVPAVIVALIALVLTFLH*
Ga0126380_120439602	3300010043	Tropical Forest Soil	LGDEAEARRLQQEQTYHYIKWTFLIAVAVVIAGLIALGLSLLR*
Ga0126373_103487914	3300010048	Tropical Forest Soil	LQQQQTYHYIRWTFLIAVAVVIASLIALGLSLLR*
Ga0126370_108933732	3300010358	Tropical Forest Soil	GDGFTDELKRQAALRWLGDEVEARRLRDEKTYHYVRGTLLIVVAAVIAGLIAVGLAQLR*
Ga0126376_126327802	3300010359	Tropical Forest Soil	QAAFRWLGDEAQAQRLQQEQTYHYVRWSFLVAVAAVIAGLIAVGLALFN*
Ga0126372_104098942	3300010360	Tropical Forest Soil	LKRQAALRWLGDEVEARRLREVKTYHYVRGTLLIVVAAVIAGLIAVGLAQLR*
Ga0126372_110913572	3300010360	Tropical Forest Soil	LSGDGFTDELKRQAALRWLGDEVEARRLREEKTYHYVRGTLLIVVAAVIAGLIAVGLAQLR*
Ga0126372_129744752	3300010360	Tropical Forest Soil	RWLGDEAEAQRLQQQQTYHYIRWTFLIAVAVVIASLIALGLSLLR*
Ga0126378_110748202	3300010361	Tropical Forest Soil	QAALRWLGDEVEARRLREEKTYHYVRGTLLIVVAAVIAGLIAVGLAQLR*
Ga0126381_1001617296	3300010376	Tropical Forest Soil	AAFRWLGDEAEAQRLQQQQTYHYIRWTFLIAVAVVIASLIAVGLSLLR*
Ga0126381_1001696363	3300010376	Tropical Forest Soil	GVKELREALSGDGFTDELKRQAALRWLGDEVEARRLREEKTYHYVRGTLLIVVAAVIAGLIAVGLAQLR*
Ga0126381_1027237651	3300010376	Tropical Forest Soil	APSDDGLTDESKRQAAFRWLGDEAEAQRLQQEQTYHYVRWAFLVAVAAVIAGLIAVGLALLR*
Ga0126381_1031169211	3300010376	Tropical Forest Soil	LSGDGFTDELKRQAALRWLGDEAEAQRLRQEQTHHYVRWTFLVAVAAVIAGLIAVGLALLG*
Ga0126381_1047935091	3300010376	Tropical Forest Soil	AALRWLGDEVEARRLREEKTYHYVRGTLLIVVAAVIAGLIAVGLAQLR*
Ga0137382_101500664	3300012200	Vadose Zone Soil	LKRQAAFRWLGDEAEAQRLQQEQTYHYVRWTFLVAVAAVIAGLIALGLSLLR*
Ga0137384_101442625	3300012357	Vadose Zone Soil	SGVGIADEPKRQAAFRWLGDEAQARRLREEKTYHYVRWTYFAAIAAVIAGLIAVGLALLR
Ga0126369_100459991	3300012971	Tropical Forest Soil	AAFRWLGDEAEAQRLQQQQTYHYIRWTFLIAVAVVIASLIVVGLSLLR*
Ga0126369_131214991	3300012971	Tropical Forest Soil	LRWLGDEVEARRLREEKTYHYVRGTLLIVVAAVIAGVIAVGLAQLR*
Ga0181532_102082112	3300014164	Bog	MAEPEPKRQAAFRWLGDEAEERRLREEQTHHYARWIFFAAVAAVIVGLIGVSLTFLH*
Ga0181523_108011432	3300014165	Bog	MAEPEPKRQAAFRWLGDEAEERRLREEQTHHYARWIFFAAAAAVIVGLIGVSLTFLH*
Ga0182015_101867763	3300014495	Palsa	VSVLVRDGIIPEPKRQAGFRWLGDQAQARRAREERTFNYVRWTFFAAVAAVLVGIIGIASTLMH*
Ga0182036_100823804	3300016270	Soil	RDALSGDGFTDELKRQAALRWLGDEVEARRLREEKTSHYVRGTLLIVVAAVIAGLIAVGLAQLR
Ga0182036_105215882	3300016270	Soil	EARRLQQEQTYHYIKWTFLIAVAVVIAGLIALGLSLLR
Ga0182036_105759261	3300016270	Soil	LGGGGLADEKTQAAFRWLGDEAEARRLQQEQTYHYIKWTFLIAVAVVIAGVIALGLSLLR
Ga0182036_115422402	3300016270	Soil	QIRDALGGGGLADEKTQAAFRWLGDEAEARRLKQEQTYHYIKWTFLIAVAVVIAGLIALGLSLLR
Ga0182041_116540592	3300016294	Soil	GDGLTDELKRQAAFRWLGDEAEAQRLQQEQTYHYVRWSFLVAVAAVIAGLIAVGLALLN
Ga0182033_101857991	3300016319	Soil	QAAFRWLGDEAEARRLQQEQTYHYIKWTFLIAVAVVIAGVIALGLSLLR
Ga0182033_104030852	3300016319	Soil	LKRQAAFRWLGDEAEAQQLQQEQTYHYVRWSFLVAVAAVIAGLIAVGLALLG
Ga0182033_107325932	3300016319	Soil	QAAPRWLGDEVEARRLREEKTYHYVRGTLLIVVAAVIASLIAAGLAQLR
Ga0182033_109542901	3300016319	Soil	TSGDGLTDELKRQAAFRWLGDEAEAQRLRQEQTYHYVRWRFLVAVAAVIAGLIAVGLTLL
Ga0182033_111248262	3300016319	Soil	KELRDAPSDDRLTDELKRQAAFRWLGDEAEAQRLQQEQTYHYVRWTFLVAVAAVIAGLIAVGLALLR
Ga0182035_101000001	3300016341	Soil	RQAALRWLGDEVEARRLREEKTSHYVRGTLLIVVAAVIAGLIAVGLAQLR
Ga0182035_108888711	3300016341	Soil	RQAAFRWLGDEAEAKRLKQEQTYHYVRWTFLVAVAAVIAGLIAVGLALLDETHQQP
Ga0182035_108933921	3300016341	Soil	FRWLGDEAEAQRLQQEQTYHYVRWSFLVAVAAVIAGLIAVGLALLN
Ga0182032_102950134	3300016357	Soil	KRQAALRWLGDEVEARRLREEKTYHYVRGTLLIVVAAVIAGLIAAGLAQLR
Ga0182032_105359001	3300016357	Soil	QIRDALGGGGLADEKSQAAFRWLGDEAEARRLKQEQTYHYIKWTFSIAVAVVIAGLIALGLSLLR
Ga0182032_112234002	3300016357	Soil	FAALHESAAFRWLGDEAEVQRLQQDQTYHYVRWTFLVVLGVVIAGLIAAGLALLR
Ga0182032_114198421	3300016357	Soil	THTRDALSVGGFTDEKRQAAFRWLGDEAEAQRLQQEHTYHYVRWTLLVAVAVVIAGLIAVGLAQLR
Ga0182034_100237654	3300016371	Soil	RNGHGFTNELKRQEAFRWLGDEAEAQRLQQEQAYHYVRWIFLVAVAAVIAGLIAVGLALL
Ga0182034_109094391	3300016371	Soil	SGDGLTDELKRQAACRWLGDEAEAQRLRQEQTYHYVRWRFLVAVAAVIAGLIAVGLTLLN
Ga0182039_102392542	3300016422	Soil	GGGLADEKSQAAFRWLGDEAEARRLQQEQTHHYIKWTLLIAVAVVIAGLIALGLSALR
Ga0182039_106525241	3300016422	Soil	QAAFRWLGDEAEAQRLQRDQTYHYVRWIFLIAVAAVIADVIAVGLARLS
Ga0182039_119184111	3300016422	Soil	LGSRRLSRCKRATSGDGLTDELKRQAAFRWLGDEAEAQRLRQEQTYHYVRWRFLVAVAAVIAGLIAVGLTLLN
Ga0182039_122568331	3300016422	Soil	LTDEFKRQAAFRWLGDEAEAKRLKQEQTYHYVRWTFLVAVAAVIAGLIAVGLALLG
Ga0182038_102586221	3300016445	Soil	EARRLQQEQTYHYIKWTFLIAVAVVIAGVIALGLSLLR
Ga0182038_106721681	3300016445	Soil	VTQIRDALGGGGLADEKSQAAFRWLGDEAEARRLKQEQTYHYIKWTFSIAVAVVIAGLIALGLSLLR
Ga0187814_102665802	3300017932	Freshwater Sediment	LKRQAAFRWLGDEAEVQRLQQEHTYHYVRWTFFVVLGVVIAGLIAVGLALLR
Ga0187801_100503343	3300017933	Freshwater Sediment	DGFTDESKRQAAFRWLGDEAEAQRLQQEQTYHYVRWTFLVAVAAVIAGLIALGLSLLR
Ga0187821_102482822	3300017936	Freshwater Sediment	DGFTDELKRQAAFRWLGDEAEAQRLQQEQTYHYVRWTFLVAVAAVIAGLIALGLSLLC
Ga0187808_102545322	3300017942	Freshwater Sediment	GDEAEARRLQQEHTYHYVRWAFLVALAALIAGLIAVGLALLR
Ga0187817_102789151	3300017955	Freshwater Sediment	LKRQAAFRWLGDEAEAQRLQQEQTYHYVRWTFLVAVAAVIAGLIALGLSLLR
Ga0187777_109809421	3300017974	Tropical Peatland	MAFTDELKRQAAFRWLGDEAEAQRLQREQTYHYVRWTFLVAVAAVIAGLIAVGLALLS
Ga0187823_102038791	3300017993	Freshwater Sediment	RDVLNSGDGLTDELKRQAAFRWLGDEAEAQRLQQEQTYHYVRWTFLVAVAAVIAGLIALGLSLLR
Ga0187816_102808191	3300017995	Freshwater Sediment	SGATQLRETPNNGGGSADELKEHAAFRWLGDEAEERRLQLEKTYHYGRWTMLVAVAAVIASLIAVGLAQLG
Ga0187815_102421141	3300018001	Freshwater Sediment	AFRWLGDEAAARRAREERTFRYVRWTSFAAVWAVIVGIAGIAVTIGVALR
Ga0187765_104316822	3300018060	Tropical Peatland	WSGDESERQRLQEQQSYHYVRWTFFVAIAVVIASIIAVGLTLLH
Ga0187772_100113673	3300018085	Tropical Peatland	MADERKRQDTFRWLGDEAETRRLREEKTHHYVRWILIAAIAVVIVIPIGVGLTLLH
Ga0187770_100720986	3300018090	Tropical Peatland	EAEAQRLQQEQTYHYLRWTFLVFLGVMIAGLIAVGLALLR
Ga0210403_114049722	3300020580	Soil	QVRDALNSITDETKRQAAFRWLGDEAEARRLREEQTHHYVRWTFFAAVAAVIVGLIGVGLALLH
Ga0210406_100408621	3300021168	Soil	AFNSITDEPKRQAAFRWLGDEAEARRLREEQTHHYVRWTFFAAVAAVIVGLIGVGLTLLH
Ga0126371_119399961	3300021560	Tropical Forest Soil	LRWLGDEVEARRLREEKTYHYVRGTLLIVVAAVIAGLIAVGLAQLR
Ga0224545_10478471	3300022881	Soil	EPKRQAAFRWLGDEAQARRLRDEKTYHYVRWTFFAAIAAVIVGLVGVGLTLLH
Ga0209171_104683972	3300025320	Iron-Sulfur Acid Spring	TQVRDALNSITDEPKRQAAFRWLGDEAEARRLREEQTHHYVQWTFFAAVAAVIVGLIGVGLTLLH
Ga0207784_10116421	3300026997	Tropical Forest Soil	AAFRWLGDEAEAQRLQQEQTYHYVRWTFLVAVAAVIAGLIVVGLALLG
Ga0209067_102741961	3300027898	Watersheds	MADEPKRQAAFRWVGDEAQAQRLREEKATHHIRWTFVAAVAAVIVALIALGLTLLH
Ga0209583_102178841	3300027910	Watersheds	RWLGDEAEARRLQQEHTYHYVRWAFLVALAALIAGLIAVGLALLR
Ga0209698_113732032	3300027911	Watersheds	DKLKERAAFRWLGDEAEERRLQQEKTYHYGRWTLLVAVAAVIASLIAVGLAQLR
Ga0209069_109225501	3300027915	Watersheds	LNGDGFTNELKKQAAFRWLGDEAEAQRLQHDQTYHYVRWTFLVVIGAVIAGLIAVGLALL
Ga0222749_103169511	3300029636	Soil	LKTQVAFRWLGDEAEAQRLQQEHTYHYVRWTFLVALAAVIAGLIAIGLAL
Ga0310037_100399065	3300030494	Peatlands Soil	PKRQAAFRRLGDEAQARRLREEKTYHYVRWTSFAAIAAVIVGLIGLGLTLLH
Ga0170834_1058549401	3300031057	Forest Soil	QAAFRWLGDEAEAQRLQQEQTHHYVRWTFLVAVAAVIAGLIALGLSLLR
Ga0170834_1059094883	3300031057	Forest Soil	VTNELKTQAAFRWLGDEAEAQRLQQEHTYHYVRWTFLVALAAVIAGLIAVGLALLR
Ga0170822_155893061	3300031122	Forest Soil	DELKRQAAFRWLGDEAEAQWLEQEQTYHYVRWTFLVAVAAVIAGLIAVGLALLR
Ga0170823_142410561	3300031128	Forest Soil	DGFTDGLKRQAAFRWLGDKAEAQRLQQEQTHHYVRWTFLVAVAAVIAGLIALGLSLLR
Ga0170820_129441651	3300031446	Forest Soil	WLGDEAEARRLQQEHTYHYVRWASLVALAALIAGLIAVGLALLR
Ga0318541_101567931	3300031545	Soil	LKRQAAFRWLGDEAEAQRLQQEQTYHYVRWTFLVAVAAVIAGPIAVGLALLG
Ga0318538_107802171	3300031546	Soil	GFTDELKRQAAPRWLGDEVEARRLREEKTYHYVRGTLLIVVAAVIAGLIAVGLAQLR
Ga0310915_102278331	3300031573	Soil	LGDEAEAQRLQQEQTYHYIKWTFLIAVAVVIAGVIALGLSLLR
Ga0318574_105842261	3300031680	Soil	AAFRWLGDEAEVQRLQQDQTYHYVRWTFLVVLGVVIAGLIAAGLALLR
Ga0318572_1000347114	3300031681	Soil	TDELKRQAAFRWLGDEAEAQRLQQEQTYHYVRWSFLVAVAAVIAGLIAVGLALLG
Ga0318572_107503961	3300031681	Soil	GLADETSQAAFRWLGDEAEARRLQQEQTHHYIKWTLLIAVAVVIAGLIALGLSALR
Ga0318560_104408651	3300031682	Soil	DELKRQAAFRWLGDEAEAQRLRQEQTYHYVRWRFLVAVAAVIAGLIAVGLTLLN
Ga0310686_1054860672	3300031708	Soil	LGIADEPKRQAGFRWLGDEAQARRLREDKTRHYVRWTFFAAIAAVIVSLIGVGLTLLH
Ga0310686_1150816833	3300031708	Soil	QVAFRWLGDEVEARRLRQEHTHHYVRWICLAAIGAVIDSLLPAQ
Ga0306917_105122384	3300031719	Soil	GDEAEARRLKQEQTYHYIKWTFLIAVAVVIAGLIALGLSLLR
Ga0307477_101047743	3300031753	Hardwood Forest Soil	DALNGDGFTNELKKQAAFRWLGDEAEAQRLQQDQTYHYVRWTFLVVIGAVIAGLIAVGLALLR
Ga0307475_100395701	3300031754	Hardwood Forest Soil	ELKKQAAFRWLGDEAEAQRLQQDQTYHYVRWTFLVVIGAVIAGLIAVGLALLR
Ga0318521_100078661	3300031770	Soil	GDGLTDELKRQAAFRWLGDEAEAQRLQQEQTYHYVRWSFLVAVAAVIAGLIAVGLALLG
Ga0318546_104585742	3300031771	Soil	LSRCKRATSGDGLTDELRRQAAFRWLGDEAEAQRLQQEQTYQYVRWTFLVAVAAVIAGR
Ga0318547_100255232	3300031781	Soil	LKRQAAFRWLGDEAEAQRLQQEQTYHYVGWSFLVAVAAVIAGLIAVGLALLG
Ga0318557_100041691	3300031795	Soil	RQAAFRWLGDEAEAQRLQQQQTYHYIRWTFLIAVAVVIASLIVVGLSLLR
Ga0310917_105404301	3300031833	Soil	AAFHWLGDEAEARRLQQEKTYHYIRWILLVGVAAVIACLIAVGLAQLS
Ga0318511_101115872	3300031845	Soil	CKRATSGDGLTDELKRQAAFRWLGDEAEAQRLQQEQTYHYVRWSFLVAVAAVIAGLIAVGLALLG
Ga0306919_100257671	3300031879	Soil	SRCKRATSGDGLTDELKRQAAFRWLGDEAEAQRLQQEQTYHYVRWSFLVAVAAVIAGLIAVGLALLG
Ga0306919_106761872	3300031879	Soil	AFRWLGDEAEARRLKQEQTYHYIKWTFSIAVAVVIAGLIALGLSLLR
Ga0306919_113169691	3300031879	Soil	ALSGNGFTDELKRQAALRWLGDEVEARRLREEKTYHYVRGTLLIVVAGVIAGLIAVGLAQLR
Ga0306925_104998593	3300031890	Soil	VKELRDALSGDGFTDELERQAALRWLGDEVEARRLQEEKTYHYVRGTLLIVVAAVIAGLIAVGLAQLR
Ga0306925_106989141	3300031890	Soil	GDGLTDELKRQAAFRWLGDEAEAQRLRQEQTYHYVRWRFLVAVAAVIAGLIAVGLTLLN
Ga0306925_108653132	3300031890	Soil	LRDALAGGVFTDEKRQAAFRWLDDEAEAQRLQQEQTYHYIRWTFLIAVAVVIAGLIALGLSLLR
Ga0306925_110266302	3300031890	Soil	GDEVEARRLREEKTYHYVRGTLLIVVAAVIAGLIAVGLAQLR
Ga0306925_116447591	3300031890	Soil	EHRDALSGDGFTDELKRQAALRWLGDEVEARRLREEKTYHYVRGTLLIVVAGVIAGLIAVGLAQLR
Ga0306923_113073142	3300031910	Soil	AFRWLGDEAEAQRLQQEQTYHYVRWTFLVAVAAVIAGLIAVGLALLR
Ga0306921_100632335	3300031912	Soil	ELKRQEAFRWLGDEAEAQRLQQEQAYHYVRWIFLVAVAAVIAGLIAVGLALLG
Ga0306921_104102823	3300031912	Soil	RDALGGGGLADEKTQAAFRWLGDEAEARRLKQEQTYHYIKWTFLIAVAVVIAGLIALGLSLLR
Ga0310912_100466661	3300031941	Soil	KTQAAFRWLGDEAEARRLQQEQTYHYIKWTFLIAVAVVIAGVIALGLSLLR
Ga0310916_100718413	3300031942	Soil	SSRLSRCKRATSGDGLTDELKRQAAFRWLGDEAEAQRLRQEQTYHYVRWRFLVAVAAVIAGLIAVGLTLLN
Ga0310916_101432991	3300031942	Soil	GVTQIRDALGGGGLADEKTQAAFRWLGDEAEARRLQQEQTYHYIKWTFLIAVAVVIAGVIALGLSLLR
Ga0310916_117272231	3300031942	Soil	DALSVGGFTDEKRQAAFRWLGDEAEAQRLQQQQTYHYIRWTFLIAVAVVIASLIVVGLSLLR
Ga0310913_102171731	3300031945	Soil	LADEKSQAAFRWLGDEAEARRLQQEQTYHYIKWTFSIAVAVVIAGLIALGLSLLR
Ga0310913_102386652	3300031945	Soil	AEARRLQQEQTYHYIKWTFLIAVAVVIAGVIALGLSLLR
Ga0310910_107007441	3300031946	Soil	LGDEAEARRLQQEQTYHYIKWTFLIAVAVVIAGLIALGLSLLR
Ga0310909_101740692	3300031947	Soil	LKRQAAFRWLGDEAEAQRLQQEQTYHYVRWTFLVAVAAVIAGLIAVGLALLG
Ga0310909_108484612	3300031947	Soil	LGDEAEAQRLQRDQKYHYVRWIFLIAVAAVIADVIAVGLARLS
Ga0306926_102990341	3300031954	Soil	TDELKRQAAFRWLGDEAEAQRLQQEQTYVRWTFLVAVAAVIAGLIAVGLALLR
Ga0306926_106230381	3300031954	Soil	RCKRATSGDGLTDELKRQAAFRWLGDEAEAQRLRQEQTYHYVRWRFLVAVAAVIAGLIAVGLTLLN
Ga0306926_109104522	3300031954	Soil	LFAALHESAAFRWLGDEAEVQRLQQDQTYHYVRWTFLVVLGVVIAGLIAAGLALLR
Ga0306926_110603071	3300031954	Soil	KRQAALGWLGDEVEARRLREEKTYHYVRGTLLIVVAAVIAGLIAVGLAQLR
Ga0306926_129680841	3300031954	Soil	LRDALAGGVFTDEKRQAAFRWLDDEAEAQRLQQEQTYHYIRWAFLIAVAVVIAGLIALGLSLLR
Ga0318530_100269203	3300031959	Soil	EKSQAAFRWLGDQAEARRLQQEQTYHYIKWTFLIAVAVVIAGVIALGLSLLR
Ga0306922_100750841	3300032001	Soil	QAALRWLGDEVEARRLREEKTSHYVRGTLLIVVAAVIAGLIAVGLAQLR
Ga0306922_100772791	3300032001	Soil	LKRQAAFRWLGDEAEARRLQQEQTYHYVRWTFLVAVAAVIAGLIAVGLALLG
Ga0306922_101333178	3300032001	Soil	EKTQAAFRWLGDEAEARRLKQEQTYHYIKWTFLIAVAVVIAGLIALGLSLLR
Ga0310911_102714311	3300032035	Soil	MKELRDAPGGNGLTDELKTQAAFRWLGDEAEAQRLQRDQTYHYVRWIFLIAVAAVIADVIAVGLARLS
Ga0310911_103945501	3300032035	Soil	LKRQEAFRWLGDEAEAQRLQQEQAYHYVRWIFLVAVAAVIAGLIAVGLALLG
Ga0310911_104470521	3300032035	Soil	AFRWLGDEAEARRLKQEQTYHYIKWTFLIAVAVVIAGLIALGLSLLR
Ga0310911_104695031	3300032035	Soil	KRATSGDGLTDELKWQAAFRWLGDEAEAQRLRQEQTYHYVRWRFLVAVAAVIAGLIAVGLTLLN
Ga0310911_106535151	3300032035	Soil	EKSQAAFRWLGDEAEARRLQQEQTYHYIKWTFLIAVAVVIAGVIALGLSLLR
Ga0310911_109299552	3300032035	Soil	GDEVEARRLREEKTYHYVRGTLLIVVAAVIASLIAAGLAQLR
Ga0318556_100436796	3300032043	Soil	WLGDEAEAQRLQQEQTYHYVRWSFLVAVAAVIAGLIAVGLALLG
Ga0306924_100838631	3300032076	Soil	ADEKTQAAFRWLGDEAEARRLQQEQTYHYIKWTFLIAVAVVIAGVIALGLSLLR
Ga0306924_101005571	3300032076	Soil	FRWLGDEAEAQRLQQEQTYHYVRWTFLVAVAAVIAGLIAVGLALLG
Ga0306924_105434183	3300032076	Soil	AFRWLGDEAEARRLQQEQTYHYIKWTFLIAVAVVIAGLIALGLSLLR
Ga0306924_108083561	3300032076	Soil	DALGGGGLADEKTQAAFRWLGDEAEARRLKQEQTYHYIKWTFSIAVAVVIAGLIALGLSLLR
Ga0318540_106686231	3300032094	Soil	LGDEAEAQRLQQEQAYHYVRWIFLVAVAAVIAGLIAVGLALLG
Ga0311301_107415552	3300032160	Peatlands Soil	MADELKTQAAFHWVGDEAQAQRLREEKTTHHIRWTFVAAIAAVIVALIALGLTLLH
Ga0307471_1012823831	3300032180	Hardwood Forest Soil	SGVGIADEPKRQAAFRWLGDEAEERRLREEKAYHYFRWTFFAAIAAVIVGLIGVGLTFLH
Ga0307471_1030095622	3300032180	Hardwood Forest Soil	NELKTQAAFRWLGDESEAQRLQQEHTYHYVRWTFLVALAAVIAGLIAVGLALLR
Ga0306920_1005317882	3300032261	Soil	KSQAAFRWLGDEAEARRLQQEQTYHYIKWTFSIAVAVVIAGLIALGLSLLR
Ga0306920_1014589291	3300032261	Soil	DGFTDELKRQAALRWLGDEVEARRLREEKTSHYVRGTLLIVVAAVIAGLIAVGLAQLR
Ga0306920_1020364872	3300032261	Soil	AAFRWLGDEAEARRLQQEQTYHYIKWTFLIAVAVVIAGLIALGLSLLR
Ga0306920_1027185112	3300032261	Soil	AGGLADEKSQAAFRWLGDEAEARRLKQEHTYHYIKWTFLIAVAVVIAGFIALGLSLLH
Ga0306920_1034424512	3300032261	Soil	AAFRWLGDEAEAQRLQQEQTYHYVGWSFLVAVAAVIAGLIAVGLVLLG
Ga0335077_118540802	3300033158	Soil	FNWSGDESERQRLQEQKSYHYVRWTFFVGIAVVIVSIIGVGLTLLH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F035088

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences