Basic Information | |
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Family ID | F035133 |
Family Type | Metagenome |
Number of Sequences | 173 |
Average Sequence Length | 61 residues |
Representative Sequence | MANVFTDRTSRTAIAARIAEERQVESWNELAAPEDYDLSLDKIEYQIRPAKWPWLVYII |
Number of Associated Samples | 142 |
Number of Associated Scaffolds | 173 |
Quality Assessment | |
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Transcriptomic Evidence | No |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 62.43 % |
% of genes near scaffold ends (potentially truncated) | 36.42 % |
% of genes from short scaffolds (< 2000 bps) | 82.08 % |
Associated GOLD sequencing projects | 128 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.27 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (51.445 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (10.405 % of family members) |
Environment Ontology (ENVO) | Unclassified (33.526 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant rhizosphere (47.399 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 28.74% β-sheet: 0.00% Coil/Unstructured: 71.26% | Feature Viewer |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.27 |
Powered by PDBe Molstar |
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Pfam ID | Name | % Frequency in 173 Family Scaffolds |
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PF03401 | TctC | 4.62 |
PF13426 | PAS_9 | 4.62 |
PF04392 | ABC_sub_bind | 3.47 |
PF13185 | GAF_2 | 3.47 |
PF03466 | LysR_substrate | 2.89 |
PF02729 | OTCace_N | 1.73 |
PF00534 | Glycos_transf_1 | 1.73 |
PF01183 | Glyco_hydro_25 | 1.73 |
PF00072 | Response_reg | 1.16 |
PF09084 | NMT1 | 1.16 |
PF04321 | RmlD_sub_bind | 1.16 |
PF03006 | HlyIII | 1.16 |
PF05065 | Phage_capsid | 1.16 |
PF02627 | CMD | 0.58 |
PF13432 | TPR_16 | 0.58 |
PF12071 | DUF3551 | 0.58 |
PF05521 | Phage_H_T_join | 0.58 |
PF07369 | DUF1488 | 0.58 |
PF13472 | Lipase_GDSL_2 | 0.58 |
PF13579 | Glyco_trans_4_4 | 0.58 |
PF00486 | Trans_reg_C | 0.58 |
PF13302 | Acetyltransf_3 | 0.58 |
PF06912 | DUF1275 | 0.58 |
PF13460 | NAD_binding_10 | 0.58 |
PF00239 | Resolvase | 0.58 |
PF01757 | Acyl_transf_3 | 0.58 |
PF04828 | GFA | 0.58 |
PF10282 | Lactonase | 0.58 |
PF13649 | Methyltransf_25 | 0.58 |
PF13531 | SBP_bac_11 | 0.58 |
PF07883 | Cupin_2 | 0.58 |
PF08734 | GYD | 0.58 |
PF00668 | Condensation | 0.58 |
PF13628 | DUF4142 | 0.58 |
COG ID | Name | Functional Category | % Frequency in 173 Family Scaffolds |
---|---|---|---|
COG3181 | Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC | Energy production and conversion [C] | 4.62 |
COG2984 | ABC-type uncharacterized transport system, periplasmic component | General function prediction only [R] | 3.47 |
COG0451 | Nucleoside-diphosphate-sugar epimerase | Cell wall/membrane/envelope biogenesis [M] | 2.31 |
COG0702 | Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains | General function prediction only [R] | 2.31 |
COG1086 | NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC | Cell wall/membrane/envelope biogenesis [M] | 2.31 |
COG3757 | Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family | Cell wall/membrane/envelope biogenesis [M] | 1.73 |
COG0715 | ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component | Inorganic ion transport and metabolism [P] | 1.16 |
COG1087 | UDP-glucose 4-epimerase | Cell wall/membrane/envelope biogenesis [M] | 1.16 |
COG1088 | dTDP-D-glucose 4,6-dehydratase | Cell wall/membrane/envelope biogenesis [M] | 1.16 |
COG1089 | GDP-D-mannose dehydratase | Cell wall/membrane/envelope biogenesis [M] | 1.16 |
COG1090 | NAD dependent epimerase/dehydratase family enzyme | General function prediction only [R] | 1.16 |
COG1091 | dTDP-4-dehydrorhamnose reductase | Cell wall/membrane/envelope biogenesis [M] | 1.16 |
COG1272 | Predicted membrane channel-forming protein YqfA, hemolysin III family | Intracellular trafficking, secretion, and vesicular transport [U] | 1.16 |
COG4521 | ABC-type taurine transport system, periplasmic component | Inorganic ion transport and metabolism [P] | 1.16 |
COG4653 | Predicted phage phi-C31 gp36 major capsid-like protein | Mobilome: prophages, transposons [X] | 1.16 |
COG0599 | Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family | General function prediction only [R] | 0.58 |
COG1020 | EntF, seryl-AMP synthase component of non-ribosomal peptide synthetase | Secondary metabolites biosynthesis, transport and catabolism [Q] | 0.58 |
COG1961 | Site-specific DNA recombinase SpoIVCA/DNA invertase PinE | Replication, recombination and repair [L] | 0.58 |
COG2128 | Alkylhydroperoxidase family enzyme, contains CxxC motif | Inorganic ion transport and metabolism [P] | 0.58 |
COG2452 | Predicted site-specific integrase-resolvase | Mobilome: prophages, transposons [X] | 0.58 |
COG3619 | Uncharacterized membrane protein YoaK, UPF0700 family | Function unknown [S] | 0.58 |
COG3791 | Uncharacterized conserved protein | Function unknown [S] | 0.58 |
COG4274 | Uncharacterized conserved protein, contains GYD domain | Function unknown [S] | 0.58 |
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Name | Rank | Taxonomy | Distribution |
Unclassified | root | N/A | 51.45 % |
All Organisms | root | All Organisms | 48.55 % |
Visualization |
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Powered by ApexCharts |
Scaffold | Taxonomy | Length | IMG/M Link |
---|---|---|---|
2140918013|NODE_377348_length_1283_cov_4.921278 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → unclassified Spartobacteria → Spartobacteria bacterium | 1315 | Open in IMG/M |
2162886007|SwRhRL2b_contig_559658 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 980 | Open in IMG/M |
2162886012|MBSR1b_contig_9372800 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 3280 | Open in IMG/M |
2170459019|G14TP7Y01BUOW2 | Not Available | 521 | Open in IMG/M |
2209111006|2214786879 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 2314 | Open in IMG/M |
3300000033|ICChiseqgaiiDRAFT_c2245936 | Not Available | 531 | Open in IMG/M |
3300000041|ARcpr5oldR_c006670 | Not Available | 983 | Open in IMG/M |
3300000043|ARcpr5yngRDRAFT_c000491 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 5098 | Open in IMG/M |
3300000363|ICChiseqgaiiFebDRAFT_10804177 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → unclassified Spartobacteria → Spartobacteria bacterium | 629 | Open in IMG/M |
3300000363|ICChiseqgaiiFebDRAFT_11120765 | All Organisms → cellular organisms → Bacteria | 695 | Open in IMG/M |
3300000364|INPhiseqgaiiFebDRAFT_101584419 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales | 1178 | Open in IMG/M |
3300000955|JGI1027J12803_103950520 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 613 | Open in IMG/M |
3300000956|JGI10216J12902_114880998 | Not Available | 544 | Open in IMG/M |
3300003994|Ga0055435_10059328 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 942 | Open in IMG/M |
3300003995|Ga0055438_10022764 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 1437 | Open in IMG/M |
3300004114|Ga0062593_100164680 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 1707 | Open in IMG/M |
3300004156|Ga0062589_100255747 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. M7A.F.Ca.US.011.01.1.1 | 1317 | Open in IMG/M |
3300004156|Ga0062589_100988383 | Not Available | 785 | Open in IMG/M |
3300004156|Ga0062589_101087481 | Not Available | 755 | Open in IMG/M |
3300004157|Ga0062590_102600567 | Not Available | 538 | Open in IMG/M |
3300004463|Ga0063356_101520522 | Not Available | 992 | Open in IMG/M |
3300004463|Ga0063356_101531234 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 989 | Open in IMG/M |
3300004463|Ga0063356_102933245 | Not Available | 735 | Open in IMG/M |
3300004479|Ga0062595_100874705 | Not Available | 753 | Open in IMG/M |
3300005146|Ga0066817_1025358 | Not Available | 568 | Open in IMG/M |
3300005162|Ga0066814_10068448 | Not Available | 618 | Open in IMG/M |
3300005165|Ga0066869_10101744 | Not Available | 576 | Open in IMG/M |
3300005168|Ga0066809_10003863 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 2540 | Open in IMG/M |
3300005213|Ga0068998_10118596 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 607 | Open in IMG/M |
3300005276|Ga0065717_1005815 | Not Available | 849 | Open in IMG/M |
3300005277|Ga0065716_1000251 | Not Available | 1715 | Open in IMG/M |
3300005294|Ga0065705_10131206 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 2447 | Open in IMG/M |
3300005328|Ga0070676_10000023 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 47258 | Open in IMG/M |
3300005329|Ga0070683_102434778 | Not Available | 502 | Open in IMG/M |
3300005330|Ga0070690_100001199 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 13393 | Open in IMG/M |
3300005332|Ga0066388_100298194 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 2256 | Open in IMG/M |
3300005332|Ga0066388_100972020 | Not Available | 1417 | Open in IMG/M |
3300005334|Ga0068869_100615465 | Not Available | 919 | Open in IMG/M |
3300005336|Ga0070680_100022582 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium | 5013 | Open in IMG/M |
3300005336|Ga0070680_100427187 | Not Available | 1130 | Open in IMG/M |
3300005339|Ga0070660_100000903 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 19856 | Open in IMG/M |
3300005339|Ga0070660_101493527 | Not Available | 574 | Open in IMG/M |
3300005344|Ga0070661_100661910 | Not Available | 848 | Open in IMG/M |
3300005367|Ga0070667_100000466 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 41622 | Open in IMG/M |
3300005406|Ga0070703_10092452 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. M7A.F.Ca.US.011.01.1.1 | 1051 | Open in IMG/M |
3300005445|Ga0070708_100016127 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 6192 | Open in IMG/M |
3300005457|Ga0070662_100462348 | Not Available | 1055 | Open in IMG/M |
3300005457|Ga0070662_101519030 | Not Available | 578 | Open in IMG/M |
3300005459|Ga0068867_100442497 | Not Available | 1105 | Open in IMG/M |
3300005471|Ga0070698_101837240 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium manausense | 559 | Open in IMG/M |
3300005518|Ga0070699_100979882 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 775 | Open in IMG/M |
3300005535|Ga0070684_101138429 | Not Available | 734 | Open in IMG/M |
3300005547|Ga0070693_100022598 | All Organisms → cellular organisms → Bacteria | 3347 | Open in IMG/M |
3300005548|Ga0070665_100497138 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 1231 | Open in IMG/M |
3300005617|Ga0068859_100137745 | All Organisms → cellular organisms → Bacteria | 2514 | Open in IMG/M |
3300005713|Ga0066905_100251800 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1358 | Open in IMG/M |
3300005713|Ga0066905_100965544 | Not Available | 749 | Open in IMG/M |
3300005719|Ga0068861_101387187 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 686 | Open in IMG/M |
3300005937|Ga0081455_10006647 | All Organisms → cellular organisms → Bacteria | 12361 | Open in IMG/M |
3300006844|Ga0075428_100388326 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. cf659 | 1496 | Open in IMG/M |
3300006854|Ga0075425_100193524 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 2337 | Open in IMG/M |
3300006969|Ga0075419_10817979 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. cf659 | 668 | Open in IMG/M |
3300009011|Ga0105251_10042470 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 2206 | Open in IMG/M |
3300009148|Ga0105243_12318763 | Not Available | 574 | Open in IMG/M |
3300009156|Ga0111538_10616148 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium | 1376 | Open in IMG/M |
3300009162|Ga0075423_10330242 | All Organisms → cellular organisms → Bacteria | 1599 | Open in IMG/M |
3300009162|Ga0075423_10418375 | All Organisms → cellular organisms → Bacteria | 1407 | Open in IMG/M |
3300010046|Ga0126384_10784691 | Not Available | 851 | Open in IMG/M |
3300010362|Ga0126377_11008710 | Not Available | 899 | Open in IMG/M |
3300010371|Ga0134125_10734397 | Not Available | 1088 | Open in IMG/M |
3300010397|Ga0134124_10129624 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis | 2229 | Open in IMG/M |
3300010399|Ga0134127_10742178 | Not Available | 1026 | Open in IMG/M |
3300010403|Ga0134123_11849434 | Not Available | 658 | Open in IMG/M |
3300012285|Ga0137370_10178460 | All Organisms → cellular organisms → Bacteria | 1239 | Open in IMG/M |
3300012478|Ga0157328_1028347 | Not Available | 516 | Open in IMG/M |
3300012480|Ga0157346_1004409 | All Organisms → cellular organisms → Bacteria | 831 | Open in IMG/M |
3300012486|Ga0157331_1034424 | Not Available | 520 | Open in IMG/M |
3300012489|Ga0157349_1007307 | Not Available | 820 | Open in IMG/M |
3300012490|Ga0157322_1021658 | Not Available | 624 | Open in IMG/M |
3300012495|Ga0157323_1002764 | Not Available | 1004 | Open in IMG/M |
3300012896|Ga0157303_10117759 | Not Available | 669 | Open in IMG/M |
3300012911|Ga0157301_10323503 | Not Available | 571 | Open in IMG/M |
3300012957|Ga0164303_10342793 | All Organisms → cellular organisms → Bacteria | 900 | Open in IMG/M |
3300012957|Ga0164303_10503611 | Not Available | 776 | Open in IMG/M |
3300012958|Ga0164299_10434310 | Not Available | 854 | Open in IMG/M |
3300012958|Ga0164299_11063976 | Not Available | 601 | Open in IMG/M |
3300012984|Ga0164309_10684309 | Not Available | 812 | Open in IMG/M |
3300012987|Ga0164307_10015449 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 3825 | Open in IMG/M |
3300014299|Ga0075303_1028655 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 861 | Open in IMG/M |
3300014308|Ga0075354_1014694 | Not Available | 1185 | Open in IMG/M |
3300015371|Ga0132258_10137357 | All Organisms → cellular organisms → Bacteria | 5843 | Open in IMG/M |
3300015371|Ga0132258_11269665 | All Organisms → cellular organisms → Bacteria | 1861 | Open in IMG/M |
3300015371|Ga0132258_11687902 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 1598 | Open in IMG/M |
3300015371|Ga0132258_11746668 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium | 1569 | Open in IMG/M |
3300015371|Ga0132258_13508535 | Not Available | 1074 | Open in IMG/M |
3300015372|Ga0132256_100017858 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 6255 | Open in IMG/M |
3300015372|Ga0132256_101379116 | Not Available | 817 | Open in IMG/M |
3300015372|Ga0132256_102381630 | Not Available | 632 | Open in IMG/M |
3300015373|Ga0132257_100072199 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae | 3907 | Open in IMG/M |
3300015374|Ga0132255_102607579 | Not Available | 772 | Open in IMG/M |
3300015374|Ga0132255_103295076 | Not Available | 688 | Open in IMG/M |
3300019356|Ga0173481_10122812 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium | 1033 | Open in IMG/M |
3300019361|Ga0173482_10000007 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 36692 | Open in IMG/M |
3300019361|Ga0173482_10022642 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Myxococcus → unclassified Myxococcus → Myxococcus sp. RHSTA-1-4 | 1805 | Open in IMG/M |
3300022899|Ga0247795_1000110 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 12572 | Open in IMG/M |
3300023260|Ga0247798_1002460 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 2251 | Open in IMG/M |
3300023261|Ga0247796_1000009 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 38891 | Open in IMG/M |
3300023261|Ga0247796_1002198 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 2466 | Open in IMG/M |
3300025538|Ga0210132_1010728 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 1229 | Open in IMG/M |
3300025899|Ga0207642_10396060 | All Organisms → cellular organisms → Bacteria | 825 | Open in IMG/M |
3300025907|Ga0207645_10580392 | Not Available | 761 | Open in IMG/M |
3300025912|Ga0207707_10263924 | Not Available | 1493 | Open in IMG/M |
3300025919|Ga0207657_10245358 | Not Available | 1429 | Open in IMG/M |
3300025920|Ga0207649_10994725 | Not Available | 660 | Open in IMG/M |
3300025923|Ga0207681_11141660 | Not Available | 654 | Open in IMG/M |
3300025930|Ga0207701_10196248 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1775 | Open in IMG/M |
3300025930|Ga0207701_10221750 | Not Available | 1656 | Open in IMG/M |
3300025930|Ga0207701_10568371 | Not Available | 967 | Open in IMG/M |
3300025934|Ga0207686_11516722 | Not Available | 553 | Open in IMG/M |
3300025937|Ga0207669_11547789 | Not Available | 566 | Open in IMG/M |
3300025938|Ga0207704_11625927 | Not Available | 555 | Open in IMG/M |
3300025944|Ga0207661_10478375 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium | 1137 | Open in IMG/M |
3300025960|Ga0207651_11211355 | Not Available | 678 | Open in IMG/M |
3300026047|Ga0208658_1020539 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 545 | Open in IMG/M |
3300026078|Ga0207702_10305308 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. M7A.F.Ca.US.011.01.1.1 | 1511 | Open in IMG/M |
3300026089|Ga0207648_10194777 | Not Available | 1797 | Open in IMG/M |
3300026095|Ga0207676_12495885 | Not Available | 514 | Open in IMG/M |
3300026344|Ga0256800_1012969 | Not Available | 519 | Open in IMG/M |
3300026452|Ga0256821_1003467 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae | 1420 | Open in IMG/M |
3300026464|Ga0256814_1043537 | Not Available | 560 | Open in IMG/M |
3300026733|Ga0207550_100971 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. M7A.F.Ca.US.011.01.1.1 | 810 | Open in IMG/M |
3300026827|Ga0207591_106567 | Not Available | 580 | Open in IMG/M |
3300026841|Ga0207490_1007131 | Not Available | 576 | Open in IMG/M |
3300026905|Ga0207516_1004813 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 995 | Open in IMG/M |
3300026995|Ga0208761_1016843 | Not Available | 672 | Open in IMG/M |
3300026995|Ga0208761_1026834 | Not Available | 570 | Open in IMG/M |
3300027036|Ga0207467_1002411 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. M7A.F.Ca.US.011.01.1.1 | 1264 | Open in IMG/M |
3300027401|Ga0208637_1003029 | Not Available | 1415 | Open in IMG/M |
3300027427|Ga0207472_101979 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 779 | Open in IMG/M |
3300027523|Ga0208890_1019193 | Not Available | 973 | Open in IMG/M |
3300027873|Ga0209814_10123132 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1106 | Open in IMG/M |
3300027876|Ga0209974_10049068 | Not Available | 1416 | Open in IMG/M |
3300027876|Ga0209974_10425865 | Not Available | 524 | Open in IMG/M |
3300028379|Ga0268266_10839538 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium | 888 | Open in IMG/M |
3300028381|Ga0268264_10680888 | All Organisms → cellular organisms → Bacteria | 1020 | Open in IMG/M |
3300028597|Ga0247820_11167255 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium manausense | 555 | Open in IMG/M |
3300028802|Ga0307503_10579679 | Not Available | 616 | Open in IMG/M |
3300028807|Ga0307305_10113246 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. cf659 | 1253 | Open in IMG/M |
3300028889|Ga0247827_10833646 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium manausense | 614 | Open in IMG/M |
(restricted) 3300031150|Ga0255311_1003619 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 2969 | Open in IMG/M |
(restricted) 3300031150|Ga0255311_1005266 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 2525 | Open in IMG/M |
3300031226|Ga0307497_10266433 | Not Available | 772 | Open in IMG/M |
3300031231|Ga0170824_118727636 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1601 | Open in IMG/M |
3300031231|Ga0170824_122736986 | Not Available | 595 | Open in IMG/M |
3300031474|Ga0170818_105975127 | All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium | 742 | Open in IMG/M |
3300031547|Ga0310887_10365177 | Not Available | 841 | Open in IMG/M |
3300031716|Ga0310813_11050808 | All Organisms → cellular organisms → Bacteria | 744 | Open in IMG/M |
3300031716|Ga0310813_11713197 | Not Available | 589 | Open in IMG/M |
3300031854|Ga0310904_11215960 | Not Available | 543 | Open in IMG/M |
3300031858|Ga0310892_10323149 | Not Available | 981 | Open in IMG/M |
3300031908|Ga0310900_10842457 | Not Available | 744 | Open in IMG/M |
3300031940|Ga0310901_10193477 | Not Available | 806 | Open in IMG/M |
3300032013|Ga0310906_10755363 | Not Available | 683 | Open in IMG/M |
3300032075|Ga0310890_10132728 | Not Available | 1620 | Open in IMG/M |
3300032075|Ga0310890_10356876 | Not Available | 1071 | Open in IMG/M |
3300032174|Ga0307470_10798681 | Not Available | 731 | Open in IMG/M |
3300032179|Ga0310889_10001022 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium | 6910 | Open in IMG/M |
3300032180|Ga0307471_103310987 | Not Available | 571 | Open in IMG/M |
3300032180|Ga0307471_103795543 | Not Available | 534 | Open in IMG/M |
3300032421|Ga0310812_10276465 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 743 | Open in IMG/M |
3300033004|Ga0335084_12426305 | Not Available | 505 | Open in IMG/M |
3300033513|Ga0316628_100165376 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium 64-17 | 2611 | Open in IMG/M |
3300034090|Ga0326723_0393441 | Not Available | 629 | Open in IMG/M |
Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
⦗Top⦘ |
Habitat | Taxonomy | Distribution |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 10.40% |
Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 7.51% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 6.94% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil | 6.36% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 4.62% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 4.05% |
Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 4.05% |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere | 4.05% |
Corn Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere | 3.47% |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 2.89% |
Arabidopsis Thaliana Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere | 2.89% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere | 2.89% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 2.89% |
Natural And Restored Wetlands | Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands | 2.31% |
Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 2.31% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 2.31% |
Tropical Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil | 2.31% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 2.31% |
Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere | 2.31% |
Sediment | Environmental → Aquatic → Freshwater → Wetlands → Sediment → Sediment | 1.73% |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere | 1.73% |
Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil | 1.73% |
Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 1.73% |
Natural And Restored Wetlands | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands | 1.73% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere | 1.73% |
Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere | 1.73% |
Tropical Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil | 1.16% |
Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil | 1.16% |
Sandy Soil | Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil | 1.16% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 1.16% |
Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 0.58% |
Unplanted Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil | 0.58% |
Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.58% |
Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere | 0.58% |
Peat Soil | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil | 0.58% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.58% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere | 0.58% |
Corn Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere | 0.58% |
Tabebuia Heterophylla Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere | 0.58% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.58% |
Switchgrass, Maize And Mischanthus Litter | Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter | 0.58% |
Visualization |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Taxon OID | Sample Name | Habitat Type | IMG/M Link |
---|---|---|---|
2140918013 | Soil microbial communities from Great Prairies - Iowa soil (MSU Assemblies) | Environmental | Open in IMG/M |
2162886007 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 | Host-Associated | Open in IMG/M |
2162886012 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 | Host-Associated | Open in IMG/M |
2170459019 | Litter degradation MG4 | Engineered | Open in IMG/M |
2209111006 | Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample Wild type Col-0 | Host-Associated | Open in IMG/M |
3300000033 | Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil | Environmental | Open in IMG/M |
3300000041 | Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis cpr5 old rhizosphere | Host-Associated | Open in IMG/M |
3300000043 | Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis cpr5 young rhizosphere | Host-Associated | Open in IMG/M |
3300000363 | Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil | Environmental | Open in IMG/M |
3300000364 | Soil microbial communities from Great Prairies - Iowa, Native Prairie soil | Environmental | Open in IMG/M |
3300000955 | Soil microbial communities from Great Prairies - Iowa, Native Prairie soil | Environmental | Open in IMG/M |
3300000956 | Soil microbial communities from Great Prairies - Kansas, Native Prairie soil | Environmental | Open in IMG/M |
3300003994 | Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D2 | Environmental | Open in IMG/M |
3300003995 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D2 | Environmental | Open in IMG/M |
3300004114 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5 | Environmental | Open in IMG/M |
3300004156 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1 | Environmental | Open in IMG/M |
3300004157 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2 | Environmental | Open in IMG/M |
3300004463 | Combined assembly of Arabidopsis thaliana microbial communities | Host-Associated | Open in IMG/M |
3300004479 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs | Environmental | Open in IMG/M |
3300005146 | Soil and rhizosphere microbial communities from Laval, Canada - mgHAB | Environmental | Open in IMG/M |
3300005162 | Soil and rhizosphere microbial communities from Laval, Canada - mgLAB | Environmental | Open in IMG/M |
3300005165 | Soil and rhizosphere microbial communities from Laval, Canada - mgHMC | Environmental | Open in IMG/M |
3300005168 | Soil and rhizosphere microbial communities from Laval, Canada - mgLPC | Environmental | Open in IMG/M |
3300005213 | Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleB_D2 | Environmental | Open in IMG/M |
3300005276 | Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample Mutant cpr5 | Host-Associated | Open in IMG/M |
3300005277 | Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample Wild type Col-0 | Host-Associated | Open in IMG/M |
3300005294 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil | Environmental | Open in IMG/M |
3300005328 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG | Host-Associated | Open in IMG/M |
3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Environmental | Open in IMG/M |
3300005330 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG | Environmental | Open in IMG/M |
3300005332 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly) | Environmental | Open in IMG/M |
3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Host-Associated | Open in IMG/M |
3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Environmental | Open in IMG/M |
3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Host-Associated | Open in IMG/M |
3300005344 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG | Host-Associated | Open in IMG/M |
3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Host-Associated | Open in IMG/M |
3300005406 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG | Environmental | Open in IMG/M |
3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Environmental | Open in IMG/M |
3300005457 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG | Host-Associated | Open in IMG/M |
3300005459 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 | Host-Associated | Open in IMG/M |
3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Environmental | Open in IMG/M |
3300005518 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG | Environmental | Open in IMG/M |
3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Environmental | Open in IMG/M |
3300005547 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG | Environmental | Open in IMG/M |
3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Host-Associated | Open in IMG/M |
3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Host-Associated | Open in IMG/M |
3300005713 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2) | Environmental | Open in IMG/M |
3300005719 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 | Host-Associated | Open in IMG/M |
3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Host-Associated | Open in IMG/M |
3300006844 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Host-Associated | Open in IMG/M |
3300006854 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4 | Host-Associated | Open in IMG/M |
3300006969 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 | Host-Associated | Open in IMG/M |
3300009011 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG | Host-Associated | Open in IMG/M |
3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Host-Associated | Open in IMG/M |
3300009156 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2) | Host-Associated | Open in IMG/M |
3300009162 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2 | Host-Associated | Open in IMG/M |
3300010046 | Tropical forest soil microbial communities from Panama - MetaG Plot_36 | Environmental | Open in IMG/M |
3300010362 | Tropical forest soil microbial communities from Panama - MetaG Plot_22 | Environmental | Open in IMG/M |
3300010371 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1 | Environmental | Open in IMG/M |
3300010397 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4 | Environmental | Open in IMG/M |
3300010399 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3 | Environmental | Open in IMG/M |
3300010403 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3 | Environmental | Open in IMG/M |
3300012285 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG | Environmental | Open in IMG/M |
3300012478 | Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.9.old.080610 | Host-Associated | Open in IMG/M |
3300012480 | Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.5.yng.040610 | Host-Associated | Open in IMG/M |
3300012486 | Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.120510 | Environmental | Open in IMG/M |
3300012489 | Unplanted soil (control) microbial communities from North Carolina - M.Soil.5.yng.040610 | Environmental | Open in IMG/M |
3300012490 | Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.4.old.040610 | Host-Associated | Open in IMG/M |
3300012495 | Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.5.old.040610 | Host-Associated | Open in IMG/M |
3300012896 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2 | Environmental | Open in IMG/M |
3300012911 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2 | Environmental | Open in IMG/M |
3300012957 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG | Environmental | Open in IMG/M |
3300012958 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG | Environmental | Open in IMG/M |
3300012984 | Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG | Environmental | Open in IMG/M |
3300012987 | Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG | Environmental | Open in IMG/M |
3300014299 | Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleC_D1 | Environmental | Open in IMG/M |
3300014308 | Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleC_D1 | Environmental | Open in IMG/M |
3300015371 | Combined assembly of cpr5 and col0 rhizosphere and soil | Host-Associated | Open in IMG/M |
3300015372 | Soil combined assembly | Host-Associated | Open in IMG/M |
3300015373 | Combined assembly of cpr5 rhizosphere | Host-Associated | Open in IMG/M |
3300015374 | Col-0 rhizosphere combined assembly | Host-Associated | Open in IMG/M |
3300019356 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2) | Environmental | Open in IMG/M |
3300019361 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2) | Environmental | Open in IMG/M |
3300022899 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S016-104C-6 | Environmental | Open in IMG/M |
3300023260 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S197-509C-6 | Environmental | Open in IMG/M |
3300023261 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S166-409R-6 | Environmental | Open in IMG/M |
3300025538 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleC_D2 (SPAdes) | Environmental | Open in IMG/M |
3300025899 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300025907 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) | Environmental | Open in IMG/M |
3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025920 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025923 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025930 | Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) | Environmental | Open in IMG/M |
3300025934 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025937 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025938 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) | Environmental | Open in IMG/M |
3300025960 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300026047 | Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D1_rd (SPAdes) | Environmental | Open in IMG/M |
3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026344 | Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 10-16 C5 | Environmental | Open in IMG/M |
3300026452 | Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 7-17 PU4 | Environmental | Open in IMG/M |
3300026464 | Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 7-17 CS5 | Environmental | Open in IMG/M |
3300026733 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G08A1-12 (SPAdes) | Environmental | Open in IMG/M |
3300026827 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G09A4-11 (SPAdes) | Environmental | Open in IMG/M |
3300026841 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G06A3a-10 (SPAdes) | Environmental | Open in IMG/M |
3300026905 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G01A4-10 (SPAdes) | Environmental | Open in IMG/M |
3300026995 | Soil and rhizosphere microbial communities from Laval, Canada - mgLAB (SPAdes) | Environmental | Open in IMG/M |
3300027036 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G07A5-10 (SPAdes) | Environmental | Open in IMG/M |
3300027401 | Soil and rhizosphere microbial communities from Laval, Canada - mgLAC (SPAdes) | Environmental | Open in IMG/M |
3300027427 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G08A2-11 (SPAdes) | Environmental | Open in IMG/M |
3300027523 | Soil and rhizosphere microbial communities from Laval, Canada - mgHPA (SPAdes) | Environmental | Open in IMG/M |
3300027873 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes) | Host-Associated | Open in IMG/M |
3300027876 | Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) | Host-Associated | Open in IMG/M |
3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300028597 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14 | Environmental | Open in IMG/M |
3300028802 | Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S | Environmental | Open in IMG/M |
3300028807 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186 | Environmental | Open in IMG/M |
3300028889 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2 | Environmental | Open in IMG/M |
3300031150 (restricted) | Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH4_T0_E4 | Environmental | Open in IMG/M |
3300031226 | Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S | Environmental | Open in IMG/M |
3300031231 | Coassembly Site 11 (all samples) - Champenoux / Amance forest | Environmental | Open in IMG/M |
3300031474 | Fir Coassembly Site 11 - Champenoux / Amance forest | Environmental | Open in IMG/M |
3300031547 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4 | Environmental | Open in IMG/M |
3300031716 | Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3 | Environmental | Open in IMG/M |
3300031854 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1 | Environmental | Open in IMG/M |
3300031858 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2 | Environmental | Open in IMG/M |
3300031908 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1 | Environmental | Open in IMG/M |
3300031940 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2 | Environmental | Open in IMG/M |
3300032013 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3 | Environmental | Open in IMG/M |
3300032075 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3 | Environmental | Open in IMG/M |
3300032174 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05 | Environmental | Open in IMG/M |
3300032179 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2 | Environmental | Open in IMG/M |
3300032180 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515 | Environmental | Open in IMG/M |
3300032421 | Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3 | Environmental | Open in IMG/M |
3300033004 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4 | Environmental | Open in IMG/M |
3300033513 | Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C | Environmental | Open in IMG/M |
3300034090 | Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N | Environmental | Open in IMG/M |
Geographical Distribution | |
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Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Protein ID | Sample Taxon ID | Habitat | Sequence |
Iowa-Corn-GraphCirc_00765160 | 2140918013 | Soil | MSNTFEKWSSRVAVAARVAQERRRPENWNEMPEEEYDQPLDKVEVQTKAAKWPWNVYII |
SwRhRL2b_0395.00007420 | 2162886007 | Switchgrass Rhizosphere | MANVFTDRTSRTAIAARIAEERQVESWNELAVPEDYDLSLDKIEYQIRPTK |
MBSR1b_0362.00005590 | 2162886012 | Miscanthus Rhizosphere | MAKVFTDRTSRTAIDARIAEERRNPVESWNELTAAREDNDLSFDKVEYEIKPAKWPWLVHII |
4MG_05180150 | 2170459019 | Switchgrass, Maize And Mischanthus Litter | MANAFTEWTSRTAIAARITQERQVESWNELAATEDYDLSLDKIEYQIRPAKWPWLVYII |
2213811589 | 2209111006 | Arabidopsis Rhizosphere | MANVFTDRTSRTAIAARIAEERQVESWNELXXPEDXDLSLDKIEYQIRPXKWPWLVYII |
ICChiseqgaiiDRAFT_22459362 | 3300000033 | Soil | LRLEVPMANVFTDWTSRSAIAARIAEEREHPVESWNELIAPEDYDLPFDKIEYQVRPAKWPWLV |
ARcpr5oldR_0066703 | 3300000041 | Arabidopsis Rhizosphere | MANVFTDRTSRTAIAARIAEERQVESWNELAVPEDYDLSLDKIEYQIRPTKWPWLVYII* |
ARcpr5yngRDRAFT_0004911 | 3300000043 | Arabidopsis Rhizosphere | MANVFTDRTSRTAIAARIAEERQVESWNELXXPEDXDLSLDKIEYQIRPXKWPWLVYII* |
ICChiseqgaiiFebDRAFT_108041772 | 3300000363 | Soil | MSNTFEKWSSRVAVAARVAQERRRPENWNEMPEEEYDQPLDKVEVQTKAAKWPWNVYII* |
ICChiseqgaiiFebDRAFT_111207652 | 3300000363 | Soil | MNSKELEAPMSDTFTNWTSRAAVARRVAEERRRPESWNELTIPDDYDMPLDKAEYQTRPAKWPWQVYII* |
INPhiseqgaiiFebDRAFT_1015844191 | 3300000364 | Soil | MANVFTDWTSRAAIASRIAEEQRNPVESWNELEAPEDYDLSFEKIEYQIRPAKWPWLVYII* |
JGI1027J12803_1039505201 | 3300000955 | Soil | MRHMNSKRLEVPMANVFTDWTSRAAIASRIAEEQRNPVESWNELEAPEDYDLSFEKIEYQIRPAKWPWLVYII* |
JGI10216J12902_1148809981 | 3300000956 | Soil | MSDTFTNWTSRAAVARRVAEERRRPEIWNELTIPDDYDMPLDKAEYQTRPAKWPWQVYII |
Ga0055435_100593283 | 3300003994 | Natural And Restored Wetlands | MASAFMDWTSRAAIDARIAEEQRHPVESWNELIVPEDYDLSLEKIEYQIKPAKWPWLVHII* |
Ga0055438_100227643 | 3300003995 | Natural And Restored Wetlands | MASAFMDWTSRAAIDARIAEEQRHPVESWNELIVPEDYDLSLEKIEYQIKPAKWPW |
Ga0062593_1001646803 | 3300004114 | Soil | MANAFMDWTSRVAIDARIAEEQRHPVESWNELVVPEDYDLSLDKIEYQIKPAKWPWLVHII* |
Ga0062589_1002557472 | 3300004156 | Soil | TSRTAIDARIAEERRNPVESWNELTAAREDNDLSFDKVEYEIKPAKWPWLVHII* |
Ga0062589_1009883831 | 3300004156 | Soil | MANIFTDWTSRTAIAARIAAERQSPVESWNELTVPEDYDLSFDKIEYQIKPAKWPWLVHII* |
Ga0062589_1010874811 | 3300004156 | Soil | MANAFTEWTSRTAIAARITQERQVESWNELAATEDYDLSLDKIEYQIRPAKWPWLVYII* |
Ga0062590_1026005671 | 3300004157 | Soil | MANVFTDWTSRTAIAARIAEERKVESWNELAAAEDYDLSLEKIEYQIRPAKWPWLVYII* |
Ga0063356_1015205222 | 3300004463 | Arabidopsis Thaliana Rhizosphere | MANVFVDWTSRAAIDARIAEEQRHPVESWNELIVPEDYDLSLDKIEYQIKPAKWPWLVHII* |
Ga0063356_1015312343 | 3300004463 | Arabidopsis Thaliana Rhizosphere | MANAFMDWTSRAAIDARIAEEQRHPVESWNELIVPEDYDLSLDKVEYQIKPAKWPWLVHII* |
Ga0063356_1029332451 | 3300004463 | Arabidopsis Thaliana Rhizosphere | MANIFTDWTSRSAIAARIAEEREHPVESWNELNAPEDYDLSFDKIEYQIRPARWPWLVHII* |
Ga0062595_1008747051 | 3300004479 | Soil | MANVFTDRTSRTAIAARIAEERQVESWNELAAPADYDLSLDKIEYQIRPAKWP |
Ga0066817_10253581 | 3300005146 | Soil | MANVFTDRTSRTAIAARIAEERQVESWNELAAPADYDLSLDTIEYQIRPAKWPWLVYII* |
Ga0066814_100684481 | 3300005162 | Soil | MANVFTDWTSRAVIAARIAEERWNPVESWNELAAPEDYDLSLDKIEYQIRPAKWPWLVYVI* |
Ga0066869_101017441 | 3300005165 | Soil | MANVFTDRTSRTAIAARIAEERQVESWNELAAPDDYDLSFDKIEYQIRPAKWPWLVYII* |
Ga0066809_100038634 | 3300005168 | Soil | MANVFTDWTSRAVIAARIAEERRNPVESWNELAAPEDYDLSHKIEYQIRPAKWPWLVYII |
Ga0068998_101185961 | 3300005213 | Natural And Restored Wetlands | MASAFMDWTSRTAIDARIAEEQRHPVESWKELIVPEDYDLSLEKIEYQIKPAKWPWLVHII* |
Ga0065717_10058153 | 3300005276 | Arabidopsis Rhizosphere | DVPMANVFTDRTSRTAIAARIAEERQVESWNELSVPEDYDLSLDKIEYQIRPTKWPWLVYII* |
Ga0065716_10002512 | 3300005277 | Arabidopsis Rhizosphere | MANVFTDRTSRTAIAARIAEERQVESWNELSVPEDYDLSLDKIEYQIRPTKWPWLVYII* |
Ga0065705_101312061 | 3300005294 | Switchgrass Rhizosphere | DVPMANVFTDRTSRTAIAARIAEERQVESWNELAAPEDYDLSLDKIEYQIRPAKWPWLVYII* |
Ga0070676_1000002364 | 3300005328 | Miscanthus Rhizosphere | FTDRTSRTAIDARIAEERRNPVESWNELTAAREDNDLSFDKVEYEIKPAKWPWLVHII* |
Ga0070683_1024347781 | 3300005329 | Corn Rhizosphere | MRH*NAKRLDVHMANVFTDWTSRTAIAARIAEEWQVESWNELAAPDDYDLSFDKIEYQIRPAKWPWLVYII*SKVGARQERTAC |
Ga0070690_1000011998 | 3300005330 | Switchgrass Rhizosphere | MAKVFTDWTSRTAIDARIAEERRNPVESWNELTAAREDNDLSFDKVEYEIKPAKWPWLVHII* |
Ga0066388_1002981943 | 3300005332 | Tropical Forest Soil | MANVFTDWTSRAAIATRITEERQNPVESWNELAAPEDYDLSLDKIEYQIKPAKWPWLVHII* |
Ga0066388_1009720203 | 3300005332 | Tropical Forest Soil | MRHMNSKWLEVLMANAFTDWTSRAAIAARIAEEQRNPVESWNELEAPEDYELPFDKIEYQIRPAKWPWLVYII* |
Ga0068869_1006154652 | 3300005334 | Miscanthus Rhizosphere | MANVFTDRTSRTAIAARIAEERQVESWNELAAPEDYDLSLDKIEYQIRPTKWPWLVYII* |
Ga0070680_1000225828 | 3300005336 | Corn Rhizosphere | KRLEVPMAKVFTDRTSRTAIDARIAEERRNPVESWNELTAAREDNDLSFDKVEYEIKPAKWPWLVHII* |
Ga0070680_1004271872 | 3300005336 | Corn Rhizosphere | MANVFTDRTSRTAIAARIAEERQVESWNELAVPEDYDLSLDKIEYQIRPAKWPWLVYII* |
Ga0070660_10000090327 | 3300005339 | Corn Rhizosphere | MAKVFTHWTSRTAIDARIAEERRNPVESWNELTAAREDNDLSFDKVEYEIKPAKWPWLVHII* |
Ga0070660_1014935271 | 3300005339 | Corn Rhizosphere | MLVNTFWTSRVAIAARIAEERRCPESWNELTAPEDYDLPLDKVEYQIRPAKWPWQVYII* |
Ga0070661_1006619101 | 3300005344 | Corn Rhizosphere | MLVNTFWTSRVAIAARIAEERRCPESWNELTAPEDYDLPLDKVEYQIRPAKWPWQVYII*LRADLMFP |
Ga0070667_10000046660 | 3300005367 | Switchgrass Rhizosphere | MAKVFTDRTSRTAIDARIAEERRNPVESWNELTAAREDNDLSFDKVEYEIKPAKWPWLVHII* |
Ga0070703_100924521 | 3300005406 | Corn, Switchgrass And Miscanthus Rhizosphere | AKVFTDRTSRTAIDARIAEERRNPVESWNELTAAREDNDLSFDKVEYEIKPAKWPWLVHII* |
Ga0070708_1000161271 | 3300005445 | Corn, Switchgrass And Miscanthus Rhizosphere | EVPMAKVFTDRTSRTAIDARIAEERRNPVESWNELTAAREDNDLSFDKVEYEIKPAKWPWLVHII* |
Ga0070662_1004623481 | 3300005457 | Corn Rhizosphere | MLVNTFWTSRVAIAARIAEERRCPESWNELTAPEDYDLPLDKVEYQIRPAKWPWQVYII*LRADL |
Ga0070662_1015190301 | 3300005457 | Corn Rhizosphere | MANVFTDRTSRTAIAARIAEERQVESWNELAVPEDYDLSLDKIEYQIRPAKWP |
Ga0068867_1004424972 | 3300005459 | Miscanthus Rhizosphere | MANAFTDWTSRAAIAARVAEEQRNPVESWNELEAPEDYDLSFDKVEYQIRPAKWPWLLYII* |
Ga0070698_1018372402 | 3300005471 | Corn, Switchgrass And Miscanthus Rhizosphere | RTSRTAIDARIAEERRNPVESWNELTAAREDNDLSFDKVEYEIKPAKWPWLVHII* |
Ga0070699_1009798821 | 3300005518 | Corn, Switchgrass And Miscanthus Rhizosphere | MAKVFTDRTSRTAIDARIAEERRNPVESWNELTAAREDNDLSSDKVEYEIKPAKWPWLVHII* |
Ga0070684_1011384291 | 3300005535 | Corn Rhizosphere | MANVFTDRTSRTAIAARIAEERQVESWNELAAPEDYDLSLDKIEYQIRPAKWPWLVYII* |
Ga0070693_1000225984 | 3300005547 | Corn, Switchgrass And Miscanthus Rhizosphere | MNSKHWRMLVNTFWTSRVAIAARIAEERRCPESWNELTAPEDYDLPLDKVEYQIRPAKWPWQVYII* |
Ga0070665_1004971382 | 3300005548 | Switchgrass Rhizosphere | MAKVFTDRTSRTAIDARIAEERRNPVESWNELTAAREDNDLSFDKVEYDIKPAKWPWLVHII* |
Ga0068859_1001377451 | 3300005617 | Switchgrass Rhizosphere | CSKRLEVPMAKVFTDRTSRTAIDARIAEERRNPVESWNELTAAREDNDLSFDKVEYEIKPAKWPWLVHII* |
Ga0066905_1002518001 | 3300005713 | Tropical Forest Soil | VKSKRLEVPMANVFTDWTSRAAIAARIAEEQQNPVEGWNELVVPEDYDLSFNKIEYQIRPAKWPWLVYII* |
Ga0066905_1009655441 | 3300005713 | Tropical Forest Soil | MANAFTDWTSRAAIAARIAEEQRNPVESWNELEAPEDYELPFDKIEYQIRPAKWPWLVYII* |
Ga0068861_1013871872 | 3300005719 | Switchgrass Rhizosphere | MANAFMDWTSRVAIDARIAEEQRHPVESWNELVVPEDYDLSLDKIEYQIKPAK |
Ga0081455_1000664715 | 3300005937 | Tabebuia Heterophylla Rhizosphere | MPNVFTDWTSRAAITARIAEEQRHSVESWNELEAPEDYDLSFDKIEYQIRPAKWPWLVHII* |
Ga0075428_1003883262 | 3300006844 | Populus Rhizosphere | MSDTFTNWTSRAAVARRVAEERRRPESWNELTIPDDYDMPLDKAEYQTRPAKWPWQVYII |
Ga0075425_1001935244 | 3300006854 | Populus Rhizosphere | MESKRLEVPMANVFTDWTSRAAIAARIAEEQRAPVESWNELEAPEDYDLSFEKIEYQIRPAKWPWLVYII* |
Ga0075419_108179792 | 3300006969 | Populus Rhizosphere | MSDTFTNWTSRAAVARRVAEERRRPESWNELTIPDDYDTPLDKAEYQTRPAKWPWQVYII |
Ga0105251_100424704 | 3300009011 | Switchgrass Rhizosphere | MAKVFTDRTSRTAIDARIAEERRNPVESWNELTAAREDNDLSFDKVEYEIKPA |
Ga0105243_123187631 | 3300009148 | Miscanthus Rhizosphere | ANVFTDRTSRTAIAARIAEERQVESWNELAAPEDYDLSLDKIEYQIRPAKWPWLVYII* |
Ga0111538_106161483 | 3300009156 | Populus Rhizosphere | MANVFTDRTSRTAIAARIAEERQVESWNELAGPDDYDLSFDKIEYQIRPAKWPWLVYII* |
Ga0075423_103302424 | 3300009162 | Populus Rhizosphere | MNSKELEAPMSDTFTNWTSRAAVARRVAEERRRPESWNELTIPDDYDTPLDKAEYQTRPAKWPWQVYII* |
Ga0075423_104183751 | 3300009162 | Populus Rhizosphere | AIAARIAEEQRAPVESWNELEAPEDYDLSFEKIEYQIRPAKWPWLVYII* |
Ga0126384_107846912 | 3300010046 | Tropical Forest Soil | MLVNTFWTSRVAIAARISEEQRCPESWNELAAPEDYDLPLDKIDYQIRPAKWPWQVYII* |
Ga0126377_110087101 | 3300010362 | Tropical Forest Soil | MANLFMDWTSRVAIAARVEEERCHPVESWNELTAPEDYDLPFDKVEYQVRPAKWPWLVYII* |
Ga0134125_107343972 | 3300010371 | Terrestrial Soil | MANAFTDWTSRAAIAARVAEEQRNPVESWNELEAPEDYDLSLDKVEYQIRPAKWPWLLYII* |
Ga0134124_101296241 | 3300010397 | Terrestrial Soil | RTSRTAIAARIAEERQVESWNELSVPEDYDLSLDKIEYQIRPTKWPWLVYII* |
Ga0134127_107421782 | 3300010399 | Terrestrial Soil | WTSRVAIAARIAEERRCPESWNELTAPEDYDLPLDKVEYQIRPAKWPWQVYII* |
Ga0134123_118494341 | 3300010403 | Terrestrial Soil | TDRTSRTAIAARIAEERQVESWNELAVPEDYDLSLDKIEYQIRPTKWPWLVYII* |
Ga0137370_101784602 | 3300012285 | Vadose Zone Soil | MNSKELEAPMSDTLMNWTSRAAVARRVAEERRRPESWNELTILTIRDDDDLPLDKAEYQTRPAKWPWQVYII* |
Ga0157328_10283471 | 3300012478 | Arabidopsis Rhizosphere | RTAIAARIAEERQVESWNELAVPEDYDLSLDKIEYQIRPTKWPWLVYII* |
Ga0157346_10044092 | 3300012480 | Arabidopsis Rhizosphere | MANVFTDRTSRTAIAARIAEERQVESWNELAAPEDYDLSLDKIEYQIRPAKWPWLVYVI* |
Ga0157331_10344241 | 3300012486 | Soil | MANVFTDRTSRTAIAARIAEERQVESWNELAVPEDYDLSLDKIEYQIRP |
Ga0157349_10073071 | 3300012489 | Unplanted Soil | MNSKQLEVNMANVFADWTSRAVIAARIAEERRNPVESWNELAAPEDYDLSLDKIEYQIRPAKWPWLVYII* |
Ga0157322_10216581 | 3300012490 | Arabidopsis Rhizosphere | LDVPMANVFTDRTSRTAIAARIAEERQVESWNELAAPEDYDLSLDKIEYQIRPAKWPWLVYII* |
Ga0157323_10027642 | 3300012495 | Arabidopsis Rhizosphere | MANVFTDRTSRTAIAARIAEERQVESWNELSVPEDYDLSLDKIEYQIRPAKWPWLVYII* |
Ga0157303_101177591 | 3300012896 | Soil | MANVFTDWTSRTAIAARIAEERQVESWNELAVPEDYDLSLDKIEYQIRPAKWPWLVYII* |
Ga0157301_103235031 | 3300012911 | Soil | PMANVFTDRTSRTAIAARIAEERQVESWNELAAPEDYDLSLDKIEYQIRPAKWPWLVYII |
Ga0164303_103427931 | 3300012957 | Soil | MANVFTDRTSRTAIAARIAEERQVESWNELAAPDDYDLSFDKIEYQIRPAKWPWLVYVI* |
Ga0164303_105036111 | 3300012957 | Soil | MANVFTHRPSRTAIAARIAEERQVESWNELAVPEDYDLSLDKIEYQIRPTKWPWLVYII* |
Ga0164299_104343101 | 3300012958 | Soil | DVPMANVFTDRTSRTAIAARIAEERKVESWNELAVPEDYDLSLDKIEYQIRPTKWPWLVYII* |
Ga0164299_110639761 | 3300012958 | Soil | MANVFTDRTSRTAIAARIAEERQVESWNELAAPEDYDLSLDKIEYQIRPAKWPWLVYIS* |
Ga0164309_106843092 | 3300012984 | Soil | FWTSRVAIAARIAEERRCPESWNELTAPEDYDLPLDKVEYQIRPAKWPWQVYII* |
Ga0164307_100154495 | 3300012987 | Soil | MLGNAFWTSRVAIAARIAEERRCPESWNELTAPEDYDLPLDKVEYQIRPAKWPWQVYII* |
Ga0075303_10286552 | 3300014299 | Natural And Restored Wetlands | AAIDDRIAEEQRHTVESWNELIVPEDYDLSLEKIEYQIKPAKWPWLVHII* |
Ga0075354_10146942 | 3300014308 | Natural And Restored Wetlands | MNSEQLEAPMANAFIDWTSRAAIATRIAEEQRHPVESWNELIVPEDYDLSLEKIEYQIKPAKWPWLVHII* |
Ga0132258_101373574 | 3300015371 | Arabidopsis Rhizosphere | MANAFTDWTSRTAIAARIREERQVESWNELAAPEDYDLSLDKIEYQIRPAKWPWLVYII* |
Ga0132258_112696652 | 3300015371 | Arabidopsis Rhizosphere | MNSKQLEVPMANVFTDWTSRAVIAARIAEERWNPVESWNELAAPEDYDLSLDKIEYQIRPAKWPWLVYVI* |
Ga0132258_116879023 | 3300015371 | Arabidopsis Rhizosphere | MANAFMDWTSRAAIDARIAEEQRHPVESWNELIVPEDYDLSLEKIEYQIKPAKWPWLVHII* |
Ga0132258_117466681 | 3300015371 | Arabidopsis Rhizosphere | MNSKHWRMLVNTFWTSRVAIAARIAEERRCPESWNELTAPEDYDLPLDKIEYQIRPAKWPWQVYII* |
Ga0132258_135085353 | 3300015371 | Arabidopsis Rhizosphere | MNSKQLEVNMANVFADWTSRAVIAARIAEERRNPVESWNELAAPEDYDLSHKIEYQIRPAKWPWLVYII* |
Ga0132256_1000178582 | 3300015372 | Arabidopsis Rhizosphere | MLMANVFTNWTSRAAIAARIAEEQRNPIESWNELEAVEDYDLSLDKIEYQIRPAKWPWLVHII* |
Ga0132256_1013791162 | 3300015372 | Arabidopsis Rhizosphere | MNSKQLEVPMANVFTDWTSRAVIAARIAEERWNPVESWNELAAPEDYDLSLDKIEYQIRPAKWPWLVYII* |
Ga0132256_1023816301 | 3300015372 | Arabidopsis Rhizosphere | MNSKRLEAPMANVFTDWTSRAAIASRIAEEQRNSVESWNELEAPEDYDLSFEKIEYQIRPAKWPWLVYII* |
Ga0132257_1000721995 | 3300015373 | Arabidopsis Rhizosphere | MAKVFTDWPSRTAIDARIAEERRNPVESWNELTAAREDNDLSFDKVEYEIKPAKWPWLVHII* |
Ga0132255_1026075792 | 3300015374 | Arabidopsis Rhizosphere | MANVFTDWTSRTAIAARIAEERQVESWNELAAPDDYDLSFDKIEYQIRPAKWPWLVYII* |
Ga0132255_1032950761 | 3300015374 | Arabidopsis Rhizosphere | MAKVFADQTSRTAIDARIAEERQNPVESWNELTAAREDNDLSFDKVEYDIKPAKWPWLVHII* |
Ga0173481_101228122 | 3300019356 | Soil | MANVFTDRTSRTAIAARIAEERQVESWNELAAPEDYDLSLDKIEYQIRPAKWPWLVYII |
Ga0173482_1000000718 | 3300019361 | Soil | MAKVFTDRTSRTAIDARIAEERRNPVESWNELTAAREDNDLSSDKVEYEIKPAKWPWLVHII |
Ga0173482_100226423 | 3300019361 | Soil | MANVFTDRTSRTAIAARIAEERQVESWNELSVPEDYDLSLDKIEYQIRPTKWPWLVYII |
Ga0247795_10001101 | 3300022899 | Soil | TDRTSRTAIDARIAEERRNPVESWNELTAAREDNDLSFDKVEYEIKPAKWPWLVHII |
Ga0247798_10024601 | 3300023260 | Soil | MAKVFTDRTSRTAIDARIAEERRNPVESWNELTAAREDNDLSFDKVEYEIKPAKWPWL |
Ga0247796_100000922 | 3300023261 | Soil | MAKVFTDWTSRTAIDARIAEERRNPVESWNELTAAREDNDLSFDKVEYEIKPAKWPWLVHII |
Ga0247796_10021983 | 3300023261 | Soil | MANVFTDRTSRTAIAARIAEERQVESWNELAVPEDYDLSLDKIEYQIRPTKWPWLVYII |
Ga0210132_10107282 | 3300025538 | Natural And Restored Wetlands | MASAFMDWTSRAAIDARIAEEQRHPVESWNELIVPEDYDLSLEKIEYQIKPAKWPWLVHI |
Ga0207642_103960602 | 3300025899 | Miscanthus Rhizosphere | MANVFTDRTSRTAIAARIAEERQVESWNELAAPEDYDLSLDKIEYQIRP |
Ga0207645_105803922 | 3300025907 | Miscanthus Rhizosphere | KRLDVPMANVFTDRTSRTAIAARIAEERQVESWNELAVPEDYDLSLDKIEYQIRPTKWPWLVYII |
Ga0207707_102639243 | 3300025912 | Corn Rhizosphere | MNSKHWRMLVNTFWTSRVAIAARIAEERRCPESWNELTAPEDYDLPLDKVEYQIRPAKWPWQVYII |
Ga0207657_102453582 | 3300025919 | Corn Rhizosphere | MANVFTDRTSRTAIAARIAEERQVESWNELAAPEDYDLSLDKIEYQIRPTKWPWLVYII |
Ga0207649_109947251 | 3300025920 | Corn Rhizosphere | MANVFTDRTSRTAIAARIAEERQVESWNELAVPEDYDLSLDKIEYQIRPAKWPWLVYII |
Ga0207681_111416601 | 3300025923 | Switchgrass Rhizosphere | RTSRTAIAARIAEERQVESWNELSVPEDYDLSLDKIEYQIRPTKWPWLVYII |
Ga0207701_101962482 | 3300025930 | Corn, Switchgrass And Miscanthus Rhizosphere | MANAFMDWTSRVAIDARIAEEQRHPVESWNELVVPEDYDLSLDKIEYQIKPAKWPWLVHI |
Ga0207701_102217503 | 3300025930 | Corn, Switchgrass And Miscanthus Rhizosphere | MANAFTDWTSRLSLRVAEEQRNPVESWNELEAPEDYDLSLDKVEYQIRPAKWPWLLYII |
Ga0207701_105683712 | 3300025930 | Corn, Switchgrass And Miscanthus Rhizosphere | PMANVFTDRTSRTAIAARIAEERQVESWNELAVPEDYDLSLDKIEYQIRPAKWPWLVYII |
Ga0207686_115167221 | 3300025934 | Miscanthus Rhizosphere | PMANVFTDRTSRTAIAARIAEERQVESWNELSVPEDYDLSLDKIEYQIRPTKWPWLVYII |
Ga0207669_115477891 | 3300025937 | Miscanthus Rhizosphere | TDRTSRTAIAARIAEERQVESWNELAAPEDYDLSLDKIEYQIRPAKWPWLVYII |
Ga0207704_116259271 | 3300025938 | Miscanthus Rhizosphere | SRVAIAARIAEERRCPESWNELTAPEDYDLPLDKVEYQIRPAKWPWQVYII |
Ga0207661_104783753 | 3300025944 | Corn Rhizosphere | MANVFTDWTSRTAIAARIAEEWQVESWNELAAPDDYDLSFDKIEYQIRPAKWPWLVYII |
Ga0207651_112113551 | 3300025960 | Switchgrass Rhizosphere | MANVFTDRTSRTAIAARIAEERQVESWNELSVPEDYDLSLDKIEYQIRPAKWPWLVYII |
Ga0208658_10205392 | 3300026047 | Natural And Restored Wetlands | TRHMNSEQLEAPMANAFIDWTSRAAIATRIAEEQRHPVESWKELIVPEDYDLSLEKIEYQIKPAKWPWLVHII |
Ga0207702_103053081 | 3300026078 | Corn Rhizosphere | PMAKVFTDRTSRTAIDARIAEERRNPVESWNELTAAREDNDLSFDKVEYEIKPAKWPWLVHII |
Ga0207648_101947772 | 3300026089 | Miscanthus Rhizosphere | MANAFTDWTSRAAIAARVAEEQRNPVESWNELEAPEDYDLSFDKVEYQIRPAKWPWLLYI |
Ga0207676_124958851 | 3300026095 | Switchgrass Rhizosphere | FTYRTSRTAIAARIAEERQVESWNELAAPEDYDLSLDKIEYQIRPAKWPWLVYII |
Ga0256800_10129691 | 3300026344 | Sediment | MANIFTDWTSRAAVAARIAEEQQNPVESWNELVAPEDYDLSFDRNEYQIRPAKWPWLVHI |
Ga0256821_10034672 | 3300026452 | Sediment | MASAFMDWTSRAAIDARIAEEQQHPVGSWNELIVPEDYDLSLEKIEYQIKPAK |
Ga0256814_10435372 | 3300026464 | Sediment | MANIFTDWTSRAAVAARIAEEQQNPVESWNELVAPEDYDLSFDRIEYQIRPAKWPWLVHI |
Ga0207550_1009712 | 3300026733 | Soil | KVFTDRTSRTAIDARIAEERRNPVESWNELTAAREDNDLSFDKVEYEIKPAKWPWLVHII |
Ga0207591_1065671 | 3300026827 | Soil | TDWTSRTAIAARIAEERQVESWNELAAPDDYDLSFDKIEYQIRPAKWPWLVYII |
Ga0207490_10071311 | 3300026841 | Soil | MAKVFTHWTSRTAIDARIAEERRNPVESWNELTAAREDNDLSFDKVEYEIKPAKWPWLVHII |
Ga0207516_10048131 | 3300026905 | Soil | MAKVFTDRTSRTAIDARIAEERRNPVESWNELTAAREDNDLSFDKVEYEIKPAKW |
Ga0208761_10168432 | 3300026995 | Soil | DVRVIRTAIAARIAEERQVESWNELAAPADYDLSLDTIEYQIRPAKWPWLVYII |
Ga0208761_10268341 | 3300026995 | Soil | MANVFTDRTSRTAIAARIAEERQVESWNELAAPADYDLSLDTIEYQIRPAK |
Ga0207467_10024111 | 3300027036 | Soil | LEVPMAKVFTDRTSRTAIDARIAEERRNPVESWNELTAAREDNDLSFDKVEYEIKPAKWPWLVHII |
Ga0208637_10030292 | 3300027401 | Soil | MANVFTDRTSRTAIAARIAEERQVESWNELAAPDDYDLSFDKIEYQIRPAKWPWLVYII |
Ga0207472_1019791 | 3300027427 | Soil | MAKVFTDRTSRTAIDARIAEERRNPVESWNELTAAREDNDLSFDKVEYEIKPAKWP |
Ga0208890_10191932 | 3300027523 | Soil | MANVFTDRTSRTAIAARIAEERQVESWNELAAPADYDLSLDTIEYQIRPAKWPWLVYII |
Ga0209814_101231323 | 3300027873 | Populus Rhizosphere | MNSKELEAPMSDTFTNWTSRAAVARRVAEERRRPESWNELTIPDDYDMPLDKAEYQTRPAKWPWQVYII |
Ga0209974_100490682 | 3300027876 | Arabidopsis Thaliana Rhizosphere | MANVFTDWTSRTAIAARIAEERQVESWNELAAPDDYDLSFDKIEYQIRPAKWPWLVYII |
Ga0209974_104258651 | 3300027876 | Arabidopsis Thaliana Rhizosphere | VSNTFTDWTSRVAIAARVAEERRRPENWNELTTPEDYDLPLDKAEYQTRPAKWPWQVYII |
Ga0268266_108395382 | 3300028379 | Switchgrass Rhizosphere | MAKVFTDWTSRTAIDARIAEERRNPVESWNELTAAREDNDLSFDKVEYDIKPAKWPWLVHII |
Ga0268264_106808882 | 3300028381 | Switchgrass Rhizosphere | DRTSRTAIAARIAEERQVESWNELAVPEDYDLSLDKIEYQIRPTKWPWLVYII |
Ga0247820_111672552 | 3300028597 | Soil | VPMAKVFTDRTSRTAIDARIAEERRNPVESWNELTAAREDNDLSFDKVEYEIKPAKWPWLVHII |
Ga0307503_105796791 | 3300028802 | Soil | MRQTNSKQLEVPMANVFTDWTSRTVIAARIAEERRNPVESWNELTAAEDYDLSLDKIEYQIRPARWPWLVYII |
Ga0307305_101132462 | 3300028807 | Soil | MNSKELEAPMSDTLTNWTSRAAVARRVAEERRRPESWNELTILTIPDDYDLPLDKAEYQTRPAKWPWQVYII |
Ga0247827_108336461 | 3300028889 | Soil | CDHETPKRLEVPMAKVFTDRTSRTAIDARIAEERRNPVESWNELTAAREDNDLSFDKVEYEIKPAKWPWLVHII |
(restricted) Ga0255311_10036192 | 3300031150 | Sandy Soil | MANVFTDWTSRTAIAARIAEERQNPVESWNELAAAREDYDLSFDKIEYEMKPAKWPWLVHII |
(restricted) Ga0255311_10052666 | 3300031150 | Sandy Soil | MANVFTDWTSRTAIAARIAEERQVESWNELAAPDDYDLSFDKVEYQIRPAKWPWLVYII |
Ga0307497_102664331 | 3300031226 | Soil | MSNTFLDWTSRVAIAARIAEEQRRPECWNELTTPEDYDLPLDKAEYQIRAAKWPWQIYII |
Ga0170824_1187276363 | 3300031231 | Forest Soil | MSNTFLDWTSRVAIAARIAEEQRRPECWNELTTPEDYDLPLDKAEYQIRAAKWPWQVYII |
Ga0170824_1227369861 | 3300031231 | Forest Soil | MANVFTDWTSRAVIAARIAEERRNPVESWNELTAPEDYDLSLDKIEYQIRPARWPWLVYI |
Ga0170818_1059751273 | 3300031474 | Forest Soil | MRQMNSEQLEVPMANVFTDWTSRTVIAARIAEERRNPVESWNELTAAEDYDLSLDKIEYQIRPARWPWLVYII |
Ga0310887_103651772 | 3300031547 | Soil | MANVFTDWTSRAVIAARIAEERWNPVESWNELAAPEDYDLSLDKIEYQIRPAKWPWLVYI |
Ga0310813_110508081 | 3300031716 | Soil | MANIFTDWTSRSAIAARIAEEREHPVESWNELIAPEDYDLPFDKIEYQIKPAKWPWLVHI |
Ga0310813_117131972 | 3300031716 | Soil | WTSRSAIAARIAEEREHPVESWNELNAPEDYDLSFDKIEYQIRPARWPWLVHII |
Ga0310904_112159601 | 3300031854 | Soil | VPMANVFTDRTSRTAIAARIAEERQVESWNELAVPEDYDLSLDKIEYQIRPTKWPWLVYI |
Ga0310892_103231491 | 3300031858 | Soil | MANVFTDWTSRAVIAARIAEERRNPVESWNELAAPEDYDLSHKIEYQIRPAKWPWLVHII |
Ga0310900_108424573 | 3300031908 | Soil | VFADWTSRAVIAARIAEERRNPVESWNELAAPEDYDLSHKIEYQIRPAKWPWLVYII |
Ga0310901_101934771 | 3300031940 | Soil | MANVFTDRTSRTAIAARIAEERQVESWNELAAPEDYDLSLDKIEYQIRPA |
Ga0310906_107553632 | 3300032013 | Soil | PMANVFTDWTSRTAIAARIAEERQVESWNELAAPDDYDLSFDKIEYQIRPAKWPWLVYII |
Ga0310890_101327281 | 3300032075 | Soil | MANVFADWTSRAVIAGRIAEERRNPVESWNELAAPEDYDLSHKIEYQIRPAKWPWLVYII |
Ga0310890_103568762 | 3300032075 | Soil | MANVFTDWTSRAVIAARIAEERWNPVESWNELAAPEDYDLSLDKIEYQIRPAKWPWLVYV |
Ga0307470_107986811 | 3300032174 | Hardwood Forest Soil | MANVFADWTSRAAIASRIAEEQRNPVESWNELEAPEDYDLPFEKIEYQIRPAKWPWLVHI |
Ga0310889_100010229 | 3300032179 | Soil | DVPMANVFTDRTSRTAIAARIAEERQVESWNELAAPEDYDLSLDKIEYQIRPAKWPWLVYII |
Ga0307471_1033109871 | 3300032180 | Hardwood Forest Soil | MLVNTFWTSRVAIAARIAEERRCPESWNELTAPEGYDLPLDKVEYQIRPTRWPWQVYIIENGARIC |
Ga0307471_1037955431 | 3300032180 | Hardwood Forest Soil | MAVRHMNSKRLEALMANVFTNWSSRAAIASRIAEEQRNPVESWNELEAPEDYDLSFDKVEYQLRPAKWPWLVYII |
Ga0310812_102764651 | 3300032421 | Soil | MANVFVDWTSRAAIDARIAEEQRHPVESWNELIVPEDYDLSLDKIEYQIKPAKWPWLVHI |
Ga0335084_124263051 | 3300033004 | Soil | ANAFMDWTSRVAIDARIAEEQRHPVESWNELVVPEDYDLSLDKIEYQIKPAKWPWLVHII |
Ga0316628_1001653762 | 3300033513 | Soil | MANVFMDWTSRVAIAARIEEERRHPVESWNELTVPEDYDLPLEKVEYHIRPAKWPWLVYI |
Ga0326723_0393441_202_381 | 3300034090 | Peat Soil | MSNMFIDSESRVAIAKRVAERRRAESWNEVTIPDGYDRPLDKAEYQTRAAKWLWHLYII |
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