Metagenome / Metatranscriptome Family F035381

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F035381
Family Type	Metagenome / Metatranscriptome
Number of Sequences	172
Average Sequence Length	55 residues
Representative Sequence	METAQLIQAAASIASAMAATQYGKFGGMEASRIADIAVIAVKIARAIEVEAIKQL
Number of Associated Samples	134
Number of Associated Scaffolds	172

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	82.56 %
% of genes near scaffold ends (potentially truncated)	18.60 %
% of genes from short scaffolds (< 2000 bps)	80.81 %
Associated GOLD sequencing projects	125
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.56

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (58.140 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (19.186 % of family members)
Environment Ontology (ENVO)	Unclassified (29.070 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.581 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 57.83% β-sheet: 0.00% Coil/Unstructured: 42.17%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.56
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.56
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 172 Family Scaffolds
PF04972	BON	2.91
PF00211	Guanylate_cyc	2.91
PF00677	Lum_binding	2.33
PF02518	HATPase_c	2.33
PF00926	DHBP_synthase	2.33
PF08843	AbiEii	1.74
PF13410	GST_C_2	1.74
PF03693	ParD_antitoxin	1.16
PF12680	SnoaL_2	1.16
PF13360	PQQ_2	1.16
PF02586	SRAP	1.16
PF01027	Bax1-I	1.16
PF07676	PD40	1.16
PF00512	HisKA	1.16
PF01872	RibD_C	1.16
PF01432	Peptidase_M3	1.16
PF04185	Phosphoesterase	1.16
PF01841	Transglut_core	1.16
PF12847	Methyltransf_18	0.58
PF00106	adh_short	0.58
PF02627	CMD	0.58
PF01063	Aminotran_4	0.58
PF00873	ACR_tran	0.58
PF00583	Acetyltransf_1	0.58
PF03734	YkuD	0.58
PF13801	Metal_resist	0.58
PF00440	TetR_N	0.58
PF13459	Fer4_15	0.58
PF06945	DUF1289	0.58
PF03824	NicO	0.58
PF13226	DUF4034	0.58
PF06628	Catalase-rel	0.58
PF13180	PDZ_2	0.58
PF13545	HTH_Crp_2	0.58
PF13620	CarboxypepD_reg	0.58
PF07045	DUF1330	0.58
PF01609	DDE_Tnp_1	0.58
PF08668	HDOD	0.58
PF08327	AHSA1	0.58
PF11455	MazE-like	0.58
PF00248	Aldo_ket_red	0.58
PF00885	DMRL_synthase	0.58
PF01904	DUF72	0.58
PF00296	Bac_luciferase	0.58
PF13884	Peptidase_S74	0.58
PF02452	PemK_toxin	0.58
PF00691	OmpA	0.58
PF14329	DUF4386	0.58
PF00437	T2SSE	0.58
PF02403	Seryl_tRNA_N	0.58
PF12840	HTH_20	0.58
PF05957	DUF883	0.58
PF12276	DUF3617	0.58
PF08240	ADH_N	0.58
PF12697	Abhydrolase_6	0.58
PF03330	DPBB_1	0.58
PF07166	DUF1398	0.58
PF07690	MFS_1	0.58
PF09351	DUF1993	0.58
PF01812	5-FTHF_cyc-lig	0.58
PF13193	AMP-binding_C	0.58
PF00216	Bac_DNA_binding	0.58
PF13411	MerR_1	0.58
PF13628	DUF4142	0.58
PF00702	Hydrolase	0.58

COG ID	Name	Functional Category	% Frequency in 172 Family Scaffolds
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	2.91
COG0108	3,4-dihydroxy-2-butanone 4-phosphate synthase	Coenzyme transport and metabolism [H]	2.33
COG0307	Riboflavin synthase alpha chain	Coenzyme transport and metabolism [H]	2.33
COG2253	Predicted nucleotidyltransferase component of viral defense system	Defense mechanisms [V]	1.74
COG0115	Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase	Amino acid transport and metabolism [E]	1.16
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	1.16
COG0339	Zn-dependent oligopeptidase, M3 family	Posttranslational modification, protein turnover, chaperones [O]	1.16
COG1164	Oligoendopeptidase F	Amino acid transport and metabolism [E]	1.16
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	1.16
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	1.16
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	1.16
COG3609	Transcriptional regulator, contains Arc/MetJ-type RHH (ribbon-helix-helix) DNA-binding domain	Transcription [K]	1.16
COG0054	6,7-dimethyl-8-ribityllumazine synthase (Riboflavin synthase beta chain)	Coenzyme transport and metabolism [H]	0.58
COG0172	Seryl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.58
COG0212	5-formyltetrahydrofolate cyclo-ligase	Coenzyme transport and metabolism [H]	0.58
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	0.58
COG0753	Catalase	Inorganic ion transport and metabolism [P]	0.58
COG0776	Bacterial nucleoid DNA-binding protein IHF-alpha	Replication, recombination and repair [L]	0.58
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	0.58
COG1801	Sugar isomerase-related protein YecE, UPF0759/DUF72 family	General function prediction only [R]	0.58
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	0.58
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.58
COG2337	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	Defense mechanisms [V]	0.58
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	0.58
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.58
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.58
COG3313	Predicted Fe-S protein YdhL, DUF1289 family	General function prediction only [R]	0.58
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.58
COG4575	Membrane-anchored ribosome-binding protein ElaB, inhibits growth in stationary phase, YqjD/DUF883 family	Translation, ribosomal structure and biogenesis [J]	0.58
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.58
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.58
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	0.58
COG5562	Prophage-encoded protein YbcV, DUF1398 family	Mobilome: prophages, transposons [X]	0.58
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.58

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	58.14 %
Unclassified	root	N/A	41.86 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	58.14 %
Unclassified	root	N/A	41.86 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	58.14 %
Unclassified	root	N/A	41.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.86 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	37.79 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	5.81 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.16 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.86 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	11.05 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7.56 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.16 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.16 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.74 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	0.58 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.58 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.86 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	2.91 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	2.33 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.33 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	1.16 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.16 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.16 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.74 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.58 %
Phycisphaerae	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	0.58 %
Gammaproteobacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis	0.58 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.58 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.86 %
Steroidobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae	2.91 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2.33 %
Rhodanobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	1.16 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.16 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.16 %
unclassified Phycisphaerae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae	0.58 %
Candidatus Competibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Competibacteraceae	0.58 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.58 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.58 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.58 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.58 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.58 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.58 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.58 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.58 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.86 %
Steroidobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	2.91 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2.33 %
Rhodanobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	1.16 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.16 %
Occallatibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter	0.58 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.58 %
Candidatus Contendobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Competibacteraceae → Candidatus Contendobacter	0.58 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	0.58 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.58 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.58 %
Rhodopseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas	0.58 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.58 %
Variovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	0.58 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	0.58 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.58 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.58 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.86 %
Steroidobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	2.91 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2.33 %
Rhodanobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	1.16 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.16 %
Actinoplanes	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	0.58 %
Candidatus Contendobacter odensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Competibacteraceae → Candidatus Contendobacter → Candidatus Contendobacter odensis	0.58 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	0.58 %
Occallatibacter savannae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	0.58 %
unclassified Variovorax	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax	0.58 %
Rhodopseudomonas palustris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris	0.58 %
unclassified Mesorhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium	0.58 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	0.58 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.58 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.58 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.58 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.58 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.86 %
Steroidobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	2.91 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2.33 %
Rhodanobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	1.16 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.16 %
Mesorhizobium sp. LNHC229A00	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. LNHC229A00	0.58 %
Candidatus Contendobacter odensis Run_B_J11	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Competibacteraceae → Candidatus Contendobacter → Candidatus Contendobacter odensis → Candidatus Contendobacter odensis Run_B_J11	0.58 %
Variovorax sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp.	0.58 %
Actinoplanes	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	0.58 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	0.58 %
Occallatibacter savannae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	0.58 %
Rhodopseudomonas palustris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris	0.58 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	0.58 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.58 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.58 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.58 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.58 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.58 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001131\|JGI12631J13338_1021316	All Organisms → cellular organisms → Bacteria → Proteobacteria	691	Open in IMG/M
3300001471\|JGI12712J15308_10020051	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1762	Open in IMG/M
3300001593\|JGI12635J15846_10008180	All Organisms → cellular organisms → Bacteria → Proteobacteria	8900	Open in IMG/M
3300002245\|JGIcombinedJ26739_100344364	All Organisms → cellular organisms → Bacteria	1372	Open in IMG/M
3300002245\|JGIcombinedJ26739_100799703	All Organisms → cellular organisms → Bacteria → Proteobacteria	823	Open in IMG/M
3300002245\|JGIcombinedJ26739_101489458	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300004080\|Ga0062385_10176167	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1131	Open in IMG/M
3300004080\|Ga0062385_10400231	Not Available	820	Open in IMG/M
3300004080\|Ga0062385_10534751	Not Available	729	Open in IMG/M
3300004091\|Ga0062387_100447607	All Organisms → cellular organisms → Bacteria → Acidobacteria	886	Open in IMG/M
3300004091\|Ga0062387_100713805	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	736	Open in IMG/M
3300004092\|Ga0062389_102684307	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	663	Open in IMG/M
3300004092\|Ga0062389_103870519	Not Available	562	Open in IMG/M
3300004092\|Ga0062389_104259311	Not Available	538	Open in IMG/M
3300004152\|Ga0062386_101534279	Not Available	555	Open in IMG/M
3300005147\|Ga0066821_1013964	Not Available	616	Open in IMG/M
3300005436\|Ga0070713_100135829	All Organisms → cellular organisms → Bacteria → Proteobacteria	2173	Open in IMG/M
3300005541\|Ga0070733_10076356	All Organisms → cellular organisms → Bacteria → Acidobacteria	2116	Open in IMG/M
3300005541\|Ga0070733_10708587	All Organisms → cellular organisms → Bacteria → Acidobacteria	676	Open in IMG/M
3300005591\|Ga0070761_10000463	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	26421	Open in IMG/M
3300005602\|Ga0070762_10240830	Not Available	1121	Open in IMG/M
3300005602\|Ga0070762_11093608	Not Available	549	Open in IMG/M
3300005610\|Ga0070763_10503237	All Organisms → cellular organisms → Bacteria → Proteobacteria	693	Open in IMG/M
3300005712\|Ga0070764_10451477	Not Available	767	Open in IMG/M
3300006047\|Ga0075024_100087742	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1349	Open in IMG/M
3300006050\|Ga0075028_100144563	All Organisms → cellular organisms → Bacteria	1251	Open in IMG/M
3300006059\|Ga0075017_100161621	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	1601	Open in IMG/M
3300006102\|Ga0075015_100639091	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	626	Open in IMG/M
3300006176\|Ga0070765_100207203	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	1782	Open in IMG/M
3300006578\|Ga0074059_12101723	Not Available	764	Open in IMG/M
3300006580\|Ga0074049_11672705	Not Available	587	Open in IMG/M
3300006893\|Ga0073928_10006736	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	15315	Open in IMG/M
3300006953\|Ga0074063_14220275	All Organisms → cellular organisms → Bacteria → Proteobacteria	856	Open in IMG/M
3300007258\|Ga0099793_10512142	Not Available	597	Open in IMG/M
3300007788\|Ga0099795_10422003	Not Available	609	Open in IMG/M
3300009038\|Ga0099829_10371911	Not Available	1179	Open in IMG/M
3300009623\|Ga0116133_1193031	Not Available	545	Open in IMG/M
3300009624\|Ga0116105_1142259	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300009628\|Ga0116125_1239617	Not Available	525	Open in IMG/M
3300009633\|Ga0116129_1017052	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2618	Open in IMG/M
3300009635\|Ga0116117_1037810	All Organisms → cellular organisms → Bacteria	1193	Open in IMG/M
3300009665\|Ga0116135_1114146	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	986	Open in IMG/M
3300009709\|Ga0116227_10303260	All Organisms → cellular organisms → Bacteria	1223	Open in IMG/M
3300009709\|Ga0116227_10403027	All Organisms → cellular organisms → Bacteria → Proteobacteria	1042	Open in IMG/M
3300010159\|Ga0099796_10177473	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	853	Open in IMG/M
3300010341\|Ga0074045_10004313	All Organisms → cellular organisms → Bacteria → Proteobacteria	12613	Open in IMG/M
3300010858\|Ga0126345_1172964	All Organisms → cellular organisms → Bacteria	3012	Open in IMG/M
3300010865\|Ga0126346_1361613	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1260	Open in IMG/M
3300010877\|Ga0126356_10294897	Not Available	2196	Open in IMG/M
3300011120\|Ga0150983_11729941	Not Available	621	Open in IMG/M
3300012202\|Ga0137363_10107682	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2130	Open in IMG/M
3300012202\|Ga0137363_10177085	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1696	Open in IMG/M
3300012203\|Ga0137399_10506390	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	1013	Open in IMG/M
3300012359\|Ga0137385_11166444	Not Available	631	Open in IMG/M
3300012362\|Ga0137361_10003935	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	9752	Open in IMG/M
3300012363\|Ga0137390_11081457	All Organisms → cellular organisms → Bacteria	752	Open in IMG/M
3300012683\|Ga0137398_10439595	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. LNHC229A00	891	Open in IMG/M
3300012685\|Ga0137397_10415988	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1001	Open in IMG/M
3300012925\|Ga0137419_10046465	All Organisms → cellular organisms → Bacteria → Proteobacteria	2775	Open in IMG/M
3300012925\|Ga0137419_10119688	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	1856	Open in IMG/M
3300012925\|Ga0137419_10162089	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp.	1624	Open in IMG/M
3300012944\|Ga0137410_10579401	Not Available	925	Open in IMG/M
3300014159\|Ga0181530_10139829	Not Available	1393	Open in IMG/M
3300014167\|Ga0181528_10041690	All Organisms → cellular organisms → Bacteria	2567	Open in IMG/M
3300014167\|Ga0181528_10902881	Not Available	500	Open in IMG/M
3300014201\|Ga0181537_10000243	All Organisms → cellular organisms → Bacteria → Proteobacteria	50804	Open in IMG/M
3300014201\|Ga0181537_10415414	Not Available	923	Open in IMG/M
3300014303\|Ga0075358_1017202	All Organisms → cellular organisms → Bacteria → Proteobacteria	999	Open in IMG/M
3300014489\|Ga0182018_10331790	Not Available	822	Open in IMG/M
3300014493\|Ga0182016_10734388	Not Available	552	Open in IMG/M
3300014501\|Ga0182024_10012207	All Organisms → cellular organisms → Bacteria → Proteobacteria	17035	Open in IMG/M
3300014502\|Ga0182021_10509486	All Organisms → cellular organisms → Bacteria → Proteobacteria	1435	Open in IMG/M
3300014654\|Ga0181525_10256073	All Organisms → cellular organisms → Bacteria → Acidobacteria	955	Open in IMG/M
3300014658\|Ga0181519_11046902	Not Available	507	Open in IMG/M
3300014838\|Ga0182030_10085046	All Organisms → cellular organisms → Bacteria	4523	Open in IMG/M
3300014838\|Ga0182030_10354558	All Organisms → cellular organisms → Bacteria	1565	Open in IMG/M
3300015051\|Ga0137414_1051462	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	2204	Open in IMG/M
3300015167\|Ga0167661_1095197	Not Available	527	Open in IMG/M
3300015199\|Ga0167647_1059282	All Organisms → cellular organisms → Bacteria → Proteobacteria	1040	Open in IMG/M
3300017946\|Ga0187879_10046524	Not Available	2564	Open in IMG/M
3300017948\|Ga0187847_10079176	Not Available	1828	Open in IMG/M
3300017948\|Ga0187847_10481637	Not Available	687	Open in IMG/M
3300018009\|Ga0187884_10249647	Not Available	723	Open in IMG/M
3300018044\|Ga0187890_10823838	Not Available	525	Open in IMG/M
3300019787\|Ga0182031_1222627	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1315	Open in IMG/M
3300019890\|Ga0193728_1096845	All Organisms → cellular organisms → Bacteria	1369	Open in IMG/M
3300020021\|Ga0193726_1000515	All Organisms → cellular organisms → Bacteria → Proteobacteria	39849	Open in IMG/M
3300020140\|Ga0179590_1187102	Not Available	568	Open in IMG/M
3300020579\|Ga0210407_10069329	All Organisms → cellular organisms → Bacteria → Proteobacteria	2645	Open in IMG/M
3300020579\|Ga0210407_10390151	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1089	Open in IMG/M
3300020579\|Ga0210407_10774277	Not Available	741	Open in IMG/M
3300020580\|Ga0210403_10741588	Not Available	784	Open in IMG/M
3300020580\|Ga0210403_10753316	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	777	Open in IMG/M
3300020582\|Ga0210395_10364239	Not Available	1087	Open in IMG/M
3300020583\|Ga0210401_10219922	Not Available	1758	Open in IMG/M
3300020583\|Ga0210401_10617752	All Organisms → cellular organisms → Bacteria → Acidobacteria	945	Open in IMG/M
3300021168\|Ga0210406_10175676	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	1787	Open in IMG/M
3300021168\|Ga0210406_10302143	All Organisms → cellular organisms → Bacteria	1301	Open in IMG/M
3300021168\|Ga0210406_10481216	Not Available	984	Open in IMG/M
3300021168\|Ga0210406_10710996	Not Available	773	Open in IMG/M
3300021168\|Ga0210406_11366912	Not Available	507	Open in IMG/M
3300021170\|Ga0210400_11558290	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300021180\|Ga0210396_10151941	All Organisms → cellular organisms → Bacteria → Proteobacteria	2080	Open in IMG/M
3300021401\|Ga0210393_10125163	All Organisms → cellular organisms → Bacteria → Acidobacteria	2057	Open in IMG/M
3300021401\|Ga0210393_10139916	All Organisms → cellular organisms → Bacteria	1942	Open in IMG/M
3300021401\|Ga0210393_11297857	Not Available	584	Open in IMG/M
3300021404\|Ga0210389_10493486	All Organisms → cellular organisms → Bacteria → Proteobacteria	963	Open in IMG/M
3300021405\|Ga0210387_10921507	All Organisms → cellular organisms → Bacteria → Proteobacteria	768	Open in IMG/M
3300021406\|Ga0210386_11180811	Not Available	648	Open in IMG/M
3300021420\|Ga0210394_10013761	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	7795	Open in IMG/M
3300021478\|Ga0210402_10022904	All Organisms → cellular organisms → Bacteria → Proteobacteria	5362	Open in IMG/M
3300021479\|Ga0210410_10046540	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3776	Open in IMG/M
3300021479\|Ga0210410_10673286	Not Available	915	Open in IMG/M
3300021479\|Ga0210410_10722969	Not Available	878	Open in IMG/M
3300022726\|Ga0242654_10147101	Not Available	784	Open in IMG/M
3300024222\|Ga0247691_1031850	Not Available	807	Open in IMG/M
3300024283\|Ga0247670_1045223	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	793	Open in IMG/M
3300024288\|Ga0179589_10052783	All Organisms → cellular organisms → Bacteria → Proteobacteria	1536	Open in IMG/M
3300025463\|Ga0208193_1006775	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3877	Open in IMG/M
3300026482\|Ga0257172_1085013	Not Available	581	Open in IMG/M
3300026555\|Ga0179593_1192879	Not Available	1759	Open in IMG/M
3300027567\|Ga0209115_1000617	All Organisms → cellular organisms → Bacteria	5441	Open in IMG/M
3300027567\|Ga0209115_1051637	All Organisms → cellular organisms → Bacteria → Acidobacteria	937	Open in IMG/M
3300027590\|Ga0209116_1008155	Not Available	2102	Open in IMG/M
3300027692\|Ga0209530_1023258	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1866	Open in IMG/M
3300027692\|Ga0209530_1042590	Not Available	1338	Open in IMG/M
3300027737\|Ga0209038_10059421	All Organisms → cellular organisms → Bacteria	1145	Open in IMG/M
3300027737\|Ga0209038_10068115	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	1067	Open in IMG/M
3300027745\|Ga0209908_10130075	Not Available	648	Open in IMG/M
3300027812\|Ga0209656_10207718	Not Available	946	Open in IMG/M
3300027853\|Ga0209274_10000239	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	41980	Open in IMG/M
3300027855\|Ga0209693_10559043	Not Available	543	Open in IMG/M
3300027894\|Ga0209068_10203018	All Organisms → cellular organisms → Bacteria	1090	Open in IMG/M
3300027894\|Ga0209068_10858435	All Organisms → cellular organisms → Bacteria → Proteobacteria	536	Open in IMG/M
3300027898\|Ga0209067_10217260	All Organisms → cellular organisms → Bacteria → Proteobacteria	1032	Open in IMG/M
3300027908\|Ga0209006_10137563	All Organisms → cellular organisms → Bacteria → Proteobacteria	2149	Open in IMG/M
3300027908\|Ga0209006_10703409	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	827	Open in IMG/M
3300027915\|Ga0209069_10086629	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1500	Open in IMG/M
3300028536\|Ga0137415_10063519	All Organisms → cellular organisms → Bacteria → Proteobacteria	3557	Open in IMG/M
3300028813\|Ga0302157_10615374	All Organisms → cellular organisms → Bacteria → Proteobacteria	559	Open in IMG/M
3300029923\|Ga0311347_10449812	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	784	Open in IMG/M
3300029945\|Ga0311330_10723565	Not Available	764	Open in IMG/M
3300029953\|Ga0311343_11188105	Not Available	583	Open in IMG/M
3300030020\|Ga0311344_11320994	Not Available	535	Open in IMG/M
3300030520\|Ga0311372_11630068	All Organisms → cellular organisms → Bacteria	784	Open in IMG/M
3300030580\|Ga0311355_10801129	Not Available	865	Open in IMG/M
3300030626\|Ga0210291_11449028	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	628	Open in IMG/M
3300030743\|Ga0265461_11581755	Not Available	716	Open in IMG/M
3300030760\|Ga0265762_1070654	Not Available	732	Open in IMG/M
3300030966\|Ga0075383_10824948	Not Available	646	Open in IMG/M
3300031057\|Ga0170834_112222250	Not Available	673	Open in IMG/M
3300031231\|Ga0170824_100033091	Not Available	950	Open in IMG/M
3300031231\|Ga0170824_105178201	Not Available	635	Open in IMG/M
3300031231\|Ga0170824_120269699	All Organisms → cellular organisms → Bacteria → Proteobacteria	1267	Open in IMG/M
3300031236\|Ga0302324_101269843	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	975	Open in IMG/M
3300031247\|Ga0265340_10492666	Not Available	539	Open in IMG/M
3300031474\|Ga0170818_112686703	Not Available	764	Open in IMG/M
3300031474\|Ga0170818_114238991	Not Available	830	Open in IMG/M
3300031524\|Ga0302320_10567774	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris	1341	Open in IMG/M
3300031663\|Ga0307484_113663	Not Available	572	Open in IMG/M
3300031708\|Ga0310686_113358652	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Competibacteraceae → Candidatus Contendobacter → Candidatus Contendobacter odensis → Candidatus Contendobacter odensis Run_B_J11	1398	Open in IMG/M
3300031712\|Ga0265342_10631583	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	539	Open in IMG/M
3300031726\|Ga0302321_100697058	All Organisms → cellular organisms → Bacteria	1139	Open in IMG/M
3300031730\|Ga0307516_10988131	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300031754\|Ga0307475_10563669	Not Available	913	Open in IMG/M
3300031754\|Ga0307475_10785891	Not Available	756	Open in IMG/M
3300031902\|Ga0302322_100146914	All Organisms → cellular organisms → Bacteria → Proteobacteria	2520	Open in IMG/M
3300031962\|Ga0307479_11747666	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300032174\|Ga0307470_10037060	All Organisms → cellular organisms → Bacteria → Proteobacteria	2381	Open in IMG/M
3300034065\|Ga0334827_168946	Not Available	670	Open in IMG/M
3300034124\|Ga0370483_0158304	Not Available	763	Open in IMG/M
3300034163\|Ga0370515_0236809	Not Available	775	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.09%
Host-Associated	Host-Associated	2.91%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	73.84%
Aquatic	Environmental → Aquatic	23.26%
Plants	Host-Associated → Plants	2.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	66.86%
Freshwater	Environmental → Aquatic → Freshwater	18.02%
Peat	Environmental → Terrestrial → Peat	6.98%
Sediment	Environmental → Aquatic → Sediment	4.65%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.16%
Peat Moss	Host-Associated → Plants → Peat Moss	1.16%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.58%
Roots	Host-Associated → Plants → Roots	0.58%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	46.51%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	18.02%
Loam	Environmental → Terrestrial → Soil → Loam	13.37%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.98%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	6.98%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.65%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.16%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified	1.16%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.58%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.58%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	25.58%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.93%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	13.95%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.79%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	6.98%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.65%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	4.65%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	4.07%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.16%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified	1.16%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.58%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.58%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.58%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	19.19%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	12.21%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	8.14%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	6.98%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	4.65%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.65%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	4.07%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	4.07%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.49%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.33%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	2.33%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.91%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.91%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	2.91%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	1.74%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.74%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	1.74%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	1.16%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.16%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.16%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.16%
Host-Associated	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated	1.16%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.58%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.58%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.58%
Thawing Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost	0.58%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.58%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.58%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.58%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.58%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.58%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	0.58%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001131	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O1	Environmental	Open in IMG/M
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005147	Soil and rhizosphere microbial communities from Laval, Canada - mgLMC	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006578	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006580	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300009624	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10	Environmental	Open in IMG/M
3300009628	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_10	Environmental	Open in IMG/M
3300009633	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10	Environmental	Open in IMG/M
3300009635	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_10	Environmental	Open in IMG/M
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental	Open in IMG/M
3300009709	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fb - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010858	Boreal forest soil eukaryotic communities from Alaska, USA - C3-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010865	Boreal forest soil eukaryotic communities from Alaska, USA - C3-3 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010877	Boreal forest soil eukaryotic communities from Alaska, USA - W3-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014167	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014303	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_TuleA_D1	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300014658	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015051	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015167	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-11b, vegetated hydrological feature)	Environmental	Open in IMG/M
3300015199	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-2c, rock/snow interface)	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300019787	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (PacBio error correction)	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300020140	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024222	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK32	Environmental	Open in IMG/M
3300024283	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK11	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025463	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10 (SPAdes)	Environmental	Open in IMG/M
3300026482	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-B	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300027567	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027590	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O1 (SPAdes)	Environmental	Open in IMG/M
3300027692	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027737	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027745	Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 812P2M	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028813	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_3	Environmental	Open in IMG/M
3300029923	II_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029945	I_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029953	II_Bog_E3 coassembly	Environmental	Open in IMG/M
3300030020	II_Bog_N1 coassembly	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030626	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO410-VDE110SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030743	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assembly	Environmental	Open in IMG/M
3300030760	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030966	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FB4 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031247	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG	Host-Associated	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031663	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031712	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG	Host-Associated	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300031730	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM	Host-Associated	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300034065	Peat soil microbial communities from Stordalen Mire, Sweden - 714 S1 1-5	Environmental	Open in IMG/M
3300034124	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12631J13338_10213162	3300001131	Forest Soil	NHSRELIMETSQLIQAAASIASAMAASRYGKFGGMEESRIADIAVIAVRIARAIEAEAIRQV*
JGI12712J15308_100200512	3300001471	Forest Soil	METALLIQAASNIAGSLAATQYGKFGGMEATRITEVASIAVKIARAIEAEILKNP*
JGI12635J15846_100081808	3300001593	Forest Soil	METSQLIQAAASIASAMAASRYGKFGGMEESRIADIAVIAVRIARAIEAEAIRQV*
JGIcombinedJ26739_1003443642	3300002245	Forest Soil	METAQLIQAAASIVGTMAASQYGKFGGMDEAKIKDIAMIAVKIARAIEIAATAKP*
JGIcombinedJ26739_1007997032	3300002245	Forest Soil	METAQLIQAAASIVGAMAASQYGKFGGMDQAKITDIATIAVKIARAIETAATTP*
JGIcombinedJ26739_1014894582	3300002245	Forest Soil	METALLIQAASNIAGSLAATQYGKFGGMEASRITEVASIAVKIARAIEAEVLKQA*
Ga0062385_101761673	3300004080	Bog Forest Soil	METAQLIQAAASIVGAMAASQYGKFGGMDEAKITDIATISVKIARAIEKAANAKP*
Ga0062385_104002311	3300004080	Bog Forest Soil	METAQLIQAAASIVSAMAATQYGKFGGMEASRIADIAAIAVKIARAIEVEAIKQP*
Ga0062385_105347512	3300004080	Bog Forest Soil	METIQLIQTAASIASGMAATQYGKFGGMEASRIADIAAIAVKIAKAIESEALKQSA*
Ga0062387_1004476072	3300004091	Bog Forest Soil	GELTMEAALLIQAASNIAGAMAATQYGKFGGMEASRLTEVATIAVRIARAIEVEVLKQP*
Ga0062387_1007138052	3300004091	Bog Forest Soil	METAQLIQAAASIASAMAATQYGKFGGMEASRIADIAAISVKIARAIEVEAIKHP*
Ga0062389_1026843071	3300004092	Bog Forest Soil	METAQLIQAAASIVGAMAASQYGKFGGMDQAKITDIATIAVKIARAIETAATAKP*
Ga0062389_1038705191	3300004092	Bog Forest Soil	METSQLIQAAASIASAMAASRYGKFGGMEESRIVDIAVIAVRIARAIEAEAVRQA*
Ga0062389_1042593111	3300004092	Bog Forest Soil	METAQLIQAAASIASAMAATQYGKFGGMETSRIEDIATISVKIAKAIEAEALKKP*
Ga0062386_1015342791	3300004152	Bog Forest Soil	METAQLIQAAASIASAMAASRYGKFGGMEESRITDVAVIAVRIARAIEAEAIKQV*
Ga0066821_10139642	3300005147	Soil	MMETAELIQAAASIASAMAASQYGRFGGMEVTKIVDIAAIAVKIARAIEVEALKQA*
Ga0070713_1001358296	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	METAELIQAAASIASAMAASQYGRFGGMEVTKIVDIAAIAVKIARAIEAEALKQA*
Ga0070733_100763561	3300005541	Surface Soil	MEAALLIQAASNIAGAMAATQYGKFGGMETSRLTEVATIAVRIARAIEAEVLKQP*
Ga0070733_107085872	3300005541	Surface Soil	METALLIQAAASIAGAMAATQYGKFGGMETSRLTEVATIAVRIARAIEAEVLKQP*
Ga0070761_1000046322	3300005591	Soil	MEAALLIQAASNIAGAMAATQYGKFGGMEAHRLTEVATIAVRIARAIEAEVLKQP*
Ga0070762_102408303	3300005602	Soil	METAQLIQAAASIASAMAATQYGKFGGMETSRIEDIAAISVKIAKAIEVEALKKP*
Ga0070762_110936082	3300005602	Soil	METALLIQAAASIAGAMAATQYGKFGGMEAHRLTEVATIAVRIARAIETEVLKQP*
Ga0070763_105032372	3300005610	Soil	METALLIQAAASIAGALAATQYGKFGGMEASRLAEVAVIAVKIAKAIEVEAIKQA*
Ga0070764_104514772	3300005712	Soil	MEAALLIQAASNIAGAMAATQYGKFGGMEASRLTEVATIAVRIARAIETEVLKQP*
Ga0075024_1000877422	3300006047	Watersheds	MEIRNLIEVASNIAGGIAATQYGKFGGMEQKKIAEVAMIAVKIARAIEAEVLKTP*
Ga0075028_1001445631	3300006050	Watersheds	LAAYCGLAGIFQVRFTTKEIIMETALLIQAAASIAGAMAASQYGKFGGMEASRLTEVATIAVKIARAIEIEAMKQV*
Ga0075017_1001616213	3300006059	Watersheds	METALLIQAAASIAGAMAARQYGKFGGMEASRLTEVATIAVKIARAIEIEAIKQV*
Ga0075015_1006390911	3300006102	Watersheds	METALLIQAAASIAGAMAASQYGKFGGMEASRLTEVATIAVKIARAIEIEAIKQV*
Ga0070765_1002072032	3300006176	Soil	MDTALLIQAASNIAGSMAATQYGKFGGMEASRITEVAMIAVKIARAIEAEVLKQP*
Ga0074059_121017232	3300006578	Soil	MVTAVLIQAAASIASAMAASQYGRFGGMEVTKIVDIAAIAVKIARAIEVEAMKQA*
Ga0074049_116727051	3300006580	Soil	METAELIQAAASIASAMAASQYGRFGGMEVTKIVDIAAIAVKIARAIEVEAMKQA*
Ga0073928_1000673613	3300006893	Iron-Sulfur Acid Spring	METAELIQAAANIAGAMAATQYGKFGGMEASRITELATIAVKIARAIETEARKQP*
Ga0074063_142202751	3300006953	Soil	METAELIQAAASIASAMAASQYGRFGGMEVTKIVDIAAIAVKIARAIEVEALKQ
Ga0099793_105121422	3300007258	Vadose Zone Soil	METSELIQAAANIAGAMAATQYGKFGGMEASRITELATIAVKIARAIETEARKLP*
Ga0099795_104220033	3300007788	Vadose Zone Soil	METEQLIQAAASIVGAMAASQYGKFGGMDEAKITDIATIAVKIARAIETAASAKS*
Ga0099829_103719113	3300009038	Vadose Zone Soil	METSELIQAAANIAGAMAATQYGKFGGMEASRITELATIAVKIARAIETEARKQP*
Ga0116133_11930311	3300009623	Peatland	METDQLIQAAASIASAMAASRYGKFGGMEESRITDIAVIAVRIARAIEAEAIRQV*
Ga0116105_11422592	3300009624	Peatland	METALLIQAAASIAGAMAATQYGKFGGMEAHRLTEVAVIAVKIAKAIELEAIKQV*
Ga0116125_12396171	3300009628	Peatland	VMETDQLIQAAASIASAMAASRYGKFGGMEESRITDIAVIAVRIARAIEAEAIRQV*
Ga0116129_10170522	3300009633	Peatland	METAQLIQAAASIVGAMAASQYGKFGGMDEAKITDIATIAVKIARAIETAAGTKP*
Ga0116117_10378102	3300009635	Peatland	METAQLIQAAASIASAMAASRYGKFGGMEESRIADIAIIAVRIAKAIEAEAIKQV*
Ga0116135_11141461	3300009665	Peatland	METSELIQAAASIASVMAASRYGKFGGMEESRIVDIAVIAVRIARAIEVEATKQV*
Ga0116227_103032602	3300009709	Host-Associated	MEQAQLIQAAASIAGAMAATQYGKFGGMEVSRITDIALIAVKIAKAIETEARSQG*
Ga0116227_104030271	3300009709	Host-Associated	METSLLIQAAASIASVMAASRYGKFGGMDDEKIADIAVIAVRIARAIEAEASKQV*
Ga0099796_101774731	3300010159	Vadose Zone Soil	METEQLIQAAASIVGAMAASQYGKFGGMDQAKITDIATIAVKIARAIETAATTKP*
Ga0074045_100043134	3300010341	Bog Forest Soil	MDTSQLIQAAANIASAMAASRYSKFGGMEESKIADIAVIAVKIARAIETEALKQA*
Ga0126345_11729643	3300010858	Boreal Forest Soil	METAQLIQAAASIVGAMAASQYGKFGGMDQAKITDIATIAVKIARAIETAAATP*
Ga0126346_13616132	3300010865	Boreal Forest Soil	METAQLIQAAASIVGAMAASQYGKFGGMDQAKITDIATIAVKIARAIETAASTP*
Ga0126356_102948973	3300010877	Boreal Forest Soil	ETAQLIQAAASIATAMAASRYGKFGGMEDSRIADIAVIAVKIARAIEVEAIKNV*
Ga0150983_117299411	3300011120	Forest Soil	METAQLIQAAASIASAMAATQYGKFGGMEASRIADIAVIAVKIARAIEVEAIKQL*
Ga0137363_101076822	3300012202	Vadose Zone Soil	METSELIQAAANIAGAMAATQYGKFGGMEASRITELATTAVKIARASETEARKLP*
Ga0137363_101770851	3300012202	Vadose Zone Soil	METSELNQAAANIAGAMAATQYGKFGGMEASRITELATIAVKIARA
Ga0137399_105063902	3300012203	Vadose Zone Soil	METSELIQAAANIAGAMAATQYGKFGGMEASRITELATIAVKIARAI
Ga0137385_111664441	3300012359	Vadose Zone Soil	METSQLIQAASSIASAMAASRYGKFGGMEDERIADIAVIAVRIARAIETEAIKQV*
Ga0137361_1000393511	3300012362	Vadose Zone Soil	NSMETSELIQAAANIAGAMAATQYGKFGGMEASRITELATIAVKIARAIETEARKLP*
Ga0137390_110814573	3300012363	Vadose Zone Soil	METAELIQAAANIAGAMAATQYGKFGGMEASRITELATIAVKIARAIETEARKLP*
Ga0137398_104395951	3300012683	Vadose Zone Soil	METAELIQAAANIAGAMAATQYGKFGGMEASRITELATIAVKIAR
Ga0137397_104159882	3300012685	Vadose Zone Soil	METAQLIQAAASIASAMAATQYGKFGGMEASRVADIAVIAVRIARAIEVEAVKQL*
Ga0137419_100464654	3300012925	Vadose Zone Soil	METAELIQAAANIAGAMAATQYGKFGGMEASRVTEIATTAVKIALAIESEARKQP*
Ga0137419_101196884	3300012925	Vadose Zone Soil	IQAAASIVGAMAASQYGKFGGMDPAKITDIATIAVKIARAIETAATTKP*
Ga0137419_101620891	3300012925	Vadose Zone Soil	METEQLIQAAASIVGAMAASQYGKFGGMDQAKITDIATIAVKIARAIETAASTP*
Ga0137410_105794011	3300012944	Vadose Zone Soil	TMQTAELIQAAASIASGMAASQYGKFGGMEVSRINDIAAIAVKIARAIEAEAIKP*
Ga0181530_101398292	3300014159	Bog	METSQLIQAAASIASAMAASRYGKFGGMEESRITDIAVIAVRIARAIEAEAIRKV*
Ga0181528_100416902	3300014167	Bog	MDTSQLIQAAANIASAMAASRYSKFGGMEESKIVDIAVIAVKIARAIEAEALKQV*
Ga0181528_109028811	3300014167	Bog	METDQLIQAAASIASAMAASRYGKFGGMEESRITDIAVIAVRIARAIEAEAIRQA*
Ga0181537_1000024342	3300014201	Bog	METALLIQAAANIAGAMAATQYGKFGGMEASRLTEVATIAVKIAKAIEIEAIKQV*
Ga0181537_104154142	3300014201	Bog	METSQLIQAAAAIASAMAASRYGKFGGMEESRIVDIAVIAVRIARAIEAEAIRQV*
Ga0075358_10172022	3300014303	Natural And Restored Wetlands	METSLLIQAAASIASAMAASRYNKFGGMETEKIADIAMIAVKIARAIEAEAIKQL*
Ga0182018_103317902	3300014489	Palsa	METAQLIQAAASIVGTMAASQYGKFGGMDEAKIKDIAMIAVKIARAIETAASAKP*
Ga0182016_107343882	3300014493	Bog	METDQLIQAAASIASAMAASRYGKFGGMEEARITDIAVIAVRIARAIEVEAKRQV*
Ga0182024_1001220714	3300014501	Permafrost	METSQLIQAAASIASAMAASRYGKFGGMEESRIADIAAIAVRIARAIETEAIRQV*
Ga0182021_105094862	3300014502	Fen	METEQLIQAAASIAGAMAASQYGKFGGMEVSRINDIASISVKIARAIEVAAVTQP*
Ga0181525_102560732	3300014654	Bog	MEAALLIQAASNIAGAMAATQYGKFGGMEASRLTEVATIAVRIARAIEIEVLKQP*
Ga0181519_110469021	3300014658	Bog	METSLLIQAAASIASAMAASRYGKFGGMEESRIADIAIIAVRIAKAIEAEAIRQL*
Ga0182030_100850466	3300014838	Bog	METSQLIQAASSIASAMAASRYGKFGGMEDERIADIAVIAVRIARAIEAEAIKQA*
Ga0182030_103545582	3300014838	Bog	METAQLIQAAASIVGTMAASQYGKFGGMDEAKIKDIAMIAVKIARAIETAATAQP*
Ga0137414_10514622	3300015051	Vadose Zone Soil	METAQLIQAAASIVGAMAASQYGKFGGMDRAKITDIATIAVKIARAIETAASTP*
Ga0167661_10951972	3300015167	Glacier Forefield Soil	IQAAASIVGPMAASQYGKFGGMDPAKIADIAMIAVKIARAIEIEANKGQT*
Ga0167647_10592822	3300015199	Glacier Forefield Soil	METAQLIQAAGAIASGMAASQYGKFGGMEASRIADIASIAVKIARAIEAEAVKP*
Ga0187879_100465244	3300017946	Peatland	METDQLIQAAASIASAMAASRYGKFGGMEESRITDIAVIAVRIARAIEAEAIRQV
Ga0187847_100791762	3300017948	Peatland	MDTSQLIQAAANIASAMAASRYSKFGGMEESKIVDIAVIAVKIARAIEAEALKQV
Ga0187847_104816372	3300017948	Peatland	METALLIQAAASIAGAMAATQYGKFGGMEAHRLTEVAVIAVKIAKAIELEAIKQV
Ga0187884_102496471	3300018009	Peatland	METSELIQAAASIASVMAASRYGKFGGMEESRIVDIAVIAVRIARAIEVEATKQV
Ga0187890_108238382	3300018044	Peatland	METAQLIQAAASIASAMAASRYGKFGGMEESRIADIAIIAVRIAKAIEVEAIKQV
Ga0182031_12226273	3300019787	Bog	METAQLIQAAASIASAMAASRYGKFGGMEESRIADIAIIAVRIAKAIEAEAIKQV
Ga0193728_10968452	3300019890	Soil	METAELIQAAANIAGAMAATQYGKFGGMEASRITELATIAVKIARAIETEARKQP
Ga0193726_100051515	3300020021	Soil	METGELIQAAANIASAMAGSQYGKFGGMEPARIVDIAATAVKIVRAIEAEALKPEAVKKT
Ga0179590_11871022	3300020140	Vadose Zone Soil	METSELIQAAANIAGAMAATQYGKFGGMEASRITELATIAVKIARAIETEARKQP
Ga0210407_100693293	3300020579	Soil	METSQLIQAASSIASAMAASRYGKFGGMEDERIADIAVIAVRIARAIEAEAIKQV
Ga0210407_103901512	3300020579	Soil	METALLIQAASNIAGSMAATQYGKFGGMEASRITEVASIAVKIARAIEAEVLKQP
Ga0210407_107742772	3300020579	Soil	TLAVKFRIDSQTKGNSMETIELIQAAANIAGAMAATQYGKFGGMEASRITELATIAVKIARAIETEARKQP
Ga0210403_107415881	3300020580	Soil	METIELIQAAANIAGAMAATQYGKFGGMEASRITELATIAVKIARAIETEARKQP
Ga0210403_107533162	3300020580	Soil	METAQLIQAAASIVGAMAASQYGKFGGMDQAKITDIATIAVKIARAIETAATTP
Ga0210395_103642391	3300020582	Soil	MEAALLIQAASNIAGAMAATQYGKFGGMEASRLTEVAIIAVRIARAIETEVLKQP
Ga0210401_102199221	3300020583	Soil	METAQLIQAAASIVGAMAASQYGKFGGMDEAKITDIATIAVKIARAIETAASAKS
Ga0210401_106177521	3300020583	Soil	MEAALLIQAASNIAGAMAATQYGKFGGMEISRLTEVATIAVRIARAIEAEVLKQP
Ga0210406_101756762	3300021168	Soil	METAQLIQAAASIVGAMAASQYGKFGGMDQAKITDIATIAVKIARAIETAAAAP
Ga0210406_103021433	3300021168	Soil	METAQLIQAAASIASAMAATQYGKFGGMEASRIADIAVIAVKIARAIEVEAMKQL
Ga0210406_104812161	3300021168	Soil	METALLIQAASNIAGSLAATQYGKFGGMEATRITEVASIAVKIARAIEAEILKNP
Ga0210406_107109962	3300021168	Soil	METAQLIQAAASIVSAMAASQYGKFGGMDEAKITDIATIAVKIARAIETAASAKS
Ga0210406_113669121	3300021168	Soil	METAQLIQAAASIASAMAATQYGKFGGMEASRIADIAVIAVKIAKAIEVEAIKQV
Ga0210400_115582901	3300021170	Soil	METAQLIQAAASIATAMAASRYGKFGGMEDARIVDIAVIAVKIARAIEVEAIKSV
Ga0210396_101519411	3300021180	Soil	METAQLIQAAASIASAMAATQYGKFGGMETSRIEDIAAISVKIAKAIEAEALKKEALKKP
Ga0210393_101251632	3300021401	Soil	MEAALLIQAASNIAGAMAATQYGKFGGMETSRLTEVATIAVRIARAIEAEVLKQP
Ga0210393_101399162	3300021401	Soil	METALLIQAAANIAGSLAATQYGKFGGMEASRITEVASIAVKIARAIEAEVLKQP
Ga0210393_112978571	3300021401	Soil	METAQLIQAAASIVSAMAASQYGKFGGMDEAKITDIATIAVKIARAIEIAATAKA
Ga0210389_104934862	3300021404	Soil	METAQLIQAAASIASAMAATQYGKFGGMEASRIQDIAAISVKIAKAIEVEALKKP
Ga0210387_109215072	3300021405	Soil	METAQLIQAAASIVGAMAASQYGKFGGMDQTKITDIATIAVKIARAIETAAAAP
Ga0210386_111808111	3300021406	Soil	FQVRFTTKEIIMETALLIQAAASIAGAMAASQYGKFGGMEASRLTEVATIAVKIARAIEIEAKKQV
Ga0210394_100137613	3300021420	Soil	METALLIQAAASIAGAMAATQYGKFGGMEAHRLTEVATIAVRIARAIETEVLKQP
Ga0210402_100229047	3300021478	Soil	METALLIQAAASIAGAMAASQYGKFGGMEASRLTEVATIAVKIARAIEIEANKQV
Ga0210410_100465405	3300021479	Soil	METAELIQAAASIAGAMAATQYGKFGGMEASRITELATIAVKIARAIETEARKQP
Ga0210410_106732862	3300021479	Soil	NHRREFIMETSQLIQAASSIASAMAASRYGKFGGMEDERITDIAVIAVRIARAIEAEAIKQV
Ga0210410_107229692	3300021479	Soil	MDTALLIQAASNIAGSMAATQYGKFGGMEASRITEVAMIAVKIARAIEAEVLKQP
Ga0242654_101471012	3300022726	Soil	METIELIQAAANIAGDMAATQYGKFGGMEASRITELATIAVKIARAIETEARKQP
Ga0247691_10318501	3300024222	Soil	MMETAELIQAAASIASAMAASQYGRFGGMEVTKIVDIAAIAVKIARAIEAEALKQA
Ga0247670_10452232	3300024283	Soil	METSQLIQAASSIASAMAASRYGKFGGMEDERIADIAMIAVRIARAIEAEAMKQV
Ga0179589_100527833	3300024288	Vadose Zone Soil	METSELIQAAANIAGAMAATQYGKFGGMEASRITELATIAVKIARAIETEARKLP
Ga0208193_10067754	3300025463	Peatland	METAQLIQAAASIVGAMAASQYGKFGGMDEAKITDIATIAVKIARAIETAAGTKP
Ga0257172_10850132	3300026482	Soil	METAELIQAAANIAGAMAATQYGKFGGMETSKITEIATTAVKIARAIETEARKQP
Ga0179593_11928792	3300026555	Vadose Zone Soil	METAQLIQAAASIASAMAATQYGKFGGMEASRVADIAVIAVRIARAIEVEAVRQL
Ga0209115_10006173	3300027567	Forest Soil	MEAALLIQAASNIAGAMAATQYGKFGGMEASRLTEVATIAVRIARAIETEVLKQP
Ga0209115_10516372	3300027567	Forest Soil	MEAALLIQAASNIAGAMAATQYGKFGGMEASRLTEVATIAVRIARAIEAEVLKQP
Ga0209116_10081554	3300027590	Forest Soil	METSQLIQAAASIASAMAASRYGKFGGMEESRIADIAVIAVRIARAIEAEAIRQV
Ga0209530_10232581	3300027692	Forest Soil	NHSRELIMETSQLIQAAASIASAMAASRYGKFGGMEESRIADIAVIAVRIARAIEAEAIRQV
Ga0209530_10425902	3300027692	Forest Soil	AQLIQAAASIVGAMAASQYGKFGGMDEAKITDIATIAVKIARAIETAAGTKP
Ga0209038_100594211	3300027737	Bog Forest Soil	MEAALLIQAASNIAGAMAATQYGKFGGMEASRLTEVATIAVRIARAIEAEV
Ga0209038_100681153	3300027737	Bog Forest Soil	MEAALLIQAASNIAGAMAATQYGKFGGMEASRLTEVATIAVRIARAIEIEVLKQP
Ga0209908_101300751	3300027745	Thawing Permafrost	METAQLIQAAASIVGTMAASQYGKFGGMDEAKIKDIAMIAVKIARAIETAASAKLSLIHI
Ga0209656_102077181	3300027812	Bog Forest Soil	MDTSQLIQAAANIASAMAASRYGKFGGMEESKIVDIAVIAVKIARAIEIEALKQV
Ga0209274_1000023935	3300027853	Soil	MEAALLIQAASNIAGAMAATQYGKFGGMEAHRLTEVATIAVRIARAIEAEVLKQP
Ga0209693_105590431	3300027855	Soil	METALLIQAAASIAGALAATQYGKFGGMEASRLAEVAVIAVKIAKAIEVEAIKQA
Ga0209068_102030183	3300027894	Watersheds	MEIRNLIEVASNIAGGIAATQYGKFGGMEQKKIAEVAMIAVKIARAIEA
Ga0209068_108584352	3300027894	Watersheds	METALLIQAAASIAGAMAARQYGKFGGMEASRLTEVATIAVKIARAIEIEAMKQV
Ga0209067_102172602	3300027898	Watersheds	METSLLIQAAASIASAMAASRYGKFGGMEDARITDIAVIAVRIARAIEVEALREL
Ga0209006_101375633	3300027908	Forest Soil	METALLIQAASNIAGSLAATQYGKFGGMEASRIAEVASIAVKIARAIEAEILKQP
Ga0209006_107034092	3300027908	Forest Soil	METALLIQAASNIAGSLAATQYGKFGGMEASRITEVASIAVKIARAIEAEVLKQA
Ga0209069_100866292	3300027915	Watersheds	MEIRNLIEVASNIAGGIAATQYGKFGGMEQKKIAEVAMIAVKIARAIEAEVLKTP
Ga0137415_100635193	3300028536	Vadose Zone Soil	METEQLIQAAASIVGAMAASQYGKFGGMDQAKITDIATIAVKIARAIETAATTKP
Ga0302157_106153741	3300028813	Bog	AQLIQAAASIASAMAASRYGKFGGMEESRIADIAIIAVRIAKAIEAEAIKQV
Ga0311347_104498123	3300029923	Fen	MEIAQLIQAASSIASAMAATQYGKFGGMEAQRIADIASISVKIARAIEAEAIKKV
Ga0311330_107235651	3300029945	Bog	METSQLIQAAASIASAMAASRYGKFGGMEDSRIVDIAVIAVRIARAIETEAMRQV
Ga0311343_111881051	3300029953	Bog	METAQLIQAAASIASAMAASRYGKFGGMEESRIVDIAVIAVRIARAIEAEAIKQV
Ga0311344_113209942	3300030020	Bog	METAQLIQAAASIASAMAASRYGKFGGMEESRITDIAVIAVRIARAIEAEAIRQV
Ga0311372_116300682	3300030520	Palsa	METAQLIQAAASIVSAMAASQYGKFGGMPDAKITDIAMIAVKIARAIETAATTAP
Ga0311355_108011292	3300030580	Palsa	METSQLIQAAASIASAMAASRYGKFGGMEDSRITDIAAIAVKIARAIEAEAIKKL
Ga0210291_114490282	3300030626	Soil	MAVHQRGNLTMDTEQLIQAAANIVGAMAATQYGKFGGMEASRITEVATIAVKIARAIETEARKQP
Ga0265461_115817552	3300030743	Soil	MEAALLIQAASNIAGAMAATQYGKFGGMEAYRLTEVATIAVRIARAIEAEVLKQP
Ga0265762_10706542	3300030760	Soil	MEAALLIQAALNIAGAMAATQYGKFGGMEASRLTEVATIAVRIARAIEAEVLKQP
Ga0075383_108249482	3300030966	Soil	METAELIQAAASIASAMAASQYGRFGGMEVTKIVDIAAIAVKIARAIEVEALKQA
Ga0170834_1122222502	3300031057	Forest Soil	MMETAELIQAAASIASAMAASQYGRFGGMEVTKIVDIAAIAVKIARAIEVEAMKQA
Ga0170824_1000330912	3300031231	Forest Soil	METALLIQAASNIASAMAASQYGKFGGMEVSRINDIAAIAVKIAKAIEAEAIKP
Ga0170824_1051782011	3300031231	Forest Soil	METNQLIQAAASIASAMAGSQYGKFGGMEPARIVDIAVTAVKIVRAIEAEAVKPEAVKKT
Ga0170824_1202696992	3300031231	Forest Soil	MMETAELIQAAASIASAMAASQYGRFGGMEVTKIVDIAAIAVKIARAIEVEALKQA
Ga0302324_1012698432	3300031236	Palsa	METSLLIQAAASIASAMAASRYGKFGGMEDSRITDIAAIAVKIARAIETEAIKRV
Ga0265340_104926661	3300031247	Rhizosphere	LIQAAASIVGPMAASQYGKFGGMDPAKIADIAMIAVKIARAIEIEANKGQT
Ga0170818_1126867032	3300031474	Forest Soil	METALLIQAASNIASAMAASQYGKFGGMEVSRINDIAAIAVKIAKAIETEAIKP
Ga0170818_1142389912	3300031474	Forest Soil	MTTMRNCPTSRASIASAMAATQYGKFGGMEPSRIADIAVIAVKIAKAIEVEALKQA
Ga0302320_105677743	3300031524	Bog	METAQLIQAAASIASAMAASRYGKFGGMEESRIADIAIIAVRIAKAIEAEAIRQV
Ga0307484_1136632	3300031663	Hardwood Forest Soil	AELIQAAANIAGAMAATQYGKFGGMEASRITELATIAVKIARAIETEARKQP
Ga0310686_1133586522	3300031708	Soil	METAQLIQAAASIASAMAATQYGKFGGMETSRIEDIAAISVKIAKAIEVEALKKEALKKP
Ga0265342_106315831	3300031712	Rhizosphere	AYTSALNHKDLIMETARLIQAAASIVGPMAASQYGKFGGMDPAKIADIAMIAVKIARAIEIEANKGQP
Ga0302321_1006970581	3300031726	Fen	MEIAQLIQAASSIASAMAATQYGKFGGMEAQRIADIASISVKIA
Ga0307516_109881312	3300031730	Ectomycorrhiza	ASSIASAMAASRYGKFGGMEDERIADIAVIAVRIARAIETEAIKQV
Ga0307475_105636691	3300031754	Hardwood Forest Soil	METADLIQAAANIAGAMAATQYGKFGGMEASRITELATIAVKIARAIETEARKQP
Ga0307475_107858913	3300031754	Hardwood Forest Soil	NSGSIHKRIGNSMETAELIQAAANIAGAMAATQYGKFGGMEASRITELATIAVKIARAIETEARKQP
Ga0302322_1001469143	3300031902	Fen	MEIAQLIQAASSIASAMAATQYGKFGGMEAQRIADIASISVKIARAIEAEAIKK
Ga0307479_117476661	3300031962	Hardwood Forest Soil	PLRQTWQPIAGRRHYQVRFTTKEIIMETALLIQAAASIAGAMAASQYGKFGGMEASRLTEVATIAVKIARAIEIEANKQV
Ga0307470_100370604	3300032174	Hardwood Forest Soil	METAQLIQAAASIVGAMAASQYGKFGGMDETKITDIATIAVKIARAIETAASTKP
Ga0334827_168946_484_651	3300034065	Soil	METDQLIQAAASIASAMAASRYGKFGGMEESRITDIAVIAVRIARAIEAEAIRQA
Ga0370483_0158304_330_500	3300034124	Untreated Peat Soil	MMETAQLIQAAASIVGTMAASQYGKFGGMDEAKIKDIAMIAVKIARAIEIAATAKS
Ga0370515_0236809_163_336	3300034163	Untreated Peat Soil	MIMETAQLIQAAASIVSAMAASQYGKFGGMDEAKITDIATIAVKIARAIETAATAKS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F035381

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences