Metagenome / Metatranscriptome Family F035391

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F035391
Family Type	Metagenome / Metatranscriptome
Number of Sequences	172
Average Sequence Length	61 residues
Representative Sequence	MGALPPHFFVWLLYMHVSGQATPIAGFKTEAMCVQIRDGMTAKANSTVKFKCDKFAIER
Number of Associated Samples	117
Number of Associated Scaffolds	172

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	73.37 %
% of genes near scaffold ends (potentially truncated)	30.23 %
% of genes from short scaffolds (< 2000 bps)	83.72 %
Associated GOLD sequencing projects	108
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.62

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (68.605 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (23.837 % of family members)
Environment Ontology (ENVO)	Unclassified (33.721 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.256 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 19.54% β-sheet: 29.89% Coil/Unstructured: 50.57%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.62
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.62
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 172 Family Scaffolds
PF04191	PEMT	1.16
PF13460	NAD_binding_10	1.16
PF00076	RRM_1	1.16
PF00239	Resolvase	1.16
PF02824	TGS	1.16
PF00498	FHA	1.16
PF00082	Peptidase_S8	1.16
PF13676	TIR_2	1.16
PF12833	HTH_18	1.16
PF01152	Bac_globin	0.58
PF02567	PhzC-PhzF	0.58
PF01979	Amidohydro_1	0.58
PF13489	Methyltransf_23	0.58
PF01112	Asparaginase_2	0.58
PF00078	RVT_1	0.58
PF07859	Abhydrolase_3	0.58
PF06983	3-dmu-9_3-mt	0.58
PF06966	DUF1295	0.58
PF04087	DUF389	0.58
PF07908	Obsolete Pfam Family	0.58
PF00589	Phage_integrase	0.58
PF08031	BBE	0.58
PF00144	Beta-lactamase	0.58
PF10503	Esterase_PHB	0.58
PF07746	LigA	0.58
PF07589	PEP-CTERM	0.58
PF14534	DUF4440	0.58
PF01799	Fer2_2	0.58
PF13936	HTH_38	0.58
PF13380	CoA_binding_2	0.58
PF13649	Methyltransf_25	0.58
PF12840	HTH_20	0.58
PF05345	He_PIG	0.58
PF02738	MoCoBD_1	0.58
PF02012	BNR	0.58
PF12697	Abhydrolase_6	0.58
PF01244	Peptidase_M19	0.58
PF00561	Abhydrolase_1	0.58

COG ID	Name	Functional Category	% Frequency in 172 Family Scaffolds
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	1.16
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	1.16
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	0.58
COG0384	Predicted epimerase YddE/YHI9, PhzF superfamily	General function prediction only [R]	0.58
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	0.58
COG1446	Isoaspartyl peptidase or L-asparaginase, Ntn-hydrolase superfamily	Amino acid transport and metabolism [E]	0.58
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.58
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.58
COG1808	Uncharacterized membrane protein AF0785, contains DUF389 domain	Function unknown [S]	0.58
COG2020	Protein-S-isoprenylcysteine O-methyltransferase Ste14	Posttranslational modification, protein turnover, chaperones [O]	0.58
COG2346	Truncated hemoglobin YjbI	Inorganic ion transport and metabolism [P]	0.58
COG2355	Zn-dependent dipeptidase, microsomal dipeptidase homolog	Posttranslational modification, protein turnover, chaperones [O]	0.58
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.58
COG2764	Zn-dependent glyoxalase, PhnB family	Energy production and conversion [C]	0.58
COG3752	Steroid 5-alpha reductase family enzyme	General function prediction only [R]	0.58
COG3865	Glyoxalase superfamily enzyme, possible 3-demethylubiquinone-9 3-methyltransferase	General function prediction only [R]	0.58

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.60 %
All Organisms	root	All Organisms	31.40 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.60 %
cellular organisms	root	All Organisms → cellular organisms	31.40 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.60 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	30.81 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.60 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	14.53 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.33 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.16 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.58 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.60 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	9.88 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2.33 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.16 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.58 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.58 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.58 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.58 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.58 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.60 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	4.07 %
Methylococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales	1.16 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	1.16 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.58 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.58 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.58 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.58 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.58 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.58 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.58 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.58 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.60 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	4.07 %
Steroidobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae	1.16 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	1.16 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	0.58 %
Betaproteobacteria bacterium SCGC AG-212-J23	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SCGC AG-212-J23	0.58 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.58 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.58 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.58 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.58 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.58 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.58 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.60 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	4.07 %
unclassified Steroidobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae	1.16 %
Methylobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylobacter	1.16 %
Desulfocapsaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfocapsaceae	0.58 %
Kribbellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae	0.58 %
Betaproteobacteria bacterium SCGC AG-212-J23	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SCGC AG-212-J23	0.58 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.58 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.58 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.58 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.58 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.58 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.60 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	4.07 %
Steroidobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	1.16 %
Methylobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylobacter	1.16 %
Kribbella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	0.58 %
Desulfosediminicola	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfocapsaceae → Desulfosediminicola	0.58 %
Betaproteobacteria bacterium SCGC AG-212-J23	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SCGC AG-212-J23	0.58 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.58 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.58 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.58 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.58 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.58 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.58 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_17196563	All Organisms → cellular organisms → Bacteria	2256	Open in IMG/M
3300001867\|JGI12627J18819_10078996	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1366	Open in IMG/M
3300001867\|JGI12627J18819_10112356	All Organisms → cellular organisms → Bacteria	1122	Open in IMG/M
3300001867\|JGI12627J18819_10328229	Not Available	618	Open in IMG/M
3300004479\|Ga0062595_100686422	Not Available	819	Open in IMG/M
3300004479\|Ga0062595_101444603	Not Available	630	Open in IMG/M
3300004633\|Ga0066395_10078393	All Organisms → cellular organisms → Bacteria	1541	Open in IMG/M
3300004633\|Ga0066395_10094213	Not Available	1430	Open in IMG/M
3300005332\|Ga0066388_101310650	Not Available	1249	Open in IMG/M
3300005332\|Ga0066388_101450416	Not Available	1196	Open in IMG/M
3300005332\|Ga0066388_102690523	Not Available	907	Open in IMG/M
3300005332\|Ga0066388_108025452	Not Available	528	Open in IMG/M
3300005363\|Ga0008090_10160903	Not Available	1610	Open in IMG/M
3300005434\|Ga0070709_10089713	Not Available	2025	Open in IMG/M
3300005435\|Ga0070714_101421529	Not Available	677	Open in IMG/M
3300005436\|Ga0070713_100016038	All Organisms → cellular organisms → Bacteria	5624	Open in IMG/M
3300005436\|Ga0070713_100068091	Not Available	2999	Open in IMG/M
3300005436\|Ga0070713_101211593	Not Available	731	Open in IMG/M
3300005439\|Ga0070711_100138603	All Organisms → cellular organisms → Bacteria	1821	Open in IMG/M
3300005445\|Ga0070708_101332977	Not Available	670	Open in IMG/M
3300005542\|Ga0070732_10773236	Not Available	585	Open in IMG/M
3300005614\|Ga0068856_101636777	Not Available	657	Open in IMG/M
3300005764\|Ga0066903_100612287	Not Available	1891	Open in IMG/M
3300005764\|Ga0066903_103503709	Not Available	846	Open in IMG/M
3300005764\|Ga0066903_103649508	Not Available	828	Open in IMG/M
3300005764\|Ga0066903_104484220	Not Available	745	Open in IMG/M
3300006028\|Ga0070717_12049000	Not Available	515	Open in IMG/M
3300006175\|Ga0070712_101201025	Not Available	660	Open in IMG/M
3300006237\|Ga0097621_101669533	Not Available	606	Open in IMG/M
3300006755\|Ga0079222_10984234	Not Available	722	Open in IMG/M
3300006854\|Ga0075425_100058629	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4316	Open in IMG/M
3300006854\|Ga0075425_101022825	Not Available	942	Open in IMG/M
3300006903\|Ga0075426_10067531	All Organisms → cellular organisms → Bacteria	2555	Open in IMG/M
3300006904\|Ga0075424_101168915	Not Available	819	Open in IMG/M
3300009792\|Ga0126374_10419281	Not Available	941	Open in IMG/M
3300009792\|Ga0126374_11558423	Not Available	544	Open in IMG/M
3300010043\|Ga0126380_10222219	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylobacter	1283	Open in IMG/M
3300010043\|Ga0126380_10848707	Not Available	753	Open in IMG/M
3300010043\|Ga0126380_11132006	Not Available	669	Open in IMG/M
3300010046\|Ga0126384_11173540	Not Available	707	Open in IMG/M
3300010048\|Ga0126373_10225716	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1830	Open in IMG/M
3300010048\|Ga0126373_10296317	All Organisms → cellular organisms → Bacteria	1611	Open in IMG/M
3300010048\|Ga0126373_10719469	All Organisms → cellular organisms → Bacteria	1057	Open in IMG/M
3300010048\|Ga0126373_11397796	Not Available	765	Open in IMG/M
3300010358\|Ga0126370_11753223	Not Available	599	Open in IMG/M
3300010360\|Ga0126372_11190268	Not Available	786	Open in IMG/M
3300010360\|Ga0126372_12410802	Not Available	577	Open in IMG/M
3300010361\|Ga0126378_11006809	All Organisms → cellular organisms → Bacteria	937	Open in IMG/M
3300010361\|Ga0126378_13132583	Not Available	526	Open in IMG/M
3300010366\|Ga0126379_10296878	Not Available	1619	Open in IMG/M
3300010366\|Ga0126379_11193623	Not Available	867	Open in IMG/M
3300010366\|Ga0126379_11503937	Not Available	779	Open in IMG/M
3300010376\|Ga0126381_100735069	All Organisms → cellular organisms → Bacteria	1413	Open in IMG/M
3300010376\|Ga0126381_102526625	Not Available	736	Open in IMG/M
3300010376\|Ga0126381_103069015	Not Available	662	Open in IMG/M
3300010376\|Ga0126381_103131630	Not Available	655	Open in IMG/M
3300010401\|Ga0134121_10561839	Not Available	1061	Open in IMG/M
3300011120\|Ga0150983_11856802	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	851	Open in IMG/M
3300012971\|Ga0126369_10148587	Not Available	2200	Open in IMG/M
3300012971\|Ga0126369_10561337	Not Available	1207	Open in IMG/M
3300012971\|Ga0126369_13419150	Not Available	520	Open in IMG/M
3300015371\|Ga0132258_10048742	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	9674	Open in IMG/M
3300015371\|Ga0132258_10075712	All Organisms → cellular organisms → Bacteria → Proteobacteria	7826	Open in IMG/M
3300015371\|Ga0132258_10143969	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	5708	Open in IMG/M
3300015371\|Ga0132258_10171351	All Organisms → cellular organisms → Bacteria → Proteobacteria	5234	Open in IMG/M
3300015371\|Ga0132258_11549827	Not Available	1673	Open in IMG/M
3300015371\|Ga0132258_12118274	Not Available	1413	Open in IMG/M
3300015373\|Ga0132257_100296660	Not Available	1941	Open in IMG/M
3300015373\|Ga0132257_100357737	Not Available	1766	Open in IMG/M
3300015374\|Ga0132255_103909132	Not Available	633	Open in IMG/M
3300015374\|Ga0132255_106185421	Not Available	507	Open in IMG/M
3300016294\|Ga0182041_10052442	All Organisms → cellular organisms → Archaea	2770	Open in IMG/M
3300016294\|Ga0182041_10090108	Not Available	2221	Open in IMG/M
3300016319\|Ga0182033_11310898	Not Available	651	Open in IMG/M
3300016357\|Ga0182032_11487296	Not Available	588	Open in IMG/M
3300016357\|Ga0182032_11664849	Not Available	556	Open in IMG/M
3300016371\|Ga0182034_10031503	All Organisms → cellular organisms → Bacteria	3317	Open in IMG/M
3300016404\|Ga0182037_10392907	All Organisms → cellular organisms → Bacteria	1141	Open in IMG/M
3300016422\|Ga0182039_11990175	Not Available	534	Open in IMG/M
3300016445\|Ga0182038_10489432	Not Available	1047	Open in IMG/M
3300017930\|Ga0187825_10295596	Not Available	602	Open in IMG/M
3300017936\|Ga0187821_10175987	Not Available	816	Open in IMG/M
3300017959\|Ga0187779_10109194	All Organisms → cellular organisms → Bacteria	1674	Open in IMG/M
3300017961\|Ga0187778_10002068	All Organisms → cellular organisms → Bacteria → Proteobacteria	13811	Open in IMG/M
3300017961\|Ga0187778_10057061	All Organisms → cellular organisms → Bacteria	2388	Open in IMG/M
3300017966\|Ga0187776_10821016	Not Available	669	Open in IMG/M
3300017970\|Ga0187783_10133784	All Organisms → cellular organisms → Bacteria	1828	Open in IMG/M
3300017972\|Ga0187781_10186378	All Organisms → cellular organisms → Bacteria	1462	Open in IMG/M
3300017973\|Ga0187780_10032061	All Organisms → cellular organisms → Bacteria → Proteobacteria	3705	Open in IMG/M
3300017974\|Ga0187777_10098308	All Organisms → cellular organisms → Bacteria	1920	Open in IMG/M
3300017974\|Ga0187777_10151214	Not Available	1549	Open in IMG/M
3300017974\|Ga0187777_10156319	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SCGC AG-212-J23	1523	Open in IMG/M
3300017993\|Ga0187823_10379243	Not Available	510	Open in IMG/M
3300017994\|Ga0187822_10365037	Not Available	524	Open in IMG/M
3300018060\|Ga0187765_10376416	Not Available	871	Open in IMG/M
3300021088\|Ga0210404_10109445	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	1405	Open in IMG/M
3300021560\|Ga0126371_10074021	All Organisms → cellular organisms → Bacteria	3323	Open in IMG/M
3300021560\|Ga0126371_10317876	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1687	Open in IMG/M
3300021560\|Ga0126371_10514705	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylobacter	1345	Open in IMG/M
3300021560\|Ga0126371_10670500	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	1185	Open in IMG/M
3300025928\|Ga0207700_10674629	Not Available	922	Open in IMG/M
3300027725\|Ga0209178_1131776	Not Available	853	Open in IMG/M
3300027842\|Ga0209580_10527745	Not Available	587	Open in IMG/M
3300027874\|Ga0209465_10182749	Not Available	1045	Open in IMG/M
3300031057\|Ga0170834_105234866	Not Available	503	Open in IMG/M
3300031231\|Ga0170824_122041725	Not Available	729	Open in IMG/M
3300031446\|Ga0170820_17078704	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1049	Open in IMG/M
3300031474\|Ga0170818_107624824	All Organisms → cellular organisms → Bacteria	1584	Open in IMG/M
3300031544\|Ga0318534_10215875	Not Available	1107	Open in IMG/M
3300031544\|Ga0318534_10265158	Not Available	990	Open in IMG/M
3300031544\|Ga0318534_10344203	Not Available	858	Open in IMG/M
3300031545\|Ga0318541_10092941	Not Available	1610	Open in IMG/M
3300031545\|Ga0318541_10167528	Not Available	1210	Open in IMG/M
3300031545\|Ga0318541_10621077	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	604	Open in IMG/M
3300031561\|Ga0318528_10722910	Not Available	533	Open in IMG/M
3300031573\|Ga0310915_10313145	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1110	Open in IMG/M
3300031668\|Ga0318542_10204873	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	996	Open in IMG/M
3300031668\|Ga0318542_10209402	Not Available	985	Open in IMG/M
3300031715\|Ga0307476_10097711	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2069	Open in IMG/M
3300031715\|Ga0307476_10975195	Not Available	624	Open in IMG/M
3300031719\|Ga0306917_10558494	Not Available	900	Open in IMG/M
3300031720\|Ga0307469_10536698	Not Available	1033	Open in IMG/M
3300031736\|Ga0318501_10608251	Not Available	600	Open in IMG/M
3300031744\|Ga0306918_10196868	Not Available	1517	Open in IMG/M
3300031744\|Ga0306918_10472212	Not Available	981	Open in IMG/M
3300031747\|Ga0318502_10433223	Not Available	784	Open in IMG/M
3300031754\|Ga0307475_10173128	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1721	Open in IMG/M
3300031765\|Ga0318554_10340963	Not Available	852	Open in IMG/M
3300031769\|Ga0318526_10114996	Not Available	1082	Open in IMG/M
3300031770\|Ga0318521_10456388	Not Available	765	Open in IMG/M
3300031771\|Ga0318546_10150434	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1569	Open in IMG/M
3300031781\|Ga0318547_10390604	Not Available	853	Open in IMG/M
3300031782\|Ga0318552_10535238	Not Available	598	Open in IMG/M
3300031795\|Ga0318557_10434733	Not Available	603	Open in IMG/M
3300031796\|Ga0318576_10521838	Not Available	560	Open in IMG/M
3300031820\|Ga0307473_10600417	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	760	Open in IMG/M
3300031846\|Ga0318512_10731893	Not Available	508	Open in IMG/M
3300031859\|Ga0318527_10485957	Not Available	527	Open in IMG/M
3300031890\|Ga0306925_10063737	All Organisms → cellular organisms → Bacteria	3870	Open in IMG/M
3300031896\|Ga0318551_10649716	Not Available	610	Open in IMG/M
3300031897\|Ga0318520_11064799	Not Available	512	Open in IMG/M
3300031910\|Ga0306923_11411923	Not Available	733	Open in IMG/M
3300031912\|Ga0306921_10131159	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2926	Open in IMG/M
3300031912\|Ga0306921_10402697	Not Available	1597	Open in IMG/M
3300031912\|Ga0306921_10525340	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	1374	Open in IMG/M
3300031942\|Ga0310916_10213391	Not Available	1618	Open in IMG/M
3300031946\|Ga0310910_10162220	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1717	Open in IMG/M
3300031959\|Ga0318530_10413825	Not Available	559	Open in IMG/M
3300031962\|Ga0307479_10623941	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfocapsaceae → Desulfosediminicola	1060	Open in IMG/M
3300032009\|Ga0318563_10456071	Not Available	691	Open in IMG/M
3300032010\|Ga0318569_10179002	Not Available	981	Open in IMG/M
3300032041\|Ga0318549_10434924	Not Available	591	Open in IMG/M
3300032041\|Ga0318549_10489020	Not Available	554	Open in IMG/M
3300032044\|Ga0318558_10396925	Not Available	686	Open in IMG/M
3300032055\|Ga0318575_10048297	Not Available	1942	Open in IMG/M
3300032059\|Ga0318533_10343262	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1087	Open in IMG/M
3300032063\|Ga0318504_10343519	Not Available	709	Open in IMG/M
3300032066\|Ga0318514_10637430	Not Available	567	Open in IMG/M
3300032180\|Ga0307471_100164777	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2158	Open in IMG/M
3300032205\|Ga0307472_101586233	Not Available	642	Open in IMG/M
3300032205\|Ga0307472_102089826	Not Available	569	Open in IMG/M
3300032261\|Ga0306920_102282736	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	750	Open in IMG/M
3300032770\|Ga0335085_10725974	Not Available	1102	Open in IMG/M
3300032783\|Ga0335079_12315723	Not Available	510	Open in IMG/M
3300032893\|Ga0335069_10005879	All Organisms → cellular organisms → Bacteria	17959	Open in IMG/M
3300033158\|Ga0335077_10196180	Not Available	2274	Open in IMG/M
3300033289\|Ga0310914_11131553	Not Available	684	Open in IMG/M
3300033805\|Ga0314864_0005330	All Organisms → cellular organisms → Bacteria → Acidobacteria	2362	Open in IMG/M
3300033805\|Ga0314864_0009798	Not Available	1840	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.70%
Host-Associated	Host-Associated	9.30%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.37%
Plants	Host-Associated → Plants	9.30%
Aquatic	Environmental → Aquatic	2.33%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	88.37%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.40%
Freshwater	Environmental → Aquatic → Freshwater	2.33%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.33%
Roots	Host-Associated → Plants → Roots	0.58%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	63.95%
Loam	Environmental → Terrestrial → Soil → Loam	14.53%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	5.81%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.33%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.58%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.58%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	41.86%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.60%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	9.88%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	5.81%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.33%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.33%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.58%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.58%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.58%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.58%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	23.84%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	16.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.47%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	6.40%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.40%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.23%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.23%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	5.81%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.33%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.33%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.33%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.33%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.33%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.16%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.16%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.16%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	1.16%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.58%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.58%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.58%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.58%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.58%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017993	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M
3300033805	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_50_10	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_03836790	2088090014	Soil	MATLPPHFFVWLLYMHMSGQATPIAGFKTEAMCVQIRDGMSAKANSTVKFKCDKFAIER
JGI12627J18819_100789962	3300001867	Forest Soil	MSALPPHFFVWLLYMHMSGQATPIAGFKTEAMCMQTREGMTAKANSTVKFKCDKFAIER*
JGI12627J18819_101123562	3300001867	Forest Soil	MGALPPHFFVWLLYMHMSGQATPIAGFKTQAMCVQTRDGMIAKANSTVKFRCDKFAIER*
JGI12627J18819_103282291	3300001867	Forest Soil	MGALPSHFFVWLLYMHMSGQATPIAGFKTEAMCGQIRDGMTAKANSTVKFKCDKFAIER*
Ga0062595_1006864223	3300004479	Soil	MGTLPPHFFVWLLYMHMSGHTTPIAGFKTEAMCMEIRGGMTSKANSAVMFKCDKFAIER*
Ga0062595_1014446032	3300004479	Soil	MATLPPHFFVWLLYMHMSGQATPIAGFKTEAMCVQIRDGMSAKANSTVKFKCDKFAIER*
Ga0066395_100783932	3300004633	Tropical Forest Soil	MSALAPHFFVWLLYMHMSGQAMPIAGFKTEAMCLQVRDGMTSKASSAVKYRCDKFAIER*
Ga0066395_100942132	3300004633	Tropical Forest Soil	LVLSNIRQRTGSTIMGALPPHFFVWLLYMHMSGQVTPIAGFKTEAMCVQSRDGMTAKANSTVKFKCDKFAIER*
Ga0066388_1013106502	3300005332	Tropical Forest Soil	MGTLPPHFFVWLLYMHMSGQATPIAGFKTEAMCVQIRDGMSAKSNSTVKFKCDKFAIER*
Ga0066388_1014504164	3300005332	Tropical Forest Soil	MATLPPHFFVWLLYMHMSGQATPIAGFKTEAMCVQIRDGMSAKANSTVKFKCDRFAIER*
Ga0066388_1026905232	3300005332	Tropical Forest Soil	MGALPPHFFVWLLYMHMSGQVTPIAGFKTEAMCVQSRDGMTAKANSTVKFKCDKFAIER*
Ga0066388_1080254521	3300005332	Tropical Forest Soil	MSALPPHFFVWLLYMHLSGQAMPIAGFKTEAMCVQIRDDMMAKANSTVKFRCDKFAIEK*
Ga0008090_101609033	3300005363	Tropical Rainforest Soil	FFVWLLYMHMSGQAMPIAGFKTEAMCVQIRDGMTAKASSTVTFRCDKFAIER*
Ga0070709_100897132	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MSALPPHFFVWLLYMHMSGTAVPIAGFKNEAMCVQTRDGMTAKSNSTVKYKCDKFAIER*
Ga0070714_1014215291	3300005435	Agricultural Soil	GREHVSALPPHFFVWLLYMHMSGQATPIAGFKTEAMCVQIRDGMTAKASSAVEYRCDKFAIEK*
Ga0070713_1000160383	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MGTLPPHFFVWLLYMHMSGHTTPIAGFKTEAMCMEIRDGMTSKANSAVKFKCDKFAIER*
Ga0070713_1000680911	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MSALPPHFFVWLLYMHMSGTAVPIAGFKNEAMCVQTRDGMTAKSNSTV
Ga0070713_1012115931	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MVTLPPHFFVWLLYMHMSGQATPIAGFKTEAMCVQIRDGMSAKANSTVKFKCDRFAIER*
Ga0070711_1001386033	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MGTLPPHFFVWLLYMHMSGHTTPIAGFKTEAMCMEIRDGMTSKANSAVMFKCDKFAIER*
Ga0070708_1013329772	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MGALTSHFFVWLLYMHMSGQVTPIAGFKTEAMCAQIRDGMTAKANSTVKFKCDKFAIER*
Ga0070732_107732361	3300005542	Surface Soil	MSMLPPHFFVWLLYMHMSGQATPIAGFKTEAMCVQTRDGMTAKANSAVKFRCDKFAIEK*
Ga0068856_1016367772	3300005614	Corn Rhizosphere	MGTLPPHFFVWLLYMHMSGHTTPIAGFKTEAMCMEIRDGMTSKANSAVMCKCDKFAVER*
Ga0066903_1006122874	3300005764	Tropical Forest Soil	VPEKGSTIMGTLPPHFFVWLLYMHMSGQATPIAGFKTEAMCVQIRDGMSAKSNSTVKFKCDKFAIER*
Ga0066903_1035037091	3300005764	Tropical Forest Soil	VPEKGNTIMGTLPPHFFVWLLYIHMSGQATPIAGFKTEAMCVQIRDGMTAKANSTVKFKCDKFAIER*
Ga0066903_1036495083	3300005764	Tropical Forest Soil	FVWLLYMHMSGQAMPIAGFKTEAMCLQVRDGMTSKASSAVKYRCDKFAIER*
Ga0066903_1044842203	3300005764	Tropical Forest Soil	MSALPPHFFVWLLYMHMSGTAVPIAGFKTEAMCVQTRDGMTAKSNSTVWYRCDKFAIER*
Ga0070717_120490001	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	LPPHFFVWLLYMHMSGQATPIAGFKTEAMCVQIRDGMTAKASSAVEYRCDKFAIEK*
Ga0070712_1012010251	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VSALPPHFFVWLLYMHMSGQATPIAGFKTEAMCVQIRDGMTAKASSAVEYRCDKFAIEK*
Ga0097621_1016695331	3300006237	Miscanthus Rhizosphere	MGALPPHFFVWLLYIHMSGQATPIAGFKTEAMCMEIRGGMTSKANSAVMFKCDKFAIER*
Ga0079222_109842342	3300006755	Agricultural Soil	MGALPPHFFVWLLYMHMSGQATPIAGFKTQAMCVQTRDGMIAKANSTVKFRCDKFAIE
Ga0075425_1000586295	3300006854	Populus Rhizosphere	MSALPPHFFVWLLYMHLSGTAVPIAGFKTEAMCVQTRDGMTAKSNSAVRFRCDKFAIER*
Ga0075425_1010228252	3300006854	Populus Rhizosphere	MSALPPHFFVWLLYMHMSGQATPIAGFKTEAMCVQIRHGMTAKASSAVEYRCDKFAIEK*
Ga0075426_100675315	3300006903	Populus Rhizosphere	MGALPPHFFVWRLYMHMSGHATPIAGFKTEAMCVQTRDGMSAKATSTVRFKCDKFAIER*
Ga0075424_1011689151	3300006904	Populus Rhizosphere	PHFFVWRLYMHMSGHATPIAGFKTEAMCVQTRDGMSAKANSTVRFKCDKFAIER*
Ga0126374_104192812	3300009792	Tropical Forest Soil	MGALPPHFFVWLLYMHMSGQVTPIAGFKTEAMCLQTRDGMTAKANSTVKFKCDKFAIER*
Ga0126374_115584231	3300009792	Tropical Forest Soil	MSALAPHFFVWLLYMHMSGQAMPIAGFKTEAMCVQVRDGMTSKANSAVKYRCDKFAIER*
Ga0126380_102222194	3300010043	Tropical Forest Soil	FFVWLLYMHLSGQAMPIAGFKTESMCVQIRDDMTAKANSTVKFRCDKFAIEK*
Ga0126380_108487071	3300010043	Tropical Forest Soil	VPEKGSTIMGTLPPHFFVWLLYMHMSGHATPIAGFKTEAMCVQIRDGMSAKANSTVKFKCDRFAIER*
Ga0126380_111320061	3300010043	Tropical Forest Soil	STIMGTLPPHFFVWLLYMHMSGQATPIAGFKTEAMCVQIRDGMSAKSNSTVKFKCDKFAIER*
Ga0126384_111735401	3300010046	Tropical Forest Soil	MSALPPHFFVWLLYMHLSGQAMPIAGFKTESMCLQIRDDMTAKANSTVKFRCDKFAIEK*
Ga0126373_102257161	3300010048	Tropical Forest Soil	MSALPPHFFVWLLYMHLSGQAMPIAGFKSESMCLQIRDDMTAKANSTVKFRCDKFAIEK*
Ga0126373_102963171	3300010048	Tropical Forest Soil	MIMGTLPPHFFVWLLYVHTSGQATPIAGFKTEAMCMQIRDGMTTKANSTVTFKCDKFAIER*
Ga0126373_107194691	3300010048	Tropical Forest Soil	MGALPPHFFVWLLYMHVSGQAMPIAGFKTEAMCVQIRDGMTAKANTTVEFKCDRFAIER*
Ga0126373_113977962	3300010048	Tropical Forest Soil	MIMGTLPPHFFVWLLYMHISGQATPIAGFKTEAMCMQIRDGMTTKANSTVTFNCDKFAIER*
Ga0126370_117532231	3300010358	Tropical Forest Soil	MGTLPPHFFVWLLYIHMSGQATPIAGFKTEAMCVQIRDGMTAKANSTVKFKCDKFAIER*
Ga0126372_111902682	3300010360	Tropical Forest Soil	LVLSNIRQRTGSTIMGALPPHFFVWLLYMHMSGQVTPIAGFKTEAMCVQSRDGMTAKANSTVKFRCDKFAIER*
Ga0126372_124108022	3300010360	Tropical Forest Soil	VRRVPEKGSTNMATLPPHFFVWLLYMHMSGQATPIAGFKTEAMCVQIRDGMSAKANSAVHFKCDKFAIER*
Ga0126378_110068091	3300010361	Tropical Forest Soil	MIMGTLPPHFFVWLLYMHTSGQATPIAGFKTEAMCMQIRDGMTTKANSTVTFKCDKFAIER*
Ga0126378_131325831	3300010361	Tropical Forest Soil	GTLPPHFFVWLLYMHISGQATPGAGFKTEAMCMQIRDGMTTKANSTVKFKCDKFAIER*
Ga0126379_102968782	3300010366	Tropical Forest Soil	LVLSKIRQGTGSTIMGALPPHFFVWLLYMHMSGQVTPIAGFKTEAMCVQSRDGMTAKANSTVKFKCDKFAIER*
Ga0126379_111936232	3300010366	Tropical Forest Soil	VPEKGSTIMGTLPPHFFVWLLYMHMSGQATPIAGFKTEAMCVQIRDGMSAKSNSTVKLKCDKFAIER*
Ga0126379_115039372	3300010366	Tropical Forest Soil	MSALPPHFFVWLLYMHMSGQATPIAGFKTEAMCVQTRDGMSAKANSTVKFKCDKFAIER*
Ga0126381_1007350692	3300010376	Tropical Forest Soil	MGALPPHFFVWLLYMHVSGQATPIAGFKTEAMCVQIRDGMTATANTTVTFKCDRFAIER*
Ga0126381_1025266252	3300010376	Tropical Forest Soil	MSALPPHFFVWLLYMHLSGQAMPIAGFRSESMCLQIRDDMTAKANSTVKFRCDKFAIEK*
Ga0126381_1030690152	3300010376	Tropical Forest Soil	MSALPPHFFVWLLYMHLSGQAMPIAGFKTESMCVQIRDDMTAKANSTVKFRCDKFAIEK*
Ga0126381_1031316302	3300010376	Tropical Forest Soil	MSALPPHFFVWLLYMHVSGQATPIAGFKNEAMCVQIRDGMTAKANSTVKFKCDKFAIER*
Ga0134121_105618392	3300010401	Terrestrial Soil	MGTLPPHFFVWLLYMHMSGHTTPIPGFKTEAMCMEIRDGMTSKANSAVMFKCDKFAIER*
Ga0150983_118568022	3300011120	Forest Soil	MGALPPHFFVWLLYMHMSGQATPIAGFKTEAMCVQIRDGMTAKANSTVNFKCDKFAIER*
Ga0126369_101485872	3300012971	Tropical Forest Soil	LVLSNIRHGTGSTIMGALPPHFFVWLLYMHMSGQVTPIAGFKTEAMCVQSRDGMTAKANSTVKFKCDKFAIER*
Ga0126369_105613372	3300012971	Tropical Forest Soil	VPEKGSTIMGTLPSHFFVWLLYMHMSGQATPIAGFKTEAMCVQIRDGMSAKSNSTVKFKCDKLAIER*
Ga0126369_134191501	3300012971	Tropical Forest Soil	MGALPPHFFVWLLYMHISGQAAPIAGFKTEAMCLQVRDDMTAKVNSTVK
Ga0132258_100487422	3300015371	Arabidopsis Rhizosphere	MTALAVLSNICQGTGSTIMSALPPHFFVWLLYMHMSGQVMPIAGFKTEAMCVQIRDGMTVKANSAVKFKCDKFAIER*
Ga0132258_100757126	3300015371	Arabidopsis Rhizosphere	MPEKGSTIMATLPPHFFVWLLYMHMSGQATPIAGFKTEAMCVQIRDGMSAKANSTVKFACDKFAIER*
Ga0132258_101439692	3300015371	Arabidopsis Rhizosphere	MGALPSHFFVWLLYMHMSGQATPIAGFKTEAMCAQTREGMTAKANSTVKFKCDKFAIER*
Ga0132258_101713516	3300015371	Arabidopsis Rhizosphere	MSALPPHFFVWLLYMHMSGTAVPIAGFKTEAMCVQTRDGMRAKSNSTVRYRCDKFAIER*
Ga0132258_115498272	3300015371	Arabidopsis Rhizosphere	MGALPPHFLVWLLYIHMSRQATPIAGFKTEAMCVQTRDGMTANASSAVEFKCDKFAIER*
Ga0132258_121182741	3300015371	Arabidopsis Rhizosphere	MGALPPHFFVWLLYIHMSGQATPIAGFKTEAMCMQNRDGMTAKANSTVIFKCDKFAIER*
Ga0132257_1002966601	3300015373	Arabidopsis Rhizosphere	MATLPPHFFVWLLYMHMSGQATPIAGFKTEAMCVQIRDGMSAKANSTVKFACDKFAIER*
Ga0132257_1003577372	3300015373	Arabidopsis Rhizosphere	MGALPPHFFVWLLYIHMSGQATPIAGFKTEAMCVQTRDGMTANASSAVEFKCDKFAIER*
Ga0132255_1039091321	3300015374	Arabidopsis Rhizosphere	MSAFPPHFFVWLLYMHMSGTAVPIAGFKTEAMCVQTRDGMRAKSNSTVRYRCDKFAIER*
Ga0132255_1061854212	3300015374	Arabidopsis Rhizosphere	MGALPSHFFVWLLYMHMSGQATPIAGFKTEAMCAQTREGMTAKANSTVK
Ga0182041_100524424	3300016294	Soil	MGALPPHFFVWLLYIHMSGQATPIAGFKTEAMCAQIRNEMTAKANSAVQFRCDRFAI
Ga0182041_100901083	3300016294	Soil	MGALPPHFFVWLLYKHVSGQATPIAGFKTEAMCVEIRNGMTAKANSAVKFRCDKFAIER
Ga0182033_113108981	3300016319	Soil	MGTLPPHFFVWLLYMHISGQATPIAGFKTEAMCMQIRDGMTTKANSTVKFKCDKFAIER
Ga0182032_114872961	3300016357	Soil	MATLPRHFFVWLLYMHVRGQATPIAGFKTEAMCVQIRDGMTANANSTVKFKCDRFAIER
Ga0182032_116648491	3300016357	Soil	MPTLPPHFFVWLLYMHVSGQATPIAGFKTEAMCVQIRDGMTANANSSVKFKCDKFAIER
Ga0182034_100315034	3300016371	Soil	MGALPAHFFVWLLFMHMSGEATPIAGFKTEAMCVQIRDGMTAKASSTVKFRCDKFAIER
Ga0182037_103929072	3300016404	Soil	MGALPSHFFVWLLFMHMSGQATPIAGFKTEAMCVQIRDGMTAKANSTVKFKCDKFAIE
Ga0182039_119901751	3300016422	Soil	MGALPSHFFVWLLFMHMSGQATPIAGFKTEAMCVQIRDGMTAKANSTVKFKCDKF
Ga0182038_104894322	3300016445	Soil	FGVFQYLPERGEGSNIMGALPPHFFVWLLYMHVSGQATPIAGFKTEAMCVEIRNGMTAKANSAVKFRCDKFAIER
Ga0187825_102955963	3300017930	Freshwater Sediment	VWLLYMHMSGTAVPIAGFRNEAMCVQIRDGMTAKSNSTVQYKCDKFAIER
Ga0187821_101759871	3300017936	Freshwater Sediment	MSALPPHFFVWLLYMHMSGTAVPIAGFRNEAMCVQIRDGMTAKSNSTVQYKCDKFAIER
Ga0187779_101091942	3300017959	Tropical Peatland	MGALPPHFFVWLLYMHMSGQATPIAGFKTQAMCAQIRDGMTAKANTTVKFRCDKFAIER
Ga0187778_100020687	3300017961	Tropical Peatland	MSALPAYFFVWLLYMHISGQATPIAGFKSEAMCVQIRDDMTAKANSTVKFKCEKFAIER
Ga0187778_100570612	3300017961	Tropical Peatland	MGALPPHFFVWLLYMHISGQAMPIAGFKTEAMCVQIRDDMTAKANSTVKFKCDKFAIER
Ga0187776_108210162	3300017966	Tropical Peatland	PVKGSTIMATLPPHFFVWLLYMHMSGQATPIAGFKTEAMCVQIRDDMAAKANSAVKFKCDKFPIER
Ga0187783_101337843	3300017970	Tropical Peatland	MSALPAHFFVWLLYMHMSGQATPIAGFKTEAMCVQIRDDMAAKANSAVKFKCDKFAIER
Ga0187781_101863782	3300017972	Tropical Peatland	MSALPAHFFVWLLYMHMSGQATPIAGFKTEAMCVQIRNDMAAKANSAVKFKCDKFAIER
Ga0187780_100320617	3300017973	Tropical Peatland	MGALPTHFFVWLLYMHISGQATPIAGFKTEAMCVQTRDDMTTKANSTVKFKCDKFAIER
Ga0187777_100983082	3300017974	Tropical Peatland	MGALPPHFFVWLLYMHMSGHTTPIAGFKTEAMCTEIRDGMTSKANSAVKFKCDKFAIER
Ga0187777_101512143	3300017974	Tropical Peatland	MSALPPHFFVWLLYMHMSGTAVPIAGFKNEAMCVQIRDGMTAKSSSTVKYKCDKFAIER
Ga0187777_101563193	3300017974	Tropical Peatland	MGALPPHFFVWLLYLHISGQATPIAGFKTEAMCVQIRDDMTAKANSAVKFKCDKFAIER
Ga0187823_103792432	3300017993	Freshwater Sediment	MSALPPHFFVWLLYMHMSGTAVPIAGFRNEAMCVQIRDGMTAKSNSTVKYKCDKFAIER
Ga0187822_103650371	3300017994	Freshwater Sediment	MDALPPPFFVWLFYMHMSGTAVPVAGFRNEAMCVQIRDGMTAKSNSTVQYKCDKFAIER
Ga0187765_103764162	3300018060	Tropical Peatland	MGALPPHFFVWLLYVHISGQAMPIAGFKTEAMCVQIRDDMAAKANSTVKFKCDKFAIER
Ga0210404_101094451	3300021088	Soil	LAGEGSPIMSALPPHFFVWLLYMHMSGQATPIAGFKTEAMCVQIRDGMTAKANSTVNFKCDKFAIER
Ga0126371_100740216	3300021560	Tropical Forest Soil	MSALAPHFFVWLLYMHMSGQAMPIAGFKTEAMCLQVRDGMTSKASSAVKYRCDKFAIER
Ga0126371_103178763	3300021560	Tropical Forest Soil	MGALPPHFFVWLLYMHISGQATPIAGFKTQAMCVQIRDDMIAKANSTVTFRCDKFAIER
Ga0126371_105147052	3300021560	Tropical Forest Soil	MSALPPHFFVWLLYMHLSGQAMPIAGFKSESMCLQIRDDMTAKANSTVKFRCDKFAIEK
Ga0126371_106705004	3300021560	Tropical Forest Soil	GEGSTIMSALAPHFFVWLLYMHMSGQATPIAGFKTEAMCVQTRDGMSAKANSTVKFKCDKFAIER
Ga0207700_106746291	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MATLPPHFFVWLLYMHMSGQATPIAGFKTEAMCVQIRDGMSAKANSTVKFKCDRFAIER
Ga0209178_11317761	3300027725	Agricultural Soil	MGTLPPHFFVWLLYMHMSGHTTPIAGFKTEAMCMEIRGGMTSKANSAVMFKCDKFAIER
Ga0209580_105277451	3300027842	Surface Soil	MSMLPPHFFVWLLYMHMSGQATPIAGFKTEAMCVQTRDGMTAKANSAVKFRCDKFAIEK
Ga0209465_101827491	3300027874	Tropical Forest Soil	MGALPPHFFVWLLYMHMSGQVTPIAGFKTEAMCVQSRDGMTAKANSTV
Ga0170834_1052348662	3300031057	Forest Soil	EAAAGEGSTIMGALPSHFFVWLLYMHMSGQATPIAGFKTEAMCAQIRDGMTAKATSTVKFKCDKFAIER
Ga0170824_1220417251	3300031231	Forest Soil	RSEAAAAEGSTIMGALPSHFFVWLLYMHMSGQATPIAGFKTEAMCAQIRDGMTAKATSTVKFKCDKFAIER
Ga0170820_170787042	3300031446	Forest Soil	MGALPSHFFVWLLYMRMSGQATPIAGFKTEAMCAQIRDGMTAKATSTVKFKCDKF
Ga0170818_1076248241	3300031474	Forest Soil	MGALPSHFFVWLLYMHMSGQATPIAGFKTEAMCAQIRDGMTAKATSTVKFKCDKFAIER
Ga0318534_102158751	3300031544	Soil	MGALPPHFFVWLLYMHVSGQATPIAGFKTEAMCVEIRNGMTAKANSAVKFRCDKFAIER
Ga0318534_102651581	3300031544	Soil	ASVSGVVQHLSKRGEGSTIMGALPSHFFVWLLYMHMSGQAMPIAGFKTEAMCVQIRDGMTAKASSTVKFRCDKFAIER
Ga0318534_103442031	3300031544	Soil	MGALPAHFFVWLLYMHVSGQATPIAGFKTEAMCVQIRDGMTAKANTTVTFKCDRFAIER
Ga0318541_100929412	3300031545	Soil	MGALPAHFFVWLLFMHMSGEATPIAGFKTEAMCAQIRDGMNAKSSSTVKFRCDKFAIER
Ga0318541_101675282	3300031545	Soil	MGALPSHFFVWLLYMHMSGQAMPIAGFKTEAMCVQIRDGMTAKASSTVKFRCDKFAIER
Ga0318541_106210771	3300031545	Soil	MGTLPPHFFVWLLYMHVSGQATPIAGFKTEAMCVQIRNGMIAQANSTVKFMCDKFAIER
Ga0318538_103487171	3300031546	Soil	SKPACFGVFQYLPERGEGSNIMGALPPHFFVWLLYMHVSGQATPIAGFKTEAMCVEIRNGMTAKANSAVKFRCDKFAIER
Ga0318528_107229101	3300031561	Soil	MGALPPHFFVWLLYMHVSGQATPIAGFKTEAMCVEIRNGMTEKANSAVKFRCDKFAIER
Ga0310915_103131452	3300031573	Soil	MGALPSHFFVWLLFMHMSGQATPIAGFKTEAMCVQIRDGMTAKANSTVKFKCDKFAIER
Ga0318542_102048731	3300031668	Soil	MIMGPLPPHFFVWLLYMHISGQATPIAGFKTEAMCMQIRDGMTTKASSTVTFKCDKFAIE
Ga0318542_102094021	3300031668	Soil	MIMGTLPPHFFVWLLYMHISGQATPIAGFKTEAMCMQIRDGMTTKASSTVTFKCDKFAIE
Ga0307476_100977114	3300031715	Hardwood Forest Soil	MSMLPPHFFVWLLYMHMSGQATPIAGFKTEAMCVQTRDGMTAKATSAVKFRCDKFAIEK
Ga0307476_109751951	3300031715	Hardwood Forest Soil	MSALPPHFFVWLLYMHMSGQVTPIAGFKTEAMCVQIRDGMTAKANSTAKFKCDKFAIER
Ga0306917_105584943	3300031719	Soil	RGEGSNIMGALPPHFFVWLLYMHVSGQATPIAGFKTEAMCVEIRNGMTAKANSAVKFRCDKFAIER
Ga0307469_105366983	3300031720	Hardwood Forest Soil	MSALPSHFFVWLLYMHMSGQATPIAGFKTEAMCVQIRDGMTAKANSTVKFKCDKFAIER
Ga0318501_106082511	3300031736	Soil	GEGSNIMGALPPHFFVWLLYMHVSGQATPIAGFKTEAMCVEIRNGMTAKANSAVKFRCDKFAIER
Ga0306918_101968683	3300031744	Soil	VLSTMCREGKMIMGTLPPHFFVWLLYMHISGQATPIAGFKTEAMCMQIRDGMTTKASSTVTFKCDKFAIER
Ga0306918_104722121	3300031744	Soil	MATLPPHFFVWLLYMHMSGQATPIAGFKTEAMCVQIRDGMSAKANSTVKFKCDKFAIE
Ga0318502_104332233	3300031747	Soil	RKQASVFRCFQYLPERGEGSNIMGALPPHFFVWLLYMHVSGQATPIAGFKTEAMCVEIRNGMTAKANSAVKFRCDKFAIER
Ga0307475_101731282	3300031754	Hardwood Forest Soil	MSMLPPHFFVWLLSMHMSGQATPIAGFKTEAMCVQIRDGMAAKANSTVKFKCDKFAIEK
Ga0318554_103409631	3300031765	Soil	GEGSTIMGALPSHFFVWLLYMHMSGQAMPIAGFKTEAMCVQIRDGMTAKASSTVKFRCDKFAIER
Ga0318526_101149961	3300031769	Soil	MGALPAHFFVWLLYMHVSGQATPIAGFKTEAMCVQIRDGMTAKASSTVKFRCDKFAIER
Ga0318521_104563881	3300031770	Soil	MATLPPHFFVWLLYMHMSGQATPIAGFKTEAMCVQIRDGMSAKANSTV
Ga0318546_101504342	3300031771	Soil	LLFMHMSGQATPIAGFKTEAMCVQIRDGMTAKANSTVKFKCDKFAIER
Ga0318547_103906043	3300031781	Soil	FQYLPERGEGSNIMGALPPHFFVWLLYMHVSGQATPIAGFKTEAMCVEIRNGMTAKANSAVKFRCDKFAIER
Ga0318552_105352382	3300031782	Soil	MGALPSHFFVWLLFMHMSGQATPIAGFKTEAMCVQIRDGMTAKANSTVKFKCDKFA
Ga0318557_104347331	3300031795	Soil	PACFGVFQYLPERGEGSNIMGALPPHFFVWLLYMHVSGQATPIAGFKTEAMCVEIRNGMTAKANSAVKFRCDKFAIER
Ga0318576_105218382	3300031796	Soil	IMGALPSHFFVWLLYMHMSGQAMPIAGFKTEAMCVQIRDGMTAKASSTVKFRCDKFAIER
Ga0307473_106004171	3300031820	Hardwood Forest Soil	MGHFFVWLLYMHMSGQATPIAGFKTEAMCAQIRDGMTAKANRTVKFKCDKFAIER
Ga0318512_107318931	3300031846	Soil	MGALPSHFFVWLLYMHMSGQAMPIAGFKTEAMCVQIRDGMTAKASSTVKFRCD
Ga0318527_104859571	3300031859	Soil	ARYSKRGRFPVLSSIYRRGNMIMSALPPHFFVWLLYMHMSGQAMPIAGFKTEAMCVQIRDGMTAKASSTVKFRCDKFAIER
Ga0306925_100637372	3300031890	Soil	MGALPSHFFVWLLFMHMSGQATPIAGFKTEARCVQIRDGMTAKANSTVKFKCDKFAIER
Ga0318551_106497162	3300031896	Soil	MSALPPHFFVWLLYMHMSGTAMPIAGFKTEAMCLQISADMTAKANSAVKYRCDRFAIEK
Ga0318520_110647991	3300031897	Soil	MPTLPPHFFVWLLYMHVSGQATPIAGFKTEAMCVQIRDGMTAKANSTVKFKCDKFAIE
Ga0306923_114119231	3300031910	Soil	MGALPSHFFVWLLYMHVSGQATPIAGFKTEAMCVQIRDGMTAKANTTVKFRCDRFAIER
Ga0306921_101311594	3300031912	Soil	MGALPPHFFVWLLYIHMSGQATPIAGFKTEAMCAQIRNEMTAKANSAVQFRCDRFAIER
Ga0306921_104026973	3300031912	Soil	VPEKGSTIMATLPPHFFVWLLYMHMSGQATPIAGFKTEAMCVQIRDGMSAKANSTVKFKCDKFAIER
Ga0306921_105253404	3300031912	Soil	MGALPSHFFVWLLFMHMSGQATPIAGFKTEAMCVQIRDGMTAKANSTVKFKCDK
Ga0310916_102133912	3300031942	Soil	MTIMGTLPPHFFVWLLYMHMSGQATPIAGFKTEAMCVQIRDGMTAKANSTVKFKCDKIAIER
Ga0310910_101622203	3300031946	Soil	MGALPAHFFVWLLFMHMSGQATPIAGFKTEAMCVQIRDGMTAKANSTVKFKCDKFAIER
Ga0318530_104138252	3300031959	Soil	MGTLPPHFFVWLLYMHVSGQATPIAGFKTEAMCVQIRNGMIAQANSTVKFMCDKFAIE
Ga0307479_106239414	3300031962	Hardwood Forest Soil	ASAGKGNTNMSMLPPHFFVWLLSMHMSGQATPIAGFKTEAMCVQIRDGMAAKANSTVKFKCDKFAIEK
Ga0318563_104560711	3300032009	Soil	MGALPPHFFVWLLYMHVSGQATPIAGFKTEAMCVEIRNGMTAKANSAVKFRCD
Ga0318569_101790022	3300032010	Soil	MGALPSHFFVWLLYMHVSGQATPIAGFKTEAMCVQIRDGMTAKASSTVKFRCDKFAIER
Ga0318559_101385244	3300032039	Soil	HTRKQASVFRCFQYLPERGEGSNIMGALPPHFFVWLLYMHVSGQATPIAGFKTEAMCVENRNGMTAKANSAVKFRCDKFAIER
Ga0318549_104349241	3300032041	Soil	CFQYLPERGEGSNIMGALPPHFFVWLLYMHVSGQATPIAGFKTEAMCVEIRNGMTAKANSAVKFRCDKFAIER
Ga0318549_104890201	3300032041	Soil	MCREGKMIMGTLPPHFFVWLLYMHISGQATPIAGFKTEAMCVQIRDGMTAKANTTVTFKCDRFAIER
Ga0318558_103969252	3300032044	Soil	MGALPSHFFVWLLYMHMSGQAMPIAGFKTEAMCVQIRDGMTAKANSTVKFKCDKFAIER
Ga0318575_100482971	3300032055	Soil	MGTLPPHFFVWLLYMHISGQATPIAGFKTEAMCMQIRDGMTTKASSTVTFKCDKFAIER
Ga0318533_103432622	3300032059	Soil	LPEKGSTIMGALPSHFFVWLLFMHMSGQATPIAGFKTEAMCVQIRDGMTAKANSTVKFKCDKFAIER
Ga0318504_103435191	3300032063	Soil	MGALPSHFFVWLLFMHMSGQATPIAGFKTEAMCAQIRDGMNAKSSSTVKFRCDKFAIER
Ga0318514_106374301	3300032066	Soil	MGALPPHFFVWLLYMHVSGQATPIAGFKTEAMCVQIRDGMTAKANSTVKFKCDKFAIER
Ga0307471_1001647772	3300032180	Hardwood Forest Soil	MGALPPHFFVWLLYMHMSGQATPIAGFKTQAMCVQTRDGMIAKANSTVKFRCDKFAIER
Ga0307472_1015862332	3300032205	Hardwood Forest Soil	MSALPPHFFVWLLYMHMSGQATPIAGFKTEAMCVQIRDGMTAKANSTVNFKCDKFAI
Ga0307472_1020898261	3300032205	Hardwood Forest Soil	AVRQVPEKGSTIMATLPPHFFVWLLYMHMSGQATPIAGFKTEAMCVQIRDGMSAKANSTVKFKCDKFAIER
Ga0306920_1022827362	3300032261	Soil	STAMGTLPPHFFVWLLYMHVSGQATPIAGFKTEAMCVQIRNGMIAQANSTVKFMCDKFAIER
Ga0335085_107259741	3300032770	Soil	MSALPPHFFVWLLYMHMSGTAVPIAGFKNETMCLQIRDGMAAKSNSTVKYKCDKFAIER
Ga0335079_123157232	3300032783	Soil	MSALPPHFFVWLLYMHMSGTPVPIAGFKNETMCLQIRDGMAAKSNSTVKYKCDKFAIER
Ga0335069_100058797	3300032893	Soil	MGPLPPHFFVWLLYMHMSGQATPIAGFKTEAMCVQTRDGMTAKANSAVKFRCDRFAIER
Ga0335077_101961804	3300033158	Soil	MSALPPHFFVWLLYMHMSGTAVPIAGFKNETMCLQTRDGMAAKSNSTVKYKCDKFAIER
Ga0310914_111315531	3300033289	Soil	PHFFVWLLYMHVSGQATPIAGFKTEAMCVEIRNGMTAKANSAVKFRCDKFAIER
Ga0318519_103192883	3300033290	Soil	LESKPACFGVFQYLPERGEGSNIMGALPPHFFVWLLYMHVSGQATPIAGFKTEAMCVEIRNGMTAKANSAVKFRCDKFAIER
Ga0314864_0005330_2036_2215	3300033805	Peatland	MGALPPHFFVWLLYVHISGQAMPIAGFKTEAMCVQIRDDMTAKANSAVKFKCDKFAIEK
Ga0314864_0009798_117_296	3300033805	Peatland	MGALPPHFFVWLLFMHTSGQAMPIAGFKTEAMCLQIRDDMTAKANSTVRFKCDRFAIER

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F035391

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences