Metagenome / Metatranscriptome Family F035453

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F035453
Family Type	Metagenome / Metatranscriptome
Number of Sequences	172
Average Sequence Length	78 residues
Representative Sequence	LNELLVALASFDCHRALALLSESVAEYQAEVDIRDYVWTRKALLPHAPAAKVADFAAKRRLSEAGKPTQGQNPVA
Number of Associated Samples	143
Number of Associated Scaffolds	172

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.58 %
% of genes near scaffold ends (potentially truncated)	98.26 %
% of genes from short scaffolds (< 2000 bps)	89.53 %
Associated GOLD sequencing projects	133
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (59.302 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (17.442 % of family members)
Environment Ontology (ENVO)	Unclassified (23.256 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (49.419 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 54.37% β-sheet: 0.00% Coil/Unstructured: 45.63%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 172 Family Scaffolds
PF03721	UDPG_MGDP_dh_N	81.40
PF01370	Epimerase	3.49
PF00483	NTP_transferase	2.91
PF16363	GDP_Man_Dehyd	1.74
PF02880	PGM_PMM_III	1.74
PF08241	Methyltransf_11	1.16
PF02719	Polysacc_synt_2	1.16
PF01050	MannoseP_isomer	1.16
PF13531	SBP_bac_11	0.58
PF01569	PAP2	0.58
PF13439	Glyco_transf_4	0.58
PF00536	SAM_1	0.58

COG ID	Name	Functional Category	% Frequency in 172 Family Scaffolds
COG0240	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	81.40
COG0677	UDP-N-acetyl-D-mannosaminuronate dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	81.40
COG1004	UDP-glucose 6-dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	81.40
COG1250	3-hydroxyacyl-CoA dehydrogenase	Lipid transport and metabolism [I]	81.40
COG1893	Ketopantoate reductase	Coenzyme transport and metabolism [H]	81.40
COG0451	Nucleoside-diphosphate-sugar epimerase	Cell wall/membrane/envelope biogenesis [M]	2.33
COG0702	Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains	General function prediction only [R]	2.33
COG1086	NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC	Cell wall/membrane/envelope biogenesis [M]	2.33
COG0033	Phosphoglucomutase/phosphomannomutase	Carbohydrate transport and metabolism [G]	1.74
COG1109	Phosphomannomutase	Carbohydrate transport and metabolism [G]	1.74
COG1087	UDP-glucose 4-epimerase	Cell wall/membrane/envelope biogenesis [M]	1.16
COG1088	dTDP-D-glucose 4,6-dehydratase	Cell wall/membrane/envelope biogenesis [M]	1.16
COG1089	GDP-D-mannose dehydratase	Cell wall/membrane/envelope biogenesis [M]	1.16
COG1091	dTDP-4-dehydrorhamnose reductase	Cell wall/membrane/envelope biogenesis [M]	1.16

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	59.30 %
Unclassified	root	N/A	40.70 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	59.30 %
Unclassified	root	N/A	40.70 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	59.30 %
Unclassified	root	N/A	40.70 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	54.65 %
Unclassified	root	N/A	40.70 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.16 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.70 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	39.53 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	1.16 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.70 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	28.49 %
Chlorobi	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi	1.16 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	1.74 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	0.58 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	0.58 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.70 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	28.49 %
Chlorobia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → Chlorobia	1.16 %
Steroidobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae	1.74 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	0.58 %
Chromatiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	0.58 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.70 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	28.49 %
Chlorobiales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → Chlorobia → Chlorobiales	1.16 %
Steroidobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	1.74 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	0.58 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	0.58 %
Chromatiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.70 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	28.49 %
Chlorobiaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → Chlorobia → Chlorobiales → Chlorobiaceae	1.16 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	1.74 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	0.58 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	0.58 %
Chromatiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.70 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	28.49 %
Chlorobium/Pelodictyon group	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → Chlorobia → Chlorobiales → Chlorobiaceae → Chlorobium/Pelodictyon group	1.16 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	1.74 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	0.58 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	0.58 %
Chromatiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.70 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	28.49 %
Chlorobium	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → Chlorobia → Chlorobiales → Chlorobiaceae → Chlorobium/Pelodictyon group → Chlorobium	1.16 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	1.74 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	0.58 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	0.58 %
Chromatiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.70 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	28.49 %
unclassified Chlorobium	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → Chlorobia → Chlorobiales → Chlorobiaceae → Chlorobium/Pelodictyon group → Chlorobium → unclassified Chlorobium	1.16 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	1.74 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	0.58 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	0.58 %
Chromatiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.70 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	28.49 %
Chlorobium sp.	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → Chlorobia → Chlorobiales → Chlorobiaceae → Chlorobium/Pelodictyon group → Chlorobium → unclassified Chlorobium → Chlorobium sp.	1.16 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	1.74 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	0.58 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	0.58 %
Chromatiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	0.58 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000955\|JGI1027J12803_107085202	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1028	Open in IMG/M
3300002557\|JGI25381J37097_1094097	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	504	Open in IMG/M
3300004139\|Ga0058897_11034507	All Organisms → cellular organisms → Bacteria → Proteobacteria	1014	Open in IMG/M
3300005167\|Ga0066672_10544047	Not Available	752	Open in IMG/M
3300005167\|Ga0066672_10544049	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	752	Open in IMG/M
3300005330\|Ga0070690_101295660	Not Available	584	Open in IMG/M
3300005336\|Ga0070680_101759532	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	537	Open in IMG/M
3300005347\|Ga0070668_101424603	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	632	Open in IMG/M
3300005364\|Ga0070673_101113312	Not Available	738	Open in IMG/M
3300005445\|Ga0070708_100925920	Not Available	818	Open in IMG/M
3300005455\|Ga0070663_101791046	Not Available	550	Open in IMG/M
3300005537\|Ga0070730_10058015	All Organisms → cellular organisms → Bacteria → Proteobacteria	2768	Open in IMG/M
3300005537\|Ga0070730_10955423	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	536	Open in IMG/M
3300005538\|Ga0070731_10033862	All Organisms → cellular organisms → Bacteria → Proteobacteria	3448	Open in IMG/M
3300005538\|Ga0070731_10535999	Not Available	779	Open in IMG/M
3300005538\|Ga0070731_11009616	Not Available	551	Open in IMG/M
3300005540\|Ga0066697_10452044	Not Available	739	Open in IMG/M
3300005541\|Ga0070733_10004350	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	9500	Open in IMG/M
3300005554\|Ga0066661_10246671	All Organisms → cellular organisms → Bacteria	1105	Open in IMG/M
3300005554\|Ga0066661_10501744	Not Available	733	Open in IMG/M
3300005560\|Ga0066670_10377205	Not Available	866	Open in IMG/M
3300005560\|Ga0066670_10403132	Not Available	838	Open in IMG/M
3300005560\|Ga0066670_10819154	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	564	Open in IMG/M
3300005561\|Ga0066699_11178139	All Organisms → cellular organisms → Bacteria → Proteobacteria	526	Open in IMG/M
3300005568\|Ga0066703_10124762	All Organisms → cellular organisms → Bacteria → Proteobacteria	1534	Open in IMG/M
3300005569\|Ga0066705_10073513	All Organisms → cellular organisms → Bacteria → Proteobacteria	1978	Open in IMG/M
3300005575\|Ga0066702_10019380	All Organisms → cellular organisms → Bacteria → Proteobacteria	3283	Open in IMG/M
3300005576\|Ga0066708_10558901	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	736	Open in IMG/M
3300005577\|Ga0068857_102235031	Not Available	537	Open in IMG/M
3300005586\|Ga0066691_10917300	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	515	Open in IMG/M
3300005764\|Ga0066903_101583346	All Organisms → cellular organisms → Bacteria → Proteobacteria	1241	Open in IMG/M
3300005843\|Ga0068860_102171836	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300005843\|Ga0068860_102396165	All Organisms → cellular organisms → Bacteria → Proteobacteria	548	Open in IMG/M
3300005844\|Ga0068862_100013139	All Organisms → cellular organisms → Bacteria → Proteobacteria	6849	Open in IMG/M
3300005921\|Ga0070766_11094485	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	550	Open in IMG/M
3300006162\|Ga0075030_101361227	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	556	Open in IMG/M
3300006172\|Ga0075018_10299880	Not Available	792	Open in IMG/M
3300006175\|Ga0070712_101195885	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	661	Open in IMG/M
3300006176\|Ga0070765_100019926	All Organisms → cellular organisms → Bacteria → Proteobacteria	4986	Open in IMG/M
3300006358\|Ga0068871_101331279	All Organisms → cellular organisms → Bacteria → Proteobacteria	676	Open in IMG/M
3300006871\|Ga0075434_102140738	Not Available	564	Open in IMG/M
3300007258\|Ga0099793_10457808	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	631	Open in IMG/M
3300007788\|Ga0099795_10294879	Not Available	711	Open in IMG/M
3300009093\|Ga0105240_12398077	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300009137\|Ga0066709_102499635	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	697	Open in IMG/M
3300009826\|Ga0123355_10702369	All Organisms → cellular organisms → Bacteria → Proteobacteria	1161	Open in IMG/M
3300009826\|Ga0123355_11239992	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	756	Open in IMG/M
3300009826\|Ga0123355_11917115	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	553	Open in IMG/M
3300010046\|Ga0126384_11720081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	593	Open in IMG/M
3300010047\|Ga0126382_12084185	Not Available	542	Open in IMG/M
3300010335\|Ga0134063_10413711	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	663	Open in IMG/M
3300010358\|Ga0126370_11442265	Not Available	652	Open in IMG/M
3300010358\|Ga0126370_11485109	Not Available	644	Open in IMG/M
3300010361\|Ga0126378_11473185	Not Available	771	Open in IMG/M
3300010396\|Ga0134126_12850361	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	524	Open in IMG/M
3300010403\|Ga0134123_12538946	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	579	Open in IMG/M
3300012198\|Ga0137364_10325444	Not Available	1144	Open in IMG/M
3300012202\|Ga0137363_10990752	Not Available	714	Open in IMG/M
3300012361\|Ga0137360_11898005	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	501	Open in IMG/M
3300012362\|Ga0137361_10777579	Not Available	872	Open in IMG/M
3300012582\|Ga0137358_10624974	Not Available	722	Open in IMG/M
3300012909\|Ga0157290_10188845	Not Available	691	Open in IMG/M
3300012917\|Ga0137395_10765457	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	699	Open in IMG/M
3300012917\|Ga0137395_11165168	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300012929\|Ga0137404_10795324	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → Chlorobia → Chlorobiales → Chlorobiaceae → Chlorobium/Pelodictyon group → Chlorobium → unclassified Chlorobium → Chlorobium sp.	859	Open in IMG/M
3300012929\|Ga0137404_11069172	Not Available	739	Open in IMG/M
3300013104\|Ga0157370_10957302	Not Available	776	Open in IMG/M
3300014166\|Ga0134079_10356492	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	667	Open in IMG/M
3300014968\|Ga0157379_11352468	Not Available	689	Open in IMG/M
3300016294\|Ga0182041_10231762	All Organisms → cellular organisms → Bacteria → Proteobacteria	1492	Open in IMG/M
3300016371\|Ga0182034_11120215	Not Available	683	Open in IMG/M
3300016445\|Ga0182038_11232562	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	667	Open in IMG/M
3300017927\|Ga0187824_10384119	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	510	Open in IMG/M
3300017970\|Ga0187783_10339832	All Organisms → cellular organisms → Bacteria → Proteobacteria	1093	Open in IMG/M
3300017975\|Ga0187782_10422375	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1015	Open in IMG/M
3300017993\|Ga0187823_10100822	Not Available	863	Open in IMG/M
3300017993\|Ga0187823_10250777	Not Available	599	Open in IMG/M
3300018058\|Ga0187766_11145791	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	560	Open in IMG/M
3300018060\|Ga0187765_11075017	Not Available	557	Open in IMG/M
3300018089\|Ga0187774_10184738	Not Available	1127	Open in IMG/M
3300018431\|Ga0066655_11294722	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	522	Open in IMG/M
3300018433\|Ga0066667_11882575	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	545	Open in IMG/M
3300019789\|Ga0137408_1447749	Not Available	6392	Open in IMG/M
3300020199\|Ga0179592_10300657	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	713	Open in IMG/M
3300020583\|Ga0210401_10306465	All Organisms → cellular organisms → Bacteria → Proteobacteria	1449	Open in IMG/M
3300021170\|Ga0210400_10110828	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2182	Open in IMG/M
3300021180\|Ga0210396_10640164	Not Available	922	Open in IMG/M
3300021372\|Ga0213877_10214158	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	630	Open in IMG/M
3300021377\|Ga0213874_10105829	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	941	Open in IMG/M
3300021401\|Ga0210393_10453360	Not Available	1047	Open in IMG/M
3300021401\|Ga0210393_11326710	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	576	Open in IMG/M
3300021402\|Ga0210385_10156861	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1632	Open in IMG/M
3300021403\|Ga0210397_11051437	Not Available	632	Open in IMG/M
3300021407\|Ga0210383_10970615	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	722	Open in IMG/M
3300021420\|Ga0210394_11465020	Not Available	578	Open in IMG/M
3300021432\|Ga0210384_10250046	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1595	Open in IMG/M
3300021432\|Ga0210384_10370594	All Organisms → cellular organisms → Bacteria → Proteobacteria	1290	Open in IMG/M
3300021432\|Ga0210384_10412851	Not Available	1216	Open in IMG/M
3300021432\|Ga0210384_10536341	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1053	Open in IMG/M
3300021433\|Ga0210391_10385505	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1100	Open in IMG/M
3300021475\|Ga0210392_10111090	All Organisms → cellular organisms → Bacteria → Proteobacteria	1820	Open in IMG/M
3300021477\|Ga0210398_10009781	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	8556	Open in IMG/M
3300021478\|Ga0210402_11423568	Not Available	620	Open in IMG/M
3300021559\|Ga0210409_10741411	Not Available	854	Open in IMG/M
3300021560\|Ga0126371_10561319	Not Available	1290	Open in IMG/M
3300021560\|Ga0126371_10777833	Not Available	1104	Open in IMG/M
3300025913\|Ga0207695_10286031	All Organisms → cellular organisms → Bacteria → Proteobacteria	1542	Open in IMG/M
3300025914\|Ga0207671_10316653	Not Available	1234	Open in IMG/M
3300025915\|Ga0207693_11266654	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	553	Open in IMG/M
3300025938\|Ga0207704_10648752	Not Available	869	Open in IMG/M
3300025941\|Ga0207711_11612685	Not Available	592	Open in IMG/M
3300025972\|Ga0207668_10262219	Not Available	1409	Open in IMG/M
3300026067\|Ga0207678_11077144	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	712	Open in IMG/M
3300026116\|Ga0207674_10885132	Not Available	861	Open in IMG/M
3300026310\|Ga0209239_1026772	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2781	Open in IMG/M
3300026330\|Ga0209473_1265095	Not Available	583	Open in IMG/M
3300026331\|Ga0209267_1056626	All Organisms → cellular organisms → Bacteria → Proteobacteria	1751	Open in IMG/M
3300026523\|Ga0209808_1187038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	718	Open in IMG/M
3300026547\|Ga0209156_10167336	Not Available	1060	Open in IMG/M
3300026552\|Ga0209577_10733821	Not Available	555	Open in IMG/M
3300026557\|Ga0179587_10668201	Not Available	684	Open in IMG/M
3300027158\|Ga0208725_1056742	Not Available	583	Open in IMG/M
3300027546\|Ga0208984_1044645	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	941	Open in IMG/M
3300027633\|Ga0208988_1024469	All Organisms → cellular organisms → Bacteria → Proteobacteria	1553	Open in IMG/M
3300027678\|Ga0209011_1004423	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	4869	Open in IMG/M
3300027857\|Ga0209166_10060870	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2170	Open in IMG/M
3300027867\|Ga0209167_10000816	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	20555	Open in IMG/M
3300028379\|Ga0268266_10143564	All Organisms → cellular organisms → Bacteria → Proteobacteria	2144	Open in IMG/M
3300028379\|Ga0268266_10269068	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1581	Open in IMG/M
3300030520\|Ga0311372_11039504	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1075	Open in IMG/M
3300031057\|Ga0170834_110829989	Not Available	584	Open in IMG/M
3300031232\|Ga0302323_101055244	Not Available	904	Open in IMG/M
3300031446\|Ga0170820_11127645	Not Available	699	Open in IMG/M
3300031474\|Ga0170818_113758245	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	628	Open in IMG/M
3300031640\|Ga0318555_10683492	Not Available	555	Open in IMG/M
3300031668\|Ga0318542_10446139	Not Available	670	Open in IMG/M
3300031708\|Ga0310686_100754782	All Organisms → cellular organisms → Bacteria → Proteobacteria	2504	Open in IMG/M
3300031708\|Ga0310686_113712273	Not Available	732	Open in IMG/M
3300031715\|Ga0307476_10252587	Not Available	1288	Open in IMG/M
3300031715\|Ga0307476_10703652	All Organisms → cellular organisms → Bacteria	748	Open in IMG/M
3300031719\|Ga0306917_10209027	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1481	Open in IMG/M
3300031720\|Ga0307469_10190874	All Organisms → cellular organisms → Bacteria → Proteobacteria	1588	Open in IMG/M
3300031726\|Ga0302321_100432791	All Organisms → cellular organisms → Bacteria → Proteobacteria	1439	Open in IMG/M
3300031740\|Ga0307468_100100451	All Organisms → cellular organisms → Bacteria	1718	Open in IMG/M
3300031740\|Ga0307468_101650866	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	601	Open in IMG/M
3300031753\|Ga0307477_10017701	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	4866	Open in IMG/M
3300031753\|Ga0307477_10520655	Not Available	807	Open in IMG/M
3300031754\|Ga0307475_10423673	Not Available	1070	Open in IMG/M
3300031795\|Ga0318557_10176974	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	970	Open in IMG/M
3300031823\|Ga0307478_10542602	Not Available	971	Open in IMG/M
3300031833\|Ga0310917_11053094	Not Available	544	Open in IMG/M
3300031860\|Ga0318495_10314609	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	696	Open in IMG/M
3300031893\|Ga0318536_10430945	Not Available	665	Open in IMG/M
3300031896\|Ga0318551_10150290	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	1271	Open in IMG/M
3300031897\|Ga0318520_10167727	Not Available	1282	Open in IMG/M
3300031912\|Ga0306921_10980629	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	955	Open in IMG/M
3300031946\|Ga0310910_10457137	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1013	Open in IMG/M
3300031947\|Ga0310909_11267767	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	594	Open in IMG/M
3300031959\|Ga0318530_10087120	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1228	Open in IMG/M
3300032001\|Ga0306922_11867755	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	589	Open in IMG/M
3300032035\|Ga0310911_10446878	Not Available	749	Open in IMG/M
3300032076\|Ga0306924_12420985	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	529	Open in IMG/M
3300032180\|Ga0307471_100067575	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3062	Open in IMG/M
3300032180\|Ga0307471_101839662	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	756	Open in IMG/M
3300032205\|Ga0307472_101774122	Not Available	612	Open in IMG/M
3300032783\|Ga0335079_10194862	All Organisms → cellular organisms → Bacteria → Proteobacteria	2251	Open in IMG/M
3300032783\|Ga0335079_12381235	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	501	Open in IMG/M
3300032892\|Ga0335081_11256621	Not Available	839	Open in IMG/M
3300032892\|Ga0335081_11364870	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → Chlorobia → Chlorobiales → Chlorobiaceae → Chlorobium/Pelodictyon group → Chlorobium → unclassified Chlorobium → Chlorobium sp.	795	Open in IMG/M
3300032892\|Ga0335081_11767742	Not Available	670	Open in IMG/M
3300033158\|Ga0335077_10497478	Not Available	1290	Open in IMG/M
3300033158\|Ga0335077_10579540	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1174	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	85.47%
Host-Associated	Host-Associated	14.53%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.56%
Plants	Host-Associated → Plants	12.79%
Aquatic	Environmental → Aquatic	2.91%
Arthropoda	Host-Associated → Arthropoda	1.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	80.81%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.14%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.49%
Freshwater	Environmental → Aquatic → Freshwater	1.74%
Peat	Environmental → Terrestrial → Peat	1.74%
Digestive System	Host-Associated → Arthropoda → Digestive System	1.74%
Sediment	Environmental → Aquatic → Sediment	1.16%
Roots	Host-Associated → Plants → Roots	1.16%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	66.28%
Loam	Environmental → Terrestrial → Soil → Loam	7.56%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.07%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.07%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.49%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.74%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.74%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	1.74%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.16%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.58%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.58%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	30.23%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.51%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	14.53%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.98%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.07%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.07%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.49%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.91%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.74%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.74%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	1.74%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.16%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.58%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.58%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	11.63%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.14%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	6.98%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	4.65%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.07%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.07%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.07%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.91%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.91%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.91%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.74%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.74%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.74%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	1.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.74%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.16%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.16%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.16%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.16%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	1.16%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.16%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.16%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.58%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.58%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.58%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.58%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.58%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.58%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.58%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.58%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.58%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.58%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.58%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.58%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm	Environmental	Open in IMG/M
3300004139	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF230 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009826	Embiratermes neotenicus P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P1	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012909	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S149-409B-1	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017993	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021372	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R01	Environmental	Open in IMG/M
3300021377	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7	Host-Associated	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027158	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF011 (SPAdes)	Environmental	Open in IMG/M
3300027546	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027633	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027678	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J12803_1070852022	3300000955	Soil	EQLVALASFDCHRALALLTESVAEYQAEADIRDYVWTRKAVLPHAPAAKVADFAAKRRQSEAVKPQGQTPA*
JGI25381J37097_10940971	3300002557	Grasslands Soil	MEHRLSWPKMEQILNDLLVALASFDCHDALELLTASVAEYQADTEVRDYVWTRKAVSPHAPATNVADFAAKRRLSEAAKPTQGQNPLS*
Ga0058897_110345071	3300004139	Forest Soil	EHRLSWAKMEQILNDLLVALASFDCHRALELLNASVAEYQADMEIRDYVWTRKALLPHAPVAKVADFAAKRRLSEAAKPTQGQNPLG*
Ga0066672_105440472	3300005167	Soil	VALASFDCHDALELLTASVAEYQADTEVRDYVWTRKAVSPHAPATNVADFAAKRRLSEAAKPTQGQNPLS*
Ga0066672_105440492	3300005167	Soil	WPKMEQILNDLLVALASFDCHDALELLTASVAEYQADTEVRDYVWTRKAVLPHAPATNVADFAAKRRLSEAAKPTQGQSPLS*
Ga0070690_1012956601	3300005330	Switchgrass Rhizosphere	MQQLLNDLLVALSGFDCHRALALLTEAVAEYNGQGIEISDYVWTRKQVLPHVSDAKIADFAAKRRSSEAAGKPSHEQRPA*
Ga0070680_1017595322	3300005336	Corn Rhizosphere	IEHRLSWPKMQQILNELLVALASFDCHSALALLAESVAEYETDADIRDYVWTRKAVLPHAPAAKVADFAAKRRLSEAAKPTQGQNPVG*
Ga0070668_1014246033	3300005347	Switchgrass Rhizosphere	SIPWPRMQQLLNDLLVALASFDCRRALALLSESVAEYRTVHAISDYVWTRKAIAPATEGGKVADFAAKRRHSDAAKPSTGQHPT*
Ga0070673_1011133121	3300005364	Switchgrass Rhizosphere	LNDLLVALSGFDCHRALALLTEAVAEYNGQGIEISDYVWTRKQVLPHVSDAKIADFAAKRRSSEAAGKPSHEQRPA*
Ga0070708_1009259201	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	QQILNELLVALASFDCHSALALLAESVAEYEADADIRDYVWTRKAVLPHAPAAKVADFAAKRRLQEAVKPTQGQTPSA*
Ga0070663_1017910462	3300005455	Corn Rhizosphere	HRALALLAEAVAEYHADIDIRDYVWTRKAILPHAPAAKIADFAAKRRLQEAAKPTQGQNPLP*
Ga0070730_100580151	3300005537	Surface Soil	DCQRALALLTESVAEYPSSPDIRDYVWNRKTVLPHAGGAKVADFAAKRRQSESAKPAPGQSPPSP*
Ga0070730_109554231	3300005537	Surface Soil	AMEHHLPWARMQEILNDLLVALASFDCHRALALLRESVAEYDSGRDIRDYVWTHKAVQPNAPAAKVADFAAKRRQSEAAAKPLAPNPSPLPS*
Ga0070731_100338624	3300005538	Surface Soil	ASFDCHRALALLAESVAEYKSDLDIRDYVWTRKEVLPHATAAKVADFAAKRRLSEAGKPTQGQNPV*
Ga0070731_105359992	3300005538	Surface Soil	DLLVALASFDCHRAVTLLADSVAEYQSDLDIRDYVWTRKAVLPHAPGAKVADFAAKRRLSEAAKPTQGQNPV*
Ga0070731_110096161	3300005538	Surface Soil	ALASFDCHRAIALLGEAVAEYQVASDIRDYVWIRKALLPNAPAGKVADFAAKRRLSEAGKPHGQTPLN*
Ga0066697_104520441	3300005540	Soil	FDCHHALELLTASVAEYQADMDIRDYVWTRKAVLPHAPDAKVADFAAKRRLSEAAKPAQGQNPLA*
Ga0070733_100043501	3300005541	Surface Soil	DLLVALASFDCHRALALLTESVAEYQGDPEIRDYVWARKALLPHAPAVKVADFAAKRRLSEAAKPTQGQNPVA*
Ga0066661_102466711	3300005554	Soil	LASFDCHDALELLTASVAEYQADTEVRDYVWTRKVVSPHAPATNVADFAAKRRLSEAAKPTQGQNPLG*
Ga0066661_105017442	3300005554	Soil	KMEQILNDLLVALASFDCHDALELLTTSVAEYQADTEVRDYVWTRKAVSPHAPATNVADFAAKRRLSEAAKPTQGQNPLS*
Ga0066670_103772051	3300005560	Soil	SLASFDCHHALELLTASVAEYRADMDIRDHVWTRKAVLPHTPDAKVADFAAKRRLSEAAKPTQGQNPIA*
Ga0066670_104031321	3300005560	Soil	SLASFDCHHALELLTASVAEYRADMDIRDHVWTRKAVLPHAPDAKVADFAAKRRLSEAAKPAQGQNPLA*
Ga0066670_108191541	3300005560	Soil	WPKMEQILNDLLVALASFDCHDALELLTASVAEYQADTEVRDYVWTRKAVSPHAPATNVADFAAKRRLSEAAKPTQGQNPLS*
Ga0066699_111781392	3300005561	Soil	NDLLVALASFDCHHALELLTVSVAEYQADMDIRDYVWTRKAVLPHAPDAKVADFAAKRRLSEAAKPAQGQNPLA*
Ga0066703_101247621	3300005568	Soil	WPKMEQILNDLLVALASFDCHDALELLTASVAEYQADTEVRDYVWTRKAVSPHAPATNVADFAAKRRLSEAAKPAQGQNPLS*
Ga0066705_100735131	3300005569	Soil	AMEHRLPWSKMEQILNDLLVALASFDCHHALELLTASVAEYQADVEIRDHVWTRKAVLPHAPDAKVADFAAKRRLSEAAKPTQGQNPLA*
Ga0066702_100193804	3300005575	Soil	DLLVALASFDCHHALELLTASVAEYQADMDIRDYVWTRKAVLPHAPDAKVADFAAKRRLSEAAKPAQGQNPLA*
Ga0066708_105589012	3300005576	Soil	MEHRLPWSKMEQILNDLLVSLASFDCHHALELLTASVAEYRADMDIRDHVWTRKAVLPHAPDAKVADFAAKRRLSEAAKPTQGQNPIA*
Ga0068857_1022350311	3300005577	Corn Rhizosphere	PWPRMQQLLNELLVALASFDCRRSLALLAESVAEYHATHVISDYIWSRKSVSLPADGAKVADFAAKRRLSDAAGKPVQGQHPS*
Ga0066691_109173002	3300005586	Soil	MEHRLSWPKMEQILNGLLVALASFDCHGALELLTAGVAEYQADFDIRDYVWTRKALLPHSPASKVADFAAKRRLSEAAKPTQGQNPLA*
Ga0066903_1015833462	3300005764	Tropical Forest Soil	VALASFDCHRALSLLAEAVAEYEADVDIRDYVWTRKAILPHAPAAKVADFAAKRRLQEAGKPTQGQLPGG*
Ga0068860_1021718361	3300005843	Switchgrass Rhizosphere	AMEHRLPWMRMQQILNDLLVALSSFDCHRALNLLAESVAEYNSQAVEIRDHVWTRKQAAPHTSGDTKIADFAAKRRSSEVAIKPSHEQRPA*
Ga0068860_1023961651	3300005843	Switchgrass Rhizosphere	MEHSIPWPRMQQLLNDLLVALASFDCRRALALLAESVAEYRTVHAISDYVWTRKSIAPTTEGGKVADFAAKRRHSDAVAKPSQGQHPP*
Ga0068862_1000131391	3300005844	Switchgrass Rhizosphere	RMQQVLNDLLIALSNFDCHRALGLLTEAVAEYNGQGIEISDYVWTRKQVLPHVSDAKIADFAAKRRSSEAAGKPSHEQRPA*
Ga0070766_110944852	3300005921	Soil	SWPKMQQILNDLLVALASFDCHRALSLLTESVAEYQGEPDIRDYVWTRKAVLPHAPAVKVADFAAKRRLSEAAKPNQGQNPVA*
Ga0075030_1013612271	3300006162	Watersheds	PMILRAIEHRLTWPKMELVLNELLVALASFDCHRALALLAEAVAEYEADADIRDYVWTRKAVLPHAPAAKVADFAAKRRLSEAAKPTQGQNPLS*
Ga0075018_102998802	3300006172	Watersheds	RLPWMRMQQVLNDLLIALSNFDCHRALGLLTEAVAEYNGHGIEISDYVWTRKQVLPHVSDAKIADFAAKRRSSEAAGKPSHEQRPA*
Ga0070712_1011958851	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	RAMEHRLPWQRIHQVLNDLLVALASFDCSRALALLSDSVAEYVQHPELRDYVWKRKAALPHTPDAKIADFAAKRRSSEVGKPGHGQNPIN*
Ga0070765_1000199265	3300006176	Soil	LNELLVALASFDCHRALALLTEAVAEYQAEVDIRDYVWTRKAVLPNAPATKVADFAAKRRLQEAGKPTQGQTPSA*
Ga0068871_1013312792	3300006358	Miscanthus Rhizosphere	QLLNDLLVALASFDCRRALALLAESVAEYRTVHAISDYVWTRKAIAPAADGAKVADFAAKRRHSDAAKPSQGTHPT*
Ga0075434_1021407382	3300006871	Populus Rhizosphere	LVALASFDCRRALALLAESVAEYRTVHAISDYVWTRKSIAPTAEGGKVADFAAKRRHSDAVAKPSQGQHPP*
Ga0099793_104578082	3300007258	Vadose Zone Soil	RAIEHRLSWPKMEQILNDLLVALASFDCHSALELLTVAVAEYQADVEIRDYVWTHKAVLPHAPGAKIADFAAKRRLSEAAKPTQGQTPLA*
Ga0099795_102948791	3300007788	Vadose Zone Soil	SFDCHHALELLTASVAEYRADTEIRDYVWTRKAVLPHASDAKVADFAAKRRLSEAAKPIQGQSPVP*
Ga0105240_123980771	3300009093	Corn Rhizosphere	ILNDLLVSLASFDCHRTLGLLTESVAEYTQHPEIRDYVWTRKAAGAPSHPVDAKNADFAAKRRISESAKPGHGQTPAN*
Ga0066709_1024996351	3300009137	Grasslands Soil	AMEHRLPWPKMEQILNDLLVALASFDCHDALELLTASVAEYQADTEVRDYVWTRKAVSPHAPATNVADFAAKRRLSEAAKPTQGQTPLS*
Ga0123355_107023691	3300009826	Termite Gut	LASFDCHRALALLTESVAEYQIEVDIRDYVWTRKAVLPHAPAAKVADFAAKRRLSEAAKPTQGQNPVG*
Ga0123355_112399921	3300009826	Termite Gut	LPWQRMQQILNEQLVALASFDCHRALTLLTESVAEYQTEVDIRDYVWTRKAVLPHAPAAKVADFAAKRRLSEAAKPTQGQNPVG*
Ga0123355_119171152	3300009826	Termite Gut	PWQRMQQILNEQLVALASFDCHRALTLLTESVAEYQTEVDIRDYVWTRKAVLPHAPAAKVADFAAKRRLSEAAKPTSGQNPVG*
Ga0126384_117200812	3300010046	Tropical Forest Soil	RAIEHHLPWGRMQQMLNEQLVALASFDCHRALALLAESVAEYQAEVDIRDYVWTRKAVLPHAPAAKVADFAAKRRQSEAVKPQGQTPA*
Ga0126382_120841852	3300010047	Tropical Forest Soil	ASFDCHRALALLTESVAEYQAEADIRDYVWTRKAVLPHAPAAKVADFAAKRRQSEAVKPQGQTPA*
Ga0134063_104137112	3300010335	Grasslands Soil	MEHRLPWSKMEQILNDLLVSLASFDCHHALELLTASVAEYRADMDIRDHVWTRKAVLPHAPDAKVADFAAKRRLAEAAKPTQGQNPIA*
Ga0126370_114422652	3300010358	Tropical Forest Soil	LVALASFDCHSALALLSESVAEYETDADIRDYVWTRKAILPHAPAAKVADFAAKRRLQEAGKPTQGQSPIA*
Ga0126370_114851091	3300010358	Tropical Forest Soil	RMQQMLNEQLVALASFDCHRAVALLAESVAEYQAELDIRDYVWTRKAVLPHAPAAKVADFAAKRRQSEAVKPQGQTPA*
Ga0126378_114731852	3300010361	Tropical Forest Soil	QMLNEQLVALASFDCHRALALLAESVAEYQAEVDIRDYVWTRKAVLPHAPAAKVADFAAKRRQSEATKPQGQTPA*
Ga0134126_128503612	3300010396	Terrestrial Soil	NEFLVALASFDCHRALALLAESVAEYQADVEIRDYVWTRKALLPHAPAAKVADFAAKRRLSEAAKPTQGQNPGG*
Ga0134123_125389462	3300010403	Terrestrial Soil	RMQQLLNDLLVALASFDCRRALALLSESVAEYRTVHAISDYVWTRKAIAPATEGGKVADFAAKRRHSDAAKPSTGQHPT*
Ga0137364_103254442	3300012198	Vadose Zone Soil	LLVALASFDCHHALELLTASVAEYQADMDIRDYVWTRKAVLPHAPDAKVADFAAKRRLSEAAKPAQGQNPLA*
Ga0137363_109907521	3300012202	Vadose Zone Soil	LNDLLVALASFDCHSALELLTVAVAEYQADTEIRDYVWTHKAVLPHAPAAKIADFAAKRRLSEAAKPTQGQTPLA*
Ga0137360_118980051	3300012361	Vadose Zone Soil	LASFDCHQALELLTASVAEYQADVDIRDHVWTRKAVLPHTPDAKVADFAAKRRLSEAAKPTQGQNPLPS*
Ga0137361_107775791	3300012362	Vadose Zone Soil	VLNDLLVALASFDCHQALELLTASVAEYQADTEIRDYVWTRKAVLPHTPDAKVADFAAKRRLSEAAKPTQGQNPLPS*
Ga0137358_106249742	3300012582	Vadose Zone Soil	VALASFDCHHALELLTASVAEYRADTEIRDYVWTRKAVLPHAPDAKVADFAAKRRLSEAAKPTQGQTPLS*
Ga0157290_101888452	3300012909	Soil	QQLLNDLLIALSSFDCHRSLALLAEAVAEYNGQGMEISDYVWTRKQVLPHASDAKIADFAAKRRSSEAAGKPGHEQRPA*
Ga0137395_107654572	3300012917	Vadose Zone Soil	MEHRLSWPKMEQVLNDLLVALASFDCHQALELLTASVAEYHADSEIRDHVWMRKAVLPHAPDTKVADFAAKRRLSEAAKPTQGQNPLP*
Ga0137395_111651682	3300012917	Vadose Zone Soil	DLLVALASFDCHSALELLTAAVAEYQADVEIRDYVWRRKALLPHAPAAKVADFAAKRRLSEAAKPTQGQNPLG*
Ga0137404_107953241	3300012929	Vadose Zone Soil	HRLPWLRMQQILNDLLVALSTFDCHRALGLLVESVAEYNSQGMEIRDHVWTRKQTVPHSADAKIADFAAKRRSSEAGIKPGHEQRPA*
Ga0137404_110691722	3300012929	Vadose Zone Soil	ALASFDCESAVALLTDSVAEYRQGGEVCDYVWTRKALLPHAADAKVADFAAKRRLVEAGSKPSQGQAPSA*
Ga0157370_109573021	3300013104	Corn Rhizosphere	SFDCHRALALLAEAVAEYHADIDIRDYVWTRKAILPHAPAAKIADFAAKRRLQEAAKPTQGQNPLP*
Ga0134079_103564922	3300014166	Grasslands Soil	EHRLPWSKMEQILNDLLVALASFDCHHALELLTASVAEYQADMDIRDYVWTRKAVLPHAPDAKVADFAAKRRLSEAAKPAQGQNPIA*
Ga0157379_113524681	3300014968	Switchgrass Rhizosphere	ELLVALSSFDCHRALGLLAESVAEYNTQAMEIRDYVWTRKLVVPHAADAKIADFAAKRRSSEAGIKPGHEQRPA*
Ga0182041_102317622	3300016294	Soil	HLPWARMQQILNEQLVALASFDCHRALALLTESVAEYQAEMDIRDYVWTRKSVLPHAPPAKLADFAAKRRQSEAAVKPQGQTPA
Ga0182034_111202151	3300016371	Soil	NEQLVALASFDCHRALALLTESVAEYLAEVDIRDYVWTRKAVLPHAPAAKVADFAAKRRQTEAIKPQGQTPA
Ga0182038_112325621	3300016445	Soil	DCHRALALLAESVAEYQAEVDIRDYVWTRKALLPHAPAAKVADFAAKRRLSEAGKPTPGQNPVA
Ga0187824_103841192	3300017927	Freshwater Sediment	LPWMRMQQILNELLVALASFDCHRAVGLLAESVAEYSQGLELRDYVWTRKAVLPHAVDIKIADFAAKRRSSEAASKPGHGQNPV
Ga0187783_103398321	3300017970	Tropical Peatland	LASFDCHRALALLTESVAEYQNEVEIRDYVWTRKAILPHAPAAKVADFAAKRRLSEAGKPAQGQNPLN
Ga0187782_104223752	3300017975	Tropical Peatland	HPMILRAIEHHLPWAKMQQVLNELLVALASFDCHRALALLTESVAESQTEVDIREYVWTRKAPLPHAPAAKVADFAAKRRLSEAGKPTQGQNPVA
Ga0187823_101008222	3300017993	Freshwater Sediment	LVALASFDCHSALALLAESVAEYEADADIRDYVWTRKALLPHAPAAKVADFAAKRRLSEAAKPTQGQNPVG
Ga0187823_102507772	3300017993	Freshwater Sediment	LNELLVALASFDCHRALALLAESVAEYEADADIRDYVWTRKAVLPHAPAAKVADFAAKRRLQEAAKPTQGQNPVA
Ga0187766_111457911	3300018058	Tropical Peatland	PWPRMQETLNDLLVALASFDCHRALALLTESVVEYQSSADIRDYVWARKAVLPHAPASKVADFAAKRRQAEITKPAPGPSPIS
Ga0187765_110750171	3300018060	Tropical Peatland	ASFDCHRALTLLAEAVAEYEADVDIRDYVWTRKAILPHAPAAKVADFAAKRRLQEAGKPTQGQSPLA
Ga0187774_101847381	3300018089	Tropical Peatland	CHRALALLSESVAEYQSGADIRDYVWTRKAVLPHAPTAKVADFAAKRRQSEASKPAPGPSPIS
Ga0066655_112947221	3300018431	Grasslands Soil	KMEQILNDLLVALASFDCHDALELLTASVAEYQADTEVRDYVWTRKAVSPHAPATNVADFAAKRRLAEAAKPTQGQNPLS
Ga0066667_118825752	3300018433	Grasslands Soil	EQILNDLLVALASFDCHDALELLTASVAEYQADTEVRDYVWARKAVSPHAPATNVADFAAKRRLSEAAKPTQGQNPLS
Ga0137408_14477495	3300019789	Vadose Zone Soil	MILRAIEHRLPWMRMQQILNELLVALSSFDCHRALALLAESVAEYNGQGMEIRDYVWTRKQALPHATDAKVADFAAKRRSSEAGIKPGHEQRPA
Ga0179592_103006571	3300020199	Vadose Zone Soil	AMEHRLSWPKMEQVLNDLLVALASFDCHQALELLTASVAEYQADTEIRDYVWTRKAALPHAPDAKVADFAAKRRLSEAAKPTQGQSPVP
Ga0210401_103064651	3300020583	Soil	CHRALALLSESVAEYEADVDIRDYVWTRKAVLPHAPAAKVADFAAKRRLQEAGKPTQGQTPSA
Ga0210400_101108281	3300021170	Soil	EILNDLLVALASFDCHRALYLLSESVAEYQSGADIRDYVWTRKAVLPHAPGAKVADFAAKRRQSEGGKAGPGQNPLN
Ga0210396_106401642	3300021180	Soil	LLVALASFDCHRALALLSDAVAEYRAEGEIRDYVWTRKAVLPHAPAAKVADFAAKRRLSEAAKPTQNPLG
Ga0213877_102141582	3300021372	Bulk Soil	RAIEHRLGWAKMQQILNELLVALASFDCHRALALLTDAVAEYQAEIDIRDYVWTRKAVLPHAPAAKVADFAAKRRLSEAGKPQGQNPIV
Ga0213874_101058291	3300021377	Plant Roots	AIEHHLPWARMQQILNEQLVALASFDCHRALALLTESVAEYQAEVDIRDYVWTRKAVLPHAPAAKVADFAAKRRQSEAAVKPQGQTPA
Ga0210393_104533602	3300021401	Soil	RMEQILNELLVALASFDCHRALALLAEAVAEYEADADIRDYVWARKALLPHAPAAKVADFAAKRRLQEATKPSQGQNPNA
Ga0210393_113267102	3300021401	Soil	ILRAIEHRLPWLRMQQILNDLLVALASFDCHRALGLLAESVAEYNSQAMEIRDYVWMRKTIVPHVADAKIADFAAKRRSSEAASKPGHGPNPI
Ga0210385_101568612	3300021402	Soil	MEHRLAWPRMQEYLNDFLVALASFDCSRALQLLSESVAEYHTGVDIRDHVWTRKAVLPHAPGAKVADFAAKRRLSEAGKPTQGQGPIA
Ga0210397_110514372	3300021403	Soil	DLLVALASFDCHSALELLTLAVAEYQADLEIRDYVWTRKALLPHAPAAKIADFAAKRRLSEAAKPTQGQNPVG
Ga0210383_109706151	3300021407	Soil	RLAWPRMELILNELLVALASFDCHYALALLADAVAEYQADVDIRDYVWRRKAILPHAPAAKVADFAAKRRLQEAGKPTQGQNPLA
Ga0210394_114650202	3300021420	Soil	FDCHRALALLSESVAEYEADVDIRDYVWTRKAVLPHAPAAKVADFAAKRRLQEAVKPTQGQTPSA
Ga0210384_102500461	3300021432	Soil	HPMVMRAIEHRLSWPKMEQILNDLLVALASFDCHRALELLSVSVAEYQADMDIRDYVWTRKALLPHAPAAKIADFAAKRRLSEAAKPPTQGQNPLG
Ga0210384_103705942	3300021432	Soil	MQQILNDLLVALASFDCHRANGLLTVAVAECQAGNDIRDNLWTRKPLLPHAPAAKLGDSAAKRCLPEVGKPMQGQNPLG
Ga0210384_104128512	3300021432	Soil	AWPRMQEILNDLLVALASFDCQRALALLAESVAEYQSSPDIRDYVWNRKTVLPHATGAKVADFAAKRRQSEGAKPAPGQSPPP
Ga0210384_105363412	3300021432	Soil	LPWPRMQEILNDLLMALASFDCQRALALLTESVAEYQSSPEIRDYVWNRKVALPHAAATNVADFAAKRRQSEVGKLAPGQSPLPS
Ga0210391_103855051	3300021433	Soil	EHRLAWPRMELVLNELLVALASFDCHRALALLAEAVAEYQADVDIRDYVWTRKAVLPHAPAAKIADFAAKRRLSEAAKPTQGQNPIS
Ga0210392_101110901	3300021475	Soil	RLAWPRMEQILNDLLVALASFDCHRALALLSESVAEYEADVDIRDYVWTRKAVLPHAPAAKVADFAAKRRLQEAVKPTQGQTPSA
Ga0210398_100097817	3300021477	Soil	VALASFDCHYALALLADAVAEYQADVDIRDYVWRRKAILPHAPAAKVADFAAKRRLQEAGKPTQGQNPLA
Ga0210402_114235682	3300021478	Soil	ALASFDCHRALALLSESVAEYEADVDIRDYVWTRKAVLPHAPAAKVADFAAKRRLQEAVKPTQGQTPSA
Ga0210409_107414112	3300021559	Soil	QILNDLLVALASFDCHSALELLTLAVAEYQADLEIRDYVWTRKALLPHAPAAKIADFAAKRRLSEAAKPTQGQNPVG
Ga0126371_105613192	3300021560	Tropical Forest Soil	LIALASFDCQRSLALLTDSVAEYQWNADIRDYVWARKAVLPHAPASNVADFAAKRRQSEGAKPAPGQNPLN
Ga0126371_107778332	3300021560	Tropical Forest Soil	CHRALALLTEAVAEYQSSADIRDYVWARKAVPSHALATKVADFAAKRRQSEVAKPAPGPSPLS
Ga0207695_102860312	3300025913	Corn Rhizosphere	NDLLIALSNFDCHRALGLLTEAVAEYNGQGIEISDYVWTRKQVLPHVSDAKIADFAAKRRSSEAAGKPSHEQRPA
Ga0207671_103166531	3300025914	Corn Rhizosphere	QILNDLLIALSTFDCHRALGMLTESVAEYNGQGMEINDYVWTRKQVLPHTSDAKIADFAAKRRSSEAGKPGHEQRPA
Ga0207693_112666541	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	WQRIHQVLNDLLVALASFDCSRALALLSDSVAEYVQHPELRDYVWKRKAALPHTPDAKIADFAAKRRSSEVGKPGHGQNPIN
Ga0207704_106487522	3300025938	Miscanthus Rhizosphere	CHRALALLAEAVAEYHADIDIRDYVWTRKAILPHAPAAKIADFAAKRRLQEAAKPTQGQNPLP
Ga0207711_116126851	3300025941	Switchgrass Rhizosphere	KMEQVLNELLVALASFDCHRALALLAEAVAEYHADIDIRDYVWTRKAILPHAPAAKIADFAAKRRLQEAAKPTQGQNPLP
Ga0207668_102622193	3300025972	Switchgrass Rhizosphere	SIPWPRMQQLLNDLLVALASFDCRRALALLSESVAEYRTVHAISDYVWTRKAIAPATEGGKVADFAAKRRHSDAAKPSTGQHPT
Ga0207678_110771442	3300026067	Corn Rhizosphere	PKMEQVLNELLVALASFDCHRALALLAEAVAEYHADIDIRDYVWTRKAILPHAPAAKIADFAAKRRLQEAAKPTQGQNPLP
Ga0207674_108851321	3300026116	Corn Rhizosphere	PWPRMQQLLNELLVALASFDCRRSLALLAESVAEYHATHVISDYIWSRKSVSLPADGAKVADFAAKRRLSDAAGKPVQGQHPS
Ga0209239_10267721	3300026310	Grasslands Soil	VALASFDCHHALELLTASVAEYQADMDIRDYVWTRKAVLPHAPDAKVADFAAKRRLSEAAKPAQGQNPLA
Ga0209473_12650952	3300026330	Soil	LASFDCHHALELLTVSVAEYQADMDIRDYVWTRKAVLPHAPDAKVADFAAKRRLSEAAKPAQGQNPLA
Ga0209267_10566261	3300026331	Soil	QILNDLLVALASFDCHDALELLTASVAEYQADTELRDYVWTRKAVSPHAPATNVADFAAKRRLSEAAKPTQGQNPLS
Ga0209808_11870382	3300026523	Soil	MEHRLPWSKMEQILNDLLVALASFDCHHALELLTASVAEYQADMDIRDYVWTRKAVLPHAPDAKVADFAAKRRLSEAAKPAQGQNPLA
Ga0209156_101673361	3300026547	Soil	LNDLLVALASFDCHDALELLTASVAEYQADTEVRDYVWTRKAVSPHAPATNVADFAAKRRLSEAAKPTQGQNPLS
Ga0209577_107338211	3300026552	Soil	ALASFDCHDALELLTASVAEYQADTEVRDYVWTRKAVSPHAPATNVADFAAKRRLSEAAKPTQGQNPLS
Ga0179587_106682011	3300026557	Vadose Zone Soil	MEQVLNDMLVALASFDCHQALELLTASVAEYQADTKIRDHVWMRKAVLPHPPDAKVADFAAKRRLSEAPKPTQGQNPLP
Ga0208725_10567421	3300027158	Forest Soil	LNELLVALASFDCHRALALLSESVAEYQAEVDIRDYVWTRKALLPHAPAAKVADFAAKRRLSEAGKPTQGQNPVA
Ga0208984_10446453	3300027546	Forest Soil	LSWPKMEQILNDLLVALASFDCHQALELLSESVAEYQADTEIRDYVWTRKALLPHAPAAKVADFAAKRRLSEAAKPTQGQNPLG
Ga0208988_10244691	3300027633	Forest Soil	WPKMEQILNDLLVALASFDCHRALELLTASVAEYQADMEIRDYVWTRKAVLPHAPGAKVADFAAKRRLSEAAKPTQGQNPLG
Ga0209011_10044234	3300027678	Forest Soil	PMILRAIEHRLSWPKMEQILNDLLVALASFDCHSALELLTLAVAEYQADTEIRDYVWTRKAVLPHAPAAKIADFAAKRRLSEAGKPTQGQNPLG
Ga0209166_100608703	3300027857	Surface Soil	ILNELLVALASFDCQRALALLTESVAEYPSSPDIRDYVWNRKTVLPHAGGAKVADFAAKRRQSESAKPAPGQSPPSP
Ga0209167_1000081622	3300027867	Surface Soil	FDCHRALALLTESVAEYQGDPEIRDYVWARKALLPHAPAVKVADFAAKRRLSEAAKPTQGQNPVA
Ga0268266_101435641	3300028379	Switchgrass Rhizosphere	WIRMQQLLNDLLVALSGFDCHRALALLTEAVAEYNGQGIEISDYVWTRKQVLPHVSDAKIADFAAKRRSSEAAGKPSHEQRPA
Ga0268266_102690683	3300028379	Switchgrass Rhizosphere	LRMQQILNDLLVALSTFDCHRALGLLVESVAEYNSQGLEIRDHVWTRKQTVPHAADAKIADFAAKRRSSEAGIKPGHEQRPA
Ga0311372_110395042	3300030520	Palsa	IEHHLPWMKMQQILNDLLVALASFDCHRTLALLAEAVAEYQAEVDIRDYVWTRKAVLPHATAAKVADFAAKRRLSEAGKPTQGQNPN
Ga0170834_1108299891	3300031057	Forest Soil	QLLNELLVALASFDCHRALALLDEAVAEYQADVDIRDYVWRRKAILPNAPAAKVADFAAKKRLQDAAKPTQGQNPSA
Ga0302323_1010552441	3300031232	Fen	QQILNDLLIALSSFDCHRSLALLAEAVAEYNGQGMEISDYVWRRKLVLPHSSDAKIADFAAKRRSSEAAGKPGHEQRPA
Ga0170820_111276452	3300031446	Forest Soil	LNELLVALASFDCHRALALLSESVAEYEADVDIRDYVWTRKAVLPHAPAAKVADFAAKRRLQEAGKPAQGQTPSA
Ga0170818_1137582451	3300031474	Forest Soil	MILRAIEHRLPWMRMQQILNELLVALSSFDCHRALGLLAESVAEYNGQGMEIRDYVWTRKQALPHASDAKIADFAAKRRSSEAGIKPSHEQRPA
Ga0318555_106834921	3300031640	Soil	LNEQLVALASFDCHRALALLAESVAEYQAEVDIRDYVWTRKAVLPHAPAAKVADFAAKRRQSEATKPQGQSPA
Ga0318542_104461392	3300031668	Soil	EQLVALASFDCHRALALLTESVAEYQAEMDIRDYVWTRKAVLPHAPAAKVADFAAKRRQSEAGVKPQGQSPA
Ga0310686_1007547823	3300031708	Soil	NELLVALASFDCHRAVALLAEAVAEYEADVDIRDYVWTRKAVLPHAPAAKVADFAAKRRLSEAGKPTQGQNPVS
Ga0310686_1137122731	3300031708	Soil	CHRALALLSESVAEYQSGADIREYVWMRKAVLPHATHANVADFAAKRRQSEAGKPAPGQSPPS
Ga0307476_102525871	3300031715	Hardwood Forest Soil	DCHRALALLAEAVAEYQADVDIRDYVWTRKAVLPHAPAAKIADFAAKRRLSEAAKPTQGQNPIS
Ga0307476_107036521	3300031715	Hardwood Forest Soil	QILNELLVALASFDCHSAVALLAASVAEYQAEVDIRDYVWTRKTVLPHSPAAKVADFTAKRRLSEASKPTQGQNPLS
Ga0306917_102090271	3300031719	Soil	ARMQQMLNEQLVALASFDCHRALALLAESVAEYQAEVDIRDYVWTRKALLPHAPAAKVADFAAKRRLSEAGKPTPGQNPVA
Ga0307469_101908741	3300031720	Hardwood Forest Soil	ILNDLLVALASFDCHSALELLTVAVAEYQADTEIRDYVWTHKAVLPHAPAAKIADFAAKRRLSEAAKPTQGQNPLG
Ga0302321_1004327911	3300031726	Fen	ILNDLLVALSSFDCHRALALLTESVAEYNGQGMEISDYVWRRKLVLPHPSDAKIADFAAKRRSSEAAGKPGHEQRPA
Ga0307468_1001004511	3300031740	Hardwood Forest Soil	LVALASFDCHRAVALLAEAVAEYRADNDIRDYVWTRKAVLPHAPAAKVADFSAKRRLQEAGKPTQGQTPIA
Ga0307468_1016508662	3300031740	Hardwood Forest Soil	AMEHRLAWPKMEQVLNELLVALASFDCHRALALLAEAVAEYEADLDIRDYVWTRKAILPHAPAAKIADFAAKRRLQEAAKPTQGQNPLP
Ga0307477_100177011	3300031753	Hardwood Forest Soil	ILNELLVALASFDCHRALALLTEAVAEYQADVEIRDYVWTRKAVLPHAPAAKVADFAAKRRLSEAGKPTQGQ
Ga0307477_105206551	3300031753	Hardwood Forest Soil	VALASFDCHDALELLTVSVAEYQADMEVRDYVWTRKVVSPHAPAANVADFAAKRRLSEAGKPTQGQTPLS
Ga0307475_104236731	3300031754	Hardwood Forest Soil	VALASFDCHRALALLAESVAEYQAEVDIRDYVWTRKAVLPHAPAAKIADFAAKRRQSEAVKPQGQTPA
Ga0318557_101769742	3300031795	Soil	QMLNEQLVALASFDCHRALALLAESVAEYQAEVDIRDYVWTRKALLPHAPAAKVADFAAKRRLSEAGKPTPGQNPVA
Ga0307478_105426021	3300031823	Hardwood Forest Soil	DLLVALASFDCHRALELLSGAVAEYQADMEIRDYVWTRKAVLPHAPDAKVADFAAKRRLSEAAKPTQGQNPLS
Ga0310917_110530942	3300031833	Soil	ALGLLTEAVAEYAGEPDIRDYVWTRKAVLPHAPAAKVADFAAKRRISEAGKPPAQGQNPHPLN
Ga0318495_103146091	3300031860	Soil	HHLPWARMQQMLNEQLVALASFDCHRALALLAESVAEYQAEVDIRDYVWTRKAVLPHAPAAKVADFAAKRRQSEATKPQGQSPA
Ga0318536_104309452	3300031893	Soil	HLPWVRMQQLLNELLVALASFDCHRALGLLTEAVAEYAGEPDIRDYVWTRKAVLPHAPAAKVADFAAKRRLSEAGKPPAQGQNPHPLN
Ga0318551_101502901	3300031896	Soil	RAIEHHLPWARMQQMLNEQLVALASFDCHRALALLAESVAEYQAEVDIRDYVWTRKALLPHAPAAKVADFAAKRRLSEAGKPTPGQNPVA
Ga0318520_101677272	3300031897	Soil	LNEQLVALASFDCHRALALLAESVAEYQAEVDIRDYVWTRKAVLPHAPAAKVADFAAKRRQSEATKPQGQTPA
Ga0306921_109806291	3300031912	Soil	IEHHLPWARMQQMLNEQLVALASFDCHRALALLAESVAEYQAEVDIRDYVWTRKAVLPHAPAAKVADFAAKRRQSEATKPQGQSPA
Ga0310910_104571372	3300031946	Soil	ILRAIEHHLPWTRMQQILNEQLVALASFDCHRALALLTESVAEYLAEVDIRDYVWTRKAVLPHAPAAKVADFAAKRRQTEAIKPQGQTPA
Ga0310909_112677672	3300031947	Soil	LRAIEHHLPWTRMQQILNEQLVALASFDCHRALALLTESVAEYLAEVDIRDYVWTRKAVLPHAPAAKVADFAAKRRQTEAIKPQGQTPA
Ga0318530_100871201	3300031959	Soil	PMILRAIEHHLPWTRMQQILNEQLVALASFDCHRALALLTESVAEYLAEVDIRDYVWTRKAVLPHAPAAKVADFAAKRRQTEAIKPQGQTPA
Ga0306922_118677551	3300032001	Soil	HHLPWARMQQILNEQLVALASFDCHRALALLTESVAEYLAEVDIRDYVWTRKAVLPHAPAAKVADFAAKRRQSEATKPQGQTPG
Ga0310911_104468781	3300032035	Soil	MLNEQLVALASFDCHRALALLAESVAEYQAEVDIRDYVWTRKAVLPHAPAAKVADFAAKRRQSEATKPQGQTPG
Ga0306924_124209851	3300032076	Soil	MQLILNEQLVALASFDCHRALSLLTEAVAEYLAEVDIRDYVWTRKAVLPHAPAAKVADFAAKRRLSEAAKPSQGQNPVV
Ga0307471_1000675751	3300032180	Hardwood Forest Soil	VALASFDCHSALELLTMAVAEYQADVEIRDYVWTRKAVLPHAPAAKIADFAAKRRLSEAAKPTQGQTPLA
Ga0307471_1018396621	3300032180	Hardwood Forest Soil	LEHHLPWPRMQEVLNDLLVALASFDCHRALALLTESVAEYQSSPDIRDYVWNRKTVLPHAAGANVADFAAKRRQSELGKPAPGQSPLPS
Ga0307472_1017741222	3300032205	Hardwood Forest Soil	LVALASFDCHSALELLTMAVAEYQADVEIRDYVWTRKAVLPHAPAAKIADFAAKRRLSEAAKPTQGQTPLA
Ga0335079_101948621	3300032783	Soil	ILNELLVALASFDCHRALALLSESVAEYEADVDIRDYVWTRKAVLPHAPAAKVADFAAKRRLQEAAGKPTQGQTPSA
Ga0335079_123812352	3300032783	Soil	MQQILNEQLVALASFDCHRALALLTESVAEYQAEVDIRDYVWMRKAVLPHAPAAKVADFAAKRRQSEAAVKPQGQSPA
Ga0335081_112566211	3300032892	Soil	WPRMQEILNDLLVALASFDCHRALGLLTEAVVEYPSSADIRDYVWARKAVLPHASASNVADFAAKRRQSEVGKPAPGQNPLN
Ga0335081_113648701	3300032892	Soil	QMLNDLLVSLASFDCHRTLALLTEAVAEYSQGQEIRDYVWTRKAVPILASDAKIADFAAKRRSSEGGARPTGHPNPIN
Ga0335081_117677422	3300032892	Soil	FDCHRALALLTESVAEYQWNADIRDHVWARKAVLPHAPASNVADFAAKRRQSEGAKPAPGQNPLN
Ga0335077_104974782	3300033158	Soil	LVALASFDCHRALALLAESVAEYHAERDIRDSVWVRKAVLPHAPAVKVADFAAKRRQSEAGKPAPGQNPLA
Ga0335077_105795402	3300033158	Soil	IEHHIPWQRMQLILNEQLVALASFDCHRAVTVLTESVAEYQAEADIRDYVWTRKAILPHSPAAKVADFAAKRRLSEANKPASGQTPVA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F035453

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences