Metagenome / Metatranscriptome Family F035502

Basic Information
Family ID	F035502
Family Type	Metagenome / Metatranscriptome
Number of Sequences	172
Average Sequence Length	60 residues
Representative Sequence	MTDDAREPRSGRVERRINSARDSLPGERNDLPQGALGGLPPDPQGDENRDPPPNAPTIPS
Number of Associated Samples	113
Number of Associated Scaffolds	172

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	66.87 %
% of genes near scaffold ends (potentially truncated)	35.47 %
% of genes from short scaffolds (< 2000 bps)	90.70 %
Associated GOLD sequencing projects	99
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.19

Most Common Taxonomy
Group	Unclassified (61.047 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (13.372 % of family members)
Environment Ontology (ENVO)	Unclassified (39.535 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (69.186 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 9.09% β-sheet: 0.00% Coil/Unstructured: 90.91%
Feature Viewer

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Pfam ID	Name	% Frequency in 172 Family Scaffolds
PF10685	KGG	31.40
PF03633	Glyco_hydro_65C	15.70
PF00248	Aldo_ket_red	1.74
PF05974	DUF892	1.74
PF00202	Aminotran_3	0.58
PF00239	Resolvase	0.58
PF03636	Glyco_hydro_65N	0.58
PF01266	DAO	0.58
PF07005	SBD_N	0.58
PF11154	DUF2934	0.58
PF13560	HTH_31	0.58
PF00389	2-Hacid_dh	0.58

COG ID	Name	Functional Category	% Frequency in 172 Family Scaffolds
COG1554	Phosphatase/phosphodiesterase/kojibiose phosphorylase YcjT/PafA/Npp1, AlkP superfamily	Carbohydrate transport and metabolism [G]	16.28
COG3685	Ferritin-like metal-binding protein YciE	Inorganic ion transport and metabolism [P]	1.74
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.58
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.58
COG3395	D-threonate/D-erythronate kinase OtnK and related C4-acid sugar kinases, YgbK/DUF1537 family	Carbohydrate transport and metabolism [G]	0.58

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.05 %
All Organisms	root	All Organisms	38.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.05 %
cellular organisms	root	All Organisms → cellular organisms	38.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.05 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	38.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.05 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	29.65 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.58 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.58 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.05 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	23.26 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.58 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.58 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.05 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	15.12 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.16 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.58 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.58 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.05 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	11.63 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.16 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	0.58 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	0.58 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.58 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.05 %
Rhodopila	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	4.07 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.16 %
Gluconacetobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Gluconacetobacter	1.16 %
Rhodospirillales bacterium 69-11	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 69-11	0.58 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.58 %
Roseomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas	0.58 %
Candidatus Sulfotelmatomonas	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas	0.58 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.05 %
Gluconacetobacter aggeris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Gluconacetobacter → Gluconacetobacter aggeris	1.16 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.16 %
Candidatus Sulfotelmatomonas gaucii	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	0.58 %
Rhodopila globiformis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila → Rhodopila globiformis	0.58 %
Rhodospirillales bacterium 69-11	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 69-11	0.58 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.58 %
Roseomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas	0.58 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.58 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002568\|C688J35102_120130980	Not Available	892	Open in IMG/M
3300003562\|Ga0007431J51703_110708	All Organisms → cellular organisms → Bacteria → Proteobacteria	523	Open in IMG/M
3300004091\|Ga0062387_100350384	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	974	Open in IMG/M
3300005328\|Ga0070676_10970193	All Organisms → cellular organisms → Bacteria → Proteobacteria	636	Open in IMG/M
3300005329\|Ga0070683_100886958	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	855	Open in IMG/M
3300005331\|Ga0070670_100370656	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1260	Open in IMG/M
3300005334\|Ga0068869_100924337	Not Available	756	Open in IMG/M
3300005354\|Ga0070675_101064263	Not Available	743	Open in IMG/M
3300005434\|Ga0070709_10269021	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1234	Open in IMG/M
3300005434\|Ga0070709_10582328	Not Available	860	Open in IMG/M
3300005435\|Ga0070714_100117305	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2364	Open in IMG/M
3300005435\|Ga0070714_100881663	All Organisms → cellular organisms → Bacteria → Proteobacteria	868	Open in IMG/M
3300005435\|Ga0070714_102368723	Not Available	516	Open in IMG/M
3300005436\|Ga0070713_100238315	All Organisms → cellular organisms → Bacteria → Proteobacteria	1656	Open in IMG/M
3300005436\|Ga0070713_100282023	Not Available	1524	Open in IMG/M
3300005436\|Ga0070713_100885418	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	858	Open in IMG/M
3300005436\|Ga0070713_100897068	Not Available	852	Open in IMG/M
3300005436\|Ga0070713_100953589	Not Available	826	Open in IMG/M
3300005437\|Ga0070710_10363107	Not Available	961	Open in IMG/M
3300005437\|Ga0070710_10456883	Not Available	867	Open in IMG/M
3300005437\|Ga0070710_10644637	Not Available	742	Open in IMG/M
3300005456\|Ga0070678_100565744	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1011	Open in IMG/M
3300005459\|Ga0068867_100665097	All Organisms → cellular organisms → Bacteria	915	Open in IMG/M
3300005535\|Ga0070684_101040493	Not Available	769	Open in IMG/M
3300005541\|Ga0070733_10203458	All Organisms → cellular organisms → Bacteria → Proteobacteria	1295	Open in IMG/M
3300005541\|Ga0070733_10688982	Not Available	686	Open in IMG/M
3300005543\|Ga0070672_101519081	Not Available	600	Open in IMG/M
3300005578\|Ga0068854_101169942	All Organisms → cellular organisms → Bacteria	688	Open in IMG/M
3300005614\|Ga0068856_100399649	Not Available	1394	Open in IMG/M
3300005614\|Ga0068856_100608819	Not Available	1113	Open in IMG/M
3300005614\|Ga0068856_100748740	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	997	Open in IMG/M
3300005614\|Ga0068856_102441912	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300005764\|Ga0066903_100117754	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	3677	Open in IMG/M
3300005764\|Ga0066903_100547969	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1982	Open in IMG/M
3300005764\|Ga0066903_103807161	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	811	Open in IMG/M
3300005842\|Ga0068858_100993350	All Organisms → cellular organisms → Bacteria	822	Open in IMG/M
3300005842\|Ga0068858_102136995	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas	554	Open in IMG/M
3300005937\|Ga0081455_10475875	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	846	Open in IMG/M
3300006028\|Ga0070717_10275474	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1491	Open in IMG/M
3300006028\|Ga0070717_10379376	Not Available	1267	Open in IMG/M
3300006028\|Ga0070717_10461761	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1145	Open in IMG/M
3300006050\|Ga0075028_100285237	All Organisms → cellular organisms → Bacteria → Proteobacteria	916	Open in IMG/M
3300006162\|Ga0075030_101564735	Not Available	516	Open in IMG/M
3300006163\|Ga0070715_10855987	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300006175\|Ga0070712_100010712	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	5792	Open in IMG/M
3300006175\|Ga0070712_100145661	Not Available	1812	Open in IMG/M
3300006755\|Ga0079222_12263540	Not Available	542	Open in IMG/M
3300006755\|Ga0079222_12289761	Not Available	539	Open in IMG/M
3300006854\|Ga0075425_100706365	Not Available	1158	Open in IMG/M
3300009094\|Ga0111539_11452523	Not Available	795	Open in IMG/M
3300009098\|Ga0105245_10199007	Not Available	1923	Open in IMG/M
3300009101\|Ga0105247_11562198	Not Available	540	Open in IMG/M
3300009101\|Ga0105247_11855474	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300009156\|Ga0111538_11225041	Not Available	948	Open in IMG/M
3300009176\|Ga0105242_10367595	All Organisms → cellular organisms → Bacteria	1333	Open in IMG/M
3300009177\|Ga0105248_10007160	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	12237	Open in IMG/M
3300009177\|Ga0105248_12446376	Not Available	595	Open in IMG/M
3300009545\|Ga0105237_10174011	Not Available	2153	Open in IMG/M
3300009545\|Ga0105237_12219755	Not Available	558	Open in IMG/M
3300009551\|Ga0105238_10750617	Not Available	990	Open in IMG/M
3300009553\|Ga0105249_12304464	Not Available	611	Open in IMG/M
3300009553\|Ga0105249_12827133	Not Available	557	Open in IMG/M
3300010152\|Ga0126318_10095371	Not Available	505	Open in IMG/M
3300010152\|Ga0126318_10414818	All Organisms → cellular organisms → Bacteria → Proteobacteria	577	Open in IMG/M
3300010366\|Ga0126379_11653541	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	745	Open in IMG/M
3300010373\|Ga0134128_10201582	Not Available	2240	Open in IMG/M
3300010373\|Ga0134128_11168488	Not Available	849	Open in IMG/M
3300010373\|Ga0134128_12438838	Not Available	576	Open in IMG/M
3300010376\|Ga0126381_100719280	All Organisms → cellular organisms → Bacteria	1429	Open in IMG/M
3300010376\|Ga0126381_102511977	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	738	Open in IMG/M
3300010396\|Ga0134126_10226422	Not Available	2223	Open in IMG/M
3300010396\|Ga0134126_11256910	Not Available	821	Open in IMG/M
3300010865\|Ga0126346_1049216	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila → Rhodopila globiformis	1029	Open in IMG/M
3300011119\|Ga0105246_11302448	Not Available	673	Open in IMG/M
3300012177\|Ga0153943_1018770	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1598	Open in IMG/M
3300012212\|Ga0150985_100656046	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1547	Open in IMG/M
3300012212\|Ga0150985_102604928	Not Available	581	Open in IMG/M
3300012212\|Ga0150985_107338707	Not Available	541	Open in IMG/M
3300012212\|Ga0150985_108293308	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2404	Open in IMG/M
3300012212\|Ga0150985_109995183	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	2498	Open in IMG/M
3300012212\|Ga0150985_113164911	Not Available	518	Open in IMG/M
3300012212\|Ga0150985_114926209	Not Available	567	Open in IMG/M
3300012212\|Ga0150985_118199343	Not Available	671	Open in IMG/M
3300012469\|Ga0150984_108101310	All Organisms → cellular organisms → Bacteria	1966	Open in IMG/M
3300012469\|Ga0150984_109260026	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Gluconacetobacter → Gluconacetobacter aggeris	801	Open in IMG/M
3300012469\|Ga0150984_112617052	Not Available	633	Open in IMG/M
3300012951\|Ga0164300_10391778	Not Available	760	Open in IMG/M
3300012960\|Ga0164301_11165755	Not Available	617	Open in IMG/M
3300012960\|Ga0164301_11325890	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Gluconacetobacter → Gluconacetobacter aggeris	585	Open in IMG/M
3300012988\|Ga0164306_11877069	Not Available	521	Open in IMG/M
3300013102\|Ga0157371_11163441	Not Available	593	Open in IMG/M
3300013104\|Ga0157370_11450246	Not Available	617	Open in IMG/M
3300013105\|Ga0157369_10327956	All Organisms → cellular organisms → Bacteria	1591	Open in IMG/M
3300013306\|Ga0163162_12371888	Not Available	610	Open in IMG/M
3300013306\|Ga0163162_12741796	Not Available	567	Open in IMG/M
3300013307\|Ga0157372_10985904	Not Available	976	Open in IMG/M
3300014325\|Ga0163163_11046067	Not Available	880	Open in IMG/M
3300014497\|Ga0182008_10072851	Not Available	1690	Open in IMG/M
3300014968\|Ga0157379_10204848	Not Available	1784	Open in IMG/M
3300014969\|Ga0157376_12225396	Not Available	587	Open in IMG/M
3300015265\|Ga0182005_1049594	Not Available	1141	Open in IMG/M
3300015371\|Ga0132258_12294831	Not Available	1353	Open in IMG/M
3300015371\|Ga0132258_13185326	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1132	Open in IMG/M
3300015373\|Ga0132257_101080574	Not Available	1012	Open in IMG/M
3300015374\|Ga0132255_103661766	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	653	Open in IMG/M
3300017792\|Ga0163161_11176860	Not Available	662	Open in IMG/M
3300018476\|Ga0190274_13661875	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	519	Open in IMG/M
3300020069\|Ga0197907_10459142	All Organisms → cellular organisms → Bacteria	708	Open in IMG/M
3300020069\|Ga0197907_11250173	Not Available	842	Open in IMG/M
3300020069\|Ga0197907_11321309	Not Available	617	Open in IMG/M
3300020069\|Ga0197907_11385232	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	1079	Open in IMG/M
3300020070\|Ga0206356_10117961	Not Available	550	Open in IMG/M
3300020075\|Ga0206349_1893531	Not Available	655	Open in IMG/M
3300020080\|Ga0206350_10115795	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	1216	Open in IMG/M
3300020080\|Ga0206350_10430380	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	787	Open in IMG/M
3300020080\|Ga0206350_11224677	Not Available	525	Open in IMG/M
3300020081\|Ga0206354_11458120	Not Available	846	Open in IMG/M
3300020582\|Ga0210395_10169492	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1633	Open in IMG/M
3300020582\|Ga0210395_11225871	Not Available	551	Open in IMG/M
3300021082\|Ga0210380_10452886	Not Available	588	Open in IMG/M
3300021171\|Ga0210405_11086821	Not Available	599	Open in IMG/M
3300021388\|Ga0213875_10249397	Not Available	837	Open in IMG/M
3300021401\|Ga0210393_10740558	Not Available	801	Open in IMG/M
3300021403\|Ga0210397_11039259	Not Available	636	Open in IMG/M
3300021404\|Ga0210389_10703023	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	792	Open in IMG/M
3300021475\|Ga0210392_10263755	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1224	Open in IMG/M
3300021475\|Ga0210392_10625445	Not Available	799	Open in IMG/M
3300021951\|Ga0222624_1226610	Not Available	584	Open in IMG/M
3300022467\|Ga0224712_10286558	Not Available	768	Open in IMG/M
3300025905\|Ga0207685_10516498	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	631	Open in IMG/M
3300025911\|Ga0207654_10549858	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	820	Open in IMG/M
3300025915\|Ga0207693_10204083	All Organisms → cellular organisms → Bacteria → Proteobacteria	1554	Open in IMG/M
3300025915\|Ga0207693_10211598	Not Available	1524	Open in IMG/M
3300025924\|Ga0207694_11189918	Not Available	645	Open in IMG/M
3300025925\|Ga0207650_11812347	Not Available	516	Open in IMG/M
3300025926\|Ga0207659_10895743	Not Available	763	Open in IMG/M
3300025927\|Ga0207687_11644574	Not Available	551	Open in IMG/M
3300025928\|Ga0207700_10093353	All Organisms → cellular organisms → Bacteria → Proteobacteria	2381	Open in IMG/M
3300025928\|Ga0207700_10567480	Not Available	1008	Open in IMG/M
3300025929\|Ga0207664_10561590	All Organisms → cellular organisms → Bacteria → Proteobacteria	1024	Open in IMG/M
3300025937\|Ga0207669_11869679	Not Available	513	Open in IMG/M
3300025940\|Ga0207691_11754875	Not Available	501	Open in IMG/M
3300025944\|Ga0207661_10226069	Not Available	1656	Open in IMG/M
3300025944\|Ga0207661_11574483	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	602	Open in IMG/M
3300025945\|Ga0207679_10404514	Not Available	1201	Open in IMG/M
3300025960\|Ga0207651_11772275	Not Available	556	Open in IMG/M
3300026023\|Ga0207677_11670886	Not Available	590	Open in IMG/M
3300026088\|Ga0207641_11429569	Not Available	693	Open in IMG/M
3300026089\|Ga0207648_12145924	Not Available	519	Open in IMG/M
3300026121\|Ga0207683_10584243	Not Available	1033	Open in IMG/M
3300026121\|Ga0207683_10987178	Not Available	782	Open in IMG/M
3300027894\|Ga0209068_10108974	All Organisms → cellular organisms → Bacteria → Proteobacteria	1469	Open in IMG/M
3300027895\|Ga0209624_10276824	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1117	Open in IMG/M
3300028146\|Ga0247682_1105427	Not Available	527	Open in IMG/M
3300028768\|Ga0307280_10105670	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	940	Open in IMG/M
3300030988\|Ga0308183_1142549	Not Available	583	Open in IMG/M
3300030988\|Ga0308183_1187614	Not Available	531	Open in IMG/M
3300030994\|Ga0308153_103009	Not Available	843	Open in IMG/M
3300031091\|Ga0308201_10136345	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	753	Open in IMG/M
3300031091\|Ga0308201_10196850	Not Available	663	Open in IMG/M
3300031092\|Ga0308204_10326554	Not Available	521	Open in IMG/M
3300031114\|Ga0308187_10181189	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 69-11	725	Open in IMG/M
3300032009\|Ga0318563_10762159	Not Available	519	Open in IMG/M
3300032805\|Ga0335078_11257153	All Organisms → cellular organisms → Bacteria	849	Open in IMG/M
3300032892\|Ga0335081_10349633	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	1927	Open in IMG/M
3300033158\|Ga0335077_10860649	All Organisms → cellular organisms → Bacteria	917	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	56.40%
Host-Associated	Host-Associated	43.60%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	51.74%
Plants	Host-Associated → Plants	43.02%
Aquatic	Environmental → Aquatic	4.65%
Fungi	Host-Associated → Fungi	0.58%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	51.74%
Rhizosphere	Host-Associated → Plants → Rhizosphere	23.26%
Rhizoplane	Host-Associated → Plants → Rhizoplane	18.60%
Freshwater	Environmental → Aquatic → Freshwater	2.91%
Sediment	Environmental → Aquatic → Sediment	1.74%
Roots	Host-Associated → Plants → Roots	1.16%
Mycelium	Host-Associated → Fungi → Mycelium	0.58%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	29.07%
Loam	Environmental → Terrestrial → Soil → Loam	20.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	15.70%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	9.30%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	7.56%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.56%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.74%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.74%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.74%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.16%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.16%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.58%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.58%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.58%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.58%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.09%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	18.02%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	15.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	9.30%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	7.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.56%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.81%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.33%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.74%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.74%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.74%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.16%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.16%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.16%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.58%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.58%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.58%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.58%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.58%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	13.37%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	8.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.56%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	5.23%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.49%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	3.49%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.33%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	2.33%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.33%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.33%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.33%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.91%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.91%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.91%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.91%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.74%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.74%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.74%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.74%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.74%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.74%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.16%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.16%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.16%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.16%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.16%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.58%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.58%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.58%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.58%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.58%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.58%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.58%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.58%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.58%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.58%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.58%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003562	Grassland soil microbial communities from Hopland, California, USA - Sample H4_Bulk_47 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010152	Soil microbial communities from Oklahoma, USA to study soil gas exchange rates - GP-OK-ARM metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010865	Boreal forest soil eukaryotic communities from Alaska, USA - C3-3 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012177	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ027 MetaG	Host-Associated	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015265	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300020069	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020075	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020080	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020081	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021388	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8	Host-Associated	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021951	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022467	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300028146	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK23	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300030988	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_157 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030994	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_142 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031091	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J35102_1201309802	3300002568	Soil	MTQVTKQPRRPGRVERRINSARDSLPGERDDLASGELSGVPTDPQGDENREPPPGALKMPP*
Ga0007431J51703_1107082	3300003562	Avena Fatua Rhizosphere	VTEKPEGQVEQRIKSARDSLPGRRNGLPEGALGRPSAAPQGDENRDPPPNAPTIPE*
Ga0062387_1003503842	3300004091	Bog Forest Soil	MTENDAREPRGGRVERRINSARDSLPGERNDLPEGALGGLPPDPQGDENRDPPPNAPSIPS*
Ga0070676_109701931	3300005328	Miscanthus Rhizosphere	MQNRTRPGRVEQRINDARDSLPGERNDLPEGALGGLPADPQGDENRDPPANAPTPSE*
Ga0070683_1008869582	3300005329	Corn Rhizosphere	MASKSEGQVEQRMNTARDSLPGRRNALPEGTLRPPAEPQGDENRDPPPNAPTIPE*
Ga0070670_1003706562	3300005331	Switchgrass Rhizosphere	MARKSEGQVEQRMNTARDSLPGRRNALPEGTLRPPAEPQGDENRDPPPNAPTIPE*
Ga0068869_1009243371	3300005334	Miscanthus Rhizosphere	AHQEEKIQPRPGRVEHRINTARDSLPGERNGLPAGSLGGLPVDPQADENREPPPNAPIIPE*
Ga0070675_1010642631	3300005354	Miscanthus Rhizosphere	WIMHDRIRPGRVEQRINDARDSLPGERNDLPEGALGGLPADPQGDENRDPPANAPTPSE*
Ga0070709_102690212	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MSDKQSSTSRAKRVERRINSAHDSLPGERNDLPPGALGGLPAEPQGDENRDPPPNAPIIPP*
Ga0070709_105823282	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MHPAMTQVTKQPRRPGRVERRINSARDSLPGERNDLALGELSGVPTDPQGDENREPPPGSPKIPL*
Ga0070714_1001173054	3300005435	Agricultural Soil	MATDKHEGDVEQRINSARDSLPGRRNGLPEGALNRPPVERQGDENRDPPPNAPIIPD*
Ga0070714_1008816631	3300005435	Agricultural Soil	MAEKDTREPRRGRVERRINSARDSLPGERNDLPDGALGGVPAEPQGDENRDPPPNAPIIPP*
Ga0070714_1023687232	3300005435	Agricultural Soil	MTDKPEGQVEQRINSARDSLPGRRNGLPEGALGRPSAQAHGDENRDPPPNAPTIPE*
Ga0070713_1002383151	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	QSSTSRAKRVERRINSAHDSLPGERNDLPPGALGGLPAEPQGDENRDPPPNAPIIPP*
Ga0070713_1002820231	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MTQVTKQPRRPGRVERRINSARDSLPGERDDLASGELSGVPTDPQGDENREPPPGAPKMPP*
Ga0070713_1008854183	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	KQRSGRVERRIKTARESLPGERNDLPEGALGGVPTEPHGDENRDPPPNAPISPP*
Ga0070713_1008970681	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MTDKPEGQVEQRINSARDSLPGRRNGLPEGALGRPSAQAHGDENRDPPPNAPTIPK*
Ga0070713_1009535892	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	EQRINSARDSLPGRRNGLPEGTLGRTPAEPQGDENRDPPPNAPTIPE*
Ga0070710_103631071	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	TKQPRRPGRVERRINSARDSLPGERNDLALGELSGVPTDPQGDENREPPPGSPKIPL*
Ga0070710_104568831	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MHPAMTQVTKQPRRPGRVERRINSARDSLPGERDDLASGELSGVPTDPQGDENREPP
Ga0070710_106446371	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MAQETAKQPRPGMVERRIRVERRINTARDSLPGERDGLPAGSLGGLPVDPQADENREPPPNAPTIPE*
Ga0070710_109380861	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MTDNNGPAATTEQARNGRRVEERIRSAGDSLPGERNGLPEGALGGLPVDPQADENRDPPANAPTPPS*
Ga0070678_1005657441	3300005456	Miscanthus Rhizosphere	RVEQRINDARDSLPGERNDLPEGALGGLPADPQGDENRDPPANAPTPSE*
Ga0068867_1006650972	3300005459	Miscanthus Rhizosphere	VEQRINDARDSLPGERNDLPEGALGGLPADPQGDENRDPPANAPTPSE*
Ga0070684_1010404931	3300005535	Corn Rhizosphere	MHPGRGITLNQGLGAAMTQVTKQPRPGRVERRINSARDSLPGERNDLAQGELSGVPTDPQGDEN
Ga0070733_102034582	3300005541	Surface Soil	MNTTRNKAGRVEERITEARDSLPGERNDLPEGTLPRMPVEPQGDENREPPSNAPTIPA*
Ga0070733_106889821	3300005541	Surface Soil	MNATPNKAARVERRITEARDSLPGERNDLPEGTLPSLPVEPQGDENREPPPN
Ga0070672_1015190812	3300005543	Miscanthus Rhizosphere	PGRVERRINSARDSLPGERNDLAQGELSGVPTDPQGDENREPPPGAPKMPP*
Ga0068854_1011699422	3300005578	Corn Rhizosphere	MHPAMTQVTKQPRRPGRVERRINSARDSLPGERDDLASGELSGVPTDPQGDENREPPPGAPKMPP*
Ga0068856_1003996492	3300005614	Corn Rhizosphere	MTSKSEGQVEQRMNTARDSLPGRRNALPEGTLRPPAEPQGDENRDPPPNAPTIPE*
Ga0068856_1006088191	3300005614	Corn Rhizosphere	QTRWIMQNRTRPGRVEQRINDARDSLPGERNDLPEGALGGLPADPQGDENRDPPANAPTPSE*
Ga0068856_1007487402	3300005614	Corn Rhizosphere	MMIEKDTCEPRRGRVEQRINSARDSLPGERNDLPDGALGGVPAEPQGDENRDPPPNSPIIPP*
Ga0068856_1024419121	3300005614	Corn Rhizosphere	DKPEGQVEQRINSARDSLPGRRDGLPEGALGRSPAGPQGDENRDPPPNAPTIPE*
Ga0066903_1001177545	3300005764	Tropical Forest Soil	MNHDPPREPRSRRVETRINSSRDSLPGQRNSLPAGSLGGLPADPQGDENRDPPRDAPAIPD*
Ga0066903_1005479694	3300005764	Tropical Forest Soil	MVDKNKGKPTPGRVERRIESARDSLPGERNGLPEGALGGMPAEPQGDENRDPPPNAPTIPD*
Ga0066903_1038071613	3300005764	Tropical Forest Soil	MNDKESQPARSRRAQRRISSARDSLPGERNDLPAGTLNNLPADPQGDENREPPPEAPAIPR*
Ga0068858_1009933502	3300005842	Switchgrass Rhizosphere	VTDKPEGQVEQRINSARDSLPGRRDGLPEGALGRSPAGPQGDENRDPPPNAPTIPE*
Ga0068858_1021369951	3300005842	Switchgrass Rhizosphere	IRVERRINTARDSLPGERDGLPAGSLGGLPVDPQADENREPPPNAPTIPE*
Ga0081455_104758752	3300005937	Tabebuia Heterophylla Rhizosphere	MSETERRRSVEERINKARDSLPGLRNGLPPGSLGGVPADPQGDENRDPPENAPTIPE*
Ga0070717_102754743	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MATDKHEGGVEQRINSARDSLPGRRNGLPEGALNRPPVERQGDENRDPPPNAPIIPD*
Ga0070717_103793761	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	AMTQVTKQPRRPGRVERRINSARDSLPGERDDLASGELSGVPTDPQGDENREPPPGAPKMPP*
Ga0070717_104617613	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	LTAKNKLEGQVEQRINSARDSLPGRRNGLPEGTLGRTPAEPQGDENRDPPPNAPTIPE*
Ga0075028_1002852371	3300006050	Watersheds	MTENDARQPSSGRVERRINSARDSLPGERNDLPEGALGGVPPDPQGDENREPPPNAPTIPS*
Ga0075030_1015647352	3300006162	Watersheds	MTENDAREPRGGRVERRINSARDSLPGKRNDLPEGALGGVPPDPQGDENRDPPPNAPTIPS*
Ga0070715_108559872	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MHPAMTQVTKQPRRPGRVERRINSARDSLPGERDDLAPGKLSGVPTDPQGDENREPPPRAPKIPP*
Ga0070712_1000107125	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MSWVAHFAVPRCMMAEKDTREPRRGRVERRINSARDSLPGERNDLPDGALGGVPAEPQGDENRDPPPNAPIIPP*
Ga0070712_1001456613	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MHPAMTQVTKQPRRPGRVERRINSARDSLPGERDDLASGELSGVPTDPQGDENREPPPGAPNMPP*
Ga0079222_122635402	3300006755	Agricultural Soil	VKTIKAAARSLQLDVHVPLCVKELTMTDKPEGRVEQWINSARDSLPGRRNGLPEGALGGPSAQAHGDENRDPPPNAPTIPE*
Ga0079222_122897611	3300006755	Agricultural Soil	MSQRKHEGGVEQRINSARDSLPGRRNDLPDGALSRPPVKRQGDENRDPPPNAPTIPD*
Ga0075425_1007063652	3300006854	Populus Rhizosphere	MHPAMTQVTKQPRRPGRVERRINSARDSLPGERDDLASGELSGVPTDPQGDENREPPPGSPKIPL*
Ga0111539_114525232	3300009094	Populus Rhizosphere	MTLVTKQPRRPGRVERRINSARDSLPGERDDLASGELSGVPTDPQGDENREPPPGAPKMPP*
Ga0105245_101990074	3300009098	Miscanthus Rhizosphere	VERRIRVERRIKTARDSLLGERDGLPAGSLGGLPVDPQADENREPPPNAPTIPE*
Ga0105247_115621981	3300009101	Switchgrass Rhizosphere	MVERRIRVERRINTARDSLPGERDGLPAGSLGGLPVDPQADENREPPPNAPTIPE*
Ga0105247_118554741	3300009101	Switchgrass Rhizosphere	MSDKQSSTSRAKRVERRINSAHDSLPGERNVLPPGALGGLPAEPQGDENRDPPPNAPIIPP*
Ga0111538_112250411	3300009156	Populus Rhizosphere	MHPAMTQVTKQPRRPGRVERRINSARDSLPGERNDLAQGEMSGVPTDPQGDENREP
Ga0105242_103675953	3300009176	Miscanthus Rhizosphere	MSDKQSSTSRAKRVERRINSAHDSRPGERNDLPPGALGGLPAEPQGDENRDPPPNAPIIPP*
Ga0105248_1000716014	3300009177	Switchgrass Rhizosphere	MVQETAKQPRPGRVERRIRVERRIKTARDSLLGERDGLPAGSLGGLPVDPQA
Ga0105248_124463762	3300009177	Switchgrass Rhizosphere	MGAAMTQVMKQPRRPGRVEWRINSARDSLPGERNDLALGELSGVPTDPQGDENREPPPGSPKIPL*
Ga0105237_101740114	3300009545	Corn Rhizosphere	MHPAMTQVTKQPRRPGRVERRINSARDSLPGERNDLAQGELSGVPTDPQGDENREPPPGSPKIPL*
Ga0105237_122197551	3300009545	Corn Rhizosphere	MPQQNERAAKPGRVERRISNARDSLPGERNDLPPGALGGLPRDPQGDENRDPPPNAPTIPE*
Ga0105238_107506171	3300009551	Corn Rhizosphere	MVQETAKQPRPGRVERRIRVERRIKTARDSLLGERDGLPAGSLGGLPVDPQADENREPPPNAPTIPK*
Ga0105249_123044642	3300009553	Switchgrass Rhizosphere	MAHQEEKIQPRPGRVEHRINTARDSLPGERNGLPAGSLGGLPVDPQADENREPPPNAPTIPK*
Ga0105249_128271332	3300009553	Switchgrass Rhizosphere	MAQEKVIQPRRGRVEQRINTARDSLPGERNALPAGSLGGLPTEPQADENRDPPPNAPTIPE*
Ga0126318_100953712	3300010152	Soil	LDKPTGKPTGKPTGKPKGRVEETINSARDSLPGRRNSLAEGALGRLPAQPQADENRDPPANAPTIPK*
Ga0126318_104148182	3300010152	Soil	MATDKHEGEVEQRINSARDSLPGRRNGLPEGALNRPPVERQGDENRDPPPNAPIIPD*
Ga0126379_116535412	3300010366	Tropical Forest Soil	METMMSDENARKARRGRVEQRIQNSRDSLPGERNDLPPGSLGGVSPEPQGDENRDPPANAPIIPQ*
Ga0134128_102015822	3300010373	Terrestrial Soil	IILNQGLGAAMTQMTKQPRRPGRVERRINSARDSLPGERNDLALGELSGVPTDPQGDENREPPPGSPKIPL*
Ga0134128_111684881	3300010373	Terrestrial Soil	MHPAMTQVTKQPRRPGRVERRINSARDSLPGERDDLASGELSGVPTDPQGDENREPPPGAPEIPP*
Ga0134128_124388381	3300010373	Terrestrial Soil	ERRINSAHDSLPGERNDLPPGALGGLPAEPQGDENRDPPPNAPIIPP*
Ga0126381_1007192803	3300010376	Tropical Forest Soil	MNHDLPREPRSRRVETRINSSRDSLPGQRNSLPAGSLGGLPADPQGDENRDPPRDAPAIPD*
Ga0126381_1025119771	3300010376	Tropical Forest Soil	METMMSDDNARKVRRGRVEQRIQNSRDSLPGERNDLPAGSLGGVLPEPQGDENRDPPANAPTIPQ*
Ga0134126_102264223	3300010396	Terrestrial Soil	MHPAMTQVTKQPRRPGRVERRIKSARDSLPGERNDLALGELSGVPTDPQGDENREPPPGSPKIPL*
Ga0134126_112569102	3300010396	Terrestrial Soil	VEQRIETSRDSLPGKRDGLPPEALGGLPAEPQGDENRPPPPQAPTISE*
Ga0126346_10492161	3300010865	Boreal Forest Soil	NDQTHPVPPARRPGRVDQRIGNARDSLPGERNDLPEGALGGVPVEPDEHRPPTPNAPSIPS*
Ga0105246_113024481	3300011119	Miscanthus Rhizosphere	AAMTQVTKQPRRPGRVERRINSARDSLPGERNDLALGELSGVPTDPQGDENREPPPGSPKIPL*
Ga0153943_10187704	3300012177	Attine Ant Fungus Gardens	MNATPNKAARVERRITEARDSLPGERNDLPEGTLPSLPVEPQGDENREPPPNAPTIPP*
Ga0150985_1006560463	3300012212	Avena Fatua Rhizosphere	MATETPKPRPGRVEARINSARDSLPGERASLPEGALDRLPPDPQGDENRDPPPNAPTIPA
Ga0150985_1026049282	3300012212	Avena Fatua Rhizosphere	IRRGRVEQRINSARDSLPGERNDLPEGALGGLPPEPQGDENREPPANAPTIPP*
Ga0150985_1073387071	3300012212	Avena Fatua Rhizosphere	MTQETKQPRRPGRVERRINSARDSLPGERDDLAPGELSGVPIDPQGDENREPPPRAPKIPP*
Ga0150985_1082933085	3300012212	Avena Fatua Rhizosphere	MPDDAARGRVEQRINTARDSLPGQRNGLPEGALGGLPPDPQGDENRDPPSNAPAIPQ*
Ga0150985_1099951832	3300012212	Avena Fatua Rhizosphere	VEHRINDARDSLPGERNDLPEGALGGLPADPQGDENRDPPANAPTPSE*
Ga0150985_1131649112	3300012212	Avena Fatua Rhizosphere	MTQNDQPPVAPPARRGQVEQRINTARDSLPGQRNGLPEGSLGKLPVEPQGDENRDPPGNAPTIPP*
Ga0150985_1149262091	3300012212	Avena Fatua Rhizosphere	MTDKDTQKHRSGRVEQRINSAHDSLPGERNDLPEGALRGVPTNPQGDENREPPPNAPIIPS*
Ga0150985_1181993431	3300012212	Avena Fatua Rhizosphere	MDSQNEAEDQKRARKRRVEQRIHGTQDSLPGERNDLPEGALGGLPPDPQGDENREPPETAPAIPS*
Ga0150984_1081013102	3300012469	Avena Fatua Rhizosphere	MTQVTKQPRRPGRVEQRIISARDSLPGERDDLASGELSGVPTDPQGDENREPPPGALKMPP*
Ga0150984_1092600262	3300012469	Avena Fatua Rhizosphere	MMNKNDTPQPAAGRVERRIKEARDSLPGMRDGLPEGALGDLPPATQGDENREPPPNAPTIPS*
Ga0150984_1126170522	3300012469	Avena Fatua Rhizosphere	VEQRIADARDSLPGERNDLPEGALGGLPADPQADENREPPANAPAIPQ*
Ga0164300_103917782	3300012951	Soil	MHPAMTPVTKQPRRPGRVERRIISARDRLPGERNDLAQGELAGVPTDPQGDENREPPPGAPKMPP*
Ga0164301_111657552	3300012960	Soil	MREKDTREPRRGRVEQRINSARDSLPGERNDLPDGALGGVPAEPQGDENRDPPPNAPIIPP*
Ga0164301_113258901	3300012960	Soil	MTDKDTQKQRSGRVERRIKTARDSLPGERNDLPEGALGGVPTEPQGDENRDPPPNAPISST*
Ga0164306_118770691	3300012988	Soil	QEAEAMSDKQSSTSRAKRVERRINSAHDSLPGERNDLPPGALGGLPAEPQGDENRDPPPNAPIIPP*
Ga0157371_111634411	3300013102	Corn Rhizosphere	TMTQVTKQPRPGRVERRINSARDSLPGERNDLALGELSGVPTDPQGDENREPPPGSPKIPL*
Ga0157370_114502462	3300013104	Corn Rhizosphere	MHPAMTQVTKQPRRPGRVERRINSARDSLPGERNDLALGELSGVPTDPQGDENREPPPGAPKMPP*
Ga0157369_103279561	3300013105	Corn Rhizosphere	MHPAMTQVTKQPRRPGRVERRINSARDSLPGERNDLAQGELSGVPTDPQGDENREPPPGAPKMPP
Ga0157369_105394963	3300013105	Corn Rhizosphere	MTDNNGPAATTEQARNGRRVEERIRSAGDSLPGERNGLPEGALGGLPVDPQADENRDPPANAPTLPA*
Ga0163162_123718881	3300013306	Switchgrass Rhizosphere	PAAGWPTSQEAEAMSDKQSSTSRAKRVERRINSAHDSLPGERNDLPPGALGGLPAEPQGDENRDPPPNAPIIPP*
Ga0163162_127417961	3300013306	Switchgrass Rhizosphere	VERRINSARDSLPGERDDLASGELSGVPTDPQGDENREPPPGAPKMP
Ga0157372_109859041	3300013307	Corn Rhizosphere	VERRIRVERRIKTARDSLLGERDGLPAGSLGGLRVDPRADENREPPPNAPTNPE*
Ga0163163_110460672	3300014325	Switchgrass Rhizosphere	MMPQQNERAAKPGRVERRISNARDSLPGERNDLPPGALGGLPRDPQGDENRDPPPNAPTIPE*
Ga0182008_100728511	3300014497	Rhizosphere	VPLCMKELTMTDKPEGRVEQWINSARDSLPGRRNGLPEGALGGPSAQAHGDENRDPPPNAPTIPE*
Ga0157379_102048482	3300014968	Switchgrass Rhizosphere	MTQVTKQPRRPGRVERRINSARDSLPGERNDLALGELSGVPTDPQGDENREPPPGSPKIPL*
Ga0157376_122253962	3300014969	Miscanthus Rhizosphere	WIMQNRTRPGRVEQRINDARDSLPGERNDLPEGALGGLPADPQGDENRDPPANAPTPSE*
Ga0182005_10495941	3300015265	Rhizosphere	MTQVTKQPRPGRVERRINSARDSLPGERDDLASGELSGVPTDPQGDENREPPPGAPKMPP
Ga0132258_122948313	3300015371	Arabidopsis Rhizosphere	MMPQQNERPVNPGRVEQRISNARDSLPGERNGLPPGSLGGLPQDPQGDENRDPPPNAPSIPK*
Ga0132258_131853263	3300015371	Arabidopsis Rhizosphere	MAQEEKIHPRPGRVEHRINTARDSLPGERNALPAGSLGGLPVDPQADENREPPPDAPTIPE*
Ga0132257_1010805741	3300015373	Arabidopsis Rhizosphere	MTQVTKQPRPGRVERRINSARDSLPGERNDLALGELSGVPTDPQGDENREPPPGAPKMPP
Ga0132255_1036617661	3300015374	Arabidopsis Rhizosphere	MAQEEKIHPRPGRVEHRINTARDSLPGERNGLPAGSLGGLPVDPQADENREPPPDAPTIPE*
Ga0163161_111768602	3300017792	Switchgrass Rhizosphere	MHPAMTQVTKQPRRPGRVERRINSARDSLPGERNDLALGELSGVPTDPQGDENREPPPGSPKIPL
Ga0190274_136618751	3300018476	Soil	MTDSTNSPEARRSRVERRIGQARDSLPGERNDLPQGTLPDIPAQPQGDENREPPANAPAIPRSPGA
Ga0197907_100145712	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	MTDNNGPAATTEQARNGRRVEERIRSAGDSLPGERNGLPEGALGGLPVDPQADENRDPPANAPTPPP
Ga0197907_104591422	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	MSDKQSSTSRAKRVERRINSAHDSLPGERNDLPPGALGGLPAEPQGDENRDPPPNAPIIP
Ga0197907_112501731	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	MTQVTKQPRPGRVERRINSARDSLPGERNDLALGELSGVPTDPQGDENREPPPGSPKIP
Ga0197907_113213091	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	MDDRRIVPPPAGRRRVERRIDTARDSLPGERNGLPEGALGGVPVDPQGDENRDPPANAPTIPD
Ga0197907_113852322	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	MTSKSEGQVEQRMNTARDSLPGRRNALPEGTLRPPAEPQGDENRDPPPNAPTIPE
Ga0206356_101179612	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	MNKNDTRQPAAGRVERRINEARDSLPGMRDGLPEGALGDLPQAPQGDENREPPPNAPTIP
Ga0206356_108735472	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	MTDNNGPAATTEQARNGRRVEERIRSAGDSLPGERNGLPEGALGGLPVDPQADENRDPPANAPTLPA
Ga0206349_18935311	3300020075	Corn, Switchgrass And Miscanthus Rhizosphere	MEDRRIVPPPAGRRRVEQRIDTARDSLPGERNGLPEGALGGVPVDPQGDENRDPPANAPTIPD
Ga0206350_101157953	3300020080	Corn, Switchgrass And Miscanthus Rhizosphere	MAEKDGREPRRGRVERRINSARDSLPGERNDLPDGALGGVPADPQGDENRDAPPNAPIIP
Ga0206350_104303802	3300020080	Corn, Switchgrass And Miscanthus Rhizosphere	MQNRTRPGRVEQRINDARDSLPGERNDLPVGALGGLPADPQGDENRDPPANAPTPSE
Ga0206350_112246772	3300020080	Corn, Switchgrass And Miscanthus Rhizosphere	MEDRRIVPPPAGRRRVEQRIDTARDSLPRERNGLPEGALGGVPVDPQGDENRDPPANAPTIP
Ga0206354_114581202	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	MTQVTKQPRRPGRVERRINSARDSLPGERNDLALGELSGVPTDPQGDENREPPPGSPRFRCDRWTAPEN
Ga0210395_101694922	3300020582	Soil	MTENDAREPRGGRVERRINSARDSLPGERNDLPEGALGGLPPDPQGDENRDPPPNAPSIP
Ga0210395_112258712	3300020582	Soil	MTDDAREPRSGRVERRINPARDSLPGERNDLPQGALGGLPPDPQGDENRDPPPNAPTIPS
Ga0210380_104528861	3300021082	Groundwater Sediment	MTGKDEPKHRSGRVERRISAARDSLPGARNDLREGALGGRAAEPRSDEDRDPPRNAPIIPPWPIIPP
Ga0210405_110868212	3300021171	Soil	LVRCEMTENDAREPRGGRVERRINSARDSLPGERNDLPEGALGGLPPDPQGDENRDPPPNAPSIPS
Ga0213875_102493973	3300021388	Plant Roots	RTGRTSRLAERVKSSGNALPGRRNDLPQGSLGGLPPEPQGDENREPPADAPTIPP
Ga0210393_107405582	3300021401	Soil	MTDDAREPRSGRVERRINSARDSLPGERNDLPQGALGGLPPDPQGDENRDPPPNAPTIPS
Ga0210397_110392592	3300021403	Soil	KRRINSARDSLPGERNDLPQGALGGLPPDPQGDENRDPPPNAPTIPS
Ga0210389_107030232	3300021404	Soil	MKSNDQTHPVPPARRPGRVEQRIGNARDSLPGERNDLPEGALGGVPVEPDEHRPSPNAPSIPS
Ga0210392_102637551	3300021475	Soil	MSNEQPPPVSPTRQPGHVEQRISNARDSLPGERNDLPEGALGGVPVEPQADEN
Ga0210392_106254452	3300021475	Soil	KGGQIEERIRSARDSLPGRRDGLPKGALGGPPTDPQGDENREPPAGAPIIPR
Ga0222624_12266102	3300021951	Groundwater Sediment	MQNRTRPGRVEQRINDARDSLPGERNDLPEGALGGLPADPQGDENRDPPANAPTPSE
Ga0224712_100174892	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	MTDNNGPAATTEQARNGRRVEERIRSAGDSLPGERNGLPEGALGGLPVDPQADENRDPPANAPTAPP
Ga0224712_102865581	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	MDDRRIVPPPAGRRRVEQRIDTARDSLPGERNGLPEGALGGVPVDPQGDENRDPPANAPTIPE
Ga0207692_109410501	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	VERRINSARDSLPGERDDLASGELSGVPTDPQGDENREPPPGAPNMPP
Ga0207685_105164982	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	AKRVERRINSAHDSLPGERNDLPPGALGGLPAEPQGDENRDPPPNAPIIPP
Ga0207654_105498583	3300025911	Corn Rhizosphere	MVQETAKQPRPGRVERRIRVERRIKTARDSLLGERDGLPAGSLGGLPVDPQADENR
Ga0207693_102040833	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MATDKHEGDVEQRINSARDSLPGRRNGLPEGALNRPPVERQGDENRDPPPNAPIIPD
Ga0207693_102115982	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MHPAMTQVTKQPRRPGRVERRINSARDSLPGERDDLASGELSGVPTDPQGDENREPPPGAPNMPP
Ga0207694_111899182	3300025924	Corn Rhizosphere	RAPPAQPRRPGRVERRINSARDSLPGERNDLALGELSGVPTDPQGDENREPPPGSPKIPL
Ga0207650_118123472	3300025925	Switchgrass Rhizosphere	MTQVTKQPRPGRVERRINSARDSLPGERNDLAQGELSGVPTDPQGDENREPPPGAPKMPP
Ga0207659_108957431	3300025926	Miscanthus Rhizosphere	GPAPLGGDAMHEKPRPGRVEQRINTARDSLPGERNDLPEGALGGLPADPQGDENRDPPANAPTPSE
Ga0207687_116445742	3300025927	Miscanthus Rhizosphere	EAEAMSDKQSSTSRAKRVERRINSAHDSLPGERNDLPPGALGGLPAEPQGDENRDPPPNAPIIPP
Ga0207700_100933534	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MSWVAHFAVPRCMMAEKDTREPRRGRVERRINSARDSLPGERNDLPDGAFGGVPAEPQGDENRDPPPNVPIIPP
Ga0207700_105674801	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	EQRINSARDSLPGRRNGLPEGTLGRTPAEPQGDENRDPPPNAPTIPE
Ga0207664_105615902	3300025929	Agricultural Soil	MAEKDTREPRRGRVERRINSARDSLPGERNDLPDGALGGVPAEPQGDENRDPPPNAPIIP
Ga0207669_118696792	3300025937	Miscanthus Rhizosphere	VEQRINDARDSLPGERNDLPEGALGGLPADPQGDENRDPPANAPTPSE
Ga0207691_117548751	3300025940	Miscanthus Rhizosphere	QRRVEHRINTARDSLPGERNGLPAGSLGGLPVDPQADENREPPQNAPTIPK
Ga0207661_102260692	3300025944	Corn Rhizosphere	MTQVTKQPRPGRVERRINSARDSLPGERNDLAQGELSGVPTDPQGDENREPPPGSPKIPL
Ga0207661_115744831	3300025944	Corn Rhizosphere	MAQEEKIHPRPGRVEHRINTARDSLPGERNGLPAGSLSGLPVDPQADENREPPPNAPTIP
Ga0207679_104045142	3300025945	Corn Rhizosphere	MTQVTKQPRPGRVERRINSARDSLPGERNDLAQGKLSGVPTDPQGDENREPPPGAPKMPP
Ga0207651_117722751	3300025960	Switchgrass Rhizosphere	GRVERRIRVERRIKTARDSLLGERDGLPAGSLGGLPVDPQADENREPPPNAPTIPE
Ga0207677_116708862	3300026023	Miscanthus Rhizosphere	MTQVTKQPRPGRVERRINSARDSLPGERNDLAQGELSGVPTDPQGDENREPPPGAPKMP
Ga0207641_114295691	3300026088	Switchgrass Rhizosphere	LIANGPPGCRAGWPTSQEAEAMSDKQSSTSRAKRVERRINSAHDSLPGERNDLPPGALGGLPAEPQGDENRDPPPNAPIIPP
Ga0207648_121459243	3300026089	Miscanthus Rhizosphere	MTQVTKQPRRPGRVERRINSARDSLPGERDDLASGELSGVPTDPQGDENREPPPGALKMP
Ga0207683_105842433	3300026121	Miscanthus Rhizosphere	RVEQRINDARDSLPGERNDLPEGALGGLPADPQGDENRDPPANAPTPSE
Ga0207683_109871781	3300026121	Miscanthus Rhizosphere	MAHQEEKIQPRPGRVEHRINTARDSLPGERNGLPAGSLGGLPVDPQADENREPPPNAPTI
Ga0209068_101089743	3300027894	Watersheds	MTENDARQPSSGRVERRINSARDSLPGERNDLPEGALGGVPPDPQGDENREPPPNAPTIP
Ga0209624_102768242	3300027895	Forest Soil	MTENDAREPRGGRVERRINSARNSLPGERNDLPEGALGGLPPDPQGDENRDPPPNAPSIP
Ga0247682_11054272	3300028146	Soil	PAPPTRRPGRVEQRIGNPHDSLLGERDDLPEGALGGVPVDPQGDENRPPPNAPSIPS
Ga0307280_101056702	3300028768	Soil	MTDKDTQKQRSGRVERRIKTARDSLPGERNDLPEGALGGVPTEPQGDENRDPPPNAPISS
Ga0308183_11425491	3300030988	Soil	GAAMTQVTKQPRRPGRVERRINSARDSLPGERDDLASGELSGVPTDPQGDENREPPPGAPKMPP
Ga0308183_11876141	3300030988	Soil	GAAMTQVTKQPRRPGRVERRINSARDSLPGERDDLASGELSGVPTDPQGDENREPPPGALKMPP
Ga0308153_1030092	3300030994	Soil	MTQVTKQPRRPGRVERRINSARDSLPGERDDLASGELSGVPTDPQGDENREPPPGAPKMP
Ga0308201_101363452	3300031091	Soil	VTDKDTKRYRSGRVELWINTVRDNLPGERNDLPEGALGGVPTEPRGDEHRDPPRYASIIP
Ga0308201_101968501	3300031091	Soil	LTSPDETKLPAGSVEERVKTSRDSLPGQRDALPEGALGGVPAEPQGDENRSPPANAPTIP
Ga0308204_103265542	3300031092	Soil	VEQRINDARDSLPGERNDLPEGALGGLPADPRGDENRDPPANAPTPPE
Ga0308187_101811891	3300031114	Soil	MTDKDSQKHRSSRVERRINTTRDSLPGERDDLPEGALGGVPTEPQGDENRDPPTNAPIIP
Ga0318563_107621592	3300032009	Soil	MADDRRREPKRNRVEQRINSAPDSLPGERNDLPEGTLGGVPPEPQGDENRDPPPNAPIIP
Ga0335078_112571532	3300032805	Soil	MPEDNNNEMRNKRRPGRVRQRAGFARDSLPGERNDLPEGALGRLPVDPQGDENRDPPPNAPTIPP
Ga0335081_103496333	3300032892	Soil	MADIDKREPKRGRVERRINSARDSLPGERNGLPEGALGGLPADPQGDENRDPPANAPTIP
Ga0335077_108606492	3300033158	Soil	MSDSNRDNKQKRRRRRVEQRIGSARDSLPGERNDLPEGALNRQPVDRQGDENRDPPPNAPIIRP

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.19
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.19
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F035502

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


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