Metagenome Family F035504

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F035504
Family Type	Metagenome
Number of Sequences	172
Average Sequence Length	63 residues
Representative Sequence	MLPEDLPFRVIRVNSEDEVLARANNLIVGRAAYETAVRLYPRDTIQYRDGARIIARSEPKPS
Number of Associated Samples	83
Number of Associated Scaffolds	172

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	76.61 %
% of genes near scaffold ends (potentially truncated)	19.77 %
% of genes from short scaffolds (< 2000 bps)	82.56 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.64

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (65.116 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (27.907 % of family members)
Environment Ontology (ENVO)	Unclassified (50.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (62.791 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 18.89% β-sheet: 21.11% Coil/Unstructured: 60.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.64
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.64
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 172 Family Scaffolds
PF14337	Abi_alpha	1.74
PF00871	Acetate_kinase	1.74
PF04471	Mrr_cat	1.16
PF10137	TIR-like	1.16
PF13676	TIR_2	1.16
PF13356	Arm-DNA-bind_3	0.58
PF03401	TctC	0.58
PF12831	FAD_oxidored	0.58
PF00501	AMP-binding	0.58
PF03449	GreA_GreB_N	0.58
PF01979	Amidohydro_1	0.58
PF06736	TMEM175	0.58
PF03050	DDE_Tnp_IS66	0.58
PF04168	Alpha-E	0.58
PF00117	GATase	0.58
PF07896	DUF1674	0.58
PF05147	LANC_like	0.58
PF08327	AHSA1	0.58
PF00005	ABC_tran	0.58
PF14345	GDYXXLXY	0.58
PF02445	NadA	0.58
PF00239	Resolvase	0.58
PF04909	Amidohydro_2	0.58
PF07494	Reg_prop	0.58
PF13358	DDE_3	0.58
PF12762	DDE_Tnp_IS1595	0.58
PF09939	DUF2171	0.58
PF00467	KOW	0.58
PF07883	Cupin_2	0.58
PF05973	Gp49	0.58
PF07927	HicA_toxin	0.58

COG ID	Name	Functional Category	% Frequency in 172 Family Scaffolds
COG0282	Acetate kinase	Energy production and conversion [C]	1.74
COG3426	Butyrate kinase	Energy production and conversion [C]	1.74
COG0379	Quinolinate synthase	Coenzyme transport and metabolism [H]	0.58
COG0782	Transcription elongation factor, GreA/GreB family	Transcription [K]	0.58
COG1724	Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family	General function prediction only [R]	0.58
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.58
COG2307	Uncharacterized conserved protein, Alpha-E superfamily	Function unknown [S]	0.58
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.58
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.58
COG3292	Periplasmic ligand-binding sensor domain	Signal transduction mechanisms [T]	0.58
COG3436	Transposase	Mobilome: prophages, transposons [X]	0.58
COG3548	Uncharacterized membrane protein	Function unknown [S]	0.58
COG3657	Putative component of the toxin-antitoxin plasmid stabilization module	Defense mechanisms [V]	0.58
COG4403	Lantibiotic modifying enzyme	Defense mechanisms [V]	0.58
COG4679	Phage-related protein gp49, toxin component of the Tad-Ata toxin-antitoxin system	Defense mechanisms [V]	0.58
COG5508	Uncharacterized conserved protein, DUF1674 domain	Function unknown [S]	0.58

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.12 %
All Organisms	root	All Organisms	34.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.12 %
cellular organisms	root	All Organisms → cellular organisms	34.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.12 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	34.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.12 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	27.91 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.16 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.12 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	18.60 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	1.16 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.16 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.16 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.12 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	15.70 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1.16 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.16 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.16 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.58 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.58 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.12 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	9.88 %
Desulfuromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales	1.16 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1.16 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.58 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.58 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.58 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	0.58 %
unclassified Verrucomicrobiae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → unclassified Verrucomicrobiae	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.12 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	7.56 %
Geobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae	1.16 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1.16 %
Verrucomicrobiae bacterium AMD-G2	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → unclassified Verrucomicrobiae → Verrucomicrobiae bacterium AMD-G2	0.58 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.58 %
unclassified Rhodospirillaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae	0.58 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	0.58 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.58 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.12 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	4.07 %
Geobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter	1.16 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1.16 %
unclassified Gemmatimonadaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae	0.58 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	0.58 %
Bradyrhizobium aeschynomenes	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium aeschynomenes	0.58 %
Bradyrhizobium zhanjiangense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium zhanjiangense	0.58 %
Bradyrhizobium manausense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium manausense	0.58 %
Methylobacterium aquaticum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → Methylobacterium aquaticum	0.58 %
Verrucomicrobiae bacterium AMD-G2	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → unclassified Verrucomicrobiae → Verrucomicrobiae bacterium AMD-G2	0.58 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.58 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.12 %
Bradyrhizobium sp. CB3035	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CB3035	3.49 %
unclassified Geobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter → unclassified Geobacter	1.16 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1.16 %
Gemmatimonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	0.58 %
Bradyrhizobium sp. CB1024	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CB1024	0.58 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	0.58 %
Bradyrhizobium aeschynomenes	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium aeschynomenes	0.58 %
Bradyrhizobium zhanjiangense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium zhanjiangense	0.58 %
Bradyrhizobium manausense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium manausense	0.58 %
Methylobacterium aquaticum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → Methylobacterium aquaticum	0.58 %
Verrucomicrobiae bacterium AMD-G2	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → unclassified Verrucomicrobiae → Verrucomicrobiae bacterium AMD-G2	0.58 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.58 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.12 %
Bradyrhizobium sp. CB3035	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CB3035	3.49 %
Geobacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter → unclassified Geobacter → Geobacter sp.	1.16 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1.16 %
Gemmatimonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	0.58 %
Bradyrhizobium sp. CB1024	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CB1024	0.58 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	0.58 %
Bradyrhizobium aeschynomenes	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium aeschynomenes	0.58 %
Bradyrhizobium zhanjiangense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium zhanjiangense	0.58 %
Bradyrhizobium manausense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium manausense	0.58 %
Methylobacterium aquaticum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → Methylobacterium aquaticum	0.58 %
Verrucomicrobiae bacterium AMD-G2	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → unclassified Verrucomicrobiae → Verrucomicrobiae bacterium AMD-G2	0.58 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.58 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.58 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002906\|JGI25614J43888_10125047	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium manausense	673	Open in IMG/M
3300002914\|JGI25617J43924_10045971	All Organisms → cellular organisms → Bacteria	1582	Open in IMG/M
3300005332\|Ga0066388_100818073	Not Available	1522	Open in IMG/M
3300005332\|Ga0066388_102178659	All Organisms → cellular organisms → Bacteria	999	Open in IMG/M
3300005332\|Ga0066388_102183172	Not Available	999	Open in IMG/M
3300005332\|Ga0066388_102330215	Not Available	969	Open in IMG/M
3300005332\|Ga0066388_102406364	Not Available	955	Open in IMG/M
3300005332\|Ga0066388_102898281	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	877	Open in IMG/M
3300005332\|Ga0066388_104173703	Not Available	736	Open in IMG/M
3300005332\|Ga0066388_104510137	Not Available	709	Open in IMG/M
3300005332\|Ga0066388_105330429	Not Available	652	Open in IMG/M
3300005332\|Ga0066388_105992832	Not Available	614	Open in IMG/M
3300005439\|Ga0070711_101343683	Not Available	621	Open in IMG/M
3300005439\|Ga0070711_101494010	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	589	Open in IMG/M
3300005533\|Ga0070734_10044644	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	2720	Open in IMG/M
3300005533\|Ga0070734_10116263	Not Available	1564	Open in IMG/M
3300005533\|Ga0070734_10142921	All Organisms → cellular organisms → Bacteria → Proteobacteria	1391	Open in IMG/M
3300005764\|Ga0066903_100020530	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7014	Open in IMG/M
3300005764\|Ga0066903_100093702	All Organisms → cellular organisms → Bacteria → Proteobacteria	4010	Open in IMG/M
3300005764\|Ga0066903_100151519	Not Available	3333	Open in IMG/M
3300005764\|Ga0066903_100210400	All Organisms → cellular organisms → Bacteria → Proteobacteria	2928	Open in IMG/M
3300005764\|Ga0066903_100532965	Not Available	2005	Open in IMG/M
3300005764\|Ga0066903_101153929	Not Available	1434	Open in IMG/M
3300005764\|Ga0066903_102184112	Not Available	1067	Open in IMG/M
3300005764\|Ga0066903_102601134	Not Available	981	Open in IMG/M
3300005764\|Ga0066903_103519748	Not Available	844	Open in IMG/M
3300005764\|Ga0066903_103840567	Not Available	807	Open in IMG/M
3300005764\|Ga0066903_104251573	All Organisms → cellular organisms → Bacteria	766	Open in IMG/M
3300005764\|Ga0066903_104767784	All Organisms → cellular organisms → Bacteria → Proteobacteria	721	Open in IMG/M
3300005764\|Ga0066903_108176690	Not Available	535	Open in IMG/M
3300006050\|Ga0075028_100979920	Not Available	525	Open in IMG/M
3300006163\|Ga0070715_10707702	Not Available	602	Open in IMG/M
3300006177\|Ga0075362_10133739	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1181	Open in IMG/M
3300006354\|Ga0075021_10798546	Not Available	610	Open in IMG/M
3300007255\|Ga0099791_10216315	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CB3035	905	Open in IMG/M
3300007258\|Ga0099793_10092505	Not Available	1391	Open in IMG/M
3300007258\|Ga0099793_10575890	Not Available	563	Open in IMG/M
3300007265\|Ga0099794_10213153	Not Available	991	Open in IMG/M
3300007788\|Ga0099795_10094411	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter → unclassified Geobacter → Geobacter sp.	1164	Open in IMG/M
3300009038\|Ga0099829_10235090	Not Available	1491	Open in IMG/M
3300009038\|Ga0099829_10591594	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CB3035	922	Open in IMG/M
3300009088\|Ga0099830_10957455	Not Available	708	Open in IMG/M
3300009090\|Ga0099827_11523902	Not Available	582	Open in IMG/M
3300009100\|Ga0075418_11464279	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	741	Open in IMG/M
3300009143\|Ga0099792_10013269	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium aeschynomenes	3523	Open in IMG/M
3300009143\|Ga0099792_10493190	Not Available	766	Open in IMG/M
3300009143\|Ga0099792_10636970	Not Available	683	Open in IMG/M
3300009792\|Ga0126374_10007936	All Organisms → cellular organisms → Bacteria → Proteobacteria	3971	Open in IMG/M
3300009792\|Ga0126374_10299144	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1078	Open in IMG/M
3300009792\|Ga0126374_10413480	Not Available	947	Open in IMG/M
3300009792\|Ga0126374_11784475	Not Available	514	Open in IMG/M
3300009826\|Ga0123355_11249576	Not Available	752	Open in IMG/M
3300009826\|Ga0123355_11627674	Not Available	620	Open in IMG/M
3300010043\|Ga0126380_10043557	Not Available	2374	Open in IMG/M
3300010043\|Ga0126380_11597355	Not Available	582	Open in IMG/M
3300010046\|Ga0126384_10287566	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter → unclassified Geobacter → Geobacter sp.	1346	Open in IMG/M
3300010046\|Ga0126384_10645420	Not Available	932	Open in IMG/M
3300010048\|Ga0126373_11634257	Not Available	709	Open in IMG/M
3300010049\|Ga0123356_10256447	Not Available	1830	Open in IMG/M
3300010159\|Ga0099796_10015077	All Organisms → cellular organisms → Bacteria → Proteobacteria	2250	Open in IMG/M
3300010358\|Ga0126370_10196688	Not Available	1519	Open in IMG/M
3300010358\|Ga0126370_10608792	Not Available	944	Open in IMG/M
3300010358\|Ga0126370_10955029	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → Methylobacterium aquaticum	779	Open in IMG/M
3300010358\|Ga0126370_11104374	Not Available	731	Open in IMG/M
3300010358\|Ga0126370_11175852	Not Available	712	Open in IMG/M
3300010358\|Ga0126370_12495844	Not Available	515	Open in IMG/M
3300010359\|Ga0126376_10030746	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CB1024	3626	Open in IMG/M
3300010359\|Ga0126376_10032177	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3558	Open in IMG/M
3300010359\|Ga0126376_10652685	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → unclassified Verrucomicrobiae → Verrucomicrobiae bacterium AMD-G2	1004	Open in IMG/M
3300010359\|Ga0126376_11355928	Not Available	734	Open in IMG/M
3300010359\|Ga0126376_11770941	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	655	Open in IMG/M
3300010359\|Ga0126376_11902450	Not Available	635	Open in IMG/M
3300010359\|Ga0126376_12572656	Not Available	557	Open in IMG/M
3300010359\|Ga0126376_13182792	Not Available	508	Open in IMG/M
3300010360\|Ga0126372_10532388	Not Available	1111	Open in IMG/M
3300010360\|Ga0126372_10744613	Not Available	963	Open in IMG/M
3300010360\|Ga0126372_11216023	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	778	Open in IMG/M
3300010360\|Ga0126372_12102071	Not Available	613	Open in IMG/M
3300010361\|Ga0126378_10316471	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CB3035	1666	Open in IMG/M
3300010361\|Ga0126378_13180765	Not Available	522	Open in IMG/M
3300010361\|Ga0126378_13217951	Not Available	519	Open in IMG/M
3300010362\|Ga0126377_10493731	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1254	Open in IMG/M
3300010362\|Ga0126377_10746647	Not Available	1034	Open in IMG/M
3300010366\|Ga0126379_10364130	Not Available	1481	Open in IMG/M
3300010366\|Ga0126379_10425975	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1382	Open in IMG/M
3300010376\|Ga0126381_100063905	All Organisms → cellular organisms → Bacteria	4559	Open in IMG/M
3300010398\|Ga0126383_10062541	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3163	Open in IMG/M
3300010398\|Ga0126383_10582712	Not Available	1188	Open in IMG/M
3300010398\|Ga0126383_10793281	Not Available	1030	Open in IMG/M
3300010398\|Ga0126383_12539181	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300011269\|Ga0137392_11072343	Not Available	661	Open in IMG/M
3300011271\|Ga0137393_10070520	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2786	Open in IMG/M
3300011271\|Ga0137393_10350805	Not Available	1260	Open in IMG/M
3300012189\|Ga0137388_12008215	Not Available	506	Open in IMG/M
3300012202\|Ga0137363_10042568	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium zhanjiangense	3208	Open in IMG/M
3300012202\|Ga0137363_10609137	Not Available	922	Open in IMG/M
3300012202\|Ga0137363_10823235	Not Available	788	Open in IMG/M
3300012202\|Ga0137363_11073560	Not Available	684	Open in IMG/M
3300012205\|Ga0137362_10403570	All Organisms → cellular organisms → Bacteria → Proteobacteria	1184	Open in IMG/M
3300012205\|Ga0137362_10889312	Not Available	761	Open in IMG/M
3300012361\|Ga0137360_10137269	Not Available	1922	Open in IMG/M
3300012683\|Ga0137398_10204532	Not Available	1303	Open in IMG/M
3300012683\|Ga0137398_10319601	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CB3035	1046	Open in IMG/M
3300012683\|Ga0137398_10981380	Not Available	586	Open in IMG/M
3300012917\|Ga0137395_10050315	Not Available	2616	Open in IMG/M
3300012917\|Ga0137395_10146661	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1612	Open in IMG/M
3300012917\|Ga0137395_10412794	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CB3035	967	Open in IMG/M
3300012918\|Ga0137396_10437125	Not Available	970	Open in IMG/M
3300012948\|Ga0126375_10789695	Not Available	750	Open in IMG/M
3300012971\|Ga0126369_10076735	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2950	Open in IMG/M
3300012971\|Ga0126369_10173797	Not Available	2051	Open in IMG/M
3300012971\|Ga0126369_10293302	Not Available	1623	Open in IMG/M
3300012971\|Ga0126369_12857833	Not Available	565	Open in IMG/M
3300015241\|Ga0137418_10036079	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4567	Open in IMG/M
3300015241\|Ga0137418_10277932	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1409	Open in IMG/M
3300016270\|Ga0182036_11009701	Not Available	686	Open in IMG/M
3300016357\|Ga0182032_11712623	Not Available	548	Open in IMG/M
3300016422\|Ga0182039_11122221	Not Available	709	Open in IMG/M
3300016422\|Ga0182039_11647922	Not Available	586	Open in IMG/M
3300016422\|Ga0182039_11825022	Not Available	557	Open in IMG/M
3300016445\|Ga0182038_10127736	All Organisms → cellular organisms → Bacteria	1901	Open in IMG/M
3300016445\|Ga0182038_11894490	Not Available	539	Open in IMG/M
3300017823\|Ga0187818_10168063	All Organisms → cellular organisms → Bacteria → Proteobacteria	955	Open in IMG/M
3300017928\|Ga0187806_1256056	Not Available	607	Open in IMG/M
3300017955\|Ga0187817_10635439	Not Available	681	Open in IMG/M
3300018001\|Ga0187815_10476381	Not Available	534	Open in IMG/M
3300020579\|Ga0210407_11221088	Not Available	565	Open in IMG/M
3300021086\|Ga0179596_10254873	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	867	Open in IMG/M
3300021086\|Ga0179596_10709933	Not Available	509	Open in IMG/M
3300021168\|Ga0210406_10309046	Not Available	1284	Open in IMG/M
3300021170\|Ga0210400_10605371	Not Available	903	Open in IMG/M
3300021560\|Ga0126371_10067114	All Organisms → cellular organisms → Bacteria → Proteobacteria	3476	Open in IMG/M
3300021560\|Ga0126371_10169348	All Organisms → cellular organisms → Bacteria → Proteobacteria	2260	Open in IMG/M
3300021560\|Ga0126371_12637109	Not Available	609	Open in IMG/M
3300021560\|Ga0126371_13175281	Not Available	556	Open in IMG/M
3300026320\|Ga0209131_1106871	All Organisms → cellular organisms → Bacteria → Proteobacteria	1467	Open in IMG/M
3300026355\|Ga0257149_1008475	Not Available	1304	Open in IMG/M
3300026356\|Ga0257150_1064833	Not Available	549	Open in IMG/M
3300026376\|Ga0257167_1064980	Not Available	569	Open in IMG/M
3300026446\|Ga0257178_1030412	Not Available	670	Open in IMG/M
3300026467\|Ga0257154_1002515	Not Available	2221	Open in IMG/M
3300026467\|Ga0257154_1020419	Not Available	960	Open in IMG/M
3300026467\|Ga0257154_1041345	Not Available	706	Open in IMG/M
3300026467\|Ga0257154_1060486	Not Available	593	Open in IMG/M
3300026482\|Ga0257172_1023176	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CB3035	1101	Open in IMG/M
3300026494\|Ga0257159_1076918	Not Available	577	Open in IMG/M
3300026496\|Ga0257157_1007999	All Organisms → cellular organisms → Bacteria	1653	Open in IMG/M
3300026496\|Ga0257157_1051546	Not Available	693	Open in IMG/M
3300027826\|Ga0209060_10053727	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1935	Open in IMG/M
3300027826\|Ga0209060_10092245	All Organisms → cellular organisms → Bacteria → Proteobacteria	1420	Open in IMG/M
3300027826\|Ga0209060_10106550	Not Available	1310	Open in IMG/M
3300027846\|Ga0209180_10029602	Not Available	2946	Open in IMG/M
3300027862\|Ga0209701_10335150	Not Available	860	Open in IMG/M
3300027898\|Ga0209067_10009973	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5051	Open in IMG/M
3300027903\|Ga0209488_10043719	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3289	Open in IMG/M
3300027903\|Ga0209488_10052821	All Organisms → cellular organisms → Bacteria	2993	Open in IMG/M
3300027903\|Ga0209488_10075890	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2497	Open in IMG/M
3300027903\|Ga0209488_10156504	Not Available	1721	Open in IMG/M
3300027903\|Ga0209488_10769729	Not Available	685	Open in IMG/M
3300028047\|Ga0209526_10044504	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	3123	Open in IMG/M
3300031573\|Ga0310915_11294576	Not Available	502	Open in IMG/M
3300031770\|Ga0318521_10794454	Not Available	577	Open in IMG/M
3300031890\|Ga0306925_10576617	Not Available	1191	Open in IMG/M
3300031910\|Ga0306923_10414260	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1532	Open in IMG/M
3300031910\|Ga0306923_10967741	Not Available	927	Open in IMG/M
3300031946\|Ga0310910_10393445	All Organisms → cellular organisms → Bacteria	1098	Open in IMG/M
3300031947\|Ga0310909_11015987	Not Available	677	Open in IMG/M
3300032076\|Ga0306924_11628964	Not Available	679	Open in IMG/M
3300032076\|Ga0306924_12279134	Not Available	550	Open in IMG/M
3300033289\|Ga0310914_11251780	Not Available	644	Open in IMG/M
3300033806\|Ga0314865_227596	Not Available	503	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.09%
Host-Associated	Host-Associated	2.91%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	93.02%
Aquatic	Environmental → Aquatic	4.07%
Arthropoda	Host-Associated → Arthropoda	1.74%
Plants	Host-Associated → Plants	1.16%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	93.02%
Freshwater	Environmental → Aquatic → Freshwater	2.33%
Sediment	Environmental → Aquatic → Sediment	1.74%
Digestive System	Host-Associated → Arthropoda → Digestive System	1.74%
Roots	Host-Associated → Plants → Roots	0.58%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.58%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	76.74%
Loam	Environmental → Terrestrial → Soil → Loam	15.70%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.33%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.74%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	1.74%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.58%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.58%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.58%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	56.40%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	18.60%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	13.95%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.33%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.74%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.74%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	1.74%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.58%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.58%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.58%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	27.91%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	25.00%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	13.37%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.98%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.49%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.33%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.74%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.74%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.74%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	1.74%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.58%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.58%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.58%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.58%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002906	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006177	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2	Host-Associated	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009826	Embiratermes neotenicus P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P1	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010049	Embiratermes neotenicus P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P3	Host-Associated	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026355	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-02-A	Environmental	Open in IMG/M
3300026356	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-A	Environmental	Open in IMG/M
3300026376	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-02-B	Environmental	Open in IMG/M
3300026446	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-B	Environmental	Open in IMG/M
3300026467	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-A	Environmental	Open in IMG/M
3300026482	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-B	Environmental	Open in IMG/M
3300026494	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-A	Environmental	Open in IMG/M
3300026496	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-A	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033806	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_50_20	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25614J43888_101250473	3300002906	Grasslands Soil	LPFKVVRTNSHDEVLARAANLLVGRAAYETARRLYPRDMIQYRNGAQIIERSDEG*
JGI25617J43924_100459713	3300002914	Grasslands Soil	MLPEDPPFRVIRVNSEDEILARATNLIIGRAAYETAVRLYPRDRIDYRDGARIIERSGP*
Ga0066388_1008180731	3300005332	Tropical Forest Soil	MHPENLPFRVIRVNSEDEVIARANNHLVGRAAYETAVRLYPRDTIQYRDEAKIIERSDRERGLG*
Ga0066388_1021786592	3300005332	Tropical Forest Soil	MRPENLPFRVIRVNSEDEVIARAQNLLVGRAAYETAVRLYPRDTIQYRDGARIIARSEPKAS*
Ga0066388_1021831721	3300005332	Tropical Forest Soil	MDVDLPFKVVRTNAHDEVIARAANLLMGRAAYEAARRLYPRDRIDYRCGARVIERSDEG*
Ga0066388_1023302152	3300005332	Tropical Forest Soil	MQDELPFKVVRTNAHDEVIARAANLLVGRAAYETARRLHPRDTIQYRDGARIIARSDGDN
Ga0066388_1024063641	3300005332	Tropical Forest Soil	MSEDLPFKVVRANAHDEVIARANNLLVGRAACETARRLYPQDTIHYRRGARVIERSDEGS
Ga0066388_1028982812	3300005332	Tropical Forest Soil	MPDDDLPFKVVRTNARDEVLARAANLIVGRAAYETAWRLYPQDRIDYRCRTRVIERSDETKN*
Ga0066388_1041737032	3300005332	Tropical Forest Soil	MIPEDLAFRVIRVNSEDEVIARANNLLVGRAAYETAVGLYPRDLTQYRGGAEDYF*
Ga0066388_1045101371	3300005332	Tropical Forest Soil	MHPENLPFRVIRVNSEDEVIARANNLIVGRAAYETAVRLYPRDTIQYRDGARLIARSEPKPG*
Ga0066388_1053304291	3300005332	Tropical Forest Soil	MLPEDLPYSVTNEHNEVLVRADNLHIGRAAYETAIMLFPKDRIQYRNGAQIIARSDGSKPSG*
Ga0066388_1059928321	3300005332	Tropical Forest Soil	VIRVNSEDEVIARANNLIVGRAAYETAVRLYPRDTIHYRHGARIIERSDGQGG*
Ga0070711_1013436831	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MLDEDLPFKVVRTNSHDEILAHAANLLVGRAAYETATRLFPKDAIQFRNGTQIIARSDRGRRN*
Ga0070711_1014940101	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MYPEELPFKVVRVQSEDEVLARATNLILGRAAYETAVRLFPRDVIHYRNGAQIIARSDQGNG*
Ga0070734_100446443	3300005533	Surface Soil	MFDEDLPFKVVRTNSHDEILARAANLLVGRAAYETAIRLFPNDNIQYRNGAQIITRSDGRSGDSQPRR*
Ga0070734_101162633	3300005533	Surface Soil	MLSEDLPFKVVCTNGHDEILVRAGNLHIGRAAYETAIRLFPKDAIQYRNGAQIIARSDR*
Ga0070734_101429212	3300005533	Surface Soil	MLDEGLPFKVVRTNSHDEILARAANLLVGRAAYETAIRLFPRDAIQFRNGAQIIARSNQGGDP*
Ga0066903_1000205303	3300005764	Tropical Forest Soil	MPEENLPFKVVRTNSDDEVLARAASLIVGRAAYQAARRLYPKDLIEYRCGARVREVRESKN*
Ga0066903_1000937023	3300005764	Tropical Forest Soil	MVPEDLPFRVIRVNSEDEVIARANNLIVGLAAYETAVRLYSKETIHYRDGARIIERSDVGEV*
Ga0066903_1001515196	3300005764	Tropical Forest Soil	MPDDDLPFKVVRTNARDEVLARAANLIVGRAAYETAWRLCPQDRIDYRCRTRVIERSDETKN*
Ga0066903_1002104006	3300005764	Tropical Forest Soil	VKSPGDMDDDLPFKVVRTNAHDEVIGRAANLLVGRAAYETARRLYPQDGIDYRCGARVIERSDEG*
Ga0066903_1005329653	3300005764	Tropical Forest Soil	MVEELPFKVVRTNAHDEVIARAGNLLVGRAAYETARRLYPRDIIHHRCAARIIERSDEPNKSD*
Ga0066903_1011539291	3300005764	Tropical Forest Soil	DDLPFKVVRTNPHDEILARAANLLVGRAAYETAIRLFPMDAIQLRNGAQIIARSGDS*
Ga0066903_1021841123	3300005764	Tropical Forest Soil	LEALPLPNEDLPFKVVRTNSHDEVIASAANLVLGRAAYETARRMYLRDRIDYRHGAKVIERSDEPT*
Ga0066903_1026011341	3300005764	Tropical Forest Soil	MSEDLPFKVVRANAHDKVIARANNLLVGRAACETARRLYPQDTIHYRRGARVIERSDEGS
Ga0066903_1035197481	3300005764	Tropical Forest Soil	MIPEDLPFRVIRVNSKDEVIARANNLIVGRAAYETAVRLYPKDTIHYRDGARITERSEPKAS*
Ga0066903_1038405672	3300005764	Tropical Forest Soil	MHPEDLPFRVIRVNSEDEVIARANNLVVGRAAYETAVRLYPKDKIQYRNGARIIARSEPKAS*
Ga0066903_1042515731	3300005764	Tropical Forest Soil	MIRSHPTSPLEALPMLPEDLPFRVIRVNSEDEVIARANNLLVGRAAYETAVRLYPRDTIQYRDGARIIERSEPLA*
Ga0066903_1047677842	3300005764	Tropical Forest Soil	MHPEDLPFRVIRVNSEDEVIARANSLIVGRAAYETAVRLYPRDVIQYREGARIIARSEPKASSS*
Ga0066903_1081766902	3300005764	Tropical Forest Soil	MIPEDLPFRVIRVNGEDEVMARANNLLVGRAAYETAVGLYPRDLIQYRDGARIIWRSDGSKA*
Ga0075028_1009799201	3300006050	Watersheds	MLDEELPFKVVRTNSHDEVLARSVNLLVGRAAYETAVRLYPRDLIEYRHKARVIERSEEG
Ga0070715_107077021	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MAPNEWTSPMHPENLPFRVIRVNSQDEVLARAANLIVGRAAYETAVRLYPKDLIHYRDGARIDEEG
Ga0075362_101337392	3300006177	Populus Endosphere	MPQEDLPFKVVRVNLSDEVLARAGNLLIGRAAYNEAVKRYPKDTIQYRDGTRVIERHPEER*
Ga0075021_107985462	3300006354	Watersheds	LPFKVVRTNSHDEILARATNLLVGRAAYETAIRLFPQDAIQLRNGAQIIARSDRGGDP*
Ga0099791_102163152	3300007255	Vadose Zone Soil	MLPEDLPFRVIRVNSEDEVLARANNLLVGRAAYETAVRLYPKDTIQYRDGARIIARSEPKPS*
Ga0099793_100925054	3300007258	Vadose Zone Soil	MLAEDLPFRVIRVNSEDEVLARATNLIIGRAAYETAVRLFPKDTIQYRNGAQVIARSEPQATKMS*
Ga0099793_105758901	3300007258	Vadose Zone Soil	MLPEDLPFRVIRINSEDEILARATNLIIGRAAYETAVRMFPKDTIQYRDGARII
Ga0099794_102131532	3300007265	Vadose Zone Soil	MEDLPFKVVRDDPYEVLALTANLLIGRAAYETARRMFPGDRIDYRNGAQIIARSDQERG*
Ga0099795_100944113	3300007788	Vadose Zone Soil	MLPEDLPFRVIRVNSEDEVLARANNLLVGRAAYETAVRLYPRDLIQYRDGARIIARSDKGGLAP*
Ga0099829_102350902	3300009038	Vadose Zone Soil	MLPEDLPFRVIRVNSEDEVLARAANLIVGRAAYETARRLYPKDTIQYRNGAQIIARSVHEASRKV*
Ga0099829_105915942	3300009038	Vadose Zone Soil	MLPEDLPFRVIRVNSEDEVLARANNLIVGRAAYETAVRLYPRDTIQYRDGARIIARSEPKPS*
Ga0099830_109574551	3300009088	Vadose Zone Soil	PFRVIRVNSEDEVLARATNLIIGRAAYETARRLFPKDTIQYRNGAQVIARSEPQATKMS*
Ga0099827_115239022	3300009090	Vadose Zone Soil	MLPEGLPFRVIRVNSEDEVLARATNLIIGRAAYETAVRLFPKDTIQYRNGAQVIARSEPEATKMS*
Ga0075418_114642792	3300009100	Populus Rhizosphere	RPGDTSMEDLPFKVVRTNGTDEVLARAGNLLVGRAAFEKAVTLYPQDRIELRHLARIIERNAAER*
Ga0099792_100132693	3300009143	Vadose Zone Soil	MLPEDLPFRVIRINSEDEILARATNLIIGRAAYETAVRMFPKDTIQYRDGARIIARSDQRDTP*
Ga0099792_104931902	3300009143	Vadose Zone Soil	PLYEPAPMIPEDLPFRVVRVNSEDEVIARANNLLVGRAAYETPVRLYSRDRIDYRDSARIIARSDRERS*
Ga0099792_106369701	3300009143	Vadose Zone Soil	VIRINSEDEVLARDGNLVIGRAAFETARRLFPKDVIHFRNGAQIIARSEPEATNMS*
Ga0126374_100079361	3300009792	Tropical Forest Soil	MPEENLPFKVVRTNSDDEVLARAASLIVGRAAYQAARRLYPKDLIEYRCGARVLERSREGS*
Ga0126374_102991442	3300009792	Tropical Forest Soil	MIPEVLPFRVIRTNSEVEVVARANDRRVGRAAYETAVRLYPRDTIQYRDGARIIARSEP
Ga0126374_104134802	3300009792	Tropical Forest Soil	MLPEDLPFRVIRVNSEDEVIARANNLIVGRAAYETAVRLYPRDEIQYRDGARIIARSDGGGASLR*
Ga0126374_117844751	3300009792	Tropical Forest Soil	MLPEDLPFRVIRVNSEDEVIARANNLIVGRAAYDTGVRLYPRDTIHYRHRARIIERSDSPPSATANS*
Ga0123355_112495762	3300009826	Termite Gut	MASFERPAMHSENLRFRVVRVNSEDEVIARANNLIVGRAAYETAVRLYPKDTIQYRDGARIIAGTTSQHFMDKHDK*
Ga0123355_116276742	3300009826	Termite Gut	RGTVMHSENLRFRVVRVNPEDEVIARANNLIVGRAAYETAVRLYPRDMIQYREGARIIARSEPKASS*
Ga0126380_100435574	3300010043	Tropical Forest Soil	MLPEDLPFRVIRVNSKDEVIARANNLIVGRAAYETAVRLYPKDTIHYRDGARITERSEPKAS*
Ga0126380_115973552	3300010043	Tropical Forest Soil	MLPEDLPFKVVRTNSHDEVLARAANLIVGRAAYETAIRLFPRDTIHYRNGAQIIARSDRGKADG*
Ga0126384_102875661	3300010046	Tropical Forest Soil	MLPEDLPFRVIRVNSEDEVIARANNLIVGRAAYETAVRLYPRDTIHYRDGARIIERSQPLNKKAPPH*
Ga0126384_106454201	3300010046	Tropical Forest Soil	MHPENLPFRVIRVNSEDEVIARANNLVVGRAAYETAVRLYPKDKIQYRNGARIIARSEPKAS*
Ga0126373_116342571	3300010048	Tropical Forest Soil	MVPEDLPFRVIRVNSEDEVIARANNLIVGRAAYETAVRLYSKETIHYRDGARIIERSDVGEV*
Ga0123356_102564474	3300010049	Termite Gut	MASFERPAMHSENLRFRVVRVNSEDEVIARANNLIVGRAAYETAVRLYPKDTIQYRDGARIIAGNEPTTSP*
Ga0099796_100150773	3300010159	Vadose Zone Soil	PFRVIRVNSEDEVIARHNNLLVGRAAYETAVRLYPRDTVQYRDGVRIIARSDRSGG*
Ga0126370_101966883	3300010358	Tropical Forest Soil	LICSSIGPLEALPLPNEDLPFKVVRTNSHDEVIASAANLVLGRAAYETARRMYLRDRIDYRHGAKVIERSDEPT*
Ga0126370_106087922	3300010358	Tropical Forest Soil	VPAEAPHMLPEDLPFRVIRVNSKDEVIARANNLIVGRAAYETAVRLYPRDVIQYRDGARIITRSDGERG*
Ga0126370_109550293	3300010358	Tropical Forest Soil	MIPEDLPFRVIRVNGEDEVMAHANNLLVGRAAYETAVGLYPRDLIQYRDGARII
Ga0126370_111043741	3300010358	Tropical Forest Soil	MLPEDLPYCVTNDHDEVLVRADNLHIGRAAYETAIRLFPKDRIQYRNGAQIIARSDGSKASG*
Ga0126370_111758522	3300010358	Tropical Forest Soil	MHPENLPFRVIRVNSEDEVIARANNLIVGRAAYETAVRLYPKDKIQYRSGARIIARSEPK
Ga0126370_124958441	3300010358	Tropical Forest Soil	MFDDDLPFKVVRTNPHDEILARAANLLVGRAAYETAIRLFPMDAIQLRNGAQIIARSGDS
Ga0126376_100307463	3300010359	Tropical Forest Soil	MPDEDLPFKVVRTNSHDEVIARAANRLVGGAANETARRLYPRDRIDYRCGARVIERSDEG
Ga0126376_100321775	3300010359	Tropical Forest Soil	MQDDLPFKVVRTNAHDEIIARAANLLVGRAAYETARRLYPQDRIDYGCGARVIERSDKTEN*
Ga0126376_106526852	3300010359	Tropical Forest Soil	MLDDDLPFKVVRTNAHDEVIARAANLIVGRVAYETARRLYPRDRIDYRCGARVIERSDDTEN*
Ga0126376_113559281	3300010359	Tropical Forest Soil	MLPEDLPFRVIRVNSDDEVIARANNLLVGRAAYETAVRLYPRDAIQYRDGARIIAMSEPKPS*
Ga0126376_117709411	3300010359	Tropical Forest Soil	MPDDDLPFKVVRTNAHDEVIARAANLLVGRAAYETARGLYPRDRIDYRCGARVIERSDEG
Ga0126376_119024501	3300010359	Tropical Forest Soil	MPEENLPFKVVRTNSDDEVLARAASLIVGRAAYQAARRLYPKDLIEYRCGARVIERSREGS*
Ga0126376_125726562	3300010359	Tropical Forest Soil	MPEEDLPFKVVRTNSDDEVLARAASLIVGRAAYQAARRLYPKDLIEYRCGARVIERSRERS*
Ga0126376_131827921	3300010359	Tropical Forest Soil	MPDEDLPFKVVRTNAHDEIIARAANLLVGRAAYETARRMYPRDRIDYRCGARVIERSDENGAKG*
Ga0126372_105323881	3300010360	Tropical Forest Soil	MHPEDLPFRVIRVNSEDEVITRANNLIVGRAAYETALRLYPRDTIHYRDGARIIARSDGE
Ga0126372_107446131	3300010360	Tropical Forest Soil	MLPENLPFRVIRVNSEDEVIARANNLLVGRAAYETAVRLYPRDVIQYRDGARIIERSDRENGGSDPG*
Ga0126372_112160231	3300010360	Tropical Forest Soil	VIFVNSEDEVIASANNLIVGRAAYETAVRLYPKDRIEYRDGARIIARSDGQGS*
Ga0126372_121020712	3300010360	Tropical Forest Soil	MPEENLPFKVVRTNSDDEVLARAASLIVGRAAYQAARRLYPKDLIEYRCGARVIERSRKGS*
Ga0126378_103164713	3300010361	Tropical Forest Soil	MLPEDLPFRVIRVNSEDEVIARANNLIVGRAAYEAAVRLYPRDVIHYRDGVRIIERGEPLNKKAPPH*
Ga0126378_131807652	3300010361	Tropical Forest Soil	MQDDLPFKVVRANAHDEIIARAANLIVGRAAYETARRLYPKDRIDYRHGARVIERSDAG*
Ga0126378_132179511	3300010361	Tropical Forest Soil	MFDEDLPFKVVRTNAHDEILARAANLLVGRAAYETAIRLFPKDAIQFRNGAQIIARSDRGRGDW*
Ga0126377_104937312	3300010362	Tropical Forest Soil	MISEDLPFRVIRVNSEDEVIARANNLLVGRAAYETAVRLYPRDVIQYRDGARIIERSEPKANQ*
Ga0126377_107466471	3300010362	Tropical Forest Soil	MDVDLPFKVVRTNAHDEVIARAANLLMGRAAYEAARRLYPRDRIDYRCGARVIERSDGG*
Ga0126379_103641304	3300010366	Tropical Forest Soil	MFVICSYSRFAEAPAMQDELPFKVVRTNAHDEVIARAANLLVGRAAYETARRLHPRDTIQYRDGARIIARSDGDN*
Ga0126379_104259751	3300010366	Tropical Forest Soil	MHPENLPFRVIRVNSEDEVIARANNLIVGRAAYETAVRLYPKDKIQYRSGARIIARSEPKAS*
Ga0126381_1000639051	3300010376	Tropical Forest Soil	RRPMSEDLPFKVVRANAHDKVIARANNLLVGRAACETARRLYPQDTIHYRRGARVIERSDEGS*
Ga0126383_100625413	3300010398	Tropical Forest Soil	MQDDLPFKVVRTNAHDEIIARAANLLVGRAAYETARRLYPQDRIDYRRGARVIKRSDET*
Ga0126383_105827122	3300010398	Tropical Forest Soil	MLPEGLPFRVIRVNSEDEVIARASNLIVGRAAYETAVRLYPRDTIQYRDGARIIERSEPKATP*
Ga0126383_107932813	3300010398	Tropical Forest Soil	MPQEDLPFKVVRTNSDDEVLARAASLIVGRAAYQAARRLYPKDLIEYRCGARVIERSREGS*
Ga0126383_125391811	3300010398	Tropical Forest Soil	MVEELPFKVVRTNAHDEVIARAGNLLVGRAAYETAGRLYPRDIIHYWCGARIIERSDGGEAKG*
Ga0137392_110723431	3300011269	Vadose Zone Soil	MLPEGLPFRVIRVNSEDEVLARAANLVIGRAAFETARRLFPKDVIHFRNGAQIIARSEPQATNMS*
Ga0137393_100705203	3300011271	Vadose Zone Soil	MPPEDLPFKVVRTNSHDEVLARANNLVVGRAAYETARRRYPQDLIQYRDGARVIARSDRG
Ga0137393_103508053	3300011271	Vadose Zone Soil	MIPEDLPFRVIRVNSEDEVLARATNLIIGRAAYETARRLFPKDTIQYRNGAQVIARSEPEATNMS*
Ga0137388_120082151	3300012189	Vadose Zone Soil	MKELAMFDEDLPFKVVRVNSHDEVIARSANLLVGRAAYETARRLFPNDRIQYRNGAQII
Ga0137363_100425685	3300012202	Vadose Zone Soil	MLPEDLPFRVIRVNSEDEILARATNLIIGRAAYETALRMYPRDTIQYRDGARIIDRSDRDEVKR*
Ga0137363_106091372	3300012202	Vadose Zone Soil	MLPEGLPFRVIRVNSEHEVLARAANLVIGRAAFETARRLFPKDVIHFRNGAQIIARSEPEATNMS*
Ga0137363_108232351	3300012202	Vadose Zone Soil	MLPEDLPFRVIRVNSEDEVLARATNLIIGRAAYETAVRMFPKDTIQYRNGAQVIARSEPGATKMS*
Ga0137363_110735602	3300012202	Vadose Zone Soil	RVNSEDEVIARANNLLVGRAAYETAVRLYPRDLIQYRDGARIIARSGGSDLSEGEFVR*
Ga0137362_104035702	3300012205	Vadose Zone Soil	VIRINSEDEVLARAGNLVIGRAAFETARRLFPKDVIHFRNGAQIIARSEPEATNMS*
Ga0137362_108893121	3300012205	Vadose Zone Soil	MLPEDLPFRVIRVNSEDEVLARANNLLVGRAAYETAVRLYPRDLIMYRDGARIIARSDRD
Ga0137360_101372691	3300012361	Vadose Zone Soil	MIPEDLPFRVNSEDEVLARANNLIVGRAAYETAVRLYPRDLIQYRDGARLIARSEPLNKKAPPH*
Ga0137398_102045322	3300012683	Vadose Zone Soil	MVPEDLPFRVIRINSEDEILARATNLIIGRAAYETAVRLYPRDTIQYRDGARIIARSDRDQGG*
Ga0137398_103196012	3300012683	Vadose Zone Soil	MLPEDLPFRVIRVNSEDEVLALANNLTVGRAAYETAVRLYPRDTIQYRDGARIIARSEPKPS*
Ga0137398_109813802	3300012683	Vadose Zone Soil	MLAEDLPFRVIRVNSEDEVLARATNLIIGRAAYETAVRLFPKDTIQYRNGAQVIARSEPQATTMS*
Ga0137395_100503151	3300012917	Vadose Zone Soil	MLAEDLPFRVIRVNSEDEVLARATNLIIGRAAYETAVRMFPKDTIQYRNGAQIIARSEPKMS*
Ga0137395_101466611	3300012917	Vadose Zone Soil	MIPEDLPFRVIRVNSEDEVLARATNLIIGRAAYETARRLFPKDTIHYRDGARIIARNDQDQG*
Ga0137395_104127942	3300012917	Vadose Zone Soil	MLPEDLPFRVIRVNSEDEVLARANNLLVGRAAYETAVRLYPKDTIQYRDRARIIARSEPKPS*
Ga0137395_109053762	3300012917	Vadose Zone Soil	LLLPAMKVLAMFDEDLPFKVVRVNSHDEVIARSANLLVGRAAYETARRLFPNDRIQYRNGAQIIARSDKGG*
Ga0137396_104371252	3300012918	Vadose Zone Soil	MLDEDLPFKVVRINSHDEVLARAANLIVGRAAYETALRLFPKDTIQYRNGAQIIARSDRGEPRD*
Ga0126375_107896951	3300012948	Tropical Forest Soil	MEDLPFKVVRTNAQDEILAQAANLLLGRAAYETAVRLYPQDRVEYRCGARVIERSDRDE*
Ga0126369_100767352	3300012971	Tropical Forest Soil	MHPEKLHFRVIRVNSEDEVIARANNLIVGRAAYETAVRLYPKDTIQYRDGARIIARSDSQDG*
Ga0126369_101737972	3300012971	Tropical Forest Soil	MHPENLPFRVIRVNSEDEVIARANNLIVGRAAYETAVRLYPKDKIQYRNGARIIARSEPKAS*
Ga0126369_102933022	3300012971	Tropical Forest Soil	MPSVDDDDLPFKVVRTNSRDEVIARAGNLLVGRAAYETAARMYPRDRIEYRHGALVMERNYSEDGRMG*
Ga0126369_128578333	3300012971	Tropical Forest Soil	YTVTNDHNEVLVRAADLHIGRAAYDTAIRLFPKDRIQYRNGGQIIARSDESTASGQRGKQR*
Ga0137418_100360798	3300015241	Vadose Zone Soil	MIPEDLPFRVIRVNSEDEVLARATNLIIGRAAYETAVRLFPKDTIQYRNGAQVIXXXXPGDKDVLILA*
Ga0137418_102779323	3300015241	Vadose Zone Soil	MIPEDLPFRVIRVNSQDEVIARANNLLVGRAAYETAVRLYPKDTIQYRDRARIIARSEPKPS*
Ga0182036_110097011	3300016270	Soil	MQDDLPFKVVWTNAHDEIIARAANLIVGRAAYETARRLYPQDRIDYRCGARVIERSD
Ga0182032_117126231	3300016357	Soil	MDDDLPFKVVRSNSDDEIIARANNLLVGRAAYETARGMYPRDLIEYRNGAQVIERSDEASRPHRYPPVTNERSLN
Ga0182039_111222212	3300016422	Soil	SQCLPSEAQPMPDDLPFKVRTNAQDEVIARAANPLVGRAAYETARRMYPQDRIDYRCGARVIERSDVAKG
Ga0182039_116479221	3300016422	Soil	LFLFPLAEAPAMQDDLPFKVVRTNAHDEIIARASNLLVGRAAYETARRLYPRDRIDYRCGARVIERSDEGS
Ga0182039_118250221	3300016422	Soil	MLDEDLPFKVVRTNSHDEILARAANLLVGRAAYETAIRLFPKDAIQFRNGAQIIARSDRERRD
Ga0182038_101277364	3300016445	Soil	MQDDLPVKVVRTNTHDEIIARAANLLVGRAAYETARRMYPRDRIDYRCGATNAELL
Ga0182038_118944902	3300016445	Soil	MDDDLPFKVVRSNSDDEVIARANSLLVGRAAYETARRMYPRDLIEYQHGAQVIERSDRD
Ga0187818_101680631	3300017823	Freshwater Sediment	MLPEDLPFKVVRTNSHDEVLARAANLIVGRAAYETAVRLFPRDTIHYRNGAQIIARSDAGRADG
Ga0187806_12560561	3300017928	Freshwater Sediment	MLPEDLPFKVVRTNSHDEVLARAANLIVGRAAYETAVRLFPRDTIHYRNGAQIIARSDGDKDYE
Ga0187817_106354391	3300017955	Freshwater Sediment	MLPEDLPFKVVRTNSHDDVLARAANLIVGRAAYETAVRLFPRDTIHYRNGAQIIARSDAG
Ga0187815_104763811	3300018001	Freshwater Sediment	MLPEDLPFKVVRTNSHDEVLARAANLIVGRAAYETAVRLFPRDTIHYRNGAQIIARSDAGRA
Ga0210407_112210881	3300020579	Soil	MIPEDLPFRVIRINSEDEVIARANNLIVGRAAYETAVRLHPKDLIHYRHGARIIVRSDRETG
Ga0179596_102548731	3300021086	Vadose Zone Soil	MLAEDLPFRVIRVNSEDEVLARATNLIIGRAAYETAVRLFPKDTIQYRNGAQVIARSEPQATKMS
Ga0179596_107099331	3300021086	Vadose Zone Soil	MLPEDLPFRVIRVNSEDEVIARANNLIVGRAAYETAVRLYPRDRIDYRDGARIIARSDRDRD
Ga0210406_103090461	3300021168	Soil	MHPENLPFRVIRVNSQDEVIARASNLLVGRAAYETAVRLYPKDLIHYRDGARIIARSDELSSGRA
Ga0210400_106053711	3300021170	Soil	MPPEDLPFRVICVNSEDEVLVRAGNLSIGQAAFETARRLFPKDRIQYRDGARIIARSDREVRDAEN
Ga0126371_100671143	3300021560	Tropical Forest Soil	MVPEDLPFRVIRVNSEDEVIARANNLIVGLAAYETAVRLYSKETIHYRDGARIIERSDVGEV
Ga0126371_101693482	3300021560	Tropical Forest Soil	MPDDDLPFKVVRTNARDEVLARAANLIVGRAAYETAWRLCPQDRIDYRCRTRVIERSDETKN
Ga0126371_126371091	3300021560	Tropical Forest Soil	MLDDDLPFKVVRTNAHDEVIARAANLIVGRVAYETARRLYPRDRIDYRRGARVIERSDDTEN
Ga0126371_131752812	3300021560	Tropical Forest Soil	MFPEDLPYSVTNDHDEVLVRAADQYIGRAAYETARQLFPNDRIQYRNGAQIIARSDQPAVMPAR
Ga0209131_11068712	3300026320	Grasslands Soil	VIRINSEDEVLARAGNLVIGRAAFETARRLFPKDVIHFRNGAQIIARSEPEATNMS
Ga0257149_10084752	3300026355	Soil	MIPEDLPFRVIRVNSEDEVLARATNLIIGRAAYETARRLFPKDTIQYRNGAQVIARSEPEATNMS
Ga0257150_10648331	3300026356	Soil	MLPEDLPFRVIRVNSEDEIIARANNLLIGRAAYETAVRLYPRGLIQYRDGARIIARSDRG
Ga0257167_10649801	3300026376	Soil	FCEAPPMLPEDLPFRVIRVNSEDEVLARANNLLVGRAAYETAVRLYPKDTIQYRDRARIIARSEPKPS
Ga0257178_10304121	3300026446	Soil	DLPFRVIRVNSEDEVLARANNLIVGRAAYETAVRLYPRDTIQYRDGARIIARSEPKPS
Ga0257154_10025152	3300026467	Soil	MLEEDLPFKVVRTNSHDEVIARAANLVVGRAAYETARRLYPRDHIPYRSGTQVIERSDEGSQELTIARLRYC
Ga0257154_10204192	3300026467	Soil	MLDDEFPFKLVRTNSDDEVLAQSVNLLLGRAAYETAVRLYPNDRIDYRCGARVIERSYEE
Ga0257154_10413451	3300026467	Soil	MAIDDDDLPFKVVRTNSHDEVIARAANLLVGRAAYETADRMYSKDRIEYRKGALVMERNYEK
Ga0257154_10604861	3300026467	Soil	FYCPDNIKEHIPMIPEDLPFRVIRVNSEDEVLARATNLIIGRAAYETARRLFPKDTIQYRNGAQVIARSEPEATNMS
Ga0257172_10231762	3300026482	Soil	MLPEDLPFRVIRVNSEDEVLARANNLLVGRAAYETAVRLYPKDTIQYRDRARIIARSEPKPS
Ga0257159_10769182	3300026494	Soil	MLPENLPFRVIRINSEDEVLARANNLLVGRAAYETARSLYPRDGIHYRDGARIIARSDEERTGN
Ga0257157_10079991	3300026496	Soil	FKVVRTNSHDEVIARAANLVVGRAAYETARRLYPRDHIPYRSGTQVIERSDEGSQELTIARLRYC
Ga0257157_10515462	3300026496	Soil	VLDEDFPFKVVRTNSHDEVIARAANLVVGRAAYETARRLYPRDHIPYRNGTQVIERSDEG
Ga0209060_100537272	3300027826	Surface Soil	MFDEDLPFKVVRTNSHDEILARAANLLVGRAAYETAIRLFPNDNIQYRNGAQIITRSDGRSGDSQPRR
Ga0209060_100922452	3300027826	Surface Soil	MLDEGLPFKVVRTNSHDEILARAANLLVGRAAYETAIRLFPRDAIQFRNGAQIIARSNQGGDP
Ga0209060_101065503	3300027826	Surface Soil	MLSEDLPFKVVCTNGHDEILVRAGNLHIGRAAYETAIRLFPKDAIQYRNGAQIIARSDR
Ga0209180_100296021	3300027846	Vadose Zone Soil	MLPEDLPFRVIRVNSEDEVLARAANLIVGRAAYETARRLYPKDTIQYRNGAQIIARSVHEASRKV
Ga0209701_103351503	3300027862	Vadose Zone Soil	MPPEDLPFKVVRTNSHDEVLARANNLVVGRAAYETARRLYPQDLIQYRDGARVIARSDRG
Ga0209067_100099735	3300027898	Watersheds	MSAEELPFKVARTNSHDEVLARSANLLVGRAAYETAKRMFPGDVIEDRNGALVMERSGEG
Ga0209488_100437194	3300027903	Vadose Zone Soil	MLPEDLPFRVIRINSEDEILARATNLIIGRAAYETAVRMFPKDTIQYRDGARIIARSDQRDTP
Ga0209488_100528214	3300027903	Vadose Zone Soil	MLPEDLPFRVIRINSEDEVLARAANLIIGRAAFETARRLFPKHVIHFRNGAQIIARSAPEATNMS
Ga0209488_100758903	3300027903	Vadose Zone Soil	MIPEDLPFRVVRVNSEDEVIARANNLLVGRAAYETPVRLYSRDRIDYRDSARIIARSDRERS
Ga0209488_101565043	3300027903	Vadose Zone Soil	MVPEDLPFRVIRINSEDEILARATNLIIGRAAYETAVRLYPRDTIQYRDGARIIARSDRDQGG
Ga0209488_107697292	3300027903	Vadose Zone Soil	MLAEDLPFRVIRVNSEDEVLARATNLIIGRAAYETARRLFPKDTIQYRNGAQVIARSEPEATNMS
Ga0209526_100445043	3300028047	Forest Soil	MLEEDLPFKVVRTNSHDEVIARAANLVVGRAAYETARRLYPRDHIPYRNGAQVFERSDEGSQELTIARLRYC
Ga0310915_112945762	3300031573	Soil	MDDDLPFKVVRSNSDDEVIARANNLLVGRAAYETARRMYPRDLIEYQHGAQVIERSDRD
Ga0318521_107944541	3300031770	Soil	MFSQCLPSEAQPMPDDLPFKVRTNAQDEVIARAANPLVGRAAYETARRMYPQDRIDYRCGARVIERSDVAKG
Ga0306925_105766171	3300031890	Soil	MPDDLPFKVRTNAQDEVIARAANPLVGRAAYETARRMYPQDRIDYRCGARVIERSDVAKG
Ga0306923_104142601	3300031910	Soil	MPEEWNSAPMPEENLPFKVVRTNSDDEVLARAASLIVGRAAYQAARRLYPKDLIEYRCGARVIERSREGS
Ga0306923_109677412	3300031910	Soil	MQDDLPFKVVWTNAHDEIIARAANLIVGRAAYETARRLYPQDRIDYRCGARVIERSDEGS
Ga0310910_103934453	3300031946	Soil	EDLPFKVVRTNSDDEVLARAASLIVGRAAYQAARRLYPKDLIEYRCGARVIERSREGS
Ga0310909_110159871	3300031947	Soil	PFKVRTNAQDEVIARAANPLVGRAAYETARRMYPQDRIDYRCGARVIERSDVAKG
Ga0306924_116289641	3300032076	Soil	MLPEDLPFRVIRVISEDEVITRANNLLVGRAAYETAVRLYPRDVIHYRDGARIIARSKPK
Ga0306924_122791342	3300032076	Soil	MLPEDLPFRVIRVNSEDEVIARANNLIVGRAAYETAVRLYPKDTIHYRDGARIIARSAPKAS
Ga0310914_112517801	3300033289	Soil	MPEENLPFKVVRTNSDDEVLARAASLIVGRAAYQAARRLYPKDLIEYRCGARVIERSREG
Ga0314865_227596_205_387	3300033806	Peatland	MQDELPFKVVRTNSHDEVIARAADLIVGRAAYEAAVRLYPKDTIHYRHGTRVIERSDEPD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F035504

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences