Metagenome / Metatranscriptome Family F035516

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F035516
Family Type	Metagenome / Metatranscriptome
Number of Sequences	172
Average Sequence Length	66 residues
Representative Sequence	MKRNVFALFGAVAVLLTATVALTLSRVTPLASGIGGLKCYDIKGGIEKCSVVDRPPLIVKTSVRHTRLD
Number of Associated Samples	118
Number of Associated Scaffolds	172

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	82.25 %
% of genes near scaffold ends (potentially truncated)	27.33 %
% of genes from short scaffolds (< 2000 bps)	77.91 %
Associated GOLD sequencing projects	107
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (72.093 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (21.512 % of family members)
Environment Ontology (ENVO)	Unclassified (32.558 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (54.651 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 25.77% β-sheet: 6.19% Coil/Unstructured: 68.04%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 172 Family Scaffolds
PF06577	EipA	3.49
PF16861	Carbam_trans_C	3.49
PF02230	Abhydrolase_2	2.91
PF04909	Amidohydro_2	1.74
PF01464	SLT	1.74
PF01544	CorA	1.16
PF01068	DNA_ligase_A_M	1.16
PF00072	Response_reg	0.58
PF00196	GerE	0.58
PF11746	DUF3303	0.58
PF04055	Radical_SAM	0.58
PF03062	MBOAT	0.58
PF16868	NMT1_3	0.58
PF00211	Guanylate_cyc	0.58
PF00528	BPD_transp_1	0.58
PF13460	NAD_binding_10	0.58
PF02310	B12-binding	0.58
PF02543	Carbam_trans_N	0.58
PF04519	Bactofilin	0.58
PF00753	Lactamase_B	0.58
PF12276	DUF3617	0.58
PF13676	TIR_2	0.58
PF07690	MFS_1	0.58
PF09926	DUF2158	0.58
PF01370	Epimerase	0.58
PF03466	LysR_substrate	0.58
PF13185	GAF_2	0.58
PF00226	DnaJ	0.58

COG ID	Name	Functional Category	% Frequency in 172 Family Scaffolds
COG0598	Mg2+ and Co2+ transporter CorA	Inorganic ion transport and metabolism [P]	1.16
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	1.16
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	1.16
COG1664	Cytoskeletal protein CcmA, bactofilin family	Cytoskeleton [Z]	0.58
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.58
COG2192	Predicted carbamoyl transferase, NodU family	General function prediction only [R]	0.58

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.09 %
All Organisms	root	All Organisms	27.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.09 %
cellular organisms	root	All Organisms → cellular organisms	27.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.09 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	27.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.09 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	17.44 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.09 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	12.79 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.33 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.09 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5.81 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.33 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	1.16 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	1.74 %
Patescibacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.09 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.91 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	2.33 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	1.16 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1.16 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.74 %
Parcubacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.09 %
unclassified Burkholderiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → unclassified Burkholderiaceae	2.33 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.33 %
Caulobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter	1.16 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.74 %
Rhodomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodomicrobium	0.58 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.58 %
Candidatus Nomurabacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Nomurabacteria	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.09 %
Burkholderiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → unclassified Burkholderiaceae → Burkholderiaceae bacterium	2.33 %
unclassified Caulobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter → unclassified Caulobacter	1.16 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.74 %
unclassified Rhodomicrobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodomicrobium → unclassified Rhodomicrobium	0.58 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.58 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.58 %
Candidatus Nomurabacteria bacterium RIFCSPLOWO2_01_FULL_40_18	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Nomurabacteria → Candidatus Nomurabacteria bacterium RIFCSPLOWO2_01_FULL_40_18	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.09 %
Burkholderiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → unclassified Burkholderiaceae → Burkholderiaceae bacterium	2.33 %
Caulobacter sp. S45	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter → unclassified Caulobacter → Caulobacter sp. S45	1.16 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.74 %
Rhodoplanes sp. JGI PP 4-B12	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	0.58 %
Bradyrhizobium sp. URHD0069	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	0.58 %
Rhodomicrobium sp. Az07	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodomicrobium → unclassified Rhodomicrobium → Rhodomicrobium sp. Az07	0.58 %
Candidatus Nomurabacteria bacterium RIFCSPLOWO2_01_FULL_40_18	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Nomurabacteria → Candidatus Nomurabacteria bacterium RIFCSPLOWO2_01_FULL_40_18	0.58 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000816\|AF_2010_repII_A10DRAFT_1036060	Not Available	521	Open in IMG/M
3300001867\|JGI12627J18819_10071951	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1437	Open in IMG/M
3300004152\|Ga0062386_100579461	Not Available	916	Open in IMG/M
3300004633\|Ga0066395_10029802	Not Available	2264	Open in IMG/M
3300005175\|Ga0066673_10411706	Not Available	791	Open in IMG/M
3300005179\|Ga0066684_10022184	Not Available	3325	Open in IMG/M
3300005181\|Ga0066678_10859161	Not Available	596	Open in IMG/M
3300005187\|Ga0066675_10589134	Not Available	835	Open in IMG/M
3300005332\|Ga0066388_100005961	All Organisms → cellular organisms → Bacteria	8619	Open in IMG/M
3300005332\|Ga0066388_100678908	All Organisms → cellular organisms → Bacteria	1640	Open in IMG/M
3300005332\|Ga0066388_100822544	Not Available	1518	Open in IMG/M
3300005332\|Ga0066388_100945649	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter → unclassified Caulobacter → Caulobacter sp. S45	1433	Open in IMG/M
3300005332\|Ga0066388_108749488	Not Available	503	Open in IMG/M
3300005355\|Ga0070671_102059020	Not Available	508	Open in IMG/M
3300005363\|Ga0008090_15594548	Not Available	772	Open in IMG/M
3300005436\|Ga0070713_100085853	Not Available	2697	Open in IMG/M
3300005436\|Ga0070713_101236456	Not Available	723	Open in IMG/M
3300005439\|Ga0070711_100017232	All Organisms → cellular organisms → Bacteria → Proteobacteria	4597	Open in IMG/M
3300005574\|Ga0066694_10456721	Not Available	597	Open in IMG/M
3300005713\|Ga0066905_101147751	Not Available	692	Open in IMG/M
3300005764\|Ga0066903_100350074	Not Available	2387	Open in IMG/M
3300005764\|Ga0066903_100384357	All Organisms → cellular organisms → Bacteria	2297	Open in IMG/M
3300005764\|Ga0066903_100496010	Not Available	2066	Open in IMG/M
3300005764\|Ga0066903_101700797	All Organisms → cellular organisms → Bacteria	1201	Open in IMG/M
3300005764\|Ga0066903_106193154	Not Available	625	Open in IMG/M
3300006041\|Ga0075023_100425855	Not Available	581	Open in IMG/M
3300006052\|Ga0075029_100127347	Not Available	1550	Open in IMG/M
3300006052\|Ga0075029_100199131	Not Available	1250	Open in IMG/M
3300006057\|Ga0075026_100073178	Not Available	1657	Open in IMG/M
3300006059\|Ga0075017_101442957	Not Available	542	Open in IMG/M
3300006102\|Ga0075015_100705858	Not Available	599	Open in IMG/M
3300006163\|Ga0070715_10230076	Not Available	958	Open in IMG/M
3300006174\|Ga0075014_100033559	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → unclassified Burkholderiaceae → Burkholderiaceae bacterium	2091	Open in IMG/M
3300006755\|Ga0079222_10382826	Not Available	969	Open in IMG/M
3300006791\|Ga0066653_10432068	Not Available	672	Open in IMG/M
3300006804\|Ga0079221_10032031	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2236	Open in IMG/M
3300006806\|Ga0079220_10017290	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2964	Open in IMG/M
3300006893\|Ga0073928_10051407	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3713	Open in IMG/M
3300009137\|Ga0066709_103853846	Not Available	545	Open in IMG/M
3300010047\|Ga0126382_11112065	Not Available	701	Open in IMG/M
3300010048\|Ga0126373_10660715	Not Available	1101	Open in IMG/M
3300010358\|Ga0126370_10064455	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter → unclassified Caulobacter → Caulobacter sp. S45	2394	Open in IMG/M
3300010358\|Ga0126370_12286520	Not Available	535	Open in IMG/M
3300010359\|Ga0126376_10636556	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1015	Open in IMG/M
3300010360\|Ga0126372_10509103	All Organisms → cellular organisms → Bacteria	1133	Open in IMG/M
3300010360\|Ga0126372_13211610	Not Available	508	Open in IMG/M
3300010361\|Ga0126378_10826944	Not Available	1035	Open in IMG/M
3300010376\|Ga0126381_100138447	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3178	Open in IMG/M
3300010376\|Ga0126381_103194420	Not Available	648	Open in IMG/M
3300010398\|Ga0126383_12272229	Not Available	628	Open in IMG/M
3300010398\|Ga0126383_13647366	Not Available	503	Open in IMG/M
3300012189\|Ga0137388_11454132	Not Available	623	Open in IMG/M
3300012199\|Ga0137383_11036261	Not Available	596	Open in IMG/M
3300012285\|Ga0137370_10285329	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	983	Open in IMG/M
3300012351\|Ga0137386_11103412	Not Available	560	Open in IMG/M
3300012361\|Ga0137360_11436194	Not Available	593	Open in IMG/M
3300015373\|Ga0132257_101033109	Not Available	1035	Open in IMG/M
3300016270\|Ga0182036_10531705	All Organisms → cellular organisms → Bacteria	935	Open in IMG/M
3300016270\|Ga0182036_10600231	Not Available	882	Open in IMG/M
3300016294\|Ga0182041_10035805	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3232	Open in IMG/M
3300016294\|Ga0182041_10608153	All Organisms → cellular organisms → Bacteria	961	Open in IMG/M
3300016319\|Ga0182033_10025294	Not Available	3699	Open in IMG/M
3300016341\|Ga0182035_10326284	Not Available	1268	Open in IMG/M
3300016341\|Ga0182035_10327845	Not Available	1265	Open in IMG/M
3300016341\|Ga0182035_10377923	Not Available	1185	Open in IMG/M
3300016357\|Ga0182032_10023365	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	3646	Open in IMG/M
3300016357\|Ga0182032_10100770	All Organisms → cellular organisms → Bacteria	2038	Open in IMG/M
3300016357\|Ga0182032_11061185	Not Available	694	Open in IMG/M
3300016371\|Ga0182034_10031498	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → unclassified Burkholderiaceae → Burkholderiaceae bacterium	3317	Open in IMG/M
3300016371\|Ga0182034_10092139	All Organisms → cellular organisms → Bacteria → Proteobacteria	2145	Open in IMG/M
3300016371\|Ga0182034_10748048	Not Available	834	Open in IMG/M
3300016422\|Ga0182039_10634731	Not Available	937	Open in IMG/M
3300016422\|Ga0182039_10724721	Not Available	878	Open in IMG/M
3300016445\|Ga0182038_10094301	All Organisms → cellular organisms → Bacteria → Proteobacteria	2155	Open in IMG/M
3300017822\|Ga0187802_10000904	All Organisms → cellular organisms → Bacteria	7662	Open in IMG/M
3300017822\|Ga0187802_10011187	Not Available	2903	Open in IMG/M
3300017822\|Ga0187802_10172750	Not Available	828	Open in IMG/M
3300017927\|Ga0187824_10323159	Not Available	551	Open in IMG/M
3300017928\|Ga0187806_1366102	Not Available	517	Open in IMG/M
3300017930\|Ga0187825_10213108	Not Available	698	Open in IMG/M
3300017932\|Ga0187814_10056514	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	1443	Open in IMG/M
3300017932\|Ga0187814_10393116	Not Available	539	Open in IMG/M
3300017933\|Ga0187801_10032429	Not Available	1838	Open in IMG/M
3300017943\|Ga0187819_10800117	Not Available	529	Open in IMG/M
3300017974\|Ga0187777_10101357	All Organisms → cellular organisms → Bacteria	1892	Open in IMG/M
3300017974\|Ga0187777_10519639	Not Available	833	Open in IMG/M
3300017974\|Ga0187777_11295617	Not Available	535	Open in IMG/M
3300017993\|Ga0187823_10082677	Not Available	935	Open in IMG/M
3300017994\|Ga0187822_10001093	All Organisms → cellular organisms → Bacteria	5313	Open in IMG/M
3300018006\|Ga0187804_10050699	Not Available	1624	Open in IMG/M
3300018058\|Ga0187766_10333212	Not Available	990	Open in IMG/M
3300019887\|Ga0193729_1146184	Not Available	858	Open in IMG/M
3300019888\|Ga0193751_1000046	All Organisms → cellular organisms → Bacteria → Proteobacteria	105496	Open in IMG/M
3300019888\|Ga0193751_1003412	All Organisms → cellular organisms → Bacteria	9346	Open in IMG/M
3300020010\|Ga0193749_1004081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2796	Open in IMG/M
3300021560\|Ga0126371_10009199	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	8892	Open in IMG/M
3300021560\|Ga0126371_10066724	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodomicrobium → unclassified Rhodomicrobium → Rhodomicrobium sp. Az07	3486	Open in IMG/M
3300021560\|Ga0126371_11132070	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	921	Open in IMG/M
3300021560\|Ga0126371_13083961	Not Available	564	Open in IMG/M
3300022557\|Ga0212123_10070435	Not Available	3018	Open in IMG/M
3300022726\|Ga0242654_10259245	Not Available	626	Open in IMG/M
3300025905\|Ga0207685_10153752	Not Available	1044	Open in IMG/M
3300025915\|Ga0207693_10021443	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5133	Open in IMG/M
3300025916\|Ga0207663_10062453	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → unclassified Burkholderiaceae → Burkholderiaceae bacterium	2368	Open in IMG/M
3300025916\|Ga0207663_10267998	Not Available	1264	Open in IMG/M
3300025928\|Ga0207700_10947349	Not Available	770	Open in IMG/M
3300025929\|Ga0207664_11514495	Not Available	592	Open in IMG/M
3300027000\|Ga0207803_1024806	Not Available	745	Open in IMG/M
3300027070\|Ga0208365_1005038	Not Available	1586	Open in IMG/M
3300027090\|Ga0208604_1002609	Not Available	1684	Open in IMG/M
3300027576\|Ga0209003_1114556	Not Available	513	Open in IMG/M
3300027605\|Ga0209329_1060522	All Organisms → cellular organisms → Bacteria	813	Open in IMG/M
3300027680\|Ga0207826_1114671	Not Available	739	Open in IMG/M
3300027703\|Ga0207862_1043600	Not Available	1352	Open in IMG/M
3300027765\|Ga0209073_10516488	Not Available	505	Open in IMG/M
3300027775\|Ga0209177_10047321	Not Available	1205	Open in IMG/M
3300027882\|Ga0209590_10595595	Not Available	711	Open in IMG/M
3300027898\|Ga0209067_10540562	Not Available	665	Open in IMG/M
3300027911\|Ga0209698_11074596	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	597	Open in IMG/M
3300030969\|Ga0075394_11628650	Not Available	704	Open in IMG/M
3300031057\|Ga0170834_105805278	Not Available	624	Open in IMG/M
3300031057\|Ga0170834_106546130	Not Available	655	Open in IMG/M
3300031057\|Ga0170834_110863154	Not Available	601	Open in IMG/M
3300031128\|Ga0170823_17078539	Not Available	788	Open in IMG/M
3300031546\|Ga0318538_10322603	Not Available	833	Open in IMG/M
3300031573\|Ga0310915_10000601	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	17392	Open in IMG/M
3300031573\|Ga0310915_10111666	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → unclassified Burkholderiaceae → Burkholderiaceae bacterium	1859	Open in IMG/M
3300031682\|Ga0318560_10410553	Not Available	733	Open in IMG/M
3300031718\|Ga0307474_11208451	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	598	Open in IMG/M
3300031718\|Ga0307474_11606813	Not Available	511	Open in IMG/M
3300031719\|Ga0306917_10390876	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Nomurabacteria → Candidatus Nomurabacteria bacterium RIFCSPLOWO2_01_FULL_40_18	1085	Open in IMG/M
3300031719\|Ga0306917_10475179	Not Available	980	Open in IMG/M
3300031719\|Ga0306917_10620512	Not Available	850	Open in IMG/M
3300031744\|Ga0306918_10677684	Not Available	807	Open in IMG/M
3300031744\|Ga0306918_11021575	Not Available	642	Open in IMG/M
3300031744\|Ga0306918_11029183	Not Available	639	Open in IMG/M
3300031744\|Ga0306918_11041311	Not Available	635	Open in IMG/M
3300031747\|Ga0318502_10479836	Not Available	744	Open in IMG/M
3300031753\|Ga0307477_10017903	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4835	Open in IMG/M
3300031753\|Ga0307477_11096291	Not Available	520	Open in IMG/M
3300031754\|Ga0307475_10527496	All Organisms → cellular organisms → Bacteria	948	Open in IMG/M
3300031770\|Ga0318521_10438403	Not Available	781	Open in IMG/M
3300031823\|Ga0307478_11268165	Not Available	613	Open in IMG/M
3300031833\|Ga0310917_10513700	Not Available	815	Open in IMG/M
3300031833\|Ga0310917_11038776	Not Available	548	Open in IMG/M
3300031879\|Ga0306919_10386094	All Organisms → cellular organisms → Bacteria	1073	Open in IMG/M
3300031879\|Ga0306919_10396394	Not Available	1058	Open in IMG/M
3300031890\|Ga0306925_10483254	Not Available	1321	Open in IMG/M
3300031890\|Ga0306925_11806319	Not Available	585	Open in IMG/M
3300031890\|Ga0306925_11901423	Not Available	566	Open in IMG/M
3300031910\|Ga0306923_10178646	Not Available	2424	Open in IMG/M
3300031910\|Ga0306923_10389669	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1586	Open in IMG/M
3300031910\|Ga0306923_12220090	Not Available	550	Open in IMG/M
3300031941\|Ga0310912_11412781	Not Available	525	Open in IMG/M
3300031942\|Ga0310916_11223826	Not Available	620	Open in IMG/M
3300031945\|Ga0310913_10796534	Not Available	666	Open in IMG/M
3300031946\|Ga0310910_10647502	Not Available	837	Open in IMG/M
3300031946\|Ga0310910_11588590	Not Available	500	Open in IMG/M
3300031954\|Ga0306926_10499487	Not Available	1495	Open in IMG/M
3300031954\|Ga0306926_12334175	Not Available	592	Open in IMG/M
3300031962\|Ga0307479_10834015	All Organisms → cellular organisms → Bacteria	896	Open in IMG/M
3300032001\|Ga0306922_12081093	Not Available	551	Open in IMG/M
3300032035\|Ga0310911_10551739	Not Available	668	Open in IMG/M
3300032042\|Ga0318545_10314810	Not Available	563	Open in IMG/M
3300032055\|Ga0318575_10246030	Not Available	902	Open in IMG/M
3300032180\|Ga0307471_100879488	Not Available	1063	Open in IMG/M
3300032261\|Ga0306920_102239362	Not Available	759	Open in IMG/M
3300033289\|Ga0310914_10537339	Not Available	1056	Open in IMG/M
3300033289\|Ga0310914_10801005	All Organisms → cellular organisms → Bacteria	840	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.84%
Host-Associated	Host-Associated	1.16%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.30%
Aquatic	Environmental → Aquatic	14.53%
Plants	Host-Associated → Plants	1.16%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.30%
Freshwater	Environmental → Aquatic → Freshwater	8.14%
Sediment	Environmental → Aquatic → Sediment	5.23%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.16%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.58%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.58%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	63.37%
Loam	Environmental → Terrestrial → Soil → Loam	18.60%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	8.14%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.23%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.33%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.16%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.58%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.58%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	41.28%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.12%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.21%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	7.56%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.23%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.81%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.49%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.33%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.91%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.16%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.58%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.58%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.58%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.58%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.58%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	21.51%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.21%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.30%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	9.30%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	7.56%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	5.23%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.23%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.65%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.49%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.33%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.33%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.91%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.91%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.91%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.16%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.58%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.58%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.58%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.58%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.58%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.58%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.58%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000816	Forest soil microbial communities from Amazon forest - 2010 replicate II A10	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017993	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300020010	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1s2	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300027000	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 41 (SPAdes)	Environmental	Open in IMG/M
3300027070	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF004 (SPAdes)	Environmental	Open in IMG/M
3300027090	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF016 (SPAdes)	Environmental	Open in IMG/M
3300027576	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027605	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027680	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80 (SPAdes)	Environmental	Open in IMG/M
3300027703	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300030969	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A10DRAFT_10360602	3300000816	Forest Soil	MKRNAFALFGAVAVLLTATVALTLSRATLSEGGSNLKCYDLKGGIERCSTVDRPPLVVRTSVRHAGLD*
JGI12627J18819_100719512	3300001867	Forest Soil	MKRKVFTLFGVVAVLLTAMAALTLSRVTPSGSGIGDLKCYDIKGEIDKCSVGDRSPVIERTSVRHTRLD*
Ga0062386_1005794613	3300004152	Bog Forest Soil	MKRNVFALFGAVAVLLTATVALTLSRVTPLASGIGGLKCYDIKGGIEKCSVVDRPPLIVKTSVRHTRLD*
Ga0066395_100020072	3300004633	Tropical Forest Soil	MDRNVFAWFGVVAVLLTATVALSMSGATPFARGIGTLKCYGVTGVIEKPCDQPPHIVGVQHARSD*
Ga0066395_100298022	3300004633	Tropical Forest Soil	MTRNVFALFGSVALLLTVTLALTLSRATPFASGLGGLKCYDSNGKIEQCSAADRSAQLDQKK*
Ga0066673_104117062	3300005175	Soil	MKRNIFALFGAVAVLLTATAALTLSRGTPFATGIGTLKCYDVGAIERPCDRPPLSVRHARLD*
Ga0066684_100221845	3300005179	Soil	MKRNIFALFGAVAVLLTATAALTLSRGTPFATGIGTLKCYDVGAIEKPCDRRPLSVRHARLD*
Ga0066678_108591611	3300005181	Soil	MNRNVLALFGAVAVLLTVPVVLTLSRATPFASGIGTLKCYDVTLRWCSRFLAGAEKPCDQPPLIV
Ga0066675_105891342	3300005187	Soil	MNRNVFALFGAVAMLLTTMVVLTLSRATPFASGIGTLKCYDVTGTIEQACDRQPLIIRTGVRPS*
Ga0066388_1000059619	3300005332	Tropical Forest Soil	MNRNVFALFGAVAVLLTATVALTLFRATPLASGIGTLKCYDVIGAIEKPCDRQPPIVRTSVRNARLD*
Ga0066388_1006789082	3300005332	Tropical Forest Soil	MKRNVFALFGAVTVLLTAMAALTLSGVTPSGGGIGGLKCYDSKGGIEKCSVVDRPPLILKTSVRRSQLD*
Ga0066388_1008225443	3300005332	Tropical Forest Soil	MNRNLFALFGVVAALLTATVALTLSRATPVASGIGTLKCYDVTGTNEKPCDRQPLVRTSYDTRD*
Ga0066388_1009456492	3300005332	Tropical Forest Soil	DQSQSGDGLMKRNAFALFGVVAVLLTATAALTLSRVTPLASGIGDLKCYDIKGEIESCAVVDPQPLVVRTGVRYPRLD*
Ga0066388_1087494882	3300005332	Tropical Forest Soil	MKHNVLGLFGAVAVLLTVTAVLTLSRVTPVRSGIGDLKCYDIKGQIEKCAEAPRAYTMRN
Ga0070671_1020590202	3300005355	Switchgrass Rhizosphere	MQRKVFALFGVVAVLLTAMAALTLSRVTPLGSGIGDLKCYDIKGEIDKCSVGDRSPLVVRTSVRPTRLD*
Ga0008090_155945482	3300005363	Tropical Rainforest Soil	MKRNAFALFGAVAVLLTATVALTLSRATLSEGGSNLKCYDLKGGTERCSTVDRPPPVVRTSVRDTRLENTTTRPVAPRN*
Ga0070713_1000858535	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MNRNVFALFGAVAMLLTAPVALTLSRVAPLASGIGTLKCYDVTGAIEKPCDRQPLIVRTSVRHARLD*
Ga0070713_1012364562	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MKRNVFALFGTVAVLLTITVALTLSRATPFASGIGTLKCYDIKGAIEKPCDRPPLIVRTTVRHAGLN*
Ga0070711_1000172326	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MNRNVFALFGAVAMLLTATVALTLSRATPFASGIGTLKCYDVTGAIEKPCDRQPLIVKTSVRHARLD*
Ga0066694_104567211	3300005574	Soil	MSRNVFALFGVVAVLLTATAALTLSRATRSEVRDNLKCYDLKGGIEKCSTVDRPSQVERTSLRHAGLD*
Ga0066905_1011477511	3300005713	Tropical Forest Soil	MKRNVFALFGAVTVLLTAMAALTLSGVTPSGGGIGGLKCYDSKGGIEKCSVVDRPPLILKTSVRRS
Ga0066903_1003500743	3300005764	Tropical Forest Soil	MNRNVFALFGAVALLLTGTVALALSRATLSASGIGTLKCYDVTGAIERPCDRSPHARSD*
Ga0066903_1003843572	3300005764	Tropical Forest Soil	MKRNVFALFGAVTVLLTAMAALTLSRVTPSGGGIGGLKCHDSKGGIEKCSVVDRPPLILKTSVRRSQLD*
Ga0066903_1004960104	3300005764	Tropical Forest Soil	MNRNVFALFGAVAVLLTATVALTLSRATPFASGIGGLKCYDIKGGIEKCSGVDRPPPSVRHARLD*
Ga0066903_1017007971	3300005764	Tropical Forest Soil	MTRNVFALFGSVALLLTVTLALTLSRAAPFANGLGGLKCYDSNGKIEQCSAADRSAQLDQKK*
Ga0066903_1061931542	3300005764	Tropical Forest Soil	GLMTRNVFALFGSVALLLTVTLALTLSRATPFASGLGGLKCYDSNGKIEQCSAADRSAQLDQKK*
Ga0075023_1004258551	3300006041	Watersheds	MRRSLFRPMALFGAAVVMLAAIVAVSRATLSASGIGLLKCYDVTGGIEKPCDQPPLIVRTSVRDARLD*
Ga0075029_1001273471	3300006052	Watersheds	MKRNVFALFGAVAVLLTATVALTFSRVTPLASGIGGLKCYDIKGGIEKCSVVDRPPLIVKTSVRHTRLD*
Ga0075029_1001991312	3300006052	Watersheds	MNRNVFALFGAVAMLLTATVALTLSRATPFASGIGTLKCYDVTGAIEKPCDRQPLIVRTGVRHARLD*
Ga0075026_1000731784	3300006057	Watersheds	MNRNVFALFGAVAMLLTATVALTLSRATPFASGIGTLKCYDVTGAIEKPCDRQPLIVRTSVRHARLD*
Ga0075017_1014429573	3300006059	Watersheds	MKRNVFGLFGLVAVITAVLVLTPSPATPVASGIGTLKCYAGVIEKPCDRPPLITRISDAQSD*
Ga0075015_1007058581	3300006102	Watersheds	MNRNVFALFGAVAVLLTVPVVLTLSRATPFASGIGTLKCYDVTGSIKKPCDQPPLIVRTSARSARLD*
Ga0070715_102300764	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	SGDGLMNRNVFALFGAVAMLLTATVALTLSRATPFASGIGTLKCYDVTGAIEKPCDRQPLIVRTSVRHARLD*
Ga0075014_1000335594	3300006174	Watersheds	RNVFALFGAVAMLLTATVALTLSRATPFASGIGTLKCYNVTGAIEKPCDRQPLIVRTGVRHARLD*
Ga0079222_103828262	3300006755	Agricultural Soil	MKRIALFGAAAVLLTVTVALTLSRAPSEGHSNLKCYDLKGGIAKCSTVERPPVVVRTNARMRD*
Ga0066653_104320681	3300006791	Soil	LVKHNVFALFGVVAALLTATAAITLSRTAPVADGVGNLKCYAGAIEKPCDRPSLIIRTSDARSD*
Ga0079221_100320313	3300006804	Agricultural Soil	MQRKVFALFGVVAVLLTAMAALTLSRVTPLGSGIGDLKCYDIKGEIDKCAVGDRSPLVVR
Ga0079220_100172901	3300006806	Agricultural Soil	MQRKVFALFGVVAVLLTAMAALTLSRVTPLGSGIGDLKCYDIKGEIDKCSVGDRSPLVVRTSVRPTR
Ga0073928_100514077	3300006893	Iron-Sulfur Acid Spring	MNRNLLRPMALFGAVALMLTATAALTLSRATLFASGIGTLKCYDTKGGIERCSVVDQPPIIVKAIVHHKRLD*
Ga0066709_1038538461	3300009137	Grasslands Soil	MKRNVFVLFRAVAVLLTATAALTLSRVTPLGSGIGALKCYDIKGGIEKCSVVDRPPLIVRRVIAESW*
Ga0126382_111120652	3300010047	Tropical Forest Soil	MKRNVFALFGAVTVLLTAMAALTLSRVTPSGGGIGGLKCYDSKGGIEKCSVVDRPPLTLKTSVRRSQLD*
Ga0126373_106607152	3300010048	Tropical Forest Soil	MNRNVFALFGAVAVLLTATVALALSRATPFATGIGGLKCYDIKGGIEKCSGADRPPPSVRHARLD*
Ga0126370_100644553	3300010358	Tropical Forest Soil	MKRNAFALFGVVAVLLTATAALTLSRVTPLASGIGDLKCYDIKGEIESCAVVDPQPLVVRTGVRYPRLD*
Ga0126370_122865201	3300010358	Tropical Forest Soil	MKRNVFALFGAVTVLLTAMAALTLSGVTPSGSGIGGLKCYDSKGGIEKCSVVDRPPLILKTSVRRSQLD*
Ga0126376_106365563	3300010359	Tropical Forest Soil	MKRNVFALFGAVTVLLTAMAALTLSGVTPSGGGIDGLKCYDSKGGIEKCSVVDRPPLILKTSVRRSQLD*
Ga0126372_105091032	3300010360	Tropical Forest Soil	MKRNTFALFGAVAVLLTATIALTLSRAMPFASGIGTLKCYNLTGGTEKCSVVDRPPMIVLTRHARLD*
Ga0126372_132116101	3300010360	Tropical Forest Soil	ALFGVVAVLLTATVALTLSRATLSEGRGNLKCYDLKGRIEKCSTVDRPPLIVRTSAATSD
Ga0126378_108269441	3300010361	Tropical Forest Soil	MKRNAFALFGAVAVLLTATVALTLSRATLSEGGSNLKCYDLKGGIERCSTVDRPPLVVRTSVRHAAGLD*
Ga0126381_1001384471	3300010376	Tropical Forest Soil	MKRNALALFGVVAVLLTATVALTLSRATLSEGGSNLKCYDLKGGIERCSTVDRSPLVVRTSVRHAGLD*
Ga0126381_1031944201	3300010376	Tropical Forest Soil	MTRNVFALFGSVALLLTVTLAVTLSRATPFASGLGGLKCYDSNGKIKQCSAAHRSAQLDQKK*
Ga0126383_122722291	3300010398	Tropical Forest Soil	NAFALFGVVAVLLTATVALTLSRATLSEGGSNLKCYDLKGGIERCSTVDRSPLVVRTSVRHAGLD*
Ga0126383_136473662	3300010398	Tropical Forest Soil	AALLTATVALTLSRAAPLPSGIGTLRCYDVDVAGAIEKPCDQKPLIVRTSARAVRLD*
Ga0137388_114541321	3300012189	Vadose Zone Soil	MDRNVFALFGAVATLLTITVVLTLSRATPFASGIGTLKCYDVTGTEKPCDQPPLIVRTSARPARLD*
Ga0137383_110362611	3300012199	Vadose Zone Soil	RNVFVLFRAVAVLLTATAALTLSRVTPLGSGIGALKCYDIKGGIEKCSVVDRPPLIVRTSVSHTRLD*
Ga0137370_102853292	3300012285	Vadose Zone Soil	MNRNVFALFGAVAVLLTVPVVLTLSRATPFASGIGTLKCYDVTGAEKPCDQAPLIVRTSARSARLD*
Ga0137386_111034121	3300012351	Vadose Zone Soil	MNRNVFALFGAVAVLLTVPVVLTLSRATPFASGIGTLKCYDVTGAIEKPCDQPPLIVRTSADLRD*
Ga0137360_114361941	3300012361	Vadose Zone Soil	MNRNVFALFGAVAVLLTVPVVLTLSRATPFASGIGTLKCYDVTGSIKKPCDQPPLIVRTSARPARLD*
Ga0132257_1010331092	3300015373	Arabidopsis Rhizosphere	VKHNVFALFGVVAALLTPTVALTLSRATPVADGVGNLKCYAGATEKPCDRPQLIRTSAAQSD*
Ga0182036_105317051	3300016270	Soil	QSQSGDGLMKRNVFALFGAVAVLLTATAALTLSRVTPLGSGIGDLKCYDIKGEVEKCSVVDRSYAARLDNIT
Ga0182036_106002311	3300016270	Soil	ALFGAVAVLLTATVALTLSRATPFATGVGGLKCYDIKGGIEKCSGVDRPSPSIRHARLD
Ga0182041_100358051	3300016294	Soil	MNRNVLALFGAVAVLLTATVALTLSRGTPFATGLGTLKCYDGAIEKPCDRPPLIVRTSVRHARLD
Ga0182041_106081532	3300016294	Soil	QSGDGLMKRNTFALFGAVAVLLTATMALTLSRAMPFASGIGTLKCYNLTGGTEKCSVVDRPPMIVLTRHARLD
Ga0182033_100252942	3300016319	Soil	MNRNVFALFGAVAVLLTATVALTLSRGTPFATGLGTLKCYDGAIEKPCDRPPLIVRTSVRHARLD
Ga0182035_103262843	3300016341	Soil	VVAAPDWGDKLIQSEQVGGRLMKRSVFALFGVVAVLLTATVALTLSRATPFGSGIGGLKCYDVKGEIEKCSGVDRAPLSHHARLD
Ga0182035_103278452	3300016341	Soil	MKRNVFALFGAVAVLLTATAALTLSRVTPLGSGSGGLKCYDIKGEIEKCSGMDRPPSPEIKSHARLD
Ga0182035_103779232	3300016341	Soil	MNRKVFALFGAVAVLLTATVALTLSRATPFASGIGGLKCYDIKGGIEKCSGVDRPSPSIRHARLD
Ga0182032_100233652	3300016357	Soil	MNRNVFALFGAVAVLLTATVALTLSRGTPFATGLGTLKCYDGAIERPCDRPPLIVRTSVRHARLD
Ga0182032_101007702	3300016357	Soil	MKRNTFALFGAVAVLLTATMALTFSRAMPFASGIGTLKCYNLTGGTEKCSVVDRPPMIVLTRHARLD
Ga0182032_110611851	3300016357	Soil	SQSGDGLMKRNVLALFGAVAVLLTATAALTLSRVTPLGSGIGDLKCYDIKGEIEKCSVVDRPPLTVRTRVSRSRLD
Ga0182034_100314982	3300016371	Soil	MKRNTFALFGAVAVLLTATIALTLSRAMPFASGIGTLKCYNLTGGIEKCSVVDRPPMIVLTRHARLD
Ga0182034_100921392	3300016371	Soil	MTRNVFALFGSVALLLTVTLALTLSRATPFASGLGGLKCYDINGKIEPCSAADRSAQLDQKK
Ga0182034_107480481	3300016371	Soil	MNRDVFTLFGVVAALLTATVALALSRATPLPSGIGTLKCYDVDVAGAIEKPCDRQSLIVRTSVRAARLD
Ga0182039_106347311	3300016422	Soil	MNRNVFALFGAVAVLLTATAALTLSRVTPLGSGSGGLKCYDIKGEIEKCSGRDRLPSIEIKSHARLD
Ga0182039_107247211	3300016422	Soil	MNRKVFALFGAVAVLLTATVALALSRATPFASGIGGLKCYDVKGEIEKCSGVDRAPLSHHARLD
Ga0182038_100943012	3300016445	Soil	MKRNTFALFGAVAVLLTATMALTLSRAMPFASGIGTLKCYNLTGGIEKCSVVDRPPMIVRHARLH
Ga0187802_100009045	3300017822	Freshwater Sediment	MKRNVFALFGAVAVLLTATVALTFSRVTPLASGIGGLKCYDIKGGIEKCSVVDRQPLIVKTSVRHTRLD
Ga0187802_100111874	3300017822	Freshwater Sediment	MNRNVFVLFGAVAMLLTATVALTLSRATPFASGIGTLKCYDVTGAIEKPCDQQPLIVRTSIRHARLD
Ga0187802_101727501	3300017822	Freshwater Sediment	MNRDVFTLFGVVAALLTATVALTLSRATPLPSDIGTLKCYDVDVAGAIEKPCDRQPLIVRTSARAARLD
Ga0187824_103231592	3300017927	Freshwater Sediment	MKRNVFALFGAVAVLLTATVALTFSRVTPLASGIGGLKCYDIKGGIEKCSVADRQPLIVKTSVRHTRLD
Ga0187806_13661022	3300017928	Freshwater Sediment	MKRNVFALFGAVAVLLTATVALTFSRVTPLASGIGGLKCYDIKGGIEKCSVVDRQPLIVKTGVRHTRLD
Ga0187825_102131083	3300017930	Freshwater Sediment	MNRNVFVLFGAVAMLLTATVVLTLSRATPFARGIGTLKCYDIKGAIEKCSVVDRPPLTRRARLD
Ga0187814_100565141	3300017932	Freshwater Sediment	MNRDVFTLFGVVAALLTATVALTLSRAAPLPSGIGTLKCYDVDVAGAIEKPCDRQPLIVRTSARAARLD
Ga0187814_103931161	3300017932	Freshwater Sediment	MNRNVFVLFGAVAMLLTATVALTLSRATPFASGIGTLKCYDVTGAIEKPCDQQPLIVRTRIRHAR
Ga0187801_100324294	3300017933	Freshwater Sediment	MNRNVFVLFGAVAMLLTATVALTLSRATPFASGIGTLKCYDVTGAIEKPCDQQPLIVRTRIRHARLD
Ga0187819_108001172	3300017943	Freshwater Sediment	MNRNVFVLFGAVAMLLAATVVLTLSRATPFASGIGTLKCYDVTGAIEKPCDQQPLIVRTRIRHARLD
Ga0187777_101013572	3300017974	Tropical Peatland	MRRNVFALFGVVAVLLTATAALTLSRVTPLGSGIGDLKCYDIKGEIEKCSTVDRPPLIVRTSVRRT
Ga0187777_105196391	3300017974	Tropical Peatland	MARNVFALFSAATVLLTATVALTLSRATPVPSGIGTLKCYGVPGMIEKPCDQPPVIISAQHARQTR
Ga0187777_112956172	3300017974	Tropical Peatland	MKHNAFALFGAVAVLLTATAALTLSRVTPLGRGIGDLKCYDIKGEIEKCSTVDRPPLIVRSSARRARLD
Ga0187823_100826772	3300017993	Freshwater Sediment	QSQSGDGLMKRNVFALFGAVAVLLTATVALTFSRVTPLASGIGGLKCYDIKGGIEKCSVVDRQPLIVKTSVRHTRLD
Ga0187822_100010935	3300017994	Freshwater Sediment	MRNVFALFGAVAVLLTATVALTFSRVTPLASGIGGLQCYDIKGGIKKCSVVDRQPLIVKTSVRHTRLD
Ga0187804_100506992	3300018006	Freshwater Sediment	MNRNVFALFGGVAMLLTATVALTLSRATPFASGIGTLKCYDVTGAIEKPCDQQPLITPRATRLENITTTLVASHNKTRE
Ga0187766_103332122	3300018058	Tropical Peatland	MKRNVFALFGAVAVLLTATVALTLSRATLSESNSNLKCYDLKGGIAKCSTVDRAPLLVRTSARLRD
Ga0193729_11461842	3300019887	Soil	MKRNVFGLFGLVALITAALVLTPSPATPVASGIGTLKCYAGVIEKPCDRPPLITRISDAQ
Ga0193751_100004695	3300019888	Soil	MKRNVFALFEAVTVLLTATIALTLSRAAPFASGIGGLKCYDVKGGIEKCSVVDQPPFIVRTSVRHTRLD
Ga0193751_10034127	3300019888	Soil	MNRNVFALFAVVVLLLTATVAKTLSRATLFASGIGALKCYDVTGAIEKCDRPPLIVKTSVRDGPLD
Ga0193749_10040816	3300020010	Soil	WCGRLIQQSQSGDGLMKRNVFALFEAVTVLLTATIALTLSRAAPFASGIGGLKCYDVKGGIEKCSVVDQPPFIVRTSVRHTRLD
Ga0126371_100091998	3300021560	Tropical Forest Soil	MNRNAFALFGAVAVLLTATVALTLSRATLSEGGSNLKCYDLKGGIERCSTVDRPPLVVRTSVRHAGLD
Ga0126371_100667242	3300021560	Tropical Forest Soil	MNRNVFALFGAVAVLLTATVALALSRATPFATGIGGLKCYDIKGGIEKCSGADRPPPSVRHARLD
Ga0126371_111320702	3300021560	Tropical Forest Soil	MKHNVLGLFGAVAVLLTVTAALTLSRVTPVWSGIGDLKCYDIKGQIEKCAEAPRAYTMRN
Ga0126371_130839611	3300021560	Tropical Forest Soil	MKRNVFALFGAVTVLLTAMAALTLSRVTPSGGGIGGLKCYDSKGGIEKCSVVDRPTFILKTSVRRSRLD
Ga0212123_100704356	3300022557	Iron-Sulfur Acid Spring	MNRNLLRPMALFGAVALMLTATAALTLSRATLFASGIGTLKCYDTKGGIERCSVVDQPPIIVKAIVHHKRLD
Ga0242654_102592451	3300022726	Soil	DGLMNRNVFALFGAVAMLLTATVALTLSRATPFASGIGTLKFYDVAGAIEKPCDRQPLIARTSVRHARLD
Ga0207685_101537521	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MNRNVFALFGAVAMLFTVTVVLTLSRATPFASGIGTLKCYDVTGAEKPCDQPPLIVRTSARPARLD
Ga0207693_100214437	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MKRKVFGLFGVVAVLLAATAALTLSRVTPLGSGIGDLKCYDIKGEIDKCSVGDRSPLMVRTSVRHTRLDEIR
Ga0207663_100624534	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MNRNVFALFGAVAMLLTATVALTLSRATPFASGIGTLKCYDVTGAIEKPCDRQPLIVKTSVRHARLD
Ga0207663_102679981	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MNRNVFALFGAVAMLLTVTVVLTLSRATPFASGIGTLKCYDVTGAEKPCDQPPLIVRTSARPARLD
Ga0207700_109473492	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MKRNVFALFGTVAVLLTITVALTLSRATPFASGIGTLKCYDIKGAIEKPCDRPPLIVRTTVRHAGLN
Ga0207664_115144951	3300025929	Agricultural Soil	MNRNVFALFGAVAMLLTATVALTLSRATPFASGIGTLKCYDVTGAEKPCDQPPLIVRTSARPARLD
Ga0207803_10248062	3300027000	Tropical Forest Soil	MQRNVFALFGVVAVLLTATAALTLSRVTPLGSGIGDLKCYDIKGEIEKCSTVDRPPLIVRTSVRRTRLD
Ga0208365_10050381	3300027070	Forest Soil	MKRNVFELFGLVAVITAALVLTLSPATPDASGIGTLKCYAGVIEKPCDRPPLITRIITRISDAQSD
Ga0208604_10026093	3300027090	Forest Soil	MNRKVFALFGVVAVLLTAMAALTLSRVTPLGSGIGDLKCYDIKGEIDKCSVADRSPVRTSVRHTRLD
Ga0209003_11145561	3300027576	Forest Soil	MKRKVFTLFGVVAVLLIAMAALTLSRVTPSGSGIGDLKCYDIKGEIDKCSVGDRSPVIERTSVRHTRLD
Ga0209329_10605221	3300027605	Forest Soil	MRRSLFRPMALFGAAVVMLAAIVAVSRATLSASGIGLLKCYDVTGGIEKPCDQPPLIVRTSVRDARLD
Ga0207826_11146711	3300027680	Tropical Forest Soil	MKRNVFALFGAVAVLLTATAALTLSRVTPLGSGSGGLKCYDIKGEIEKCSGMDRPPSIEIKSHARLD
Ga0207862_10436003	3300027703	Tropical Forest Soil	MKRNVFALFGAVAVLTLSRVTPLGSGIGGLKCYDIKGEIEKCSGMDRPPSIEIKSHARLD
Ga0209073_105164882	3300027765	Agricultural Soil	LMKRIALFGAATVLLTVTVALTLSRAPSEGHSNLKCYDLKGGIAKCSTVERPPVVVRTNARMRD
Ga0209177_100473212	3300027775	Agricultural Soil	MQRKVFALFGVVAVLLTAMAALTLSRVTPLGSGIGDLKCYDIKGEIDKCSVGDRSPLVVRTSVRPTRLD
Ga0209590_105955952	3300027882	Vadose Zone Soil	VIESLNQSQSGDGLMKRNVFVLFRAVAVLLTATAALTLSRVTPLGSGIGALKCYDIKGGIEKCSVVDRPPLIVRTSVSHTRLD
Ga0209067_105405621	3300027898	Watersheds	MKRNVFALFGAVAVLLTATVALTLSRVTPLASGIGGLKCYDIKGGIEKCSVVDRPPLIVKTSVRHTRLD
Ga0209698_110745962	3300027911	Watersheds	MRRSLFRPMALFGAAVVMLAAIVAVSRATLSASGIGLLKCYDVTGGIEKPCDQPPLIVR
Ga0075394_116286502	3300030969	Soil	MNRNVFALFGAVAMLLTAPVALTLSRVAPLASGIGTLKCYDVTGAIEKPCDRPPLIVRTSVRHARLD
Ga0170834_1058052781	3300031057	Forest Soil	MKRNLFALFGAVAVLLTATMVLTLSRVTPFTSGIDTLRCYDIKGALEKCADQPPLIARTSVRHMRLD
Ga0170834_1065461301	3300031057	Forest Soil	MNRNVLALFGAVAMLLTATVALTLSRATPFASGIGTLKCYDVKAIEKPCDRPPLIVRTSVRHARLD
Ga0170834_1108631541	3300031057	Forest Soil	MRRCLFRPMVLFGAAVVMLAAIVAVSRATLSASGIGLLKCYDVTGGIEKPCDQPPLIVRTSVRDARLD
Ga0170823_170785391	3300031128	Forest Soil	MNRNVLALFGAVAMLLTATVALTLSRDTPFASGIGTLKCYDVRAIEKPCDRPPLIVRTSV
Ga0318538_103226031	3300031546	Soil	MNRDVFTLFGVVAALLTAMVALTLSRAAPLPSGIGTLKCYDVDVAGAIEKPCDRQSLIVRTSVRAARLD
Ga0310915_100006016	3300031573	Soil	MNRNVFALFGAVAVLLTATVALTLFRATPLASGIGTLKCYDVIGAIEKPCDRQPPIVRTSVRNARLD
Ga0310915_101116662	3300031573	Soil	MKRNTFALFGAVAVLLTATMALTLSRAMPFASGIGTLKCYNLTGGTEKCSVVDRPPMIVLTRHARLD
Ga0318560_104105531	3300031682	Soil	MKRNTFALFGAVAVLLTATMALTLSRAMPFASGIGTLKCYNLTGGIEKCSVVDRPPMIVLTRHARLD
Ga0307474_112084512	3300031718	Hardwood Forest Soil	MKRNVFELFGLVAVITAALVLTLSPATPVASGIGALKCYAGVIEKPCDRPPLITRISDAQSN
Ga0307474_116068131	3300031718	Hardwood Forest Soil	MALFGAAVVMLAAIVAVTLSRATLSASGIGLLKCYDVTGGIEKPCDQPPLIVRTSVRDARLD
Ga0306917_103908762	3300031719	Soil	MTRNVFALFGSVALLLTVTLALTLSRAAPFANGLGGLKCYDSNGKIEQCSAADRSAQLDQ
Ga0306917_104751791	3300031719	Soil	MNRNLFALFGAVAALLTATVALTLSRTTPFASGVGTLKCYDVMGAIEKPCDRQPLVARTSVRNARLD
Ga0306917_106205121	3300031719	Soil	MNRNVFALFGAVAVLLTATVALTLSRGTPFATGLGTLKCYDGAIERPCDRPPLIVRTSDR
Ga0318501_106480801	3300031736	Soil	VVLLTVTVALTLSRATPFASGIGTLKCYDTKGAIEKPCDRSPLIVRTSVRHAGLN
Ga0306918_101340021	3300031744	Soil	GVVLLTVTVALTLSRATPFASGIGTLKCYDTKGAIEKPCDRSPLIVRTSVRHAGLN
Ga0306918_106776841	3300031744	Soil	MKRNVFALFGAVAVLLTATAALTLSRVTPLGSGSGGLKCYDIKGEIEKCSGMDR
Ga0306918_110215752	3300031744	Soil	MNRNVLALFGAVAVLLTATVALTLSRGTPFATGIGTLKCYDVGAIERPCDRPPLSVRHARLD
Ga0306918_110291831	3300031744	Soil	MKRNVLALFGAVAVLLTATAALTLSRVTPLGSGIGDLKCYDIKGEVEKCSVVDRPPLTVR
Ga0306918_110413111	3300031744	Soil	MNRNVFALFGAVAMLLTATVALTLSRATPFASGIGGLKCYDIKGGIEKCSGVDRPPPSVRHARLD
Ga0318502_104798362	3300031747	Soil	MNRNVFALFGAVAVLLTATVALTLSRGTPFATGLGTLKCYDGAIERPCDRPPLIVRTSDRHARLD
Ga0307477_100179032	3300031753	Hardwood Forest Soil	MNRKVFALFGVVAVLLTAMAALTLSRVTPLGSGIGDLKCYDIKGEIDKCSVENRSPLMVRTSVRHTRLD
Ga0307477_110962911	3300031753	Hardwood Forest Soil	MRRCLFRPMVLFGAAVMMLAAIVAVSRATLSASGIGLLKCYDVTGGIEKPCDQPPLIVRNSVRDARLD
Ga0307475_105274962	3300031754	Hardwood Forest Soil	MRRSLFRPMALFGAAVVMLAAIVAVTLSRATLSASGIGLLKCYDVTGGIEKPCDQPPLIVRTSVRDARLD
Ga0318521_104384031	3300031770	Soil	MKRNMFALFGAVAVLLTATMALTLSRAMPFASGIGTLKCYNVTSEIEKCSVVD
Ga0307478_112681651	3300031823	Hardwood Forest Soil	KRNVFELFGLVAVITAAFVLTLSPATPVASGIGTLKCYVGVIEKPCDRPPLITRISDAQS
Ga0310917_105137002	3300031833	Soil	MKRNVFALFGAVAVLLTATAALTLSRVTPLGSGSGGLKCYDIKGEIEKCSGLDRPPSIEIKNHARLD
Ga0310917_110387762	3300031833	Soil	MKRNVLALFGAVAVLLTATAALTLSRVTPLGSGIGDLKCYDIKGEVEKCSVVDRSYA
Ga0306919_103860943	3300031879	Soil	GQSGDGLMTRNVFALFGSVALLLTVTLALTLSRAAPFANGLGGLKCYDSNGKIEQCSAADRSAQLDQKK
Ga0306919_103963942	3300031879	Soil	MKRNVLALFGAVAVLLTATAALTLSRVTPLGSGIGDLKCYDIKGEVEKCSVVDRPPLTVRTSR
Ga0306925_104832542	3300031890	Soil	MTRNVFALFGSVALLLTVTLALTLSRAAPFANGLGGLKCYDSNGKIEQCSAADRSAQLDQKK
Ga0306925_118063192	3300031890	Soil	MKRNVLALFGAVAVLLTATAALTLSRVTPLGSGIGDLKCYDIKGEVEKCSVVDRPPLTVRTSRTRL
Ga0306925_119014231	3300031890	Soil	LFGAVAVLITATAALTLSRVTPVGSGSGGLKCYDIKGEIEKCSGMDRPPPIEIKSHARLD
Ga0306923_101786464	3300031910	Soil	MKRNVFALFGAVAVLLTATAALTLSRVTPLGSGSGGLKCYDIKGEIEKCSGLDRPPSIEIKSHARLD
Ga0306923_103896693	3300031910	Soil	MKRNTFALFGAVAVLLTATMALTFSRAMPFASGIGTLKCYNLTGGIEKCSVADRPYSHAMRD
Ga0306923_122200901	3300031910	Soil	FGVVAALLTAMVALTLSRAAPLPSGIGTLKCYDVDVAGAIEKPCDRQSLIVRTSVRAARL
Ga0310912_114127812	3300031941	Soil	MKRNVLALFGAVAVLLTATAALTLSRVTPLGSGIGDLKCYDIKGEVEKCSVVDRP
Ga0310916_112238261	3300031942	Soil	GDGLMKRNVLALFGAVAVLLTATAALTLSRVTPLGSGIGDLKCYDIKGEVEKCSVVDRPPLTVRTSRTRLD
Ga0310913_107965342	3300031945	Soil	VIELRNQGQSGDGLMKRNLFALFGAVAVLLTATAALTLSRVTPLGSGIGDLKCYDIKGEIEKCSVVDRPPLTVRTRVSRSRLD
Ga0310910_106475021	3300031946	Soil	MKRNVFTLFGAVAVLLTATAALTLSRVTPLGSGSGGLKCYDIKGEIEKCSGMDRPPSIEIKSHARLD
Ga0310910_115885902	3300031946	Soil	MTRNVFALFGSVALLLTVTLALTLSRAAPFANGLGGLKCYDSDGKIEQCSAADRSAQLDQKK
Ga0306926_104994872	3300031954	Soil	MNRKVFALFGAVAVLLTATVALTLSRATPFASGIGGLKCYDIKGGIEKCSGVDRPPPSVRHARLD
Ga0306926_123341751	3300031954	Soil	MNRKVFALFGAVAVLLPATVALTLSRATPFASGIGGLKCYDVKGEIEKCSGVDRAPLSHHARLD
Ga0307479_108340151	3300031962	Hardwood Forest Soil	KVFALFGVVAVLLTAMAALTLSRVTPLGSGIGDLKCYDIKGEIDKCSVENRSPLMVRTSVRHTRLD
Ga0306922_120810931	3300032001	Soil	MNRKVFALFGAVAVLLTATVALTLSRATPFASGIGGLKCYDVKGEIEKCSGVDRAPLSHHARLD
Ga0310911_105517392	3300032035	Soil	MKRNTFALFGAVAVLLTATMALTLSRAMPFASGIGTLKCYNLTGGTEKCSVVDR
Ga0318545_103148101	3300032042	Soil	SGDGLVKHNIFALFGAVALLLSATVVLTLSRATPFASGIGGLKCYDINGRIEKCSVADRPPVIVRTSVRHTPPD
Ga0318575_102460302	3300032055	Soil	MKRNTFALFGAVAVLLTATMALTLSRAMPFASGIGTLKCYNLTGGTEKCSVVDRPPMIVLTR
Ga0307471_1008794882	3300032180	Hardwood Forest Soil	MNRKVFALFGVVAVLLSAMAALTLSRVTPLGSGIGDLKCYDIKGEIDKCSVENRSPLMVRTSVRHTRLD
Ga0306920_1022393621	3300032261	Soil	NRKVFALFGAVAVLLPATVALTLSRATPFASGIGGLKCYDVKGEIEKCSGVDRAPLSHHARLD
Ga0310914_105373391	3300033289	Soil	MKRNVLALFGAVAVLLTATAALTLSRVTPLGSGIGDLKCYDIKGEIEKCSVVDRPPLTVR
Ga0310914_108010051	3300033289	Soil	MNRNVFALFGVVAALLTATVALTLSRATPLPSGIGTLKCYDVDVAGAIEKPCDRQSLIVRTSVRAARLD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F035516

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences