Metagenome / Metatranscriptome Family F035521

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F035521
Family Type	Metagenome / Metatranscriptome
Number of Sequences	172
Average Sequence Length	42 residues
Representative Sequence	IKPGEEIHLGAGQRFRVLDVVPFDEEDESPFVGLLQIEAA
Number of Associated Samples	113
Number of Associated Scaffolds	171

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	39.88 %
% of genes near scaffold ends (potentially truncated)	37.79 %
% of genes from short scaffolds (< 2000 bps)	85.47 %
Associated GOLD sequencing projects	107
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.50

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (69.186 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (18.605 % of family members)
Environment Ontology (ENVO)	Unclassified (23.256 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (58.140 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 30.88% Coil/Unstructured: 69.12%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.50
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.50
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 171 Family Scaffolds
PF13473	Cupredoxin_1	2.92
PF14019	DUF4235	2.34
PF00571	CBS	1.75
PF07885	Ion_trans_2	1.17
PF00565	SNase	1.17
PF04545	Sigma70_r4	1.17
PF07366	SnoaL	1.17
PF03793	PASTA	1.17
PF00989	PAS	0.58
PF00912	Transgly	0.58
PF14572	Pribosyl_synth	0.58
PF02494	HYR	0.58
PF03795	YCII	0.58
PF14446	Prok-RING_1	0.58
PF00140	Sigma70_r1_2	0.58
PF08281	Sigma70_r4_2	0.58
PF13602	ADH_zinc_N_2	0.58
PF04542	Sigma70_r2	0.58
PF00392	GntR	0.58
PF00589	Phage_integrase	0.58
PF13668	Ferritin_2	0.58
PF13560	HTH_31	0.58
PF13229	Beta_helix	0.58
PF04906	Tweety	0.58
PF04326	AlbA_2	0.58
PF07690	MFS_1	0.58
PF10083	DUF2321	0.58
PF05103	DivIVA	0.58
PF00300	His_Phos_1	0.58

COG ID	Name	Functional Category	% Frequency in 171 Family Scaffolds
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	1.17
COG0744	Penicillin-binding protein 1B/1F, peptidoglycan transglycosylase/transpeptidase	Cell wall/membrane/envelope biogenesis [M]	0.58
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.58
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.58
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.58
COG2865	Predicted transcriptional regulator, contains HTH domain	Transcription [K]	0.58
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.58
COG4953	Membrane carboxypeptidase/penicillin-binding protein PbpC	Cell wall/membrane/envelope biogenesis [M]	0.58
COG5009	Membrane carboxypeptidase/penicillin-binding protein	Cell wall/membrane/envelope biogenesis [M]	0.58

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.19 %
All Organisms	root	All Organisms	30.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.19 %
cellular organisms	root	All Organisms → cellular organisms	30.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.19 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	30.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.19 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	24.42 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.19 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	23.26 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.19 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	19.77 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1.16 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.19 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	16.86 %
Jiangellales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales	0.58 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.58 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.58 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.19 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	16.86 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.58 %
Jiangellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales → Jiangellaceae	0.58 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	0.58 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.19 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	16.86 %
Jiangella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales → Jiangellaceae → Jiangella	0.58 %
Virgisporangium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Virgisporangium	0.58 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	0.58 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.19 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	16.86 %
Virgisporangium ochraceum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Virgisporangium → Virgisporangium ochraceum	0.58 %
Jiangella mangrovi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales → Jiangellaceae → Jiangella → Jiangella mangrovi	0.58 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	0.58 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.58 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2166559005\|cont_contig70108	Not Available	743	Open in IMG/M
2170459002\|F0B48LX02HPNDA	Not Available	541	Open in IMG/M
2170459003\|FZ032L002HVOPW	Not Available	523	Open in IMG/M
2170459023\|GZGNO2B01DCPDO	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
2189573000\|GPBTN7E01BQZYJ	Not Available	521	Open in IMG/M
2189573001\|GZR05M101A050V	Not Available	514	Open in IMG/M
2189573002\|GZIGXIF02IR83O	Not Available	531	Open in IMG/M
2189573003\|GZIR7W402JEBQZ	Not Available	548	Open in IMG/M
3300000956\|JGI10216J12902_100671097	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2029	Open in IMG/M
3300000956\|JGI10216J12902_114602920	Not Available	806	Open in IMG/M
3300001535\|A3PFW1_10533175	Not Available	806	Open in IMG/M
3300001535\|A3PFW1_10615084	Not Available	512	Open in IMG/M
3300001536\|A1565W1_10036262	All Organisms → cellular organisms → Bacteria	1104	Open in IMG/M
3300001536\|A1565W1_10083813	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2589	Open in IMG/M
3300002568\|C688J35102_118903785	Not Available	611	Open in IMG/M
3300002568\|C688J35102_120949224	All Organisms → cellular organisms → Bacteria	2854	Open in IMG/M
3300004114\|Ga0062593_100578279	Not Available	1065	Open in IMG/M
3300004156\|Ga0062589_100206203	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1425	Open in IMG/M
3300004156\|Ga0062589_100929386	Not Available	804	Open in IMG/M
3300004157\|Ga0062590_100492889	Not Available	1041	Open in IMG/M
3300004157\|Ga0062590_100666759	Not Available	929	Open in IMG/M
3300004157\|Ga0062590_101909706	Not Available	613	Open in IMG/M
3300004479\|Ga0062595_100089951	Not Available	1589	Open in IMG/M
3300004479\|Ga0062595_100571347	Not Available	872	Open in IMG/M
3300004479\|Ga0062595_101335635	Not Available	648	Open in IMG/M
3300004480\|Ga0062592_101370077	Not Available	672	Open in IMG/M
3300004480\|Ga0062592_102431330	Not Available	526	Open in IMG/M
3300004643\|Ga0062591_100032655	All Organisms → cellular organisms → Bacteria	2742	Open in IMG/M
3300005178\|Ga0066688_10940845	Not Available	530	Open in IMG/M
3300005184\|Ga0066671_10293714	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1017	Open in IMG/M
3300005332\|Ga0066388_103113954	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	847	Open in IMG/M
3300005332\|Ga0066388_105231861	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	658	Open in IMG/M
3300005337\|Ga0070682_100316278	Not Available	1151	Open in IMG/M
3300005337\|Ga0070682_101879701	Not Available	524	Open in IMG/M
3300005434\|Ga0070709_10009955	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5255	Open in IMG/M
3300005434\|Ga0070709_10035653	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3024	Open in IMG/M
3300005434\|Ga0070709_10307125	Not Available	1160	Open in IMG/M
3300005434\|Ga0070709_10330322	Not Available	1121	Open in IMG/M
3300005434\|Ga0070709_10672078	Not Available	803	Open in IMG/M
3300005435\|Ga0070714_100724248	Not Available	961	Open in IMG/M
3300005439\|Ga0070711_100022572	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	4080	Open in IMG/M
3300005439\|Ga0070711_100093480	Not Available	2172	Open in IMG/M
3300005529\|Ga0070741_11350354	Not Available	594	Open in IMG/M
3300005535\|Ga0070684_101241461	Not Available	701	Open in IMG/M
3300005553\|Ga0066695_10307427	Not Available	999	Open in IMG/M
3300005614\|Ga0068856_102690517	Not Available	503	Open in IMG/M
3300005764\|Ga0066903_100557197	Not Available	1968	Open in IMG/M
3300005764\|Ga0066903_100725101	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1759	Open in IMG/M
3300005764\|Ga0066903_100876308	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1620	Open in IMG/M
3300005764\|Ga0066903_100981681	Not Available	1541	Open in IMG/M
3300005764\|Ga0066903_101262261	Not Available	1377	Open in IMG/M
3300005764\|Ga0066903_103191308	Not Available	887	Open in IMG/M
3300006046\|Ga0066652_100339830	Not Available	1347	Open in IMG/M
3300006059\|Ga0075017_100041217	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3074	Open in IMG/M
3300006059\|Ga0075017_100524944	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	900	Open in IMG/M
3300006059\|Ga0075017_101237600	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300006102\|Ga0075015_100624304	Not Available	633	Open in IMG/M
3300006163\|Ga0070715_10138330	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1180	Open in IMG/M
3300006173\|Ga0070716_100098672	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1785	Open in IMG/M
3300006175\|Ga0070712_100528976	Not Available	991	Open in IMG/M
3300006175\|Ga0070712_100834515	Not Available	792	Open in IMG/M
3300006175\|Ga0070712_101445842	Not Available	600	Open in IMG/M
3300006800\|Ga0066660_11413208	Not Available	546	Open in IMG/M
3300006871\|Ga0075434_100062752	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3699	Open in IMG/M
3300009012\|Ga0066710_103281355	Not Available	619	Open in IMG/M
3300009098\|Ga0105245_12203402	Not Available	605	Open in IMG/M
3300009137\|Ga0066709_100263577	All Organisms → cellular organisms → Bacteria	2316	Open in IMG/M
3300009174\|Ga0105241_11985680	Not Available	572	Open in IMG/M
3300009177\|Ga0105248_12524661	Not Available	586	Open in IMG/M
3300009553\|Ga0105249_12842198	Not Available	555	Open in IMG/M
3300010154\|Ga0127503_10703056	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	739	Open in IMG/M
3300010154\|Ga0127503_10994324	Not Available	554	Open in IMG/M
3300010321\|Ga0134067_10211348	Not Available	717	Open in IMG/M
3300010360\|Ga0126372_10278290	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1455	Open in IMG/M
3300010366\|Ga0126379_13516726	Not Available	525	Open in IMG/M
3300010373\|Ga0134128_11028136	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	910	Open in IMG/M
3300010373\|Ga0134128_11713061	Not Available	692	Open in IMG/M
3300010373\|Ga0134128_12870981	Not Available	531	Open in IMG/M
3300010375\|Ga0105239_12682562	Not Available	581	Open in IMG/M
3300010398\|Ga0126383_11599752	Not Available	741	Open in IMG/M
3300010401\|Ga0134121_10371487	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1284	Open in IMG/M
3300011994\|Ga0120157_1052822	All Organisms → cellular organisms → Bacteria	869	Open in IMG/M
3300011996\|Ga0120156_1102641	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300012199\|Ga0137383_10546962	Not Available	847	Open in IMG/M
3300012199\|Ga0137383_11363977	Not Available	503	Open in IMG/M
3300012200\|Ga0137382_10305128	Not Available	1111	Open in IMG/M
3300012200\|Ga0137382_10974862	Not Available	609	Open in IMG/M
3300012201\|Ga0137365_10770938	Not Available	702	Open in IMG/M
3300012201\|Ga0137365_10888646	Not Available	650	Open in IMG/M
3300012206\|Ga0137380_10235623	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1653	Open in IMG/M
3300012207\|Ga0137381_10901835	Not Available	764	Open in IMG/M
3300012208\|Ga0137376_11019340	Not Available	709	Open in IMG/M
3300012208\|Ga0137376_11106626	Not Available	677	Open in IMG/M
3300012209\|Ga0137379_11772972	Not Available	512	Open in IMG/M
3300012211\|Ga0137377_10231095	Not Available	1776	Open in IMG/M
3300012351\|Ga0137386_11236030	Not Available	521	Open in IMG/M
3300012356\|Ga0137371_10457937	Not Available	987	Open in IMG/M
3300012359\|Ga0137385_11143951	Not Available	639	Open in IMG/M
3300012359\|Ga0137385_11251489	Not Available	604	Open in IMG/M
3300012951\|Ga0164300_10010836	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2859	Open in IMG/M
3300012951\|Ga0164300_10011700	Not Available	2789	Open in IMG/M
3300012955\|Ga0164298_10835803	Not Available	663	Open in IMG/M
3300012955\|Ga0164298_11055279	Not Available	605	Open in IMG/M
3300012957\|Ga0164303_10001827	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5958	Open in IMG/M
3300012957\|Ga0164303_10454568	Not Available	807	Open in IMG/M
3300012957\|Ga0164303_10521656	Not Available	765	Open in IMG/M
3300012957\|Ga0164303_11146247	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	565	Open in IMG/M
3300012957\|Ga0164303_11479565	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Virgisporangium → Virgisporangium ochraceum	512	Open in IMG/M
3300012958\|Ga0164299_10660708	Not Available	725	Open in IMG/M
3300012960\|Ga0164301_10090743	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1723	Open in IMG/M
3300012960\|Ga0164301_10234801	All Organisms → cellular organisms → Bacteria	1193	Open in IMG/M
3300012960\|Ga0164301_10873869	Not Available	695	Open in IMG/M
3300012960\|Ga0164301_10997130	Not Available	658	Open in IMG/M
3300012961\|Ga0164302_10014098	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3259	Open in IMG/M
3300012961\|Ga0164302_10014098	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3259	Open in IMG/M
3300012961\|Ga0164302_10446354	Not Available	897	Open in IMG/M
3300012961\|Ga0164302_10718476	Not Available	743	Open in IMG/M
3300012975\|Ga0134110_10431132	Not Available	590	Open in IMG/M
3300012984\|Ga0164309_10289655	Not Available	1175	Open in IMG/M
3300012984\|Ga0164309_10642406	Not Available	834	Open in IMG/M
3300012984\|Ga0164309_10914129	Not Available	716	Open in IMG/M
3300012985\|Ga0164308_10646439	Not Available	905	Open in IMG/M
3300012985\|Ga0164308_10862964	Not Available	794	Open in IMG/M
3300012986\|Ga0164304_11752152	Not Available	519	Open in IMG/M
3300012987\|Ga0164307_10259008	Not Available	1218	Open in IMG/M
3300012988\|Ga0164306_10116684	Not Available	1770	Open in IMG/M
3300012988\|Ga0164306_10454887	Not Available	975	Open in IMG/M
3300012988\|Ga0164306_11922132	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	515	Open in IMG/M
3300012989\|Ga0164305_10291749	Not Available	1201	Open in IMG/M
3300013296\|Ga0157374_10306509	Not Available	1572	Open in IMG/M
3300013297\|Ga0157378_11191791	Not Available	801	Open in IMG/M
3300013763\|Ga0120179_1007093	All Organisms → cellular organisms → Bacteria	3044	Open in IMG/M
3300014968\|Ga0157379_12293199	Not Available	537	Open in IMG/M
3300014969\|Ga0157376_11234261	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	776	Open in IMG/M
3300014969\|Ga0157376_12419255	Not Available	565	Open in IMG/M
3300015374\|Ga0132255_101131880	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1177	Open in IMG/M
3300015374\|Ga0132255_101326422	Not Available	1086	Open in IMG/M
3300018433\|Ga0066667_11162644	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	670	Open in IMG/M
3300018433\|Ga0066667_12035303	Not Available	529	Open in IMG/M
3300018468\|Ga0066662_10540037	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1074	Open in IMG/M
3300019361\|Ga0173482_10176896	Not Available	855	Open in IMG/M
3300019361\|Ga0173482_10584003	All Organisms → cellular organisms → Bacteria → Terrabacteria group	558	Open in IMG/M
3300020075\|Ga0206349_1391427	Not Available	1078	Open in IMG/M
3300020080\|Ga0206350_10835087	Not Available	639	Open in IMG/M
3300021560\|Ga0126371_11723814	Not Available	750	Open in IMG/M
3300022467\|Ga0224712_10331393	Not Available	717	Open in IMG/M
3300023077\|Ga0247802_1069053	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	582	Open in IMG/M
3300024055\|Ga0247794_10075204	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	968	Open in IMG/M
3300025900\|Ga0207710_10668663	Not Available	544	Open in IMG/M
3300025915\|Ga0207693_10448160	Not Available	1008	Open in IMG/M
3300025917\|Ga0207660_11119296	Not Available	641	Open in IMG/M
3300025922\|Ga0207646_10001396	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	29960	Open in IMG/M
3300025927\|Ga0207687_10074152	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2438	Open in IMG/M
3300025928\|Ga0207700_10064139	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales → Jiangellaceae → Jiangella → Jiangella mangrovi	2797	Open in IMG/M
3300025929\|Ga0207664_10052412	Not Available	3226	Open in IMG/M
3300025929\|Ga0207664_10722426	Not Available	896	Open in IMG/M
3300025929\|Ga0207664_11087480	Not Available	715	Open in IMG/M
3300025939\|Ga0207665_10372857	All Organisms → cellular organisms → Bacteria	1081	Open in IMG/M
3300025941\|Ga0207711_11609815	Not Available	593	Open in IMG/M
3300026008\|Ga0208529_1016744	Not Available	678	Open in IMG/M
3300026095\|Ga0207676_10199738	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1766	Open in IMG/M
3300026142\|Ga0207698_11735941	Not Available	639	Open in IMG/M
3300026325\|Ga0209152_10328013	Not Available	579	Open in IMG/M
3300027821\|Ga0209811_10139814	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	892	Open in IMG/M
3300027894\|Ga0209068_10285340	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	924	Open in IMG/M
3300028881\|Ga0307277_10186631	Not Available	906	Open in IMG/M
3300031910\|Ga0306923_12437779	Not Available	518	Open in IMG/M
3300032892\|Ga0335081_12615342	Not Available	518	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.37%
Host-Associated	Host-Associated	11.05%
Engineered	Engineered	0.58%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.30%
Plants	Host-Associated → Plants	11.05%
Aquatic	Environmental → Aquatic	4.07%
Modeled	Engineered → Modeled	0.58%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.30%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.14%
Sediment	Environmental → Aquatic → Sediment	2.91%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.91%
Freshwater	Environmental → Aquatic → Freshwater	1.16%
Simulated Communities (Sequence Read Mixture)	Engineered → Modeled → Simulated Communities (Sequence Read Mixture)	0.58%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	62.21%
Loam	Environmental → Terrestrial → Soil → Loam	20.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.14%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.91%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.74%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.16%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.16%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.16%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified	0.58%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	40.12%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	15.12%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.30%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	8.14%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.14%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.65%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	4.07%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.74%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.16%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.16%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.16%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.16%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.58%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified	0.58%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	18.60%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.88%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.30%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	6.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.65%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.65%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	4.07%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.49%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.33%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	2.33%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.33%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.33%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.33%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.91%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.91%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	2.91%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.74%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	1.74%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.16%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.16%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.16%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.16%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.16%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.16%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.16%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.16%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.16%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.58%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.58%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.58%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.58%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.58%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.58%
Simulated	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified → Simulated	0.58%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2166559005	Simulated microbial communities from Lyon, France	Engineered	Open in IMG/M
2170459002	Grass soil microbial communities from Rothamsted Park, UK - March 2009 direct MP BIO 1O1 lysis 0-21 cm	Environmental	Open in IMG/M
2170459003	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect MP BIO 1O1 lysis 0-21cm	Environmental	Open in IMG/M
2170459023	Grass soil microbial communities from Rothamsted Park, UK - FA3 (control condition)	Environmental	Open in IMG/M
2189573000	Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO 1O1 lysis 0-21cm (T0 for microcosms)	Environmental	Open in IMG/M
2189573001	Grass soil microbial communities from Rothamsted Park, UK - FD2 (NaCl 300g/L 5ml)	Environmental	Open in IMG/M
2189573002	Grass soil microbial communities from Rothamsted Park, UK - FE1 (NaCl 30g/L 5ml)	Environmental	Open in IMG/M
2189573003	Grass soil microbial communities from Rothamsted Park, UK - FE2 (NaCl 30g/L 5ml)	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001535	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A3-PF-15A)- 1 week illumina	Environmental	Open in IMG/M
3300001536	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A15-65cm-8A)- 1 week illumina	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011994	Permafrost microbial communities from Nunavut, Canada - A7_65cm_12M	Environmental	Open in IMG/M
3300011996	Permafrost microbial communities from Nunavut, Canada - A39_65cm_12M	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013763	Permafrost microbial communities from Nunavut, Canada - A15_65cm_0M	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300020075	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020080	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022467	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300023077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S076-202R-6	Environmental	Open in IMG/M
3300024055	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026008	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_0N_202 (SPAdes)	Environmental	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
cont_0108.00004580	2166559005	Simulated	EVLYGNGRRFRVLDVVPFEEEDESPFVGLLQVEAA
E1_02168130	2170459002	Grass Soil	MLIKPGEEIIAGSNQRFRVLDVVPFEEDAESPFVGLLQVEAA
E4A_08351300	2170459003	Grass Soil	MIHAGEEIHLGAGQRFRVIDVVPFKEEDESPFVGLLQVEAAY
FA3_00069410	2170459023	Grass Soil	MIQPGEEILLGAGRTFRVLDVVPFEEDESSFVGLLQVEAVSV
N55_02069280	2189573000	Grass Soil	MIQPGEEIIAGNAQHFRVLDLVPFAEEDESPFVGLLQVEVA
FD2_04168740	2189573001	Grass Soil	MMIKPAEEIIAGINQRFRVLDVVPFEEEDESPFVGMLQVEVA
FE1_07772420	2189573002	Grass Soil	MMIKPEEILLGAGRRFRVLTVVPFEEEDESPFVGLLRVDTA
FE2_07756540	2189573003	Grass Soil	VQLVELPVAMMIKPGEEIQFGGGRRFRVLDVLTFEEEDESPLVGLLQVEAA
JGI10216J12902_1006710971	3300000956	Soil	MDPPPDEEIIAGNNQRFCVLHVGPFDEEDESPFVGLLQVEAA*
JGI10216J12902_1146029201	3300000956	Soil	MRARQPTQVMIHPGQEILFDNGRRFPVLAVVPFEEEDESPFVGLLQ
A3PFW1_105331751	3300001535	Permafrost	ATYAVMIKPGEEILFGAGRRFRVLVVVPFGEEDDSPFVGLLQVEAA*
A3PFW1_106150841	3300001535	Permafrost	MITPREEILVGNGRRFRVLALVPVDDEESRFVGLLQVEAA*
A1565W1_100362621	3300001536	Permafrost	TYAIMIQPGEEILFGKADASAVLDVVPFEEEESPFVGLLQVEAV*
A1565W1_100838134	3300001536	Permafrost	VIVKPGEEILVGNGRRFRVLDVVAFEEEDESPFVGLLKVEAA*
C688J35102_1189037851	3300002568	Soil	QMIHLGDEIHLGAGQRFRVLDVVPFEEEDSPFVGLLQVEPA*
C688J35102_1209492242	3300002568	Soil	MIHLGHEIHVGAGQRFRVLAVVPFEEEDESPFVGLLQVEAARDS*
Ga0062593_1005782793	3300004114	Soil	MRARQPTQVMIHPGQEILVGNGRRFRVLDVVPFEDEDESPFVGLLKVEAA*
Ga0062589_1002062032	3300004156	Soil	MMIQPGEEILLGPGQRFRVVDLVPFGEEDESPFVGLLQVARPAPE*
Ga0062589_1009293861	3300004156	Soil	GEATYAMMIQPGGEIHGSGGQRLRVLDVPMFDEEDESPFVGLLQVEAT*
Ga0062590_1004928891	3300004157	Soil	DLGEATYAMMIQPGGEIHGSGGQRLRVLDVPMFDEEDESPFVGLLQVEAT*
Ga0062590_1006667593	3300004157	Soil	RPREEILVGNGRRFRVVDVVPFEEEDESPLVGMLKVEVA*
Ga0062590_1019097061	3300004157	Soil	MIDRGEEIIAGKNEHFRVVDVVPFEEEDESPFVGLLQVEAV*
Ga0062595_1000899513	3300004479	Soil	VIHIGDEIHLGAGQRFRVLDVVPFDEEDESPFVGLLQIEAA*
Ga0062595_1005713471	3300004479	Soil	MIHPDEEIVAGDDQHFRVLDVVPFEEEDESPFVGLLQVEAA*
Ga0062595_1013356351	3300004479	Soil	VTYAALIRPGEEILVGNGRRFHVLDVVPFDEEDESTFVRLLQVEAALAGL*
Ga0062592_1013700771	3300004480	Soil	MMIHPGEEILLGPGQRFRVVDLVPFGEEDESPFVGLLQVERPAPE*
Ga0062592_1024313301	3300004480	Soil	MIQPGEEIHLGAGQRFRVLDLVPFEEKDESPFVGLLRVEAA*
Ga0062591_1000326554	3300004643	Soil	MMIQPGEEILLGPGQRFRVVDLVPFGEEDESPFVGLLQVERPAPE*
Ga0066688_109408451	3300005178	Soil	MIKPGEEILVGSGRRFRVLDVVPFEEEDELPSIGLLQVEAA*
Ga0066671_102937142	3300005184	Soil	MIHPGDEVYVRAAERFRVLDVVPFEEEDESPFVGLLQVEAA*
Ga0066388_1031139541	3300005332	Tropical Forest Soil	EATYALMIKPGEEIIGEGTDWFRVIDVVPFDEEDESPFVGC*
Ga0066388_1052318612	3300005332	Tropical Forest Soil	EATYALMIKPGEEIIGEGTDWFRVIDVVPFDEEDESPFVGVLTVEAA*
Ga0070682_1003162782	3300005337	Corn Rhizosphere	VIKPGEEIHLGAGQRFRVIDVVPFEEQDASPFVGLLQVEAA*
Ga0070682_1018797011	3300005337	Corn Rhizosphere	MIRPGEEIHLGAGQRFRVVDVVPFEEEDESPFVGLLQVAAA*
Ga0070709_100099555	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MGPRGRRIIAGNNQRFRVLHVVPFDEEDKSPFVGLPQVEAA*
Ga0070709_100356536	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MMIKPGEEIPSGAGQRFRVIDVVAFEEEDESQFVGLLRVEAA*
Ga0070709_103071252	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MIYPGEEIIAGDNEHFRVLELVPIEEEDESPFVGLLQVEAA*
Ga0070709_103303221	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	RPGEEIHLGAGQRFRVVDVVPFEEEDESPFVGLLQVAAA*
Ga0070709_106720782	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MMIKPGEEIHLGAGQRFRILDVVPFDEADESPFVGLLQVEAAYVRSAARET*
Ga0070714_1007242481	3300005435	Agricultural Soil	VTYAVLVKPGEEILVVNGRRFRVLDVVPFDGEDESPFVGLIKVEAA*
Ga0070714_1016857852	3300005435	Agricultural Soil	EDAPLVRIREELFFGGGRRFRIVDVVIFEEEDGSPFVGLLKVEAA*
Ga0070711_1000225726	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MMIKPGEESTSGAGQRFRVIDVVAFEEEDESQFVGLLRVEAA*
Ga0070711_1000934804	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MMIKPGEEIHLGTGQRFRVLDVVPFEDESPFVGLSQVEPA*
Ga0070741_113503542	3300005529	Surface Soil	EASYIQQIKPGEEILYGNGRRFRVLDIAPFDEEDESRFVAMLKVEAT*
Ga0070684_1012414611	3300005535	Corn Rhizosphere	MDQPPDEEIIAGNNQRFRVLHVVPFDEEDESPFVGLLQVEA
Ga0066695_103074271	3300005553	Soil	MIGPGDEIYLGAGQRFRVLDVVPFNEEDESPFVGLLRVEAA*
Ga0068856_1026905171	3300005614	Corn Rhizosphere	NAMMIKPGEEIHGNGGQGLRVVAVVPFEEEDESPFVGLLQVDAA*
Ga0066903_1005571973	3300005764	Tropical Forest Soil	MMIKQGEENIAGSAEHFHVVSVVPFEEEDESPFVRC*
Ga0066903_1007251011	3300005764	Tropical Forest Soil	EATYAQMIKPGEEIIGDGNQHFLVVDVVPFAEEDESEFVGMLKVETA*
Ga0066903_1008763084	3300005764	Tropical Forest Soil	MMIKPGEEIPLDAGQRFRVVAVVPFEEEDESPFVGMLKVEAA*
Ga0066903_1009816812	3300005764	Tropical Forest Soil	MLIKPGEEILFGGVRCFRVLDVVPFEENDELGFVGMLTVEAA*
Ga0066903_1012622612	3300005764	Tropical Forest Soil	MIKPGEEIHLAAGQRFGVLAVVPFDEEEAPPFVG*
Ga0066903_1031913082	3300005764	Tropical Forest Soil	MQIKPDEEIHLGGGQTFRVLDVVSFEEADELGFVGMLKVEAA*
Ga0066652_1003398304	3300006046	Soil	MIHPDEEIIARDNQHFPVIDVVPFGDDESPSVGMLKVENA*
Ga0075017_1000412174	3300006059	Watersheds	MMIKPGEEILLGAGQRFRVLDLVPFDGDESPFVGLLKIESI*
Ga0075017_1005249441	3300006059	Watersheds	AMMIKPGEEIHLGSGQRFCVVDVVLFGEGDELPFVGLLQVEAA*
Ga0075017_1012376002	3300006059	Watersheds	MVKPGEEILVGNGRRFRVLDVVPFEEEDSRILRLLKVEAA*
Ga0075015_1006243042	3300006102	Watersheds	MMIKPGEEILLGAGQRFRVLDLVPFDGDESPFVGLLKIESV*
Ga0070715_101383301	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MIKPGEGIHLGAGERFRVLDVVAFGEEDGSPFVGLLQVEAV*
Ga0070716_1000986725	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MMIKPGEETTSGAGQRFRVIDVVAFEEEDESQFVGLLRVEAA*
Ga0070712_1005289762	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MIHPGEEIIAGGNQHFRVVDVVMFADEDDSPFVGLLQLEAA*
Ga0070712_1008345152	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	LGEATYLSQIRLGEEILFGNGRRLRVVDVVAFDEHEESAYVGMLKVEAA*
Ga0070712_1014458421	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	KPGEEIIAGDNRRFRVVDVVPFGEEEESPFVAMRKVDAA*
Ga0066660_114132081	3300006800	Soil	MMIHPGEEIIAGHNQRFRVLAVVPFVKDESPFVGLLQVQAA*
Ga0075434_1000627525	3300006871	Populus Rhizosphere	MIHLGDEIHLVAGQRFRGVDVVEFDEEDEWPLIGLLQVEATSS*
Ga0066710_1032813552	3300009012	Grasslands Soil	MIRPGEEILVGNGRLCRVLDLVSIDEEDSPFVGLLQVEAI
Ga0105245_122034021	3300009098	Miscanthus Rhizosphere	IKPGEEIHLGAGQRFRVLDVVPFDEEDESPFVGLLQIEAA*
Ga0066709_1002635774	3300009137	Grasslands Soil	MIHPGDEIHLGAGQRFRVLDVVPFEEEDESPFIGLLQVEAAA*
Ga0105241_119856801	3300009174	Corn Rhizosphere	MIDRGEEIIAGKNEHFRVVDVVPFEEEDESPFVGLLQVEARLPRVRQ*
Ga0105248_125246611	3300009177	Switchgrass Rhizosphere	EEIQGNGGQRLRVLAVGPFDEEDESPFVGLLPAEAV*
Ga0105249_128421981	3300009553	Switchgrass Rhizosphere	GEEIIAGKNEHFRVVDVVPFEEEDESPFVGLLQVEAV*
Ga0127503_107030562	3300010154	Soil	MIKPGEEIIAGKNEHFRVVAVIPFGEEDESPFVGLLRVEAA*
Ga0127503_109943242	3300010154	Soil	MEEVAGRAILVGNGRHFRVLAVIPFAEEDESRFVGLLQVEAA*
Ga0134067_102113482	3300010321	Grasslands Soil	MIKPGEEIIAGANERFQVVDVPFEEEDKSPFVGLLQVEAAWRDWSILLLF
Ga0126372_102782902	3300010360	Tropical Forest Soil	MIQPGDEVHVGNGRRFRVLDVVLSEEEDESPFVGLLKVETA*
Ga0126377_127678371	3300010362	Tropical Forest Soil	LRLHAGEEIIADKNQHFRVVAVVPFEGTDELGFVGMLRVESAQT*
Ga0126379_135167261	3300010366	Tropical Forest Soil	MQIKPGEEIIGEGTQWFRVVDVVPFDEEDESPFVGVLTVEAR*
Ga0134128_110281361	3300010373	Terrestrial Soil	KRPTRSVIKPGEEIHLGAGQRFRVIDVVPFEEQDASPFAGLLQVEAA*
Ga0134128_117130612	3300010373	Terrestrial Soil	MMIKPGEEIHLGAGQRFRVVDVVPFEEEDESPFVGL
Ga0134128_128709812	3300010373	Terrestrial Soil	MGPRGRRIIAGNNQRFRVLHVVPFDEEDKSPFVGLLQVGAT*
Ga0105239_126825621	3300010375	Corn Rhizosphere	MIEAIHLAADQGFRVIDVIPLDVEDESPFVGLLQVEAA*
Ga0126383_115997522	3300010398	Tropical Forest Soil	MMIQPGEEIIADKNQHFRVVDAVLFDEEDESQFVGLLKVEAA*
Ga0134121_103714872	3300010401	Terrestrial Soil	VIKPGEEIHLVAGQRFRVIDVVPFEEQDASPFVGLLQVEAA*
Ga0120157_10528222	3300011994	Permafrost	MITPREEILVGNGRRFRVLALVPVDDEESRFVGLLQV*
Ga0120156_11026412	3300011996	Permafrost	VKPGEEILVGNGRRFRVLDVVAFEEEDESPFVGLLRVEAA*
Ga0137383_105469621	3300012199	Vadose Zone Soil	AMMIKTGEEIIAGTNERFRVLDVVPFEEEDESPFVGLLKVEAA*
Ga0137383_113639772	3300012199	Vadose Zone Soil	RVSAPGHEILAGGGRRFRVIDVVPFDEEDESPFVGLLQVEAA*
Ga0137382_103051281	3300012200	Vadose Zone Soil	PGEEIIFVNGRRFRILAVSPFEEEDESPFVGLLQVEAA*
Ga0137382_109748623	3300012200	Vadose Zone Soil	RFLNPILVVGNGRRFRVLAVVPFEDEDESQFVELLQVEAA*
Ga0137365_107709381	3300012201	Vadose Zone Soil	LVKPGEEILVGNGRRFRVLDVVPFDEEDESAFVGLLKVEAA*
Ga0137365_108886462	3300012201	Vadose Zone Soil	MMIKPGEETHGSGGQRLRVLDVVPFDEEDESPFVGPLQIEAA*
Ga0137380_102356232	3300012206	Vadose Zone Soil	MKIHPGEEVLLGASRRFRVLDFVPFEEEGESSLVGLLQVEAM*
Ga0137381_109018351	3300012207	Vadose Zone Soil	EILGGDGRRFRVIDVGPFDEEDESPFVGLLQVEAA*
Ga0137376_110193401	3300012208	Vadose Zone Soil	MMIRPGEEILFGNGRRFRVLAVVPFVEDESPFVGLLQVQAA*
Ga0137376_111066261	3300012208	Vadose Zone Soil	VIHPGEKIHLGAGQRFRVLDVVPFEEEDESLLVGLLKVEAA*
Ga0137379_117729722	3300012209	Vadose Zone Soil	MIHPGEEIIAKGNEHFQVVDVVPFEEEDSPFVGLLQVEAA*
Ga0137377_102310952	3300012211	Vadose Zone Soil	GEATYAVMIRPGEEILVGNGRRFRVLDLVSIDEEDSPFVGLLQVEAT*
Ga0137386_112360301	3300012351	Vadose Zone Soil	MIHPGDEIHLGAGRRFRVLDVVPFEEEGESPFVGLLQ
Ga0137371_104579372	3300012356	Vadose Zone Soil	MMIKPGEETHGSGGQRLRVLDVVPFDDEDESPFVRLLQVVEV*
Ga0137385_111439512	3300012359	Vadose Zone Soil	MIKPVEEIVAGDDRRFRVLDVVPFEEEDESAFVELLRVEVA*
Ga0137385_112514892	3300012359	Vadose Zone Soil	LSPGEEIFVGNGRRLRVLAVVPFSEKDESPFVGLLQVEAV*
Ga0164300_100108361	3300012951	Soil	STSGAGQRFRVIDVVAFEEEDESQFVGLLRVEAA*
Ga0164300_100117007	3300012951	Soil	VIKPGEEIHLGAGQRFRVIDVVPLEEQDASPFVGLLQVEAA*
Ga0164298_108358031	3300012955	Soil	GEATYAQMIHVGDEIHVGAGQRFRVLDIVTFDEEDESPFVGMLKVEVA*
Ga0164298_110552791	3300012955	Soil	MTIRAGEEIHGSGGQPLRAVDVVPCEEEHESPFVGLLQVETT*
Ga0164303_1000182710	3300012957	Soil	MGPRGRRIIAGNNQRFRVLHVAPFDEEDKSPFVGLLQVEAA*
Ga0164303_104545681	3300012957	Soil	MIKPGEEILLGGGQHFRVLYVVAFHEEDESPFVGMLKVEAA*
Ga0164303_105216562	3300012957	Soil	IKPGEEILFGNGRRFRVLDVVPFEEEDESPFVGLLRVEAA*
Ga0164303_111462471	3300012957	Soil	EATYAQMINPGDEVHVGAGQRFRVIDVVAFEEEDESPFVGLLQVEAA*
Ga0164303_114795651	3300012957	Soil	MIHLGDEIHLNAGQRFRVVDVVEFEEEDESPFVGLL
Ga0164299_106607082	3300012958	Soil	MMIKPGEEIHLGAGQRFRILGVVPFDEADESPFVGLLQVEAAYVR*
Ga0164301_100907431	3300012960	Soil	VIKPGEEIHLGAGQRFRVIDAVPFEEQDASPFVGLLQVEAA*
Ga0164301_102348013	3300012960	Soil	MIKPGEEIHLGAGQRFRILDVVPFDEADESPFVGLL
Ga0164301_108738692	3300012960	Soil	MGPPGRRIIAGNNQRFRVLHVAPFDEEDKSPFVGLLQVEAA*
Ga0164301_109971302	3300012960	Soil	MTIRAGEEIHGSGGQRLRVVDVVPFEEEDESPFVGLLQVETT*
Ga0164302_100140981	3300012961	Soil	MGPPGRRIIAGNNQRFRVLHVVPFDEEDKSPFVGLPQVEAA*
Ga0164302_100140985	3300012961	Soil	VIKPGEEIHLVAGQRFRVIDVVPFEEQDASPFGGLLQVEAA*
Ga0164302_104463542	3300012961	Soil	MIHTGDEIHLSAGQRFRVLDVVTFDEEDESPFVGLLQVEAA*
Ga0164302_107184761	3300012961	Soil	KVGEEILVGNGRRFRVLDVVPFEEEDESPFVGMLKVEVA*
Ga0134110_104311321	3300012975	Grasslands Soil	MMIKPGEEIIAGANERFQVVDVPFEEEDKSPFVGLLQ
Ga0164309_102896552	3300012984	Soil	MGPPGRRIIAGNNLRFRVLHVVPFDEEDKSPFVGLLQVEAA*
Ga0164309_106424062	3300012984	Soil	MMIKPGEEIHLGAGQRFRILDVVPFDEADESPFVGLLQVEAAYVR*
Ga0164309_109141291	3300012984	Soil	MIKPGEEILLGGGQHFRVLDVVAFDEEDESPFVGMLKVEAA*
Ga0164308_106464393	3300012985	Soil	MGPPGRRIIAGNNQRFRVLHVAPFDEEDKSPFVGLLRVEAADA
Ga0164308_108629641	3300012985	Soil	TYAMMIKPGEEIHLGAGQRFRILDVVPFDEADESPFVGLLQVEAAYVR*
Ga0164304_117521521	3300012986	Soil	LGEATYAMMIKPGEEILYGNGRRFRVLDVVPFEEDDQSPFVGLLQVEAA*
Ga0164307_102590082	3300012987	Soil	MIKPGEEILLGGGQHFRVLYVVAFDEEDESPFVGMLKVEAA*
Ga0164306_101166844	3300012988	Soil	VIKPGEEIHLGAGQRFRVIDVVPFEEQDASPFVGL
Ga0164306_104548871	3300012988	Soil	TYAQMIHVGDEIHVGAGQRFRVLDIVPFDEEDESPFVGMLKVEVA*
Ga0164306_119221322	3300012988	Soil	LGEATYAMMIKPDEEIHLGAGKRFRVLDVVAFEEEDESPFVGLLQVEAA*
Ga0164305_102917491	3300012989	Soil	VTYAVLVKPGEEILVVNGRRFRVLDVVPFDGEDESPFVGLLKVEAA*
Ga0157374_103065091	3300013296	Miscanthus Rhizosphere	MIHPGEKILLGAGRRCRVLDVVPFDEEDESPFVDRL
Ga0157378_111917911	3300013297	Miscanthus Rhizosphere	MIDRGEEIIAGKNEHFRVVDVVPFEEADESPFVGLLQVEAV*
Ga0120179_10070933	3300013763	Permafrost	LVKPGETIITGAGRKLRVLAVVPIEEDSPFVGLLQAEAA*
Ga0157379_122931991	3300014968	Switchgrass Rhizosphere	DLGEATYAMMIKPGEEIHLGTGQRFRVLDVVPFEDESPFVGLSQVEPA*
Ga0157376_112342612	3300014969	Miscanthus Rhizosphere	MIHLGDEIHLGAGQRFRVIDVVAFEEEDESPFVGLLRVEAA*
Ga0157376_124192552	3300014969	Miscanthus Rhizosphere	EEILLGAGRRFRVLDVVTFEEEDESQLVGLLQVEAA*
Ga0132255_1011318802	3300015374	Arabidopsis Rhizosphere	MDQPPDEEIIAGNNQRFRVLHVVPFDEEDESPFVGLLQVEAA*
Ga0132255_1013264222	3300015374	Arabidopsis Rhizosphere	VIERGEEIHLAAGERLRVLAVSPFDEEDESPFGELLQVEAA*
Ga0066667_111626441	3300018433	Grasslands Soil	MIHPGDEVYVRAAERFRVLDVVPFEEEDESPFVGLLQVEAA
Ga0066667_120353031	3300018433	Grasslands Soil	MMIHPGEEIIAGHNQRFRVLAVVPFVEDESPFVGLLQVQAA
Ga0066662_105400372	3300018468	Grasslands Soil	MMIKPGEEIIAGTNELFRVLGVVPFEEEDESPSSGCSRS
Ga0173482_101768962	3300019361	Soil	MIDRGEEIIAGKNEHFRVVDVVPFEEEDESPFVGLLQVEAV
Ga0173482_105840032	3300019361	Soil	QPGEEILLGPGQRFRVVDLVPFGEEDESPFVGLLQVARPAPE
Ga0206349_13914272	3300020075	Corn, Switchgrass And Miscanthus Rhizosphere	MDQPPDEEIIAGNNQRFRVLHVVPFDEEDESPFVGLLQVEAV
Ga0206350_108350872	3300020080	Corn, Switchgrass And Miscanthus Rhizosphere	MDPPPDEEIIAGNNQRFRVLHVVPFDEEDESPFVGLLQVEAA
Ga0126371_108954312	3300021560	Tropical Forest Soil	MIHADEEIIANGNKRFRVVDVVPLEEADELGFVGMLRVEAA
Ga0126371_117238143	3300021560	Tropical Forest Soil	KPGEEIHVSGGQRMRVLDVVPFEEEDESPFVGLPQVEVV
Ga0224712_103313932	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	MDQPPDEEIIAGNNQRFRVLHVVPFDEEDESPFVGLLQVEAA
Ga0247802_10690531	3300023077	Soil	TYAQMIHLGDEIHLGAGQRFRVLDVVPFDEEDESPFVGLLQVEAT
Ga0247794_100752041	3300024055	Soil	VRPREEILVGNGRRFRVVDVVPFEEEDESPLVGMLKVEVA
Ga0207710_106686631	3300025900	Switchgrass Rhizosphere	KPGEEIIAGSNQHYRVVDLVEFDEEEDALFVGLLQVEAA
Ga0207693_104481602	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MIHPGEEIIAGGNQHFRVVDVVMFADEDDSPFVGLLQLEAA
Ga0207663_101851772	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MIYPGEEIIAGDNEHFRVLELVPIEEEDKSPFVGLLQVEAA
Ga0207660_111192962	3300025917	Corn Rhizosphere	MIHPDEEIIAGRNERYRVLDVGPVEEEHESFVGLLQVEAA
Ga0207646_1000139623	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	LNPSLIGNGRRFRVLDVVPFEEESPFVRLLVVEAA
Ga0207687_100741522	3300025927	Miscanthus Rhizosphere	MIDRGEEIIAGKNEHFRVVDVVQFDEEDESPFVGLLQVEAV
Ga0207700_100641396	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VTWKPGDEIFVGPGKRLKVLDVVPVEEEDSPYRGLLKVEAA
Ga0207664_100524125	3300025929	Agricultural Soil	MINPGEEIIGGQNEHFRVFDEEDESPFVGLLRVEEA
Ga0207664_107224262	3300025929	Agricultural Soil	VLVKPGEEILVVNGRRFRVLDVVPFDGEDESPFVGLIKVEAA
Ga0207664_110874801	3300025929	Agricultural Soil	SRAGGEEIIAGNNQHFRVVDVVPFDEEDELPVVGQLQVEAA
Ga0207665_103728571	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MMIKPGEEIHLGAGQRFHILDVVPFDEADESPFVGLLQ
Ga0207711_116098151	3300025941	Switchgrass Rhizosphere	EEIQGNGGQRLRVLAVGPFDEEDESPFVGLLPAEAV
Ga0208529_10167442	3300026008	Rice Paddy Soil	VAWKRKEIFLDNGRRLRVLDVVPFEEEDESPFVGLLKVEAT
Ga0207676_101997381	3300026095	Switchgrass Rhizosphere	MIHLGDEIHLGAGQRFRVIDVVAFEEEDESPFVGLLQVEAV
Ga0207698_117359412	3300026142	Corn Rhizosphere	MIDRGEEIIAGKNEHFRVVDVVPFEEEDESPFVGLLQVEAE
Ga0209152_103280132	3300026325	Soil	AMMIKPGEEIIAGSNQRFRVVDIVPFAEEDESPFVGLLQVEAA
Ga0209811_101398142	3300027821	Surface Soil	MMIKPGEEIHLGAGQRFRVIDVVPFEEQDASPFVGLLQVKAA
Ga0209068_102853402	3300027894	Watersheds	RREPGEEILLGAGQRFRVLDLVPFDGDESPFVGLLKIESI
Ga0307277_101866312	3300028881	Soil	VRPGEEILVGNGRRFRVLDVIPFEEEDESPFVGLLQVEAA
Ga0306923_124377791	3300031910	Soil	AGEEIIAGRAERFRVLDVVPFEEEDESPFVGLLRIEAA
Ga0335081_126153421	3300032892	Soil	KPGEEVLYGNGRRFRVIDVAPFAEEDESVFVAMLKVEAL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F035521

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences