Metagenome / Metatranscriptome Family F035718

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F035718
Family Type	Metagenome / Metatranscriptome
Number of Sequences	171
Average Sequence Length	48 residues
Representative Sequence	MAKFIQICASQNDLFALDEEGVIYQYHFNAKTWVKLIGNRESDETGEG
Number of Associated Samples	142
Number of Associated Scaffolds	171

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	69.23 %
% of genes near scaffold ends (potentially truncated)	40.35 %
% of genes from short scaffolds (< 2000 bps)	76.02 %
Associated GOLD sequencing projects	126
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (92.982 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (18.713 % of family members)
Environment Ontology (ENVO)	Unclassified (27.485 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (38.596 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 17.11% β-sheet: 23.68% Coil/Unstructured: 59.21%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.47
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.47
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 171 Family Scaffolds
PF00118	Cpn60_TCP1	26.32
PF08334	T2SSG	4.68
PF00487	FA_desaturase	4.09
PF13633	Obsolete Pfam Family	2.92
PF03631	Virul_fac_BrkB	2.34
PF06348	DUF1059	1.17
PF00076	RRM_1	1.17
PF01027	Bax1-I	1.17
PF00166	Cpn10	1.17
PF13544	Obsolete Pfam Family	1.17
PF13419	HAD_2	1.17
PF00072	Response_reg	0.58
PF16338	AGL_N	0.58
PF05598	DUF772	0.58
PF07859	Abhydrolase_3	0.58
PF00213	OSCP	0.58
PF07992	Pyr_redox_2	0.58
PF00378	ECH_1	0.58
PF00589	Phage_integrase	0.58
PF08031	BBE	0.58
PF00528	BPD_transp_1	0.58
PF03994	DUF350	0.58
PF10091	Glycoamylase	0.58
PF07690	MFS_1	0.58
PF03699	UPF0182	0.58
PF07963	N_methyl	0.58
PF10604	Polyketide_cyc2	0.58
PF00326	Peptidase_S9	0.58
PF08245	Mur_ligase_M	0.58

COG ID	Name	Functional Category	% Frequency in 171 Family Scaffolds
COG0459	Chaperonin GroEL (HSP60 family)	Posttranslational modification, protein turnover, chaperones [O]	26.32
COG1398	Fatty-acid desaturase	Lipid transport and metabolism [I]	4.09
COG3239	Fatty acid desaturase	Lipid transport and metabolism [I]	4.09
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	2.34
COG0234	Co-chaperonin GroES (HSP10)	Posttranslational modification, protein turnover, chaperones [O]	1.17
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	0.58
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	0.58
COG0712	FoF1-type ATP synthase, delta subunit	Energy production and conversion [C]	0.58
COG1615	Uncharacterized membrane protein, UPF0182 family	Function unknown [S]	0.58

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	92.98 %
Unclassified	root	N/A	7.02 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	92.98 %
Unclassified	root	N/A	7.02 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	92.98 %
Unclassified	root	N/A	7.02 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	30.41 %
Unclassified	root	N/A	7.02 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.85 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	4.68 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.58 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	30.41 %
Unclassified	root	N/A	7.02 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4.68 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.58 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.58 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.58 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	29.82 %
Unclassified	root	N/A	7.02 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4.68 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.58 %
candidate division TA06	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division TA06	0.58 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.58 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.58 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	21.64 %
Unclassified	root	N/A	7.02 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	2.92 %
candidate division TA06 bacterium ADurb.Bin417	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division TA06 → candidate division TA06 bacterium ADurb.Bin417	0.58 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.58 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.58 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.58 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.58 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	21.64 %
Unclassified	root	N/A	7.02 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.92 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.58 %
candidate division TA06 bacterium ADurb.Bin417	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division TA06 → candidate division TA06 bacterium ADurb.Bin417	0.58 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.58 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.58 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.58 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	21.64 %
Unclassified	root	N/A	7.02 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.92 %
Rhodococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus	0.58 %
candidate division TA06 bacterium ADurb.Bin417	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division TA06 → candidate division TA06 bacterium ADurb.Bin417	0.58 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.58 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.58 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.58 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	21.64 %
Unclassified	root	N/A	7.02 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.92 %
Rhodococcus ruber	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → Rhodococcus ruber	0.58 %
candidate division TA06 bacterium ADurb.Bin417	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division TA06 → candidate division TA06 bacterium ADurb.Bin417	0.58 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.58 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.58 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.58 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	21.64 %
Unclassified	root	N/A	7.02 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.92 %
Rhodococcus ruber BKS 20-38	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → Rhodococcus ruber → Rhodococcus ruber BKS 20-38	0.58 %
candidate division TA06 bacterium ADurb.Bin417	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division TA06 → candidate division TA06 bacterium ADurb.Bin417	0.58 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.58 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.58 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.58 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2140918013\|NODE_45_length_1320_cov_14.577272	All Organisms → cellular organisms → Bacteria	1352	Open in IMG/M
3300000571\|JGI1358J11329_10022475	All Organisms → cellular organisms → Bacteria	3173	Open in IMG/M
3300002245\|JGIcombinedJ26739_100965220	All Organisms → cellular organisms → Bacteria	736	Open in IMG/M
3300002681\|Ga0005471J37259_108341	All Organisms → cellular organisms → Bacteria	839	Open in IMG/M
3300002886\|JGI25612J43240_1051737	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300002908\|JGI25382J43887_10117585	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1387	Open in IMG/M
3300004114\|Ga0062593_100074650	All Organisms → cellular organisms → Bacteria	2263	Open in IMG/M
3300005093\|Ga0062594_101137676	All Organisms → cellular organisms → Bacteria	767	Open in IMG/M
3300005166\|Ga0066674_10192863	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	969	Open in IMG/M
3300005174\|Ga0066680_10160053	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1412	Open in IMG/M
3300005329\|Ga0070683_100688793	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → Rhodococcus ruber → Rhodococcus ruber BKS 20-38	979	Open in IMG/M
3300005341\|Ga0070691_10329842	All Organisms → cellular organisms → Bacteria	842	Open in IMG/M
3300005434\|Ga0070709_10289991	All Organisms → cellular organisms → Bacteria	1192	Open in IMG/M
3300005439\|Ga0070711_100538091	All Organisms → cellular organisms → Bacteria	968	Open in IMG/M
3300005440\|Ga0070705_101598019	Not Available	548	Open in IMG/M
3300005445\|Ga0070708_100003367	All Organisms → cellular organisms → Bacteria → Proteobacteria	12524	Open in IMG/M
3300005445\|Ga0070708_100103477	All Organisms → cellular organisms → Bacteria	2610	Open in IMG/M
3300005445\|Ga0070708_100194765	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1896	Open in IMG/M
3300005450\|Ga0066682_10010649	All Organisms → cellular organisms → Bacteria → Proteobacteria	4830	Open in IMG/M
3300005467\|Ga0070706_101016027	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	764	Open in IMG/M
3300005468\|Ga0070707_100062130	All Organisms → cellular organisms → Bacteria	3583	Open in IMG/M
3300005549\|Ga0070704_100988210	All Organisms → cellular organisms → Bacteria	761	Open in IMG/M
3300005552\|Ga0066701_10049699	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2296	Open in IMG/M
3300005556\|Ga0066707_10003324	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	6815	Open in IMG/M
3300005574\|Ga0066694_10175677	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1016	Open in IMG/M
3300005586\|Ga0066691_10047661	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2285	Open in IMG/M
3300005617\|Ga0068859_100006224	All Organisms → cellular organisms → Bacteria → Proteobacteria	12114	Open in IMG/M
3300005890\|Ga0075285_1008391	All Organisms → cellular organisms → Bacteria	1124	Open in IMG/M
3300006031\|Ga0066651_10089292	All Organisms → cellular organisms → Bacteria	1531	Open in IMG/M
3300006041\|Ga0075023_100032885	All Organisms → cellular organisms → Bacteria	1537	Open in IMG/M
3300006041\|Ga0075023_100379206	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300006047\|Ga0075024_100102008	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1260	Open in IMG/M
3300006755\|Ga0079222_10010167	All Organisms → cellular organisms → Bacteria	3377	Open in IMG/M
3300006755\|Ga0079222_10842699	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M
3300006794\|Ga0066658_10009030	All Organisms → cellular organisms → Bacteria	3638	Open in IMG/M
3300006804\|Ga0079221_10532656	All Organisms → cellular organisms → Bacteria	772	Open in IMG/M
3300006806\|Ga0079220_11971997	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300006846\|Ga0075430_101297581	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300006852\|Ga0075433_10504366	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1065	Open in IMG/M
3300006854\|Ga0075425_100040804	All Organisms → cellular organisms → Bacteria → Proteobacteria	5181	Open in IMG/M
3300006854\|Ga0075425_101706587	All Organisms → cellular organisms → Bacteria	708	Open in IMG/M
3300006871\|Ga0075434_100698908	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1031	Open in IMG/M
3300006871\|Ga0075434_101634368	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	653	Open in IMG/M
3300006954\|Ga0079219_10957250	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M
3300007255\|Ga0099791_10040987	All Organisms → cellular organisms → Bacteria	2056	Open in IMG/M
3300007255\|Ga0099791_10160079	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1054	Open in IMG/M
3300007255\|Ga0099791_10574057	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300009038\|Ga0099829_10009079	All Organisms → cellular organisms → Bacteria → Proteobacteria	6350	Open in IMG/M
3300009038\|Ga0099829_10140566	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1919	Open in IMG/M
3300009089\|Ga0099828_10102205	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2481	Open in IMG/M
3300009089\|Ga0099828_11359367	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300009090\|Ga0099827_10908108	All Organisms → cellular organisms → Bacteria	763	Open in IMG/M
3300009156\|Ga0111538_13944476	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300009162\|Ga0075423_12582190	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	555	Open in IMG/M
3300009444\|Ga0114945_10026376	Not Available	3107	Open in IMG/M
3300009553\|Ga0105249_12040761	All Organisms → cellular organisms → Bacteria	646	Open in IMG/M
3300009777\|Ga0105164_10050168	All Organisms → cellular organisms → Bacteria	2244	Open in IMG/M
3300009777\|Ga0105164_10441465	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300009808\|Ga0105071_1003474	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1853	Open in IMG/M
3300009813\|Ga0105057_1075386	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	591	Open in IMG/M
3300009820\|Ga0105085_1107525	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300009822\|Ga0105066_1013057	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1567	Open in IMG/M
3300009822\|Ga0105066_1065974	All Organisms → cellular organisms → Bacteria	772	Open in IMG/M
3300010333\|Ga0134080_10188921	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	888	Open in IMG/M
3300011120\|Ga0150983_12998407	Not Available	539	Open in IMG/M
3300011270\|Ga0137391_10388192	All Organisms → cellular organisms → Bacteria	1195	Open in IMG/M
3300012096\|Ga0137389_11171321	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300012189\|Ga0137388_10599718	All Organisms → cellular organisms → Bacteria	1024	Open in IMG/M
3300012201\|Ga0137365_10202784	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1482	Open in IMG/M
3300012203\|Ga0137399_11769518	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	506	Open in IMG/M
3300012204\|Ga0137374_10009680	All Organisms → cellular organisms → Bacteria	11364	Open in IMG/M
3300012205\|Ga0137362_11064256	All Organisms → cellular organisms → Bacteria	688	Open in IMG/M
3300012205\|Ga0137362_11314835	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	608	Open in IMG/M
3300012211\|Ga0137377_10030379	All Organisms → cellular organisms → Bacteria	4891	Open in IMG/M
3300012351\|Ga0137386_10083368	All Organisms → cellular organisms → Bacteria	2242	Open in IMG/M
3300012359\|Ga0137385_10024693	All Organisms → cellular organisms → Bacteria → Proteobacteria	5384	Open in IMG/M
3300012360\|Ga0137375_11467299	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	503	Open in IMG/M
3300012493\|Ga0157355_1030235	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	556	Open in IMG/M
3300012917\|Ga0137395_10307600	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1124	Open in IMG/M
3300012918\|Ga0137396_10210015	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1432	Open in IMG/M
3300012918\|Ga0137396_10291429	All Organisms → cellular organisms → Bacteria	1206	Open in IMG/M
3300012927\|Ga0137416_10127377	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1959	Open in IMG/M
3300012986\|Ga0164304_10013006	All Organisms → cellular organisms → Bacteria	3773	Open in IMG/M
3300015373\|Ga0132257_102995365	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300015374\|Ga0132255_101623550	Not Available	980	Open in IMG/M
3300017927\|Ga0187824_10053134	Not Available	1252	Open in IMG/M
3300017936\|Ga0187821_10050967	Not Available	1485	Open in IMG/M
3300018053\|Ga0184626_10112370	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1156	Open in IMG/M
3300018074\|Ga0184640_10115824	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1177	Open in IMG/M
3300018077\|Ga0184633_10386908	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	701	Open in IMG/M
3300018422\|Ga0190265_10273223	All Organisms → cellular organisms → Bacteria	1748	Open in IMG/M
3300018431\|Ga0066655_10165508	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1330	Open in IMG/M
3300018468\|Ga0066662_10609198	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1024	Open in IMG/M
3300019877\|Ga0193722_1063453	All Organisms → cellular organisms → Bacteria	923	Open in IMG/M
3300020022\|Ga0193733_1117035	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	738	Open in IMG/M
3300021086\|Ga0179596_10015040	All Organisms → cellular organisms → Bacteria	2662	Open in IMG/M
3300021403\|Ga0210397_11429388	Not Available	537	Open in IMG/M
3300022563\|Ga0212128_10065604	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2342	Open in IMG/M
3300024330\|Ga0137417_1052143	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1099	Open in IMG/M
3300024330\|Ga0137417_1319135	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1688	Open in IMG/M
3300025173\|Ga0209824_10005410	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	5966	Open in IMG/M
3300025312\|Ga0209321_10206493	All Organisms → cellular organisms → Bacteria	1011	Open in IMG/M
3300025314\|Ga0209323_10372280	All Organisms → cellular organisms → Bacteria	870	Open in IMG/M
3300025322\|Ga0209641_10955007	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300025910\|Ga0207684_10205602	All Organisms → cellular organisms → Bacteria	1699	Open in IMG/M
3300025910\|Ga0207684_10986337	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	705	Open in IMG/M
3300025914\|Ga0207671_10224693	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division TA06 → candidate division TA06 bacterium ADurb.Bin417	1471	Open in IMG/M
3300025922\|Ga0207646_10175833	All Organisms → cellular organisms → Bacteria	1933	Open in IMG/M
3300025939\|Ga0207665_10628992	Not Available	840	Open in IMG/M
3300025944\|Ga0207661_10247247	All Organisms → cellular organisms → Bacteria	1584	Open in IMG/M
3300026005\|Ga0208285_1000113	All Organisms → cellular organisms → Bacteria	2369	Open in IMG/M
3300026325\|Ga0209152_10112020	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1035	Open in IMG/M
3300026329\|Ga0209375_1027165	All Organisms → cellular organisms → Bacteria → Proteobacteria	3153	Open in IMG/M
3300026332\|Ga0209803_1199702	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	737	Open in IMG/M
3300026332\|Ga0209803_1234704	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	640	Open in IMG/M
3300026342\|Ga0209057_1041816	All Organisms → cellular organisms → Bacteria	2261	Open in IMG/M
3300026361\|Ga0257176_1008024	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1323	Open in IMG/M
3300026361\|Ga0257176_1063226	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	592	Open in IMG/M
3300026514\|Ga0257168_1021091	All Organisms → cellular organisms → Bacteria	1346	Open in IMG/M
3300026514\|Ga0257168_1075555	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	745	Open in IMG/M
3300026524\|Ga0209690_1124296	All Organisms → cellular organisms → Bacteria	1009	Open in IMG/M
3300026538\|Ga0209056_10578200	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	568	Open in IMG/M
3300027655\|Ga0209388_1103711	All Organisms → cellular organisms → Bacteria	815	Open in IMG/M
3300027775\|Ga0209177_10130168	All Organisms → cellular organisms → Bacteria	833	Open in IMG/M
3300027775\|Ga0209177_10253951	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300027835\|Ga0209515_10089856	All Organisms → cellular organisms → Bacteria	2106	Open in IMG/M
3300027846\|Ga0209180_10041954	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2501	Open in IMG/M
3300027880\|Ga0209481_10679324	Not Available	534	Open in IMG/M
3300027882\|Ga0209590_10530253	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	760	Open in IMG/M
3300027894\|Ga0209068_10007659	All Organisms → cellular organisms → Bacteria	5091	Open in IMG/M
3300027915\|Ga0209069_10287824	All Organisms → cellular organisms → Bacteria	868	Open in IMG/M
3300028047\|Ga0209526_10168784	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1527	Open in IMG/M
3300028381\|Ga0268264_12348995	Not Available	540	Open in IMG/M
3300028536\|Ga0137415_10042835	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4419	Open in IMG/M
3300028673\|Ga0257175_1034620	All Organisms → cellular organisms → Bacteria	889	Open in IMG/M
3300028792\|Ga0307504_10121442	All Organisms → cellular organisms → Bacteria	857	Open in IMG/M
3300028792\|Ga0307504_10389117	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300028828\|Ga0307312_10431088	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	867	Open in IMG/M
3300028828\|Ga0307312_11183684	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300030006\|Ga0299907_10733781	All Organisms → cellular organisms → Bacteria	752	Open in IMG/M
(restricted) 3300031150\|Ga0255311_1058570	All Organisms → cellular organisms → Bacteria	814	Open in IMG/M
(restricted) 3300031197\|Ga0255310_10022343	All Organisms → cellular organisms → Bacteria	1628	Open in IMG/M
3300031720\|Ga0307469_10396978	All Organisms → cellular organisms → Bacteria	1176	Open in IMG/M
3300031720\|Ga0307469_10563934	All Organisms → cellular organisms → Bacteria	1011	Open in IMG/M
3300031720\|Ga0307469_12403837	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	514	Open in IMG/M
3300031740\|Ga0307468_101163343	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	692	Open in IMG/M
3300031740\|Ga0307468_102265257	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	527	Open in IMG/M
3300031740\|Ga0307468_102322920	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	521	Open in IMG/M
3300031858\|Ga0310892_10916111	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	614	Open in IMG/M
3300031908\|Ga0310900_10072008	All Organisms → cellular organisms → Bacteria	2119	Open in IMG/M
3300031940\|Ga0310901_10155787	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	879	Open in IMG/M
3300031949\|Ga0214473_10025225	All Organisms → cellular organisms → Bacteria → Proteobacteria	6961	Open in IMG/M
3300032075\|Ga0310890_11070475	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300032180\|Ga0307471_100087400	All Organisms → cellular organisms → Bacteria	2772	Open in IMG/M
3300032180\|Ga0307471_100215524	All Organisms → cellular organisms → Bacteria	1937	Open in IMG/M
3300032180\|Ga0307471_101108904	All Organisms → cellular organisms → Bacteria	957	Open in IMG/M
3300032180\|Ga0307471_101225998	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	914	Open in IMG/M
3300032205\|Ga0307472_100653017	All Organisms → cellular organisms → Bacteria	938	Open in IMG/M
3300032211\|Ga0310896_10071302	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1473	Open in IMG/M
3300033233\|Ga0334722_10468315	All Organisms → cellular organisms → Bacteria	906	Open in IMG/M
3300033432\|Ga0326729_1004293	All Organisms → cellular organisms → Bacteria	2786	Open in IMG/M
3300033433\|Ga0326726_11888537	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300033480\|Ga0316620_10163562	All Organisms → cellular organisms → Bacteria	1806	Open in IMG/M
3300033486\|Ga0316624_10891734	All Organisms → cellular organisms → Bacteria	796	Open in IMG/M
3300033500\|Ga0326730_1004860	All Organisms → cellular organisms → Bacteria	3071	Open in IMG/M
3300034090\|Ga0326723_0195946	All Organisms → cellular organisms → Bacteria	894	Open in IMG/M
3300034165\|Ga0364942_0021311	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2056	Open in IMG/M
3300034643\|Ga0370545_071137	All Organisms → cellular organisms → Bacteria	713	Open in IMG/M
3300034817\|Ga0373948_0048287	All Organisms → cellular organisms → Bacteria	908	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.06%
Host-Associated	Host-Associated	9.94%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	79.53%
Aquatic	Environmental → Aquatic	10.53%
Plants	Host-Associated → Plants	9.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	76.61%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.60%
Freshwater	Environmental → Aquatic → Freshwater	4.68%
Sediment	Environmental → Aquatic → Sediment	4.68%
Peat	Environmental → Terrestrial → Peat	2.34%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.34%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.17%
Floodplain	Environmental → Terrestrial → Floodplain	0.58%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	57.89%
Loam	Environmental → Terrestrial → Soil → Loam	12.28%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.02%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.68%
Sand	Environmental → Terrestrial → Soil → Sand	4.09%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.34%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.34%
Drinking Water	Environmental → Aquatic → Freshwater → Drinking Water	1.75%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.17%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.17%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.17%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.17%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.17%
Lake	Environmental → Aquatic → Freshwater → Lake	0.58%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.58%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.58%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.90%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	12.28%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	9.94%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.36%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.02%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.26%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.68%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	4.09%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.34%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.34%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.34%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.92%
Unchlorinated	Environmental → Aquatic → Freshwater → Drinking Water → Unchlorinated	1.75%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.17%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	1.17%
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	1.17%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.17%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.17%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.58%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.58%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.58%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.58%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.58%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	18.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	9.94%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.19%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	6.43%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.51%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.34%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.34%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	2.34%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.92%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	2.92%
Wastewater	Environmental → Aquatic → Freshwater → Drinking Water → Unchlorinated → Wastewater	1.75%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.75%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.17%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	1.17%
Thermal Springs	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs	1.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.17%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.17%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	1.17%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.17%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	1.17%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.17%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.17%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.17%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.58%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.58%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.58%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.58%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.58%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.58%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.58%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2140918013	Soil microbial communities from Great Prairies - Iowa soil (MSU Assemblies)	Environmental	Open in IMG/M
3300000571	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW60B uncontaminated upgradient, 5.4 m	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002681	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF120 (Metagenome Metatranscriptome, Counting Only)	Environmental	Open in IMG/M
3300002886	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005890	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_104	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009444	Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP3	Environmental	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009777	Wastewater microbial communities from Netherlands to study Microbial Dark Matter (Phase II) - VDW unchlorinated drinking water	Environmental	Open in IMG/M
3300009808	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_40_50	Environmental	Open in IMG/M
3300009813	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_10_20	Environmental	Open in IMG/M
3300009820	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_50_60	Environmental	Open in IMG/M
3300009822	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012493	Unplanted soil (control) microbial communities from North Carolina - M.Soil.10.yng.090610	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019877	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1	Environmental	Open in IMG/M
3300020022	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300022563	OV2_combined assembly	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025173	Wastewater microbial communities from Netherlands to study Microbial Dark Matter (Phase II) - VDW unchlorinated drinking water (SPAdes)	Environmental	Open in IMG/M
3300025312	Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 4 - CSP-I_5_4	Environmental	Open in IMG/M
3300025314	Soil microbial communities from Rifle, Colorado, USA - sediment 19ft 2	Environmental	Open in IMG/M
3300025322	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_1 (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300026005	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_0N_101 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026361	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-B	Environmental	Open in IMG/M
3300026514	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027835	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW60B uncontaminated upgradient, 5.4 m (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028673	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-B	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300031150 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH4_T0_E4	Environmental	Open in IMG/M
3300031197 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031940	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300033233	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_bottom	Environmental	Open in IMG/M
3300033432	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF6AY SIP fraction	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033480	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_B	Environmental	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M
3300033500	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF7AN SIP fraction	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M
3300034165	Sediment microbial communities from East River floodplain, Colorado, United States - 19_s17	Environmental	Open in IMG/M
3300034643	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_120 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034817	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
Iowa-Corn-GraphCirc_03263080	2140918013	Soil	MTRFIQLCASQNNLFALDEEGHVYQYHFNVRTWVKLAVTRDLQHEDGAAS
JGI1358J11329_100224755	3300000571	Groundwater	MGKFTQICASHNDLFALDEQGDVHQYNFDTKMWAKLVANHQSDKEKWGEG*
JGIcombinedJ26739_1009652202	3300002245	Forest Soil	MTRFIQLCASQNNLFALDEEGHVYQYHFNVRTWVKLAVTRDLQEDGAATS*
Ga0005471J37259_1083413	3300002681	Forest Soil	MTRFIQLCASQNNLFALDEEGHVYQYHFNVRTWVKLAATRDLQENG
JGI25612J43240_10517372	3300002886	Grasslands Soil	MTRFIQLCASQNNLFALDEEGHVYQYHFNVRTWVKLAVTRDVQQEDGAAS*
JGI25382J43887_101175853	3300002908	Grasslands Soil	KFIQICASQDDLFALDEVGNIHQYNFNAKTXVKLIASRSHEGRA*
Ga0062593_1000746505	3300004114	Soil	MTRFIQLCASQNNLFALDEEGHVYQYHFNVRTWVKLAVTRDLQHEDGAAS*
Ga0062594_1011376761	3300005093	Soil	RFIQLCASQNNLFALDEEGHVYQYHFNVRTWVKLAVTRDLQHEDGAAS*
Ga0066674_101928632	3300005166	Soil	MAKFIQICASQNDLFALDEEGVIYQYHFNAKTWVKLIGNRESDETGEGS*
Ga0066680_101600534	3300005174	Soil	MAKFIQICASQNDLFALDEEGVIYQYHFNAKTWVKLIGNRESDEKGQES*
Ga0070683_1006887931	3300005329	Corn Rhizosphere	HRMTRFIQLCASQNNLFALDEEGHVYQYHFNVRTWVKLAVTRDLQHEDGAAS*
Ga0070691_103298422	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MTRFIQLCASQNNLFALDEEGNVYQYHFNVKTWVKLAVTRDLSEADAS*
Ga0070709_102899913	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MTRFIQLCASQNNLFALDEEGHVYQYHFNVKAWVKLAVTRDLQEDGAPA*
Ga0070711_1005380912	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MTRFIQLCASQNNLFALDEEGHVYQYHFNVRTWVKLAATRDLQENGAATS*
Ga0070705_1015980192	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	FIQLCASQNNLFALDEEGHVYQYHFNVRTWVKLAVTRDVQQEDGAAS*
Ga0070708_10000336713	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MAKFIQICASQNDLFALDEEGVIYQYHFNAKTWVKLIGNRESDEKGEGS*
Ga0070708_1001034772	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MTRFIQLCASQNNLFALDEEGHVYQYHFNVRTWVKLAVTRDVQEDGAAS*
Ga0070708_1001947653	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MRKFIQVCASQNDLFALDEEGDVYQYHFNAKTWVKLVANRESDEGRGSTSSP*
Ga0066682_100106493	3300005450	Soil	MAKFIQICASQNDLFALDEEGVIYQYHFNAKTWVKLIGNRESDETGEGP*
Ga0070706_1010160271	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	SPAPTKFIQICASQNDLFALDKEGNIYQYNFNAKAWIKLVASRSYEEPA*
Ga0070707_1000621302	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MDKFIQICASQNDLFALDQEGVIYQYHFNAKTWVKLTSNRESDEKGQES*
Ga0070704_1009882103	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	SEAPTQFIQICASQNDLFALDKEGKIYQYNFNAKAWVKLGTSRSYEEHA*
Ga0066701_100496995	3300005552	Soil	CASQDDLFALDEVGNIHQYNFNAKTWVKLIASRSHEGRA*
Ga0066707_100033241	3300005556	Soil	ICASQDDLFALDEVGNIHQYNFNAKTWVKLIASRSHEGRA*
Ga0066694_101756771	3300005574	Soil	MAKFIQICASQNDLFALDEEGVIYQYHFNAKTWVKLIGNRESDETGEG
Ga0066691_100476615	3300005586	Soil	SQAPAKFIQICASQDDLFALDEVGNIHQYNFNAKTWVKLIASRSHEGRA*
Ga0068859_1000062249	3300005617	Switchgrass Rhizosphere	MTRFIQLCASQNNLFALDEEGHVYQYHFNVRTWVKLAVTR
Ga0075285_10083913	3300005890	Rice Paddy Soil	MTRFIQLCASQNNLFALDEEGNVYQYHFNVKTWVKLAVTRDLSE
Ga0066651_100892923	3300006031	Soil	MAKFIQICASQNDLFALDEEGVIYQYHFNAKTWVKLIGNRESDEKGQGS*
Ga0075023_1000328852	3300006041	Watersheds	MTRFIQLCASQNNLFALDEEGHVYQYHFNVRTWVKLAVTRDVQEDGAPS*
Ga0075023_1003792062	3300006041	Watersheds	MTRFIQLCASQNNLFALDEEGNVYQYHFNVKTWVKLATNREQQEERP*
Ga0075024_1001020082	3300006047	Watersheds	MTKFIQMCASQNNLFALDEEGNVYQYHFNVKTWVKLAANREQQEERP*
Ga0079222_100101674	3300006755	Agricultural Soil	MTRFIQLCASQNNLFALDEEGHVYQYHFNVKAWVKLAVTRDLQEDGAPG*
Ga0079222_108426992	3300006755	Agricultural Soil	MTRFIQLCASQNNLFALDEEGHVYQYHFNVRTWVKLAVTRDLQQEDGAAS*
Ga0066658_100090305	3300006794	Soil	MAKFIQICASQNDLCALDEEGVIYQYHFNAKTWVKLIGNRESDETGEGS*
Ga0079221_105326562	3300006804	Agricultural Soil	PAPTKFIQICASQDDLFALDKEGNIYQYNFNAKAWIKLVASRSYEEPA*
Ga0079220_119719972	3300006806	Agricultural Soil	MTRFIQLCASQNNLFALDEEGHVYQYHFNVKAWVKLAVTRDLQHEDGAAS*
Ga0075430_1012975812	3300006846	Populus Rhizosphere	MPKFIQICASNDDLFALDGEGNVYQFDFSAKAWVKLAAGRARDTRA*
Ga0075433_105043663	3300006852	Populus Rhizosphere	FIQICASQNDLFALDKEGHIYQYNFNAKTWVKLGASRSYEEHA*
Ga0075425_1000408041	3300006854	Populus Rhizosphere	FIQLCASQNNLFALDEEGHVYQYHFNVKAWVKLAVTRDLQEDGAPA*
Ga0075425_1017065871	3300006854	Populus Rhizosphere	RMTRFIQLCASQNNLFALDEEGHVYQYHFNVKAWVKLAVTRDLQEDGAPA*
Ga0075434_1006989082	3300006871	Populus Rhizosphere	IQLCASQNNLFALDEEGHVYQYHFNVRTWVKLAATRDLQENGAATS*
Ga0075434_1016343682	3300006871	Populus Rhizosphere	MAKFIQICASQNDLFALDEEGVIYQYHFNAKTWVKLIGNRESDEGGQGS*
Ga0079219_109572501	3300006954	Agricultural Soil	MTRFIQLCASQNNLFALDEEGNVYQYHFNVKTWVKLTATRELPTEGAA*
Ga0099791_100409872	3300007255	Vadose Zone Soil	MTRFIQLCASQNNLFALDEEGHVYQYHFNVRTWVKLAITRDVQEDGAAS*
Ga0099791_101600792	3300007255	Vadose Zone Soil	MGKFIQICASQNDLFALDEEGVIYQYHFNAKTWVKLIGNRESDETGQGS*
Ga0099791_105740571	3300007255	Vadose Zone Soil	MRKFIQVCASQNDLFALDEEGDVYQYHFNAKTWVKLVANRESDEGRG
Ga0099829_100090794	3300009038	Vadose Zone Soil	MAKFIQICASQNDLFALDEDGVIYQYHFNAKTWVKLIGNRESDEKGEGA*
Ga0099829_101405663	3300009038	Vadose Zone Soil	VAKFIQICASQDDLFALDEEGNIYQYNFNAQTWVKLAVGRSDEEPV*
Ga0099828_101022054	3300009089	Vadose Zone Soil	MAKFIQICASQNDLFALDEEGVIYQYHFNAKTWVKLIGNRESDEKGEGA*
Ga0099828_113593671	3300009089	Vadose Zone Soil	MAKFIQICASQNDVFALDEEGDIHQYHFNVKTWVKLRATRELEDGRGLAK
Ga0099827_109081081	3300009090	Vadose Zone Soil	MRKFIQVCASQNDLFALDEEGDVYQYHFNAKTWVKLVANRESDEGRGSALSP*
Ga0105240_112582761	3300009093	Corn Rhizosphere	MTRFIQLCASQNNLFALDEEGHVYQYHFNVRTWVKLAVT
Ga0111538_139444762	3300009156	Populus Rhizosphere	MTRFIQLCASQNNLFALDEEGHVYQYHFNVRTWVKLAVTRDLQQEGGAAS*
Ga0075423_125821901	3300009162	Populus Rhizosphere	PAKFIQICASQNDLFALDKGGNIYQYDFNAKTWGKLVASRSMDSR*
Ga0114945_100263763	3300009444	Thermal Springs	MGKFIQICASHNDLFALDEQGDVHQYNFDTKKWVKLVANRQSDEEKWGAG*
Ga0105249_120407611	3300009553	Switchgrass Rhizosphere	MTRFVQICASQNDLFALDAEGDIHQYHFNAKTWVKLTANRESEEG
Ga0105164_100501682	3300009777	Wastewater	MAKFIQICASQDDLFALDEEGNIYQYNFNAKTWVKLAAGRSDEEPV*
Ga0105164_104414652	3300009777	Wastewater	MGKFIQICASHNDLFALDEQGDVHQYNFDTKMWTKLVANHQSDKEKWSAD*
Ga0105071_10034744	3300009808	Groundwater Sand	GTVSQAPRKFIQICASQNDLFALDAEGNIYQYNFNAKAWAKLVASRS*
Ga0105057_10753862	3300009813	Groundwater Sand	FGTVSQAPRKFIQICASQNDLFALDAEGNIYQYNFNAKAWAKLVASRS*
Ga0105085_11075251	3300009820	Groundwater Sand	QAPAKFIQICASQDDLFALDAEGNISQYNFNEKTWVKLVASRSYEGRTSNP*
Ga0105066_10130571	3300009822	Groundwater Sand	QICASQNDLFALDAEGNIYQYNFNAKAWAKLVASRS*
Ga0105066_10659742	3300009822	Groundwater Sand	MAKFIQICASQDDLFALDEEGKIYQYNFNAKTWVQLVAGRSYDV*
Ga0134080_101889212	3300010333	Grasslands Soil	MEKFIQICASQNDLFALDEEGVIYQYHFNAKTWVKLICNRESDETGEGS*
Ga0150983_129984071	3300011120	Forest Soil	AGGSPMTRFIQLCASQNNLFALDEEGHVYQYHFNVKAWVKLAVTRDLQEDEAPA*
Ga0137391_103881921	3300011270	Vadose Zone Soil	MRKFIQLCASQNDLFALDEEGDVYQYHFNAKTWVKLVANRESDEGRGSAPSP*
Ga0137389_111713212	3300012096	Vadose Zone Soil	MAKFIQICASQDDLFALDDAGNIYQYNFNAQTWVKLAVGRSDEEPV*
Ga0137388_105997181	3300012189	Vadose Zone Soil	MRKFIQVCASQNDLFALDEEGDVYQYHFNAKTWVKLVADRESDEGRGSAPSP*
Ga0137365_102027844	3300012201	Vadose Zone Soil	MGKFIQICASQNDLFALDEEGVIYQYHFNAKTWVKLIGNRES
Ga0137399_117695182	3300012203	Vadose Zone Soil	MAKFIQICASQNDLFALDEEGVIYQYHFNAKTWVKLIGNRESGEKGQES*
Ga0137374_100096802	3300012204	Vadose Zone Soil	VTKFIQICASQDDLFALDEEGNVHQYNFNAKTWIKLVASRAHEESA*
Ga0137362_110642561	3300012205	Vadose Zone Soil	MAKLIQVCASLNALFALDEEGNIYQYHFKSKTWVKLVATRESEEKSK*
Ga0137362_113148351	3300012205	Vadose Zone Soil	MDKFIQICASQNDLFALDEEGVIYQYHFNAKTWVKLIGNRESDETGQGS*
Ga0137377_100303791	3300012211	Vadose Zone Soil	MTRFIQLCASQNNLFALDEEGHVYQYHFNVRTWVKLAVTRDVQEDG
Ga0137386_100833684	3300012351	Vadose Zone Soil	MAKFIQICASQNDLFALDEEGVIYQYHFNAKTWVKLIGSRESDEKGQGS*
Ga0137385_100246938	3300012359	Vadose Zone Soil	KFIQICASQNDLFALDEEGVIYQYHFNAKTWVKLIGNRESDEKGQES*
Ga0137375_114672991	3300012360	Vadose Zone Soil	PAKFIQICASQDDLFALDGEGNIYQYNFNEKTWGKLVASRSHEGRT*
Ga0157355_10302352	3300012493	Unplanted Soil	MTKFIQLCASQNNLFALDEEGNVYQYHFNVKTWVKLTATRELPTEGAA*
Ga0137395_103076003	3300012917	Vadose Zone Soil	MGRFIQICASQNDLFSLDEEGVIYQYHFNAKTWVKLIGNRESDETGQGS*
Ga0137396_102100151	3300012918	Vadose Zone Soil	MAKFIQICASQNDLFALDEEGVIYQYHFNAKTWVKLIGNRESDERGQES*
Ga0137396_102914292	3300012918	Vadose Zone Soil	MTRFIQLCASQNNLFALDEEGHVYEYHFNVRTWVKLAVTRDVQEDGAAS*
Ga0137416_101273773	3300012927	Vadose Zone Soil	MGKFIQICASQNDLFALDEEGVIYQYHFNAKTWVKLIGNRESDEKGQES*
Ga0164304_100130062	3300012986	Soil	MTRFIQLCASQNNLFALDEEGHVYQYHFNVRTWVKLAVTRDVQQEDGAATS*
Ga0132257_1029953652	3300015373	Arabidopsis Rhizosphere	MTRFIQLCASQNNLFALDEEGHMYQYHFNVRTWVKLAVTRDLQHEDGAAS*
Ga0132255_1016235503	3300015374	Arabidopsis Rhizosphere	MTKFIQLCASQNNLFALDEEGNVYQYHFNVKTWVKLTSTRELPT
Ga0187824_100531343	3300017927	Freshwater Sediment	MTRFIQLCASQNNLFALDEEGNVYQYHFNVKTWVKLTATRELPTEGAA
Ga0187821_100509672	3300017936	Freshwater Sediment	MTRFIQLCASQNNLFALDEEGNVYQYHFNVKTWVKLTATRELPAEGAA
Ga0184626_101123702	3300018053	Groundwater Sediment	APAKFIQICASQDDLFALDAEGSIHQYNFNAKTWVKLVASRSHEGRT
Ga0184640_101158243	3300018074	Groundwater Sediment	MTKFIQLCASQNNLFALDEEGDVYQYHFNVKTWVKLAANRELHEESP
Ga0184633_103869082	3300018077	Groundwater Sediment	MAKFIQICASQDDLFALDEEGNIYQFNFNAKTWVKLVASRSDEEPV
Ga0190265_102732234	3300018422	Soil	MTKFVQICASQNNLFALDENGEVYQYHFNVKTWVKLAAERELQEERQE
Ga0066655_101655082	3300018431	Grasslands Soil	MAKFIQICASQNDLFALDEEGVIYQYHFNAKTWVKLIGNRESDETGEGS
Ga0066662_106091983	3300018468	Grasslands Soil	MAKFIQICASQNDLFALDEEGVIYQYHFNAKTWVKLIGNRESD
Ga0193722_10634532	3300019877	Soil	MTRFIQLCASQNNLFALDEEGHVYQYHFNVRTWVKLAVTRDVQQEDGAATS
Ga0193733_11170352	3300020022	Soil	MDKFIQICASQNDLFALDEEGTVYQYHFNAKTWVKLTSNRESDEKGQES
Ga0179596_100150402	3300021086	Vadose Zone Soil	MTRFIQLCASQNNLFALDEEGHVYQYHFNVRTWVKLAVTRDVQEDGAAS
Ga0210397_114293881	3300021403	Soil	RFIQLCASQNNLFALDEEGHVYQYHFNVRTWVKLAATRDLQENGAATS
Ga0212128_100656043	3300022563	Thermal Springs	MGKFIQICASHNDLFALDEQGDVHQYNFDTKKWVKLVANRQSDEEKWGAG
Ga0137417_10521432	3300024330	Vadose Zone Soil	MAKFIQICASQNDLFALDEEGVIYQYHFNAKTWVKLIGNRESDERGQES
Ga0137417_13191354	3300024330	Vadose Zone Soil	MAKFIQICASQNDLFALDEEGVIYQYHFNAKTWVKLIGNRESGEKGQES
Ga0209824_1000541010	3300025173	Wastewater	MAKFIQICASQDDLFALDEEGNIYQYNFNAKTWVKLAAGRSDEEPV
Ga0209321_102064931	3300025312	Soil	AKFIQICASQDDLFALDEGGNIYQYDFNAKTWVKLVTSRGSMDSRGK
Ga0209323_103722802	3300025314	Soil	MGKLIQICASQNDLFALDEEGEVFQYNFNTKTWVKLVTSRGSMDSRGK
Ga0209641_109550072	3300025322	Soil	IQICASQNDLFALDEGGNIYQYNFNAKTWVKLVASRSYEGRAGAETVSRSEDYR
Ga0207684_102056023	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MRKFIQVCASQNDLFALDEEGDVYQYHFNAKTWVKLVANRESDEGRGSTSSP
Ga0207684_109863371	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MAKFIQICASQNDLFALDEEGVIYQYHFNAKTWVKLIGNRESDEKGEGS
Ga0207671_102246932	3300025914	Corn Rhizosphere	VSRQEDHRMTRFIQLCASQNNLFALDEEGHVYQYHFNVRTWVKLAVTRDLQHEDGAAS
Ga0207646_101758334	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MDKFIQICASQNDLFALDQEGVIYQYHFNAKTWVKLTSNRESDEKGQES
Ga0207665_106289922	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MKKLIQICASQNDLFALDKEGNIYQYNFNAKAWIKLVASRSYEEPA
Ga0207661_102472472	3300025944	Corn Rhizosphere	ARVSRQEDHRMTRFIQLCASQNNLFALDEEGHVYQYHFNVRTWVKLAVTRDLQHEDGAAS
Ga0208285_10001133	3300026005	Rice Paddy Soil	MTRFIQLCASQNNLFALDEEGNVYQYHFNVKTWVKLAVTRDLSEADAS
Ga0209152_101120201	3300026325	Soil	IQICASQNDLFALDKEGNIYQYNFNAKAWIKLVASRSYEEPA
Ga0209375_10271655	3300026329	Soil	MAKFIQICASQNDLFALDEEGVIYQYHFNAKTWVKLIGNRESDETGEGP
Ga0209803_11997023	3300026332	Soil	QICASQNDLFALDKEGNIYQYNFNAKAWIKLVASRSYEEPA
Ga0209803_12347043	3300026332	Soil	QICASQNDLFALDKKGNVYQYNFNAKAWTQLVASRSYEEHASA
Ga0209057_10418161	3300026342	Soil	KFIQICASQNDLFALDKEGNIYQYNFNAKAWIKLVASRSYEEPA
Ga0257176_10080242	3300026361	Soil	MAKFIQICASQNDLFALDEEGVIYQYHFNAKTWVKLIGNRESDEKGEGA
Ga0257176_10632262	3300026361	Soil	MAKFIQVCASHNALFALDEEGDVYQYHFNSKTWVKLVATRASEE
Ga0257168_10210911	3300026514	Soil	MTRFIQLCASQNNLFALDEEGHVYQYHFNVRTWVKLAVTRDVQQEDAAAS
Ga0257168_10755552	3300026514	Soil	MAKFIQICASQNDLFALDEEGVIYQYHFNAKTWVKLTSNRESDEKGQE
Ga0209690_11242961	3300026524	Soil	QICASQDDLFALDEVGNIHQYNFNAKTWVKLIASRSHEGRA
Ga0209056_105782001	3300026538	Soil	MAKFIQICASQNDLFALDEEGVIYQYHFNAKTWVKLIGNRESDEKGQGS
Ga0209388_11037111	3300027655	Vadose Zone Soil	MTRFIQLCASQNNLFALDEEGHVYQYHFNVRTWVKLAITRDVQEDGAAS
Ga0209177_101301682	3300027775	Agricultural Soil	MTRFIQLCASQNNLFALDEEGHVYQYHFNVRTWVKLAVTRDLQQEDGAAS
Ga0209177_102539512	3300027775	Agricultural Soil	MTRFIQLCASQNNLFALDEEGHVYQYHFNVKAWVKLAVTRDLQEDGAPG
Ga0209515_100898562	3300027835	Groundwater	MGKFTQICASHNDLFALDEQGDVHQYNFDTKMWAKLVANHQSDKEKWGEG
Ga0209180_100419543	3300027846	Vadose Zone Soil	MAKFIQICASQNDLFALDEDGVIYQYHFNAKTWVKLIGNRESDEKGEGA
Ga0209283_101587263	3300027875	Vadose Zone Soil	VAKFIQICASQDDLFALDEVGNIYQYKFNAQTWVKLAVGRSDEEPV
Ga0209481_106793241	3300027880	Populus Rhizosphere	MTRFVQICASQNDLFALDAEGDIHQYHFNAKTWVKLTANRESEEGVPTGVT
Ga0209590_105302531	3300027882	Vadose Zone Soil	MAKFIQICASQNDLFALDEEGVIYQYHFNAKTWVKLIGNRESDEKGQES
Ga0209068_100076595	3300027894	Watersheds	MTRFIQLCASQNNLFALDEEGHVYQYHFNVRTWVKLAVTRDVQEDGAPS
Ga0209069_102878242	3300027915	Watersheds	MTKFIQMCASQNNLFALDEEGNVYQYHFNVKTWVKLAANREQQEERP
Ga0209526_101687842	3300028047	Forest Soil	MGKFIQICASQNDLFALDEEGVIYQYHFNAKTWVKLIGNRESDEKGQAS
Ga0268264_123489952	3300028381	Switchgrass Rhizosphere	MTRFVQICASQNDLFALDAEGDIHQYHFNAKTWVKLTANRESEEGVPTGVTRRQ
Ga0137415_100428355	3300028536	Vadose Zone Soil	MGKFIQICASQNDLFALDEEGVIYQYHFNAKTWVKLIGNRESGEKGQES
Ga0257175_10346203	3300028673	Soil	MTRFIQLCASQNNLFALDEEGHVYQYHFNVRTWVKLAVTRD
Ga0307504_101214422	3300028792	Soil	MTRFIQLCASQNNLFALDEEGHVYQYHFNVRTWVKLAVTRDVLEDGAAS
Ga0307504_103891171	3300028792	Soil	MGDQRMTKFIQMCASQNNLFALDEEGNVYQYHFNVKTWVKLAANREQQEERP
Ga0307312_104310881	3300028828	Soil	MDKFIQICASQNDLFALDEEGTVYQYHFNAKTWVKLTSNRESDEKGQE
Ga0307312_111836841	3300028828	Soil	HYGGSGMAKFIQVCASHSALFALDEEGDVYQYHFNSKTWVKLVAARASEEKSK
Ga0299907_107337811	3300030006	Soil	MAKFIQVCASQNDLFALDDEGNVFQYNFSTKTWIKLRMSRAPDE
(restricted) Ga0255311_10585702	3300031150	Sandy Soil	MTKFIQLCASQNNLFALDEEGNVYQYHFNVKTWVKLTATRELPAEGAA
(restricted) Ga0255310_100223433	3300031197	Sandy Soil	MGGQRMTKFIQMCASQNNLFALDEEGNVYQYHFNVKTWVKLTATRELPAEGAA
Ga0307469_103969783	3300031720	Hardwood Forest Soil	IQICASQDDLFALDDEGNIHQYNFNAKTWVKLVASRSHEGRT
Ga0307469_105639341	3300031720	Hardwood Forest Soil	MMKFVQLCASQNDLFALDENGSVYQYHFNVKTWVKLSANRESEEKTS
Ga0307469_124038372	3300031720	Hardwood Forest Soil	KFIQICASQNDLFALDEEGNIYQYNFNAKAWAKLVASRSYE
Ga0307468_1011633433	3300031740	Hardwood Forest Soil	QNDLFALDKEGNIYQYNFNAKAGVKLGTSHAYEEHA
Ga0307468_1022652571	3300031740	Hardwood Forest Soil	NDLFALDKEGNVYRYNFNAKAWTQFVASRSYDEHA
Ga0307468_1023229201	3300031740	Hardwood Forest Soil	CASQNDLFALDKVGSIYQYNFNAKAWVKLGASRSYEEHA
Ga0310892_109161113	3300031858	Soil	LRTVSQAPTQFIQICASQNDLFALDKEGNIYQYNFNAKAWVKLGTSRSYEEHA
Ga0310900_100720086	3300031908	Soil	APTQFIQICASQNDLFALDKDGSIYQYNFNAKAWVKLGTSRSYEEHA
Ga0310901_101557873	3300031940	Soil	RTVSQTPTQFIQICASQNDLFALDKEGNIYQYNFNAKAWVKLGTSRSYEEHA
Ga0214473_100252252	3300031949	Soil	MAKFIQICASQNDVFALDEEGDIYQYHFNVKTWVKLIATRELEERSP
Ga0310890_110704752	3300032075	Soil	SARVSRQEDHRMTRFIQLCASQNNLFALDEEGHVYQYHFNVRTWVKLAATRDLQENGAAT
Ga0307471_1000874002	3300032180	Hardwood Forest Soil	MDKFIQICASQNDLFALDEKGVIYQYHFNAKTWVKLTGNRESDETGQGS
Ga0307471_1002155241	3300032180	Hardwood Forest Soil	EDHRMTRFIQLCASQNNLFALDEEGHVYQYHFNVKAWVKLAVTRDLQEDGAPA
Ga0307471_1011089041	3300032180	Hardwood Forest Soil	MRKFIQVCASQNDLFALDEEGNVYQYHFNAKTWVKLVANRESDEGR
Ga0307471_1012259981	3300032180	Hardwood Forest Soil	GTVSQAPTQFIQICASQNDLFALDKDGNVYQYNFNAKAWIKLGASRSYEEHA
Ga0307472_1006530172	3300032205	Hardwood Forest Soil	MMKFVQLCASQNDLFALDEEGSVYQYHFNVKTWVKLIATRESAEAGRGATE
Ga0310896_100713021	3300032211	Soil	QICASQNDLFALDKDGSIYQYNFNAKAWVKLGTSRSYEEHA
Ga0334722_104683151	3300033233	Sediment	MAKFIQICASQNDLFALDEEGNIYQYNFNAKTWVKLVAGRSDEEPV
Ga0326729_10042936	3300033432	Peat Soil	MTKFIQLCASQNNLFALDEEGDVYQYHFNVRTWVKLTATRELTATRELPAEGAA
Ga0326726_118885372	3300033433	Peat Soil	MTKFIQLCASQNNLFALDEEGDVYQYHFNVRTWVKLTATRELPAEGAA
Ga0316620_101635622	3300033480	Soil	MTKFIQLCASQNNLFALDEEGNVYQYHFNVKTWVKLAVTRDLAEAGAS
Ga0316624_108917341	3300033486	Soil	FIQLCASQNNLFALDEEGNVYQYHFNVKTWVKLTATRELPAEGAA
Ga0326730_10048606	3300033500	Peat Soil	QLCASQNNLFALDEEGDVYQYHFNVRTWVKLTATRELTATRELPAEGAA
Ga0326723_0195946_755_892	3300034090	Peat Soil	MTRFIQLCASQNNLFALDEEGNVYQYHFNVKTWVKLTATRELPAEG
Ga0364942_0021311_1584_1742	3300034165	Sediment	MGDQRMTKFIQLCASQNNLFALDEEGDVYQYHFNVKTWVKLAANRELHEESP
Ga0370545_071137_1_138	3300034643	Soil	VKEKAMAKFIQICASQNDLFALDEEGDIHRYDFKVRTWGKLTAGRR
Ga0373948_0048287_633_782	3300034817	Rhizosphere Soil	MTRFIQLCASQNNLFALDEEGHVYQYHFNVRAWVKLAVTRDVKEDGAAS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters