Metagenome / Metatranscriptome Family F035820

Basic Information
Family ID	F035820
Family Type	Metagenome / Metatranscriptome
Number of Sequences	171
Average Sequence Length	44 residues
Representative Sequence	LAKLGSLTNLRAVRDPSSDTGWKIELGPFPGWRDVPTW
Number of Associated Samples	93
Number of Associated Scaffolds	171

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	5.26 %
% of genes near scaffold ends (potentially truncated)	90.64 %
% of genes from short scaffolds (< 2000 bps)	95.91 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Most Common Taxonomy
Group	Bacteria (92.398 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil (33.333 % of family members)
Environment Ontology (ENVO)	Unclassified (35.088 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (50.292 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 21.21% Coil/Unstructured: 78.79%
Feature Viewer

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Pfam ID	Name	% Frequency in 171 Family Scaffolds
PF00069	Pkinase	7.60
PF13620	CarboxypepD_reg	7.02
PF13635	DUF4143	6.43
PF01850	PIN	4.09
PF05016	ParE_toxin	2.92
PF08309	LVIVD	2.92
PF07676	PD40	2.34
PF01934	HepT-like	2.34
PF13470	PIN_3	1.75
PF00400	WD40	1.75
PF01402	RHH_1	1.75
PF01909	NTP_transf_2	1.75
PF07927	HicA_toxin	1.75
PF02604	PhdYeFM_antitox	1.17
PF04365	BrnT_toxin	1.17
PF15919	HicB_lk_antitox	1.17
PF00486	Trans_reg_C	1.17
PF01408	GFO_IDH_MocA	1.17
PF08843	AbiEii	0.58
PF14437	MafB19-deam	0.58
PF01118	Semialdhyde_dh	0.58
PF01927	Mut7-C	0.58
PF16277	DUF4926	0.58
PF05168	HEPN	0.58
PF07715	Plug	0.58
PF14384	BrnA_antitoxin	0.58
PF16347	DUF4976	0.58
PF02661	Fic	0.58
PF13581	HATPase_c_2	0.58
PF02673	BacA	0.58
PF13614	AAA_31	0.58
PF06769	YoeB_toxin	0.58
PF02452	PemK_toxin	0.58
PF01654	Cyt_bd_oxida_I	0.58
PF03007	WES_acyltransf	0.58
PF04014	MazE_antitoxin	0.58
PF03465	eRF1_3	0.58
PF13173	AAA_14	0.58
PF05193	Peptidase_M16_C	0.58

COG ID	Name	Functional Category	% Frequency in 171 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	30.41
COG5276	Uncharacterized secreted protein, contains LVIVD repeats, choice-of-anchor domain	Function unknown [S]	2.92
COG2361	HEPN domain protein, predicted toxin of MNT-HEPN system	Defense mechanisms [V]	2.34
COG2445	Uncharacterized HEPN domain protein YutE, UPF0331/DUF86 family	General function prediction only [R]	2.34
COG1724	Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family	General function prediction only [R]	1.75
COG2161	Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family	Defense mechanisms [V]	1.17
COG2929	Ribonuclease BrnT, toxin component of the BrnT-BrnA toxin-antitoxin system	Defense mechanisms [V]	1.17
COG4118	Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressor	Defense mechanisms [V]	1.17
COG1271	Cytochrome bd-type quinol oxidase, subunit 1	Energy production and conversion [C]	0.58
COG1656	Uncharacterized conserved protein, contains PIN-related Mut7-C RNAse domain	General function prediction only [R]	0.58
COG1895	HEPN domain protein, predicted toxin of MNT-HEPN system	Defense mechanisms [V]	0.58
COG1968	Undecaprenyl pyrophosphate phosphatase	Lipid transport and metabolism [I]	0.58
COG2250	HEPN domain protein, predicted toxin of MNT-HEPN system	Defense mechanisms [V]	0.58
COG2253	Predicted nucleotidyltransferase component of viral defense system	Defense mechanisms [V]	0.58
COG2337	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	Defense mechanisms [V]	0.58
COG4115	Toxin component of the Txe-Axe toxin-antitoxin module, Txe/YoeB family	Defense mechanisms [V]	0.58
COG4908	Uncharacterized conserved protein, contains a NRPS condensation (elongation) domain	General function prediction only [R]	0.58

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	92.40 %
Unclassified	root	N/A	7.60 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	92.40 %
Unclassified	root	N/A	7.60 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	92.40 %
Unclassified	root	N/A	7.60 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	41.52 %
Unclassified	root	N/A	7.60 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.09 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.34 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.17 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.58 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.58 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.58 %

Name	Rank	Taxonomy	Distribution
Holophagae	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae	23.98 %
Unclassified	root	N/A	7.60 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	6.43 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.17 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	1.17 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.58 %
Thermoanaerobaculia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia	0.58 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.58 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.58 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.58 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.58 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.58 %
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	0.58 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.58 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.58 %

Name	Rank	Taxonomy	Distribution
unclassified Holophagae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → unclassified Holophagae	23.39 %
Unclassified	root	N/A	7.60 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.43 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1.17 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	1.17 %
Candidatus Brocadiia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia	0.58 %
Thermoanaerobaculales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales	0.58 %
candidate division KSB1	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division KSB1	0.58 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.58 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.58 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	0.58 %
Holophagales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales	0.58 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.58 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.58 %
Dehalococcoidia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	0.58 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	0.58 %

Name	Rank	Taxonomy	Distribution
Holophagae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → unclassified Holophagae → Holophagae bacterium	23.39 %
Unclassified	root	N/A	7.60 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.43 %
Woeseiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Woeseiaceae	1.17 %
Candidatus Sulfomarinibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Candidatus Sulfomarinibacteraceae	0.58 %
unclassified Holophagales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → unclassified Holophagales	0.58 %
unclassified Bryobacterales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales	0.58 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.58 %
Synechococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales	0.58 %
Candidatus Brocadiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales	0.58 %
unclassified candidate division KSB1	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division KSB1 → unclassified candidate division KSB1	0.58 %
Nitrospiraceae	family	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	0.58 %
Dehalogenimonas	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalogenimonas	0.58 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	0.58 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	0.58 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.58 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.58 %

Name	Rank	Taxonomy	Distribution
Holophagae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → unclassified Holophagae → Holophagae bacterium	23.39 %
Unclassified	root	N/A	7.60 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.43 %
Woeseia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Woeseiaceae → Woeseia	1.17 %
Prochlorococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae	0.58 %
Candidatus Sulfomarinibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Candidatus Sulfomarinibacteraceae → Candidatus Sulfomarinibacter	0.58 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.58 %
Holophagales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → unclassified Holophagales → Holophagales bacterium	0.58 %
candidate division KSB1 bacterium RBG_16_48_16	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division KSB1 → unclassified candidate division KSB1 → candidate division KSB1 bacterium RBG_16_48_16	0.58 %
Dehalogenimonas alkenigignens	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalogenimonas → Dehalogenimonas alkenigignens	0.58 %
Nitrospira	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	0.58 %
Nostocaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae	0.58 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	0.58 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.58 %
Candidatus Brocadiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales	0.58 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.58 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.58 %

Name	Rank	Taxonomy	Distribution
Holophagae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → unclassified Holophagae → Holophagae bacterium	23.39 %
Unclassified	root	N/A	7.60 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.43 %
unclassified Woeseia	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Woeseiaceae → Woeseia → unclassified Woeseia	1.17 %
Candidatus Sulfomarinibacter kjeldsenii	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Candidatus Sulfomarinibacteraceae → Candidatus Sulfomarinibacter → Candidatus Sulfomarinibacter kjeldsenii	0.58 %
Gemmatimonas	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas	0.58 %
Cyanobium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Cyanobium	0.58 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.58 %
Holophagales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → unclassified Holophagales → Holophagales bacterium	0.58 %
candidate division KSB1 bacterium RBG_16_48_16	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division KSB1 → unclassified candidate division KSB1 → candidate division KSB1 bacterium RBG_16_48_16	0.58 %
Dehalogenimonas alkenigignens	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalogenimonas → Dehalogenimonas alkenigignens	0.58 %
Nitrospira	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	0.58 %
Nostocaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae	0.58 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.58 %
Candidatus Brocadiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales	0.58 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.58 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.58 %

Name	Rank	Taxonomy	Distribution
Holophagae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → unclassified Holophagae → Holophagae bacterium	23.39 %
Unclassified	root	N/A	7.60 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.43 %
Woeseia sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Woeseiaceae → Woeseia → unclassified Woeseia → Woeseia sp.	1.17 %
unclassified Cyanobium	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Cyanobium → unclassified Cyanobium	0.58 %
Candidatus Sulfomarinibacter kjeldsenii	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Candidatus Sulfomarinibacteraceae → Candidatus Sulfomarinibacter → Candidatus Sulfomarinibacter kjeldsenii	0.58 %
Gemmatimonas	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas	0.58 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.58 %
Holophagales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → unclassified Holophagales → Holophagales bacterium	0.58 %
candidate division KSB1 bacterium RBG_16_48_16	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division KSB1 → unclassified candidate division KSB1 → candidate division KSB1 bacterium RBG_16_48_16	0.58 %
Dehalogenimonas alkenigignens	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalogenimonas → Dehalogenimonas alkenigignens	0.58 %
Nitrospira	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	0.58 %
Nostocaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae	0.58 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.58 %
Candidatus Brocadiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales	0.58 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.58 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.58 %

Name	Rank	Taxonomy	Distribution
Holophagae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → unclassified Holophagae → Holophagae bacterium	23.39 %
Unclassified	root	N/A	7.60 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.43 %
Woeseia sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Woeseiaceae → Woeseia → unclassified Woeseia → Woeseia sp.	1.17 %
Cyanobium sp. N.Huapi 1H5	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Cyanobium → unclassified Cyanobium → Cyanobium sp. N.Huapi 1H5	0.58 %
Candidatus Sulfomarinibacter kjeldsenii	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Candidatus Sulfomarinibacteraceae → Candidatus Sulfomarinibacter → Candidatus Sulfomarinibacter kjeldsenii	0.58 %
Gemmatimonas	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas	0.58 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.58 %
Holophagales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → unclassified Holophagales → Holophagales bacterium	0.58 %
candidate division KSB1 bacterium RBG_16_48_16	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division KSB1 → unclassified candidate division KSB1 → candidate division KSB1 bacterium RBG_16_48_16	0.58 %
Dehalogenimonas alkenigignens	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalogenimonas → Dehalogenimonas alkenigignens	0.58 %
Nitrospira	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	0.58 %
Nostocaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae	0.58 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.58 %
Candidatus Brocadiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales	0.58 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.58 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.58 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001213\|JGIcombinedJ13530_101645974	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	678	Open in IMG/M
3300001547\|JGI20215J15232_1049481	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300002822\|BMAI_1029547	All Organisms → cellular organisms → Bacteria → Acidobacteria	1054	Open in IMG/M
3300002822\|BMAI_1139259	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
3300003988\|Ga0055475_10232898	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Cyanobium → unclassified Cyanobium → Cyanobium sp. N.Huapi 1H5	584	Open in IMG/M
3300004023\|Ga0055441_10088132	All Organisms → cellular organisms → Bacteria → Acidobacteria	772	Open in IMG/M
3300004030\|Ga0055444_10214507	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	720	Open in IMG/M
3300004051\|Ga0055492_10143979	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → unclassified Holophagae → Holophagae bacterium	564	Open in IMG/M
3300004061\|Ga0055487_10106673	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → unclassified Holophagae → Holophagae bacterium	515	Open in IMG/M
3300004065\|Ga0055481_10353159	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → unclassified Holophagae → Holophagae bacterium	624	Open in IMG/M
3300005219\|Ga0069004_10205643	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → unclassified Holophagae → Holophagae bacterium	589	Open in IMG/M
3300005590\|Ga0070727_10255095	All Organisms → cellular organisms → Bacteria	979	Open in IMG/M
3300005615\|Ga0070702_100895785	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	694	Open in IMG/M
3300005836\|Ga0074470_11214908	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300006224\|Ga0079037_100405777	All Organisms → cellular organisms → Bacteria	1291	Open in IMG/M
3300006224\|Ga0079037_100970937	All Organisms → cellular organisms → Bacteria	840	Open in IMG/M
3300006224\|Ga0079037_101139789	All Organisms → cellular organisms → Bacteria	774	Open in IMG/M
3300006224\|Ga0079037_101444009	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300006224\|Ga0079037_101600933	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300006224\|Ga0079037_102302977	All Organisms → cellular organisms → Bacteria → Acidobacteria	538	Open in IMG/M
3300006467\|Ga0099972_11710075	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → unclassified Holophagales → Holophagales bacterium	1056	Open in IMG/M
3300006577\|Ga0074050_12099344	All Organisms → cellular organisms → Bacteria	943	Open in IMG/M
3300009053\|Ga0105095_10421555	Not Available	737	Open in IMG/M
3300009075\|Ga0105090_10285483	All Organisms → cellular organisms → Bacteria	1012	Open in IMG/M
3300009075\|Ga0105090_10612812	All Organisms → cellular organisms → Bacteria	661	Open in IMG/M
3300009078\|Ga0105106_10545059	All Organisms → cellular organisms → Bacteria	833	Open in IMG/M
3300009078\|Ga0105106_10882657	All Organisms → cellular organisms → Bacteria	636	Open in IMG/M
3300009091\|Ga0102851_10074103	All Organisms → cellular organisms → Bacteria	2848	Open in IMG/M
3300009091\|Ga0102851_11763455	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300009091\|Ga0102851_11968227	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	661	Open in IMG/M
3300009091\|Ga0102851_12389117	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → unclassified Holophagae → Holophagae bacterium	604	Open in IMG/M
3300009091\|Ga0102851_12542184	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300009091\|Ga0102851_12590216	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300009091\|Ga0102851_12885690	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300009091\|Ga0102851_12922851	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → unclassified Holophagae → Holophagae bacterium	549	Open in IMG/M
3300009091\|Ga0102851_13485584	All Organisms → cellular organisms → Bacteria → Acidobacteria	505	Open in IMG/M
3300009111\|Ga0115026_10541848	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → unclassified Holophagae → Holophagae bacterium	873	Open in IMG/M
3300009111\|Ga0115026_10577284	All Organisms → cellular organisms → Bacteria	849	Open in IMG/M
3300009111\|Ga0115026_10984468	All Organisms → cellular organisms → Bacteria	673	Open in IMG/M
3300009131\|Ga0115027_11318662	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	583	Open in IMG/M
3300009131\|Ga0115027_11726546	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	522	Open in IMG/M
3300009146\|Ga0105091_10238521	All Organisms → cellular organisms → Bacteria	875	Open in IMG/M
3300009153\|Ga0105094_10465927	All Organisms → cellular organisms → Bacteria	734	Open in IMG/M
3300009153\|Ga0105094_10750090	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → unclassified Holophagae → Holophagae bacterium	573	Open in IMG/M
3300009165\|Ga0105102_10286850	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas	849	Open in IMG/M
3300009166\|Ga0105100_10143470	All Organisms → cellular organisms → Bacteria	1414	Open in IMG/M
3300009167\|Ga0113563_11602296	All Organisms → cellular organisms → Bacteria	770	Open in IMG/M
3300009167\|Ga0113563_11888646	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae	712	Open in IMG/M
3300009167\|Ga0113563_12310820	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → unclassified Holophagae → Holophagae bacterium	647	Open in IMG/M
3300009170\|Ga0105096_10240317	All Organisms → cellular organisms → Bacteria → Acidobacteria	919	Open in IMG/M
3300009179\|Ga0115028_10629919	All Organisms → cellular organisms → Bacteria → Proteobacteria	806	Open in IMG/M
3300009504\|Ga0114946_10197042	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → unclassified Holophagae → Holophagae bacterium	1089	Open in IMG/M
3300009506\|Ga0118657_10519471	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division KSB1 → unclassified candidate division KSB1 → candidate division KSB1 bacterium RBG_16_48_16	1537	Open in IMG/M
3300009506\|Ga0118657_12234971	Not Available	625	Open in IMG/M
3300009868\|Ga0130016_10900797	Not Available	516	Open in IMG/M
3300010392\|Ga0118731_104945603	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → unclassified Holophagae → Holophagae bacterium	517	Open in IMG/M
3300010392\|Ga0118731_110031405	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	750	Open in IMG/M
3300010392\|Ga0118731_112164052	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	595	Open in IMG/M
3300010392\|Ga0118731_115486002	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300010412\|Ga0136852_10553237	All Organisms → cellular organisms → Bacteria	1112	Open in IMG/M
3300010412\|Ga0136852_11623376	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300010430\|Ga0118733_102304863	All Organisms → cellular organisms → Bacteria → Acidobacteria	1067	Open in IMG/M
3300010430\|Ga0118733_107629485	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → unclassified Holophagae → Holophagae bacterium	561	Open in IMG/M
3300011262\|Ga0151668_1055543	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → unclassified Holophagae → Holophagae bacterium	555	Open in IMG/M
3300012931\|Ga0153915_10602373	Not Available	1263	Open in IMG/M
3300012964\|Ga0153916_10774928	All Organisms → cellular organisms → Bacteria → Acidobacteria	1039	Open in IMG/M
3300014315\|Ga0075350_1096195	All Organisms → cellular organisms → Bacteria	696	Open in IMG/M
3300014324\|Ga0075352_1124295	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	701	Open in IMG/M
3300015372\|Ga0132256_103599960	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300024056\|Ga0124853_1208086	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → unclassified Holophagae → Holophagae bacterium	2392	Open in IMG/M
3300024056\|Ga0124853_1517238	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → unclassified Holophagae → Holophagae bacterium	2289	Open in IMG/M
3300024233\|Ga0224521_1021343	All Organisms → cellular organisms → Bacteria → Acidobacteria	1496	Open in IMG/M
3300024240\|Ga0224522_1031159	All Organisms → cellular organisms → Bacteria → Acidobacteria	1357	Open in IMG/M
(restricted) 3300024528\|Ga0255045_10398283	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → unclassified Holophagae → Holophagae bacterium	564	Open in IMG/M
3300025557\|Ga0210141_1029365	All Organisms → cellular organisms → Bacteria	1054	Open in IMG/M
3300025799\|Ga0210122_1089304	All Organisms → cellular organisms → Bacteria	684	Open in IMG/M
3300026026\|Ga0210129_1130870	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300027743\|Ga0209593_10034519	All Organisms → cellular organisms → Bacteria	1990	Open in IMG/M
3300027828\|Ga0209692_10508609	All Organisms → cellular organisms → Bacteria → Acidobacteria	501	Open in IMG/M
3300027871\|Ga0209397_10176875	All Organisms → cellular organisms → Bacteria	967	Open in IMG/M
(restricted) 3300027881\|Ga0255055_10761539	Not Available	515	Open in IMG/M
3300027885\|Ga0209450_10257874	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → unclassified Holophagae → Holophagae bacterium	1250	Open in IMG/M
3300027900\|Ga0209253_10301858	All Organisms → cellular organisms → Bacteria → Acidobacteria	1243	Open in IMG/M
3300027900\|Ga0209253_10330638	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → unclassified Holophagae → Holophagae bacterium	1175	Open in IMG/M
3300027917\|Ga0209536_101186181	Not Available	937	Open in IMG/M
3300027917\|Ga0209536_102457320	All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Candidatus Sulfomarinibacteraceae → Candidatus Sulfomarinibacter → Candidatus Sulfomarinibacter kjeldsenii	615	Open in IMG/M
3300027975\|Ga0209391_10075886	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → unclassified Holophagae → Holophagae bacterium	1531	Open in IMG/M
(restricted) 3300028045\|Ga0233414_10463593	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300030613\|Ga0299915_10544048	All Organisms → cellular organisms → Bacteria	755	Open in IMG/M
3300030613\|Ga0299915_10844180	Not Available	567	Open in IMG/M
3300031665\|Ga0316575_10216959	All Organisms → cellular organisms → Bacteria	798	Open in IMG/M
3300031727\|Ga0316576_10000911	All Organisms → cellular organisms → Bacteria	15070	Open in IMG/M
3300031728\|Ga0316578_10267098	All Organisms → cellular organisms → Bacteria	1025	Open in IMG/M
3300031733\|Ga0316577_10805342	All Organisms → cellular organisms → Bacteria → Acidobacteria	533	Open in IMG/M
3300031834\|Ga0315290_10210446	Not Available	1692	Open in IMG/M
3300031834\|Ga0315290_10626774	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	932	Open in IMG/M
3300031834\|Ga0315290_11447090	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300032173\|Ga0315268_12489415	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300032251\|Ga0316198_10021994	All Organisms → cellular organisms → Bacteria	3922	Open in IMG/M
3300032251\|Ga0316198_10203011	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1146	Open in IMG/M
3300032256\|Ga0315271_10659790	All Organisms → cellular organisms → Bacteria	897	Open in IMG/M
3300032258\|Ga0316191_10199345	All Organisms → cellular organisms → Bacteria	1460	Open in IMG/M
3300032259\|Ga0316190_10659422	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Woeseiaceae → Woeseia → unclassified Woeseia → Woeseia sp.	696	Open in IMG/M
3300032260\|Ga0316192_10910941	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Woeseiaceae → Woeseia → unclassified Woeseia → Woeseia sp.	589	Open in IMG/M
3300032262\|Ga0316194_10428465	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → unclassified Holophagae → Holophagae bacterium	836	Open in IMG/M
3300032263\|Ga0316195_10443680	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300032263\|Ga0316195_10803194	Not Available	506	Open in IMG/M
3300032273\|Ga0316197_10621386	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → unclassified Holophagae → Holophagae bacterium	560	Open in IMG/M
3300032401\|Ga0315275_12441501	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → unclassified Holophagae → Holophagae bacterium	542	Open in IMG/M
3300033406\|Ga0316604_10592291	All Organisms → cellular organisms → Bacteria → Acidobacteria	610	Open in IMG/M
3300033406\|Ga0316604_10789667	Not Available	521	Open in IMG/M
3300033408\|Ga0316605_11029279	All Organisms → cellular organisms → Bacteria	791	Open in IMG/M
3300033408\|Ga0316605_11557103	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → unclassified Holophagae → Holophagae bacterium	642	Open in IMG/M
3300033408\|Ga0316605_11673266	Not Available	619	Open in IMG/M
3300033408\|Ga0316605_11826885	All Organisms → cellular organisms → Bacteria → Acidobacteria	591	Open in IMG/M
3300033408\|Ga0316605_11864650	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → unclassified Holophagae → Holophagae bacterium	585	Open in IMG/M
3300033408\|Ga0316605_11973843	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300033413\|Ga0316603_10132254	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → unclassified Holophagae → Holophagae bacterium	2034	Open in IMG/M
3300033413\|Ga0316603_10381083	All Organisms → cellular organisms → Bacteria	1270	Open in IMG/M
3300033413\|Ga0316603_10586468	All Organisms → cellular organisms → Bacteria	1033	Open in IMG/M
3300033413\|Ga0316603_10861338	All Organisms → cellular organisms → Bacteria → Acidobacteria	853	Open in IMG/M
3300033413\|Ga0316603_10877735	All Organisms → cellular organisms → Bacteria	845	Open in IMG/M
3300033413\|Ga0316603_11131774	All Organisms → cellular organisms → Bacteria	741	Open in IMG/M
3300033413\|Ga0316603_11420735	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → unclassified Holophagae → Holophagae bacterium	658	Open in IMG/M
3300033413\|Ga0316603_11765266	All Organisms → cellular organisms → Bacteria → Acidobacteria	586	Open in IMG/M
3300033414\|Ga0316619_10755414	All Organisms → cellular organisms → Bacteria	826	Open in IMG/M
3300033416\|Ga0316622_100094224	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → unclassified Holophagae → Holophagae bacterium	2981	Open in IMG/M
3300033416\|Ga0316622_100288346	All Organisms → cellular organisms → Bacteria	1799	Open in IMG/M
3300033416\|Ga0316622_100795396	All Organisms → cellular organisms → Bacteria	1098	Open in IMG/M
3300033416\|Ga0316622_101119439	All Organisms → cellular organisms → Bacteria	920	Open in IMG/M
3300033416\|Ga0316622_101306812	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → unclassified Holophagae → Holophagae bacterium	848	Open in IMG/M
3300033416\|Ga0316622_101880730	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → unclassified Holophagae → Holophagae bacterium	696	Open in IMG/M
3300033416\|Ga0316622_102213504	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	637	Open in IMG/M
3300033416\|Ga0316622_102691516	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → unclassified Holophagae → Holophagae bacterium	571	Open in IMG/M
3300033416\|Ga0316622_102878526	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → unclassified Holophagae → Holophagae bacterium	550	Open in IMG/M
3300033418\|Ga0316625_101112644	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M
3300033418\|Ga0316625_101361135	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300033418\|Ga0316625_102587278	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → unclassified Holophagae → Holophagae bacterium	515	Open in IMG/M
3300033419\|Ga0316601_100341802	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → unclassified Holophagae → Holophagae bacterium	1387	Open in IMG/M
3300033419\|Ga0316601_101471375	All Organisms → cellular organisms → Bacteria → Proteobacteria	686	Open in IMG/M
3300033429\|Ga0316193_10355220	All Organisms → cellular organisms → Bacteria	1164	Open in IMG/M
3300033429\|Ga0316193_10521958	All Organisms → cellular organisms → Bacteria	946	Open in IMG/M
3300033429\|Ga0316193_10797580	All Organisms → cellular organisms → Bacteria	752	Open in IMG/M
3300033434\|Ga0316613_10262279	All Organisms → cellular organisms → Bacteria	1133	Open in IMG/M
3300033480\|Ga0316620_11363320	All Organisms → cellular organisms → Bacteria	698	Open in IMG/M
3300033481\|Ga0316600_10495247	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales	848	Open in IMG/M
3300033483\|Ga0316629_11304388	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalogenimonas → Dehalogenimonas alkenigignens	584	Open in IMG/M
3300033483\|Ga0316629_11840744	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → unclassified Holophagae → Holophagae bacterium	501	Open in IMG/M
3300033485\|Ga0316626_10224674	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → unclassified Holophagae → Holophagae bacterium	1490	Open in IMG/M
3300033485\|Ga0316626_10636890	All Organisms → cellular organisms → Bacteria	923	Open in IMG/M
3300033485\|Ga0316626_10638336	Not Available	922	Open in IMG/M
3300033485\|Ga0316626_10711589	All Organisms → cellular organisms → Bacteria	875	Open in IMG/M
3300033485\|Ga0316626_11316001	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	648	Open in IMG/M
3300033485\|Ga0316626_11742239	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → unclassified Holophagae → Holophagae bacterium	563	Open in IMG/M
3300033485\|Ga0316626_11978394	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	528	Open in IMG/M
3300033488\|Ga0316621_10292920	All Organisms → cellular organisms → Bacteria → Proteobacteria	1066	Open in IMG/M
3300033488\|Ga0316621_10626394	All Organisms → cellular organisms → Bacteria	769	Open in IMG/M
3300033488\|Ga0316621_11090762	All Organisms → cellular organisms → Bacteria → Acidobacteria	599	Open in IMG/M
3300033493\|Ga0316631_10075890	All Organisms → cellular organisms → Bacteria → Proteobacteria	1144	Open in IMG/M
3300033513\|Ga0316628_100930770	All Organisms → cellular organisms → Bacteria	1151	Open in IMG/M
3300033513\|Ga0316628_102319118	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	710	Open in IMG/M
3300033513\|Ga0316628_103708496	Not Available	549	Open in IMG/M
3300033521\|Ga0316616_100245438	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → unclassified Holophagae → Holophagae bacterium	1839	Open in IMG/M
3300033521\|Ga0316616_103227634	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → unclassified Holophagae → Holophagae bacterium	614	Open in IMG/M
3300033521\|Ga0316616_104406139	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → unclassified Holophagae → Holophagae bacterium	530	Open in IMG/M
3300033521\|Ga0316616_104752849	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300033557\|Ga0316617_100958341	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → unclassified Holophagae → Holophagae bacterium	833	Open in IMG/M
3300033557\|Ga0316617_101368030	All Organisms → cellular organisms → Bacteria	709	Open in IMG/M
3300033557\|Ga0316617_102068186	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300034052\|Ga0373889_088241	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300034081\|Ga0373911_085263	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	571	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.32%
Host-Associated	Host-Associated	2.92%
Engineered	Engineered	1.75%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	57.31%
Terrestrial	Environmental → Terrestrial	38.01%
Plants	Host-Associated → Plants	2.92%
Bioremediation	Engineered → Bioremediation	1.17%
Wastewater	Engineered → Wastewater	0.58%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	36.84%
Freshwater	Environmental → Aquatic → Freshwater	30.99%
Marine	Environmental → Aquatic → Marine	24.56%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.92%
Sediment	Environmental → Aquatic → Sediment	1.75%
Peat	Environmental → Terrestrial → Peat	1.17%
Metal	Engineered → Bioremediation → Metal	1.17%
Activated Sludge	Engineered → Wastewater → Activated Sludge	0.58%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Terrestrial → Soil → Wetlands	34.50%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	12.87%
Coastal	Environmental → Aquatic → Marine → Coastal	12.87%
Sediment	Environmental → Aquatic → Freshwater → Sediment	12.28%
Wetlands	Environmental → Aquatic → Marine → Wetlands	7.60%
Lake	Environmental → Aquatic → Freshwater → Lake	3.51%
Oceanic	Environmental → Aquatic → Marine → Oceanic	2.34%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.34%
Lentic	Environmental → Aquatic → Freshwater → Lentic	1.75%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.75%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	1.75%
Inlet	Environmental → Aquatic → Marine → Inlet	1.17%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.17%
Unclassified	Engineered → Bioremediation → Metal → Unclassified	1.17%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.58%
Strait	Environmental → Aquatic → Marine → Strait	0.58%
Loam	Environmental → Terrestrial → Soil → Loam	0.58%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.58%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	0.58%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	34.50%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	12.87%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	12.28%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment	12.28%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	5.85%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	3.51%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	2.34%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.34%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	1.75%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	1.75%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.75%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	1.75%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	1.17%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.17%
Unclassified	Engineered → Bioremediation → Metal → Unclassified → Unclassified	1.17%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.58%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	0.58%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	0.58%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.58%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.58%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	0.58%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	33.33%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	11.70%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	7.60%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment → Sediment	5.26%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	5.85%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	4.09%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	3.51%
Marine Sediment	Environmental → Aquatic → Marine → Coastal → Sediment → Marine Sediment	2.34%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	2.34%
Marine	Environmental → Aquatic → Marine → Coastal → Sediment → Marine	2.92%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	1.75%
Worm Burrow	Environmental → Aquatic → Marine → Coastal → Sediment → Worm Burrow	1.75%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	1.17%
Marine Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment	1.17%
Mangrove Soil	Environmental → Aquatic → Marine → Oceanic → Sediment → Mangrove Soil	1.17%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	1.17%
Mangrove Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment → Mangrove Sediment	1.17%
Mangrove Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Mangrove Sediment	1.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.17%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.17%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.17%
Sediment Slurry	Engineered → Bioremediation → Metal → Unclassified → Unclassified → Sediment Slurry	1.17%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	0.58%
Wetland	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Wetland	0.58%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	0.58%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	0.58%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	0.58%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.58%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.58%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.58%
Wastewater	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Wastewater	0.58%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300001547	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site C1 Bulk	Environmental	Open in IMG/M
3300002822	Illumina_Fosmid_Bertioga	Environmental	Open in IMG/M
3300003988	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Muzzi_CordB_D2	Environmental	Open in IMG/M
3300004023	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Bullhead_CordA_D2	Environmental	Open in IMG/M
3300004030	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Galinas_CordA_D2	Environmental	Open in IMG/M
3300004051	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_CattailNLB_D2	Environmental	Open in IMG/M
3300004061	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqC_D2	Environmental	Open in IMG/M
3300004065	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Muzzi_PWC_D2	Environmental	Open in IMG/M
3300005219	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_CattailB_D2	Environmental	Open in IMG/M
3300005590	Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdAd47.2	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300006224	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaG	Environmental	Open in IMG/M
3300006467	Coastal sediment microbial communities from Rhode Island, USA: Combined Assembly of Gp0121717, Gp0123912, Gp0123935	Environmental	Open in IMG/M
3300006577	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009053	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009075	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm March2015	Environmental	Open in IMG/M
3300009078	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009091	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300009111	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1	Environmental	Open in IMG/M
3300009131	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1	Environmental	Open in IMG/M
3300009146	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009153	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009165	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015	Environmental	Open in IMG/M
3300009166	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015	Environmental	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009170	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm May2015	Environmental	Open in IMG/M
3300009179	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1	Environmental	Open in IMG/M
3300009504	Lake sediment microbial communities from Walker lake, Nevada to study Microbial Dark Matter (Phase II) - Walker Lake 11/02/13 Deep Sediment	Environmental	Open in IMG/M
3300009506	Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_8	Environmental	Open in IMG/M
3300009868	Activated sludge microbial diversity in wastewater treatment plant from Tai Wan - Bali plant Bali plant	Engineered	Open in IMG/M
3300010392	Coastal sediment microbial communities from Rhode Island, USA. Combined Assembly of Gp0121717, Gp0123912, Gp0123935, Gp0139423, Gp0139424, Gp0139388, Gp0139387, Gp0139386, Gp0139385	Environmental	Open in IMG/M
3300010412	Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_10	Environmental	Open in IMG/M
3300010430	Marine sediment microbial communities from Gulf of Thailand under amendment with organic carbon and nitrate - JGI co-assembly of 8 samples	Environmental	Open in IMG/M
3300011262	Marine sediment microbial communities from Japan Sea near Toyama Prefecture, Japan - 2015_5, total	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012964	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG	Environmental	Open in IMG/M
3300014315	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_TuleC_D1	Environmental	Open in IMG/M
3300014324	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D1	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300024056	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300024233	Peat soil microbial communities from Stordalen Mire, Sweden - C.F.S.T0	Environmental	Open in IMG/M
3300024240	Peat soil microbial communities from Stordalen Mire, Sweden - C.F.S.T25	Environmental	Open in IMG/M
3300024528 (restricted)	Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_23	Environmental	Open in IMG/M
3300025557	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Galinas_CordB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025799	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Muzzi_CordB_D2 (SPAdes)	Environmental	Open in IMG/M
3300026026	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_CattailB_D2 (SPAdes)	Environmental	Open in IMG/M
3300027743	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027828	Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdDd47.2 (SPAdes)	Environmental	Open in IMG/M
3300027871	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027881 (restricted)	Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_27	Environmental	Open in IMG/M
3300027885	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - LWP11 LW (SPAdes)	Environmental	Open in IMG/M
3300027900	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes)	Environmental	Open in IMG/M
3300027917	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-8_12 (SPAdes)	Environmental	Open in IMG/M
3300027975	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300028045 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_10_MG	Environmental	Open in IMG/M
3300030613	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT92D227	Environmental	Open in IMG/M
3300031665	Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3	Host-Associated	Open in IMG/M
3300031727	Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5	Host-Associated	Open in IMG/M
3300031728	Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC	Host-Associated	Open in IMG/M
3300031733	Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1	Host-Associated	Open in IMG/M
3300031834	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0	Environmental	Open in IMG/M
3300032173	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_top	Environmental	Open in IMG/M
3300032251	Coastal sediment microbial communities from Oude Bieten Haven, Netherlands - site A anoxic	Environmental	Open in IMG/M
3300032256	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_top	Environmental	Open in IMG/M
3300032258	Coastal sediment microbial communities from Maine, United States - Eddy worm burrow 2 cm	Environmental	Open in IMG/M
3300032259	Coastal sediment microbial communities from Maine, United States - Eddy worm burrow 2	Environmental	Open in IMG/M
3300032260	Coastal sediment microbial communities from Maine, United States - Merrow Island worm burrow	Environmental	Open in IMG/M
3300032262	Coastal sediment microbial communities from Maine, United States - Cross River sediment 1	Environmental	Open in IMG/M
3300032263	Coastal sediment microbial communities from Maine, United States - Phippsburg sediment 1	Environmental	Open in IMG/M
3300032273	Coastal sediment microbial communities from Oude Bieten Haven, Netherlands - site A oxic	Environmental	Open in IMG/M
3300032401	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G03_0	Environmental	Open in IMG/M
3300033406	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_CT	Environmental	Open in IMG/M
3300033408	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_noCT	Environmental	Open in IMG/M
3300033413	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_noCT	Environmental	Open in IMG/M
3300033414	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D4_B	Environmental	Open in IMG/M
3300033416	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D5_C	Environmental	Open in IMG/M
3300033418	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D1_A	Environmental	Open in IMG/M
3300033419	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_noCT	Environmental	Open in IMG/M
3300033429	Coastal sediment microbial communities from Maine, United States - Merrow Island sediment 2	Environmental	Open in IMG/M
3300033434	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_CT_b	Environmental	Open in IMG/M
3300033480	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_B	Environmental	Open in IMG/M
3300033481	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_CT	Environmental	Open in IMG/M
3300033483	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D1_A	Environmental	Open in IMG/M
3300033485	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D5_A	Environmental	Open in IMG/M
3300033488	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D1_C	Environmental	Open in IMG/M
3300033493	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D3_A	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300033521	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_B	Environmental	Open in IMG/M
3300033557	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_B	Environmental	Open in IMG/M
3300034052	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - A1A4.2	Engineered	Open in IMG/M
3300034081	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - B4A4.3	Engineered	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F035820

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ13530_1016459742	3300001213	Wetland	MTNLRAVRDPASDTGWKIEIGRFPGWAVVPDWQP*
JGI20215J15232_10494812	3300001547	Wetland	LADADLTKRPLHTLPYEPLLAKLKSLTSLRAVCDPSSDTGLKIEIGPFPGRMEASGW*
BMAI_10295471	3300002822	Mangrove Soil	LHGLSYDELITKLRTLSNVRAIRDRESSTSWMIEVGPFPGWAEVPTW*
BMAI_11392593	3300002822	Mangrove Soil	DELIAKLHSLTNLRAVRDEESSTGWKIEVGPFPGWAEVPTW*
Ga0055475_102328982	3300003988	Natural And Restored Wetlands	KPPLHTLPHDELIAKLRSLTNLRAVRDADDPTGWTIELGPFPGWSDTPTW*
Ga0055441_100881322	3300004023	Natural And Restored Wetlands	LLAKLKSLTNLRAVPDETSTTGWKIEIGSLPSWEKVPTW*
Ga0055444_102145072	3300004030	Natural And Restored Wetlands	PDLSKPPLHTLPYDELMAKLRSFTNLEVVEDEASSTGYRLEVGPFPGWMDVPTW*
Ga0055492_101439792	3300004051	Natural And Restored Wetlands	PHDELIAKLKTLTNLRAVRDEDSSTGWKIEVGPFPGWAEVPTW*
Ga0055487_101066731	3300004061	Natural And Restored Wetlands	ALPHDELLAKLHSLTNLRAVRDASSPNGWKIDLGPFPGWTEVPEW*
Ga0055481_103531592	3300004065	Natural And Restored Wetlands	RDELLAKLQSLTNFRAVRDPEAPNGWSIELDTFPGWKDVATW*
Ga0069004_102056431	3300005219	Natural And Restored Wetlands	LTKRPLHTLPYEPLLAKLKSLTSLRAVCDPSSDTGLKIEIGPFPGRMEASGW*
Ga0070727_102550951	3300005590	Marine Sediment	AKLKSLTNLRAVPDETSSTGWKIEIGPFPGWEEVPEW*
Ga0070702_1008957852	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	EELLAKLRALTNLRAVPDPSSATGYKIEAGPFPGWATVPRW*
Ga0074470_112149081	3300005836	Sediment (Intertidal)	FQTLPRKELLAKLRALTNLRAVPDPSSATGYKIEAGPFSGWASVPGW*
Ga0079037_1004057771	3300006224	Freshwater Wetlands	TLPHDELLAKLKSLTNLRAVRDPASDTGYSIELDPFPGWAVVPEWNP*
Ga0079037_1009709372	3300006224	Freshwater Wetlands	ELLAKLKSLTNLRAVRDPASETGWKIEVGPFPGWKDVPTWQP*
Ga0079037_1011397891	3300006224	Freshwater Wetlands	PPLHTLRHDELLAKLDSLTNLRAVRDDSSSTGWTITSGPFPGWATVPEWNP*
Ga0079037_1014440091	3300006224	Freshwater Wetlands	LAKLKSLTNLRAVKDAASPTGWKIEVGPFPGWRDVPTW*
Ga0079037_1016009331	3300006224	Freshwater Wetlands	HTLRHDELLAKLDSLTNLRAVRDDSSSTGWTITFGPFPGWANVPTW*
Ga0079037_1023029771	3300006224	Freshwater Wetlands	PLHALPLDQLLAKLRSLTNFRAVRDPASSTGWKIEIGPFPGWRDVPSW*
Ga0099972_117100751	3300006467	Marine	ELIAKLQSLTNLRAVRDPESSTGWSIDIGPFPGWKEVPEW*
Ga0074050_120993442	3300006577	Soil	PDPSEPPFQTLPREELLAKLRALTNLRAVPDPASATGYKIEAGTFPGWGSVPEW*
Ga0105095_104215551	3300009053	Freshwater Sediment	LTNLRAVRDPASDSGWKVEIGPFPGWATVSEWNP*
Ga0105090_102854834	3300009075	Freshwater Sediment	LRSFTNLRAVRDPKAANGWAIELGPFPGWRDVPNW*
Ga0105090_106128121	3300009075	Freshwater Sediment	PHDELLAKLRSLTNLRAVRDPESSTGWKIEVGPFPGWATVPEW*
Ga0105106_105450591	3300009078	Freshwater Sediment	MPDLSHPPLHTLPHDELLAKLESLTNLRAVRDEKAPSGWTVEVGHVPTW*
Ga0105106_108826571	3300009078	Freshwater Sediment	LHSLTNLRAVRDPASDTGWTIELGPFPGWRDAPTW*
Ga0102851_100741036	3300009091	Freshwater Wetlands	LARLKSLTNLRAVRDPGSDTGWKIEVGPFPGWAEVPTWNP*
Ga0102851_117634551	3300009091	Freshwater Wetlands	LPHDALLAKLKSLTNLRAVRDPASETGWKIEVGPFPGWKDVPTWQP*
Ga0102851_119682272	3300009091	Freshwater Wetlands	AKLRSLTNLRAVRDPASSTGWKIEVGPFPGWKNVPTW*
Ga0102851_123891171	3300009091	Freshwater Wetlands	KPPLHTLPHDELIAKLETLTNLRAVRDSNSSTGWTIELGPFPGWAVVPEWNP*
Ga0102851_125421841	3300009091	Freshwater Wetlands	HDELLAKLDSLTNLRAVRDDSSSTGWTITSGPFPGWATVPEWNP*
Ga0102851_125902161	3300009091	Freshwater Wetlands	PPLHTLPHDELLAKLHTLTNLRAVRNASSDTGWTIELGPFPGWANVPTW*
Ga0102851_128856901	3300009091	Freshwater Wetlands	LVAKLRSLTNLRAVRDPAAPTGWKIDVGPFPGWKDVPTW*
Ga0102851_129228512	3300009091	Freshwater Wetlands	LHTLPHDELLAKLKSLTNLRAVPDPSSDTGWKVEVGPFPGWAEVPTWNP*
Ga0102851_134855842	3300009091	Freshwater Wetlands	TLRSLTNLRAAKDPTSSTGWSIEVGPFAGWKDVPEW*
Ga0115026_105418483	3300009111	Wetland	LDKPPLHTLPHDELLAKLRSLTNLRAVRDPASDTGWTIELGPFPGWRDVPTW*
Ga0115026_105772843	3300009111	Wetland	LHTLPHDELLAKLHSLTNLRAVRNPSSSTGWTIELGPFPGWRDVPDWNP*
Ga0115026_109844681	3300009111	Wetland	PHGELLAKLHSLTNLRAVRDPASFTGWTIELGPFPGWREIPTW*
Ga0115027_113186621	3300009131	Wetland	HDQLLAKLKSLTNLHAVRDSSSDTGWKIEIGPFRGWAIVPEWQP*
Ga0115027_117265461	3300009131	Wetland	MQRTGAALRHDALLATLRALTNLRAVRDKGSDTGWKIEVGPFPGWAKVPMWNP*
Ga0105091_102385213	3300009146	Freshwater Sediment	VAKLKSLTNFRATRDPSSPDGWKIEIGPFPGWAVVPDW*
Ga0105094_104659271	3300009153	Freshwater Sediment	PDLSKPPLNTLPHDELLAKLKSLTNLRAVRDPSSDTGWKVEVGPFPGWRDVPTW*
Ga0105094_107500901	3300009153	Freshwater Sediment	VSLPALTNLRSVRDPASDTGWKVEIGPFPGWRDVPTW*
Ga0105102_102868501	3300009165	Freshwater Sediment	ELIAKLQSLTNLRAVRDPESATGWKIEVGPFPGWKNVPAW*
Ga0105100_101434701	3300009166	Freshwater Sediment	MPDLSHPPLHTLPHDELLAKLESLTNLRAVRDEKAPSGWTVEVGHVPNW*
Ga0113563_116022961	3300009167	Freshwater Wetlands	TLPLDQLLAKLRPLTNLRAVRDPASDTGWKVEIGPFPGWALVPTWQP*
Ga0113563_118886461	3300009167	Freshwater Wetlands	PHDELLTRLRSLTNLRAVRDPKSSTGWTVELGPFPGWKNIPAW*
Ga0113563_123108202	3300009167	Freshwater Wetlands	HTLPHDELLAKLGLLTNLRAVPDETSDTGWTIEIGPFPGWAEVPEWNP*
Ga0105096_102403171	3300009170	Freshwater Sediment	LIAKLRSLTNLRAVRDPDSDTGWKIEIGPFPGWAVVPTWQP*
Ga0115028_106299193	3300009179	Wetland	LAKLGSLTNLRAVRDPSSDTGWKIELGPFPGWRDVPTW*
Ga0114946_101970422	3300009504	Sediment	RDELVAKLKSLTNLRAVRDPEAEGGWRIDLAPFPGWRDVPTW*
Ga0118657_105194712	3300009506	Mangrove Sediment	KLHSLTNLRAVRDEESGTGWKIEVGPFPGWAEVPTW*
Ga0118657_122349713	3300009506	Mangrove Sediment	KQTLHALPHDKLVAKLKSLTNLQAVRDPESSTGWSIEVGSFPGWKDVPQW*
Ga0130016_109007971	3300009868	Wastewater	DRPPLHSLPHGELIAKLGSLTNLRAVRDPSADTGWTIDVGPFPGWRDVPTW*
Ga0118731_1049456032	3300010392	Marine	LAKLRSLTNLRAVRDESSTTGWSIEIGPFPGWEQVPAW*
Ga0118731_1100314051	3300010392	Marine	PPFHSLPYEELLAKLHSFTNVRAIEDPTSSTGWQLEVGPFPGWADFPTW*
Ga0118731_1121640522	3300010392	Marine	LPELLAKLESLTNLRAVRDVDSSTGWSIEIGPFPGWKEVPTW*
Ga0118731_1154860021	3300010392	Marine	PFNLLPYDELLGRLRSLTNLRAVRDPDSSTGWTLELAPFPGWEEVSMW*
Ga0136852_105532371	3300010412	Mangrove Sediment	HTLTNLRAVCDDNSSTGWKIEVGPFPGWATLPTW*
Ga0136852_116233762	3300010412	Mangrove Sediment	KLIAKLKTLTNLRAVRDEESSTGWSIEVGPFPGWAEVPTW*
Ga0118733_1023048631	3300010430	Marine Sediment	LHTLPRDELLTKLRSLTNLQVVKSPTSSTGWSLEIGPFPGWDEVPTW*
Ga0118733_1076294852	3300010430	Marine Sediment	LTRLHSMTNVQAVENPDSSTGWKLEVGPFPGWREVPEW*
Ga0151668_10555432	3300011262	Marine	SGCGRCPSLDKPPLHTLPLEELLAKLRSLTNLRAVRDPESSTGWSIEIGPFPGWQEVPTW
Ga0153915_106023731	3300012931	Freshwater Wetlands	LHTLPHDQLVTKLKSLTNLRAVRDPSSDTGWKLEIGPFPGWTVVPDWQP*
Ga0153916_107749283	3300012964	Freshwater Wetlands	LAKLKALTNLRAVRDAASSTGWKIELGPFPGWRNIPAW*
Ga0075350_10961951	3300014315	Natural And Restored Wetlands	KLKSLTNLRAVRDPESSTGWKIEVGPFPGWSEVPEW*
Ga0075352_11242951	3300014324	Natural And Restored Wetlands	AKLRALTNLRAVPDPSSATGYKIEAGPFPGWASVPEW*
Ga0132256_1035999601	3300015372	Arabidopsis Rhizosphere	DPSQPPFQTLPREELLAKLRALTNLRAVPDPASATGYKIEAGTFPGWGSVPEW*
Ga0124853_12080863	3300024056	Freshwater Wetlands	MPDLSKPPLHTLPHDELLARLHPLTNLRAVRDDSLSTGWTIDLGPFPGWRDVPTW
Ga0124853_15172381	3300024056	Freshwater Wetlands	VLATLRALTNLRAARDPGSDTGWKIDVGPFPGWAKVPTW
Ga0224521_10213431	3300024233	Soil	PHDELVATLRALTNLRAVRDPASDSGWKVEIGPFPGWAKVPEWQP
Ga0224522_10311592	3300024240	Soil	VVTLRALTNLRAVRDPASDSGWKVEIGPFPGWAKVPEWQP
(restricted) Ga0255045_103982831	3300024528	Seawater	LLATLKSLTNVRIVEDPESSTGWKLDYAPFPGWVEVPEW
Ga0210141_10293651	3300025557	Natural And Restored Wetlands	NDPTTNLRAVRDEESSTGWTIEIGPFPGWAEVPEW
Ga0210122_10893042	3300025799	Natural And Restored Wetlands	MPDVTQPPLHTLPLDELLAKLRELTNVQVVRDEASPTGYKVEIGPFPGWQDTPTWFAPAAEASTE
Ga0210129_11308702	3300026026	Natural And Restored Wetlands	LTKRPLHTLPYEPLLAKLKSLTSLRAVCDPSSDTGLKIEIGPFPGRMEASGW
Ga0209593_100345195	3300027743	Freshwater Sediment	VAKLKSLTNFRATRDPSSPDGWKIEIGPFPGWAVVPDW
Ga0209692_105086092	3300027828	Marine Sediment	LPHDELIAKLKSLTNLRAARDPESSTGWSVEIGPFPGWKEVPTW
Ga0209397_101768752	3300027871	Wetland	KLKSLTNLRAVPDPESDTGWKVEIGPFPGWREVPAW
(restricted) Ga0255055_107615391	3300027881	Seawater	DKPPLHTLSYDELMAKLRSLTNLRAVPEKDNATGYKVEPGPFPGWREVPTW
Ga0209450_102578744	3300027885	Freshwater Lake Sediment	PMPDLSKPPLHTLPLDELLAKLRSLTNLRAVRDPSSDSGWKIELGPFPGWRDVPTW
Ga0209253_103018581	3300027900	Freshwater Lake Sediment	PHDELLAKLKSLTNLRAVRDPSSDTGWKVEIGPFPGWAAVPTW
Ga0209253_103306382	3300027900	Freshwater Lake Sediment	MPDLSKPPLHALSHGELLAKLKTLTNLRAVRDPSSDTGWKVEIGPFPGWREVPTW
Ga0209536_1011861812	3300027917	Marine Sediment	MPEILETRMAKLHSLTNLRAVPDTTSATGYRLEAEEFPGWDPVPTW
Ga0209536_1024573202	3300027917	Marine Sediment	PFHTLPHNELIAKLDDLTNLRAVPDPESSTGWKLEVGPFPGWAEVPEW
Ga0209391_100758864	3300027975	Freshwater Sediment	DELIAKLKSLTNLRAVRDPESSTGWKIEVGPFPGWATVPEW
(restricted) Ga0233414_104635931	3300028045	Seawater	KLHSLTNIRVVRNEESSTGWKVEVGPFPGWAEVPEW
Ga0299915_105440484	3300030613	Soil	LHTLTNLRAVRAPAESIGWKIETGPFPGWRDVPTW
Ga0299915_108441803	3300030613	Soil	KLRSVTNLRAARDAGSPTGWKIEAGPFAGWEEVPGW
Ga0316575_102169592	3300031665	Rhizosphere	EELIAKLHSLTNLRAVRDPDSPTGWKIEVGPFPGWEEVPTWN
Ga0316576_100009111	3300031727	Rhizosphere	LHALPHGELVAKLRSLTNIRAVRDPESSTGWTIELEPFPGWDELPTW
Ga0316578_102670981	3300031728	Rhizosphere	ELIAKLHSLTNLRAVRDEESSTGWKIEVGPFPGWAEVPTW
Ga0316577_108053421	3300031733	Rhizosphere	LHDELIAKLESLTNLRAVRDPESSTGWTIELGPFPGWKTVPSW
Ga0315290_102104462	3300031834	Sediment	LATLRALTNMRAVRDPASGSGWKIEIGPFLGWKNVPRW
Ga0315290_106267741	3300031834	Sediment	KLVAKLRSLTNLRAARDAASDTGWKIEIGPFPGWAVVPTWEP
Ga0315290_114470902	3300031834	Sediment	REELIAKLHSLTNLRAVRDVSSPTGWKIEVGPFPGWKDVPTW
Ga0315268_124894152	3300032173	Sediment	DLGKPPLHTVPHDQLVAKLRSLTNLRTARDPASDTGWKIEIGPFPGWATVPEWQP
Ga0316198_100219948	3300032251	Sediment	ELLTKLRSLTNIRAVPDPNSFTGWKLEIGPFPGWEEVPTW
Ga0316198_102030112	3300032251	Sediment	ELLAKLKSLTNLRAVRDSDSPSGWDIEAGPFPGWKDVPTW
Ga0315271_106597902	3300032256	Sediment	LKSLTNLRAARDRASDTGWKVEIGPFPGLAKVPEWQP
Ga0316191_101993454	3300032258	Worm Burrow	LAKLRTLTNLRAVEGPDSPTGWKLVVGPFPGWEEVPTW
Ga0316190_106594222	3300032259	Worm Burrow	MRCAARLPRDEWLARLRSLTTLRAVRDTGSSTGWSIELGPGPGWTEVPDW
Ga0316192_109109411	3300032260	Worm Burrow	WLARLRLLTTLRAVRDSGSSTGWSIELGPCPGWTEVPDW
Ga0316194_104284651	3300032262	Sediment	KLKTLTNLRAVRSPDSATGWTIELAPFPGWKDVPTW
Ga0316195_104436802	3300032263	Sediment	VHTLPHDELLMKLKSLTNLRAVRVPDTATGWTIELAPFPGWKDVPSW
Ga0316195_108031942	3300032263	Sediment	ELLAKLHSLTNLRAVRDPAAADGWKIEVGPFPGWKEVPTW
Ga0316197_106213862	3300032273	Sediment	DLDQAPLQTLPYEDLITKLQSLTNLRAVRDEASSTGWSIAIGPFPGWEEVPEW
Ga0315275_124415011	3300032401	Sediment	HDELLAKLRSLTNLRAVRDPSSDTGWKVEVGPFPGWGEVPTW
Ga0316604_105922912	3300033406	Soil	DQLLAKLKSLTNLRAVRDPSSDTGWKIEIGPFPGWKDVPIW
Ga0316604_107896672	3300033406	Soil	LPHSELLAKLHSLTNLRAVRDPASDTGWTIELGPFPGWRTVPTW
Ga0316605_110292791	3300033408	Soil	ATLRALTNLRAARDPGSDTGWKIEIGPFPGWAKVPTWNP
Ga0316605_115571032	3300033408	Soil	TLPHDELLAKLHSLTNLRAVRDPSSDTGWTIELGPFPGWAEVPEWNP
Ga0316605_116732663	3300033408	Soil	LAKLDSLTNLRAVRDDSSSTGWTITFGPFPGWRDVPTW
Ga0316605_118268852	3300033408	Soil	LPYDELLAKLRSLTNLRAVRDDSSSNGWTIELGPFPGWRDVPTW
Ga0316605_118646501	3300033408	Soil	KTLTNLRAVRDHASSTGWTIELDPFPGWREVPTWR
Ga0316605_119738432	3300033408	Soil	AKLRSLTNLRAVRDPASDTGWTIEIGPFPGWRDVPTW
Ga0316603_101322542	3300033413	Soil	LHSLTNLRAVRDPSSDTGWTIELGPFPGWRDVPTW
Ga0316603_103810831	3300033413	Soil	LPHDELLAKLHSLTNLRAVREPASDTGWKIELGPFPGWRDVPTW
Ga0316603_105864684	3300033413	Soil	KLKSLTNLRAVPDPSSDTGWKIEIGPFPGWVEVPEWQP
Ga0316603_108613381	3300033413	Soil	LRSLTNLRAVRDPSSPAGWTIELGPFPGWRNVPTW
Ga0316603_108777351	3300033413	Soil	LAKLRSLTNLRAVRDPASDTGWKVEVGPFPGWAIVPEWNP
Ga0316603_111317743	3300033413	Soil	LHSLTNLRAVRDDSASTGWTIELGPFPGWRDVPTW
Ga0316603_114207352	3300033413	Soil	SKPPVHTLPHDELLAKLHSLTNLRAVRDPSSPTGWTIELGPFPGWRNVPTW
Ga0316603_117652661	3300033413	Soil	TLPHDELLAKLHSLTNLRAVRDPSSDTGWTIELGPFPGWRDVPTW
Ga0316619_107554142	3300033414	Soil	SLTNLRAVRDPASDTGYSIELDPFPGWAVVPEWNP
Ga0316622_1000942241	3300033416	Soil	HTLPHDELLAKLKSLTNLRAVRDPASPGGWKIDLDPFPGWAEVPAW
Ga0316622_1002883463	3300033416	Soil	LAKLDSLTNLRAVRDPSSDTGWTIELGPFPGWRDVPTW
Ga0316622_1007953962	3300033416	Soil	LPHDELLAKLGLLTNLRAVPDETSDTGWTIEIGPFPGWAEVPEWNP
Ga0316622_1011194391	3300033416	Soil	DELVAKLKGLTNLRAVRDPKSSTGWTVELGPFPGWKNIPAW
Ga0316622_1013068121	3300033416	Soil	KPPLHTLPREALFATLHSLTNLRAVRDASSPAGWKVEVAPFPGWRDVPTW
Ga0316622_1018807302	3300033416	Soil	KPPLHTLPHGELLAKLRSLTNLRAVRDPSSSTGWTIELGPFPGWRNVPTW
Ga0316622_1022135041	3300033416	Soil	KLKSLTNLRAVRDANSSTGWTVELGPFPGWKDIPSW
Ga0316622_1026915161	3300033416	Soil	HTLPHDELIAKLNTLTNLRAVRDPTSDTGWTIEIGPFPGWAEVPTW
Ga0316622_1028785262	3300033416	Soil	MQRTGAALPHDALLATLRALTNLRAARDPGSDTGWKIEIGPFPGWAKVPTWNP
Ga0316625_1011126441	3300033418	Soil	LGSLTNLRAVRDPSSDTGWTIELGPFPGWANVPTW
Ga0316625_1013611351	3300033418	Soil	MPDLTKPPLHALPYAELLAKLRSLTNLRAVRDPSSDAGWTIELVPFPGWRDVPTW
Ga0316625_1025872782	3300033418	Soil	KLRSLTNLRAVRDPGSDTGWKLEVGPFPGWAVVPRWH
Ga0316601_1003418023	3300033419	Soil	LRSLTNLRAVRDTSSSTGWTIELGPFPGWRDVPTW
Ga0316601_1014713753	3300033419	Soil	PPLHTLPHDELIAKLHSLTNLRAVRDPAAPTGWTIELGPFPGWRDIPTW
Ga0316193_103552203	3300033429	Sediment	PHDELITKLESLTNLRAVRDPESPTGWTIELGPFPGWKDVPTW
Ga0316193_105219581	3300033429	Sediment	KLDTHTNIRMVRDEDSSTGWTQEVGPFQGWAEVPEW
Ga0316193_107975801	3300033429	Sediment	LPRNELVAKLKSLTNLRAVRDEISSTGWSIEIGHLPRWEELPEW
Ga0316613_102622791	3300033434	Soil	LTKPPLHTLPHDELIAKLHSLTNLRAVRDDSASTGWTIELGPFPGWRDVPTW
Ga0316620_113633201	3300033480	Soil	RSLTNLRAVRDPASDTGWKIEVGPFPGWAIVPEWNP
Ga0316600_104952473	3300033481	Soil	AKLHSLTNLRAVRDPESSTGWTIELGPFPGWATVPTW
Ga0316629_113043881	3300033483	Soil	LPHDELLAKLHSLTNLRAVRDPSSPTGWTIELGPFPGWRDVPTW
Ga0316629_118407441	3300033483	Soil	PDLSKPPFHTLPHDELLAKLHSLTNLRAVRDPSSPTGWRIELGPFPGWRNVPSW
Ga0316626_102246741	3300033485	Soil	MPDLSKPPLHTLPHGELIAKLGSLTNLRAVRDPASDTGWTIELGPFPGWRDVPTW
Ga0316626_106368903	3300033485	Soil	ELLAKLHSLTNLRAVRDPAAPSGWTIELGPFPGWRDVPTW
Ga0316626_106383361	3300033485	Soil	HTLPHEELLAKLKSLTNLRAVRDPGSDTGWKIEIGPFPGWAEVPEW
Ga0316626_107115893	3300033485	Soil	KLKSLTNLRAVPDPTSDTGWNVEIGPFPGWAEVPEWNP
Ga0316626_113160012	3300033485	Soil	QLLTKLKSLTNLRAVRDPSSDTGWKIEFGPFPGWKDVPTW
Ga0316626_117422391	3300033485	Soil	LLAKLHSLTNLRAVRDPSSDTGWTIELGPFPGWAEVPEWNP
Ga0316626_119783942	3300033485	Soil	LSKPPLRTLPHGELLAKLDSLTNLRAVRDRAAPTGWTIETAPFPGWRDVPTW
Ga0316621_102929204	3300033488	Soil	KPPLHTLPYDELLAKLRSLTNLRAVRDPSSPTGWTIELGPFPGWRDVPTW
Ga0316621_106263941	3300033488	Soil	DLTKPPLHTLPHDDLLAKLHSLTNLRAVRNPSSSTGWTIELGPFPGWRDVPTW
Ga0316621_110907622	3300033488	Soil	TLHSLTNLRAVRDPESSTGWTIELGPFPGWRDVPTW
Ga0316631_100758901	3300033493	Soil	LKPLTNLRAVRDPSSDTGWKIEFGPFPGWKDVPTW
Ga0316628_1009307701	3300033513	Soil	PPLHTLPREELIAKLHSLTNLRAVRDASSPTGWKVDVGPFPGRKNVPTW
Ga0316628_1023191182	3300033513	Soil	KLTSLTNLRAVRDAKAATGWSIELGPFPGWKDVPTW
Ga0316628_1037084962	3300033513	Soil	SLTNLRAVPDPASDTGWKVEVGPFPGWATVPEWQP
Ga0316616_1002454381	3300033521	Soil	LHTLPHDELLAKLKSLTNLRAVRDPASDTGWKIEIGPFPGWATVPEWQP
Ga0316616_1032276342	3300033521	Soil	HSLTNLRAVRDPSSDTGWTIELGPFPGWAEVPEWNP
Ga0316616_1044061391	3300033521	Soil	PLHTLPYDELLAKLHSLTNLRAVRDPASDTGWTIELGPFPGWRDVPTW
Ga0316616_1047528491	3300033521	Soil	HTLPHDELLAKLKSLTNLRAVRDPASDTGWKIEVGPFPGWATVPEWQP
Ga0316617_1009583411	3300033557	Soil	TLRALTNLRAVRDPGSDTGWKIEVGPFPGWAKVPTWNP
Ga0316617_1013680302	3300033557	Soil	LPREALFATLHSLTNLRAVRDASSPTGWKIDIAPFPGWRDVPAW
Ga0316617_1020681861	3300033557	Soil	LHTLPHDELLAKLGSLTNLRAVRDPSSDTGWTIELGPFPGWAEVPAW
Ga0373889_088241_359_511	3300034052	Sediment Slurry	KPPLHTLPRETLLATLDRLTNLRVAADAATPTGYKIEIGPFPGWQDVPTW
Ga0373911_085263_29_196	3300034081	Sediment Slurry	MPDLSRPPLHVLPIDALLAKLRSLTNLRAVRDPASSAGWRIEIGPFPGWRDVPTW

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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