Metagenome / Metatranscriptome Family F035916

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F035916
Family Type	Metagenome / Metatranscriptome
Number of Sequences	171
Average Sequence Length	69 residues
Representative Sequence	MGFGVLFLLLLVTAGWWLHSRWSALRDAQAARREAEMMFIMEARLHAAGKVGPRPAAPPAPSDFYPTLPGK
Number of Associated Samples	117
Number of Associated Scaffolds	171

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	80.00 %
% of genes near scaffold ends (potentially truncated)	38.60 %
% of genes from short scaffolds (< 2000 bps)	86.55 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (55.556 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere (12.281 % of family members)
Environment Ontology (ENVO)	Unclassified (61.404 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (76.608 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 49.49% β-sheet: 0.00% Coil/Unstructured: 50.51%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 171 Family Scaffolds
PF13432	TPR_16	28.07
PF02492	cobW	5.26
PF03401	TctC	4.09
PF00106	adh_short	2.92
PF13426	PAS_9	1.75
PF01730	UreF	1.17
PF00989	PAS	0.58
PF10590	PNP_phzG_C	0.58
PF13188	PAS_8	0.58
PF13428	TPR_14	0.58
PF14559	TPR_19	0.58
PF01566	Nramp	0.58
PF02518	HATPase_c	0.58
PF01590	GAF	0.58

COG ID	Name	Functional Category	% Frequency in 171 Family Scaffolds
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	4.09
COG0830	Urease accessory protein UreF	Posttranslational modification, protein turnover, chaperones [O]	1.17
COG1914	Mn2+ or Fe2+ transporter, NRAMP family	Inorganic ion transport and metabolism [P]	0.58

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.56 %
All Organisms	root	All Organisms	44.44 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.56 %
cellular organisms	root	All Organisms → cellular organisms	44.44 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.56 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	44.44 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.56 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	42.11 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.56 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	37.43 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.56 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	22.81 %
Neisseriales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales	14.62 %
Gammaproteobacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.56 %
Neisseriales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales	14.62 %
Burkholderiales genera incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis	2.34 %
Sedimenticola	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Sedimenticola	0.58 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.56 %
Neisseriales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales	14.62 %
Aquabacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium	0.58 %
unclassified Sedimenticola	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Sedimenticola → unclassified Sedimenticola	0.58 %
Aquincola	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquincola	0.58 %
Methylibium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Methylibium	0.58 %
Rhizobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter	0.58 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.56 %
Neisseriales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales	14.62 %
unclassified Methylibium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Methylibium → unclassified Methylibium	0.58 %
unclassified Aquabacterium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → unclassified Aquabacterium	0.58 %
Sedimenticola sp. SB48	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Sedimenticola → unclassified Sedimenticola → Sedimenticola sp. SB48	0.58 %
Aquincola	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquincola	0.58 %
Rhizobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter	0.58 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.56 %
Neisseriales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales	14.62 %
Aquabacterium sp. CECT 9606	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → unclassified Aquabacterium → Aquabacterium sp. CECT 9606	0.58 %
Methylibium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Methylibium → unclassified Methylibium → Methylibium sp.	0.58 %
Sedimenticola sp. SB48	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Sedimenticola → unclassified Sedimenticola → Sedimenticola sp. SB48	0.58 %
Aquincola	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquincola	0.58 %
Rhizobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter	0.58 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.58 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004480\|Ga0062592_102440079	Not Available	525	Open in IMG/M
3300005327\|Ga0070658_10173556	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1812	Open in IMG/M
3300005327\|Ga0070658_10320957	Not Available	1322	Open in IMG/M
3300005327\|Ga0070658_10760040	Not Available	842	Open in IMG/M
3300005328\|Ga0070676_10328774	Not Available	1045	Open in IMG/M
3300005328\|Ga0070676_10659644	Not Available	760	Open in IMG/M
3300005330\|Ga0070690_100667777	Not Available	795	Open in IMG/M
3300005330\|Ga0070690_100734857	Not Available	761	Open in IMG/M
3300005331\|Ga0070670_100005832	All Organisms → cellular organisms → Bacteria → Proteobacteria	10414	Open in IMG/M
3300005331\|Ga0070670_100018008	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	6062	Open in IMG/M
3300005331\|Ga0070670_100036148	All Organisms → cellular organisms → Bacteria → Proteobacteria	4251	Open in IMG/M
3300005331\|Ga0070670_100049668	All Organisms → cellular organisms → Bacteria → Proteobacteria	3606	Open in IMG/M
3300005331\|Ga0070670_100138824	All Organisms → cellular organisms → Bacteria	2101	Open in IMG/M
3300005331\|Ga0070670_101807177	All Organisms → cellular organisms → Bacteria → Proteobacteria	563	Open in IMG/M
3300005333\|Ga0070677_10044572	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Methylibium → unclassified Methylibium → Methylibium sp.	1765	Open in IMG/M
3300005333\|Ga0070677_10772547	Not Available	547	Open in IMG/M
3300005335\|Ga0070666_10083693	All Organisms → cellular organisms → Bacteria → Proteobacteria	2183	Open in IMG/M
3300005338\|Ga0068868_100707817	All Organisms → cellular organisms → Bacteria	902	Open in IMG/M
3300005339\|Ga0070660_100491886	Not Available	1020	Open in IMG/M
3300005339\|Ga0070660_100898614	Not Available	747	Open in IMG/M
3300005344\|Ga0070661_101837036	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	515	Open in IMG/M
3300005354\|Ga0070675_101328604	Not Available	663	Open in IMG/M
3300005355\|Ga0070671_100375982	Not Available	1214	Open in IMG/M
3300005355\|Ga0070671_100486443	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1061	Open in IMG/M
3300005355\|Ga0070671_100581834	Not Available	967	Open in IMG/M
3300005355\|Ga0070671_100647749	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales	915	Open in IMG/M
3300005356\|Ga0070674_100874672	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales	781	Open in IMG/M
3300005366\|Ga0070659_100229848	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1533	Open in IMG/M
3300005455\|Ga0070663_100581396	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	940	Open in IMG/M
3300005456\|Ga0070678_100312936	All Organisms → cellular organisms → Bacteria → Proteobacteria	1338	Open in IMG/M
3300005456\|Ga0070678_102384357	Not Available	502	Open in IMG/M
3300005458\|Ga0070681_11733648	Not Available	551	Open in IMG/M
3300005526\|Ga0073909_10135304	Not Available	1013	Open in IMG/M
3300005535\|Ga0070684_101841081	Not Available	571	Open in IMG/M
3300005539\|Ga0068853_100248499	Not Available	1631	Open in IMG/M
3300005539\|Ga0068853_100914818	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales	843	Open in IMG/M
3300005544\|Ga0070686_100079018	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2174	Open in IMG/M
3300005547\|Ga0070693_100769637	Not Available	711	Open in IMG/M
3300005578\|Ga0068854_100018279	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	4703	Open in IMG/M
3300005578\|Ga0068854_102294733	Not Available	500	Open in IMG/M
3300005615\|Ga0070702_100356568	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquincola	1032	Open in IMG/M
3300005616\|Ga0068852_100745254	Not Available	991	Open in IMG/M
3300005616\|Ga0068852_101837452	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300005618\|Ga0068864_101112315	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	787	Open in IMG/M
3300005718\|Ga0068866_10387160	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	898	Open in IMG/M
3300005719\|Ga0068861_101549761	Not Available	651	Open in IMG/M
3300005840\|Ga0068870_11366010	Not Available	518	Open in IMG/M
3300005841\|Ga0068863_100132331	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2381	Open in IMG/M
3300005841\|Ga0068863_100516388	All Organisms → cellular organisms → Bacteria	1177	Open in IMG/M
3300006173\|Ga0070716_100514053	Not Available	886	Open in IMG/M
3300006237\|Ga0097621_101094116	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales	748	Open in IMG/M
3300006881\|Ga0068865_100751173	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales	838	Open in IMG/M
3300009094\|Ga0111539_12333383	Not Available	621	Open in IMG/M
3300009177\|Ga0105248_10910491	Not Available	993	Open in IMG/M
3300009177\|Ga0105248_11207425	Not Available	855	Open in IMG/M
3300009177\|Ga0105248_13131182	Not Available	526	Open in IMG/M
3300009545\|Ga0105237_12371790	Not Available	541	Open in IMG/M
3300009551\|Ga0105238_11480760	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales	707	Open in IMG/M
3300010398\|Ga0126383_12365852	Not Available	616	Open in IMG/M
3300010401\|Ga0134121_10723523	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales	947	Open in IMG/M
3300012212\|Ga0150985_102234402	Not Available	806	Open in IMG/M
3300012212\|Ga0150985_107888461	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales	882	Open in IMG/M
3300012900\|Ga0157292_10139828	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales	762	Open in IMG/M
3300012905\|Ga0157296_10108274	Not Available	771	Open in IMG/M
3300012908\|Ga0157286_10275828	Not Available	604	Open in IMG/M
3300012911\|Ga0157301_10379108	Not Available	541	Open in IMG/M
3300012977\|Ga0134087_10473101	Not Available	625	Open in IMG/M
3300012984\|Ga0164309_10528909	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	908	Open in IMG/M
3300012987\|Ga0164307_10884140	Not Available	717	Open in IMG/M
3300013296\|Ga0157374_10347238	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1474	Open in IMG/M
3300013297\|Ga0157378_11365913	Not Available	751	Open in IMG/M
3300013297\|Ga0157378_11740072	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales	671	Open in IMG/M
3300013297\|Ga0157378_12031734	Not Available	625	Open in IMG/M
3300013308\|Ga0157375_10150509	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales	2462	Open in IMG/M
3300013308\|Ga0157375_11711380	Not Available	745	Open in IMG/M
3300014166\|Ga0134079_10030686	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1798	Open in IMG/M
3300014325\|Ga0163163_10158590	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2308	Open in IMG/M
3300014326\|Ga0157380_11001334	Not Available	869	Open in IMG/M
3300014326\|Ga0157380_11045358	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales	853	Open in IMG/M
3300014745\|Ga0157377_10671165	Not Available	749	Open in IMG/M
3300014745\|Ga0157377_10754389	Not Available	712	Open in IMG/M
3300014968\|Ga0157379_11158571	Not Available	742	Open in IMG/M
3300015200\|Ga0173480_10103398	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales	1387	Open in IMG/M
3300015371\|Ga0132258_10451268	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter	3205	Open in IMG/M
3300015371\|Ga0132258_11970743	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1470	Open in IMG/M
3300015371\|Ga0132258_12206979	Not Available	1382	Open in IMG/M
3300015371\|Ga0132258_13304101	Not Available	1110	Open in IMG/M
3300015373\|Ga0132257_100615575	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales	1343	Open in IMG/M
3300015374\|Ga0132255_101741887	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	946	Open in IMG/M
3300015374\|Ga0132255_105660509	Not Available	529	Open in IMG/M
3300016371\|Ga0182034_11263547	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	643	Open in IMG/M
3300017792\|Ga0163161_10920203	Not Available	742	Open in IMG/M
3300018468\|Ga0066662_10760291	Not Available	934	Open in IMG/M
3300018468\|Ga0066662_12998064	Not Available	502	Open in IMG/M
3300018469\|Ga0190270_11136520	Not Available	816	Open in IMG/M
3300018476\|Ga0190274_10029643	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Sedimenticola → unclassified Sedimenticola → Sedimenticola sp. SB48	3717	Open in IMG/M
3300018481\|Ga0190271_10076118	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2988	Open in IMG/M
3300018920\|Ga0190273_10134531	Not Available	1449	Open in IMG/M
3300018920\|Ga0190273_10874749	Not Available	724	Open in IMG/M
3300019356\|Ga0173481_10321444	Not Available	728	Open in IMG/M
3300019361\|Ga0173482_10629082	Not Available	544	Open in IMG/M
3300019362\|Ga0173479_10265355	Not Available	763	Open in IMG/M
3300020082\|Ga0206353_10273633	Not Available	599	Open in IMG/M
3300021082\|Ga0210380_10025716	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2506	Open in IMG/M
3300021445\|Ga0182009_10053354	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1718	Open in IMG/M
3300025321\|Ga0207656_10401094	Not Available	689	Open in IMG/M
3300025321\|Ga0207656_10720371	Not Available	511	Open in IMG/M
3300025893\|Ga0207682_10239047	Not Available	844	Open in IMG/M
3300025893\|Ga0207682_10245201	Not Available	833	Open in IMG/M
3300025901\|Ga0207688_10370231	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales	885	Open in IMG/M
3300025903\|Ga0207680_10330445	Not Available	1068	Open in IMG/M
3300025903\|Ga0207680_10642211	Not Available	760	Open in IMG/M
3300025907\|Ga0207645_10141020	Not Available	1570	Open in IMG/M
3300025907\|Ga0207645_10506145	Not Available	818	Open in IMG/M
3300025908\|Ga0207643_10227050	Not Available	1144	Open in IMG/M
3300025908\|Ga0207643_10800512	Not Available	611	Open in IMG/M
3300025909\|Ga0207705_10438221	Not Available	1012	Open in IMG/M
3300025919\|Ga0207657_10289079	Not Available	1300	Open in IMG/M
3300025924\|Ga0207694_11871266	Not Available	504	Open in IMG/M
3300025925\|Ga0207650_10070338	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales	2630	Open in IMG/M
3300025925\|Ga0207650_10134255	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1940	Open in IMG/M
3300025925\|Ga0207650_10209934	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales	1563	Open in IMG/M
3300025926\|Ga0207659_10917936	Not Available	753	Open in IMG/M
3300025927\|Ga0207687_11063964	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	694	Open in IMG/M
3300025930\|Ga0207701_10348987	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1280	Open in IMG/M
3300025930\|Ga0207701_10482239	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales	1062	Open in IMG/M
3300025931\|Ga0207644_10225229	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales	1488	Open in IMG/M
3300025931\|Ga0207644_10565048	Not Available	942	Open in IMG/M
3300025932\|Ga0207690_10823687	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales	768	Open in IMG/M
3300025937\|Ga0207669_10319952	Not Available	1187	Open in IMG/M
3300025938\|Ga0207704_10365838	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1127	Open in IMG/M
3300025938\|Ga0207704_10410016	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1071	Open in IMG/M
3300025939\|Ga0207665_10333612	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales	1141	Open in IMG/M
3300025940\|Ga0207691_10531632	Not Available	997	Open in IMG/M
3300025941\|Ga0207711_11789968	Not Available	557	Open in IMG/M
3300025945\|Ga0207679_11768339	Not Available	565	Open in IMG/M
3300025960\|Ga0207651_11170376	Not Available	690	Open in IMG/M
3300025960\|Ga0207651_11552650	Not Available	596	Open in IMG/M
3300025981\|Ga0207640_10705505	Not Available	865	Open in IMG/M
3300025981\|Ga0207640_11322698	All Organisms → cellular organisms → Bacteria → Proteobacteria	644	Open in IMG/M
3300026023\|Ga0207677_10151709	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → unclassified Aquabacterium → Aquabacterium sp. CECT 9606	1789	Open in IMG/M
3300026067\|Ga0207678_10655913	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	922	Open in IMG/M
3300026067\|Ga0207678_11542987	Not Available	586	Open in IMG/M
3300026088\|Ga0207641_10070313	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3007	Open in IMG/M
3300026088\|Ga0207641_11270519	Not Available	736	Open in IMG/M
3300026088\|Ga0207641_11291914	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales	730	Open in IMG/M
3300026095\|Ga0207676_12461864	Not Available	517	Open in IMG/M
3300026121\|Ga0207683_10733748	Not Available	916	Open in IMG/M
3300026142\|Ga0207698_10364901	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1369	Open in IMG/M
3300028379\|Ga0268266_11418372	Not Available	670	Open in IMG/M
3300028587\|Ga0247828_10166141	Not Available	1121	Open in IMG/M
3300028596\|Ga0247821_10509847	Not Available	766	Open in IMG/M
3300028778\|Ga0307288_10262024	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales	680	Open in IMG/M
3300031199\|Ga0307495_10174981	Not Available	573	Open in IMG/M
3300031720\|Ga0307469_11035798	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales	768	Open in IMG/M
3300031731\|Ga0307405_10006799	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	5662	Open in IMG/M
3300031765\|Ga0318554_10044032	Not Available	2432	Open in IMG/M
3300031819\|Ga0318568_10750748	Not Available	606	Open in IMG/M
3300031854\|Ga0310904_10461256	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales	845	Open in IMG/M
3300031938\|Ga0308175_100148241	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2246	Open in IMG/M
3300031938\|Ga0308175_100616013	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1170	Open in IMG/M
3300031939\|Ga0308174_10035251	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3266	Open in IMG/M
3300031939\|Ga0308174_10060038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2601	Open in IMG/M
3300031939\|Ga0308174_10235719	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1414	Open in IMG/M
3300031939\|Ga0308174_10729974	Not Available	828	Open in IMG/M
3300031944\|Ga0310884_10793577	Not Available	579	Open in IMG/M
3300032074\|Ga0308173_11260267	Not Available	692	Open in IMG/M
3300032074\|Ga0308173_12032975	Not Available	542	Open in IMG/M
3300033551\|Ga0247830_11606409	Not Available	520	Open in IMG/M
3300034125\|Ga0370484_0020403	Not Available	1518	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	66.67%
Environmental	Environmental	33.33%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	66.67%
Terrestrial	Environmental → Terrestrial	32.75%
Aquatic	Environmental → Aquatic	0.58%

Habitat	Taxonomy	Distribution
Rhizosphere	Host-Associated → Plants → Rhizosphere	40.35%
Soil	Environmental → Terrestrial → Soil	32.75%
Rhizoplane	Host-Associated → Plants → Rhizoplane	25.15%
Roots	Host-Associated → Plants → Roots	1.17%
Freshwater	Environmental → Aquatic → Freshwater	0.58%

Habitat	Taxonomy	Distribution
Soil	Host-Associated → Plants → Rhizosphere → Soil	28.07%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	26.90%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	18.13%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.28%
Loam	Environmental → Terrestrial → Soil → Loam	5.26%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	5.26%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.75%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.17%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.58%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.58%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	28.07%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	18.13%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.04%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.28%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	7.60%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.26%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	5.26%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.34%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.34%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.75%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.17%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.58%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.58%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.58%

Habitat	Taxonomy	Distribution
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	12.28%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	8.19%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	7.60%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	7.60%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	6.43%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	5.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.68%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	4.09%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.34%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.34%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.75%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.17%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.17%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	1.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.17%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.17%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.17%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.58%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.58%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.58%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.58%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.58%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.58%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.58%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.58%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.58%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.58%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.58%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.58%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.58%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.58%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012900	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S179-409R-1	Environmental	Open in IMG/M
3300012905	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300020082	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028596	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300031199	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_S	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300034125	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_tus_01_15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062592_1024400791	3300004480	Soil	MGFGVLFLLLLVTAGWWLHSRWSALRDVQAARREAEMMFIMEARLNAAGKAGPKPAAPPPASDFYPTLPGK*
Ga0070658_101735563	3300005327	Corn Rhizosphere	MGFGVLFLLLLATAGWWLHSRWSALRDAQAARRQAEMMFIMEARLNAAGKVGPRPAAPPPPSDFYPTLPGK*
Ga0070658_103209572	3300005327	Corn Rhizosphere	MGFGVLFLLLLVTAGWWLHSRWSALREAQSARREAEMMFIMEARLHAAGKVGPKPAAPSPASDFYPTLPGK*
Ga0070658_107600403	3300005327	Corn Rhizosphere	MGFGVLFLLLLVTAGWWLHSRWSAVRDAQAARREAEMMFIMEARLNAAGKLGPRPVTPPPPSDFYPTLPGK*
Ga0070676_103287742	3300005328	Miscanthus Rhizosphere	MGFGVLFLLLLVTAGWWLHSRWSAVRDAQAARREAEMMFIMEARLDAAGKVGPRPVTPPPPSDFYPTLPGK*
Ga0070676_106596442	3300005328	Miscanthus Rhizosphere	MGFGVLFLFLLVTAGWWLHSRWSAMREAQSARREAEMMFIMEARLNAAGKVGPRPATPPPPSDFYPTLPGK*
Ga0070690_1006677771	3300005330	Switchgrass Rhizosphere	GVLFLMLLVVAGWWLHSRWSALRDAQNARREAEMMFVMEARSQVGKPAEARAAPVPASDFNPTLPGKG*
Ga0070690_1007348571	3300005330	Switchgrass Rhizosphere	MGFGVLFLLLLVTAGWWLHYRWSALRDAQAARREAEMMFIMEARLHAAGKVGPRPAAPPAPSDFYPTLPGK*
Ga0070670_1000058327	3300005331	Switchgrass Rhizosphere	MGFGVLFLLLLVTAGWWLHSRWSALRDAQAARREAEMMFIMEARLHAAGKVAAKPAAASAPSDFCPTLPGK*
Ga0070670_1000180084	3300005331	Switchgrass Rhizosphere	MGFGVLFLLLLVTAGWWLHHRWSALRDAQAARREAEMMFIMEARLNAAGKAGAKPAAPPAPSDFNPTLPGK*
Ga0070670_1000361484	3300005331	Switchgrass Rhizosphere	MGFGVLFLLLLVTAGWWLHSRWSAVRDAQAARREAEMMFIMEARLNAAGKVGPRPVTPPPPSDFYPTLPGK*
Ga0070670_1000496682	3300005331	Switchgrass Rhizosphere	MGFGVLFLLLLVTAGWWLHSRWSALRDIQTARREAEVMFLMEARINAAGKVGPTPAAPATPAAPSDFYPTLPGK*
Ga0070670_1001388242	3300005331	Switchgrass Rhizosphere	MGFGVLFLMLLVVAGWWLHSRWSALRDARDARREAEMMFVMEARSQMARPVAAPAAPAPASDFKPTLPGQR*
Ga0070670_1018071771	3300005331	Switchgrass Rhizosphere	GWWLHSRWSALRDAQDARREAEMMFVMEARSQAGKTAAAAPAAPAPASDFKPTLPGPR*
Ga0070677_100445723	3300005333	Miscanthus Rhizosphere	MGFGVLFLLLLVTAGWWLHSRWSALRDAQAARREAEMMFIMEARLHAAGKVAPRPAAPPAPSDFYPTLPGK*
Ga0070677_107725472	3300005333	Miscanthus Rhizosphere	FLLLLVTAGWWLHSRWSALRDAQAARREAEMMFIMEARLNAAGKVGPKPAAVPPPSDFYPTLPGK*
Ga0070666_100836932	3300005335	Switchgrass Rhizosphere	MGFGVLFLLLLVTAGWWLHSRWSAMRDAQTARREAEMMFIMEARLNAAGKVGPRPVTPPPPSDFYPTLPGK*
Ga0068868_1007078171	3300005338	Miscanthus Rhizosphere	MGFGVLFLMLLVVAGWWLHSRWSALRDAQDARREAEMMFVMEARSQAGKTAAAAPAAPAPASDFKPTLPGPR*
Ga0070660_1004918863	3300005339	Corn Rhizosphere	MGFGVLFLLLLVTAGWWLHSRWSAMREAQSARREAEMMFIMEARLNAAGKVGPRPATPPPPSDFYPTLPGK*
Ga0070660_1008986141	3300005339	Corn Rhizosphere	MGFGVLFLLLLVTAGWWLHSRWSALRDAQAARREAEMMFIMEARLHAAGKVGPKPAAPSPASDFYPTLPGK*
Ga0070661_1018370361	3300005344	Corn Rhizosphere	MGFGVLFLLLLVTAGWWLHSRWSALRDTQAARREAEMMFIMEARLHAAGKVGPRPAAPPAPSDFYPTLPGK*
Ga0070675_1013286042	3300005354	Miscanthus Rhizosphere	LLVTAGWWLHSRWSALRDAQAARREAEMMFIMEARLHAAGKVAPRPAAPPAPSDFYPTLPGK*
Ga0070671_1003759823	3300005355	Switchgrass Rhizosphere	MGFGVLFLMLLVVAGWWLHSRWSALRDAQDARREAEMMFVMEARSQVGKPAEARAAPVPASDFNPTLPGKG*
Ga0070671_1004864431	3300005355	Switchgrass Rhizosphere	MGFGVLFLLLLVTAGWWLHSRWSALRDAQAARREAEMMFIMEARLHAAGKVGPRPAAPPAPSDFYPTLPGK*
Ga0070671_1005818341	3300005355	Switchgrass Rhizosphere	MGFGVLFLLLLVTAGWWLHSRWSALRDAQSARREAEMMLIMEARLAAAGKVGPRPATPPPPSDFYPTLPGK*
Ga0070671_1006477491	3300005355	Switchgrass Rhizosphere	MGFGVLFLLLLVTAGWWLHSRWSALREAQSARREAEMMFIMEARLHAAGKVGPKPATPRPASDFYPTLPGK*
Ga0070674_1008746722	3300005356	Miscanthus Rhizosphere	MGFGVLFLFLLVTAGWWLHSRWSAMRDAQTARREAEMMFIMEARLNAAGKVGPRPATPPPPSDFYPTLPGK*
Ga0070659_1002298483	3300005366	Corn Rhizosphere	MGFGVLFLFLLVTAGWWLHSRWSAMREAQSARREAEMMFIMEARLNAAGKVGPRPATPPPPSDFYPTLPG
Ga0070663_1005813961	3300005455	Corn Rhizosphere	MGFGVLFLLLLATAGWWLHSRWSALRDAQAARREAEMMFIMEARLNAAGKVGPKPAAPPPPSDFYP
Ga0070678_1003129361	3300005456	Miscanthus Rhizosphere	MGFGVLFLLLLVTAGWWLHSRWSALRDAQAARREAEMMFIMEARLNAAGKVGPKPAAVPPPSDFYPTLPGK*
Ga0070678_1023843572	3300005456	Miscanthus Rhizosphere	RIPASPPCADSMGFGVLFLMLLVVAGWWLHSRWSALRDAQDARREAEMMFVMEARSQAGKTAAAAPAAPAPASDFKPTLPGPR*
Ga0070681_117336481	3300005458	Corn Rhizosphere	MGFTVLFLLLLVTAGWWLHSRWSALRAAQDARREAELLMVFEAQSKVPGKPIKATPAASDFYPTLPEE
Ga0073909_101353042	3300005526	Surface Soil	MGFGVLFLLLLVTAGWWLHYRWSALRDAQAARREAEMMFIMEARLNAAGKVGPKPAAAPPPSDFYPTLPGK*
Ga0070684_1018410812	3300005535	Corn Rhizosphere	MGFGVLFLLLLATAGWWLHSRWSALRDAQAARRQAEMMFIMEARLKAAGKVGPRPAAPPP
Ga0068853_1002484994	3300005539	Corn Rhizosphere	MGFGVLFLLLLATAGWWLHSRWSALRDAQAARRQAEMMFIMEARLKAAGKVGPRPAAPPPPSDFYPTLPGK*
Ga0068853_1009148181	3300005539	Corn Rhizosphere	MGFGVLFLFLLVTAGWWLHSRWSAMREAQSARREAEMMFIMEARLNAAGKVGPRPATPPP
Ga0070686_1000790181	3300005544	Switchgrass Rhizosphere	MAFGVLLLLLLVTAGWWLHSRWSALRDAQAARREAEMMFIMEARLHAAGKVGPRPAAPPAPSDFYPTLPGK*
Ga0070693_1007696371	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	LLVTAGWWLHSRWSAMREAQSARREAEMMFIMEARLNAAGKVGPRPATPPPPSDFYPTLPGK*
Ga0068854_1000182796	3300005578	Corn Rhizosphere	MGFGVLFLFLLVTAGWWLHSRWSAMREAQSARREAEMMFIMEARLNAAGKVGPRPATPPPSDFYPTLPGK*
Ga0068854_1022947331	3300005578	Corn Rhizosphere	LRRIPASPPCADSMGFGVLFLMLLVVAGWWLHSRWSALRDARDARREAEMMFVMEARSQMARPVAAPAAPAPASDFKPTLPGQR*
Ga0070702_1003565681	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	SMGFGVLFLMLLVVAGWWLHSRWSALRDARDARREAEMMFVMEARSQVARPVAAPAAPAPASDFKPTLPGQR*
Ga0068852_1007452541	3300005616	Corn Rhizosphere	ATAGWWLHSRWSALRDAQAARRQAEMMFIMEARLKAAGKVGPRPAAPPPPSDFYPTLPGK
Ga0068852_1018374522	3300005616	Corn Rhizosphere	MGFGVLFVMLLAVAGWWLHSRWAALRDARDARREAEMMFVMEARAQVRKPVEAPPASPAAPSEFNPTLPGKR*
Ga0068864_1011123152	3300005618	Switchgrass Rhizosphere	MGFGVLFLMLLVVAGWWLHSRWSALRDAQDARREAEMMFVMEARSQAGKTAAAAPAAPAPASDFKPT
Ga0068866_103871602	3300005718	Miscanthus Rhizosphere	MGFGVLFLMLLVVAGWWLHSRWSALRDAQDARREAEMMFVMEARSQVGKPAEARAAPV
Ga0068861_1015497612	3300005719	Switchgrass Rhizosphere	LLLLVTAGWWLHSRWSALRDAQAARREAEMMFIMEARLHAAGKVAAKPAAASAPSDFCPTLPGK*
Ga0068870_113660102	3300005840	Miscanthus Rhizosphere	MGFGVLFLMLLVVAGWWLHSRWSALRDAQDARREAEMMFVMEARSQAGKTAAAAPAAPAPASDFKPTLPGQR*
Ga0068863_1001323313	3300005841	Switchgrass Rhizosphere	MGFGVLFLMLLVVAGWWLHSRWSALRDARDARREAEMMFVMEARSQVARPVAAPAAPAPASDFKPTLPGQR*
Ga0068863_1005163881	3300005841	Switchgrass Rhizosphere	SMGFGVLFLMLLVVAGWWLHSRWSALRDAQDARREAEMMFVMEARSQVGKPAEARAAPVPASDFNPTLPGKG*
Ga0070716_1005140532	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MGFGVLFLLLLVTAGWWLHSRWSALRDAQSARREAEMMLIMEARLSAAGKAGPRPATPPAPSDFYPTLPGK*
Ga0097621_1010941162	3300006237	Miscanthus Rhizosphere	MGFGVLFLLLLVTAGWWLHSRWSALREAQSARREAEMMFIMEARLHAAGKVGPKPAAPSPASDFY
Ga0068865_1000598141	3300006881	Miscanthus Rhizosphere	VSFGILFLLLLVTAGWWLYKRWSALRAAQEARREAELMLVFEARSKMPAKPVQATPPASDFYPTLPE
Ga0068865_1007511733	3300006881	Miscanthus Rhizosphere	MGFGVLFLLLLVTAGWWLHSRWSALRDAQAARREAEMMFIMEARLNAAGKVGPKPAAPPPPSDFYPT
Ga0111539_123333831	3300009094	Populus Rhizosphere	MGFGVLFLLLLATAGWWLHSRWSALRDAQSARRQAEMMFIMEARLKAAGKVGPRPAAPPPPSDFYPTLPGK*
Ga0105248_109104912	3300009177	Switchgrass Rhizosphere	MGFGVLFLLLLVTAGWWLHSRWSAMRDAQTARREAEMMFIMEARLNAAGKVGPRPATPPPPSDFYPTLPGK*
Ga0105248_112074252	3300009177	Switchgrass Rhizosphere	MAFGVLLLLLLVTAGWWLHSRWSALRDAQAARREAEMMFIMEARLHAAGKTGPRPAAPPAPSEFYPTLPGK*
Ga0105248_131311821	3300009177	Switchgrass Rhizosphere	MGFGVLFLLLVVTAGWWLHSRWSAVRDAQAARREAEMMFIMEARLNAAGKVGPRPVTPPPPSDFYPTLPGK*
Ga0105237_123717901	3300009545	Corn Rhizosphere	MAFSVLLLLLLVTAGWWLHSRWSALRDAQAARREAEMMFIMEARLHAAGKVAAKPAAASAPSDFCPTLPGK*
Ga0105238_114807602	3300009551	Corn Rhizosphere	MGFTVLFLLLLVTAGWWLHSRWSALRSAQDARREAELMMVFEARSKMKDKPATATPAASDFYPTLPEEAQ
Ga0126383_123658522	3300010398	Tropical Forest Soil	MGFTVLFLLLLVTAGWWLHSRWSALREAQDARREAELMMVFEARSKAKEKPAATTPAASDFYPTLPEQAQ
Ga0134121_107235232	3300010401	Terrestrial Soil	MGFGVLFLLLLVTAGWWLHSRWSALRDTQTARREAEMMFIMEARMNAAGKVGPRPPAPPAPSDFYPTLPGK*
Ga0150985_1022344021	3300012212	Avena Fatua Rhizosphere	MGFGVLFLLLLVTAGWWLHSRWSALRDAQTARREAEMMLIMEARLNAAGKAGPRPATPPPPSD
Ga0150985_1078884612	3300012212	Avena Fatua Rhizosphere	MGFGVLFLLLLVTAGWWLHSRWSALRDAQSARREAEMMFIMEARLHAAGKVGPKPAAPPSASDFYPTL
Ga0157292_101398281	3300012900	Soil	MGFGVLFLLLLVTAGWWLHSRWSALRDVQAARREAEMMFIMEARLNAAGKAGPKPGAPPP
Ga0157296_101082742	3300012905	Soil	MGFGVLFLLLLVTAGWWLHSRWSALRDVQAARREAEMMFIMEARLNAAGKAGPKPGAPPPASDFYPTLPGK*
Ga0157286_102758281	3300012908	Soil	MGFGVLFLLLLVTAGWWLHSRWSALRDAQAARREAEMMFIMEARLHAAGKAGAKPAAPAAPSDFNPTLPGK*
Ga0157301_103791082	3300012911	Soil	MGFGVLFLLLLVTAGWWLHSRWSALRDTQEARREAEMMFSMEARLNAAGKVGPKPAAPPPPSDVYLTLPGK*
Ga0134087_104731011	3300012977	Grasslands Soil	MGFGVLFLLLLVTAGWWLHSRWSALRDAQSARREAEMMLIMEARLNAAGKVGPRPATPPPPSDFYPTLPGK*
Ga0164309_105289092	3300012984	Soil	MGFGVLFLLLLVTAGWWLHSRWSALRDTQTARREAEMMFIMEARMNAAGKVGPRPPAPP
Ga0164307_108841402	3300012987	Soil	MGFGVLFLLLLVTAGWWLHSRWSALRDAQTARREAEMMFIMEARMNAAGKVGPRPPAPPAPSDFYPTLPGK*
Ga0157374_103472383	3300013296	Miscanthus Rhizosphere	MGFGVLFLMLLVVAGWWLHSRWSALRDARDARREAEMMFVMEARSQMARPVAAPAAPAPASDFKPT
Ga0157378_113659133	3300013297	Miscanthus Rhizosphere	VTAGWWLHSRWSALREAQSARREAEMMFIMEARLHAAGKVGPKPAAPSPASDFYPTLPGK
Ga0157378_117400721	3300013297	Miscanthus Rhizosphere	MGFGVLFLLLLVTAGWWLHSRWSALRDAQAARREAEMMFIMEARLNAAGKVGPKPAAVPPPSD
Ga0157378_120317342	3300013297	Miscanthus Rhizosphere	MGFGVLFLLLLVTAGWWLHSRWSALREAQSARREAEMMFIMEARLNAAGKVGPSPVTPPPPSDFYPTLPGK*
Ga0157375_101505095	3300013308	Miscanthus Rhizosphere	MGFGVLFLLLLVTAGWWLHSRWSALREAQSARREAEMMFIMEARLHAAAKVGPKPAAPSSASDFYPTLPGK*
Ga0157375_117113801	3300013308	Miscanthus Rhizosphere	MGFGVLFLLLLVTAGWWLHYRWSALRDAQAARREAEMMFIMEARLNAAGKVGPKPAAPPPPSDFYPT
Ga0134079_100306862	3300014166	Grasslands Soil	MGFGVLFLLLLVTAGWWLHSRWSALRDAQSARREAEMMLIMEARLSAAGKVGPRPATPPPPSDFYPTLPGK*
Ga0163163_101585904	3300014325	Switchgrass Rhizosphere	SMGFGVLFLMLLVVAGWWLHSRWSALRDARDARREAEMMFVMEARSQMARPVAAPAAPAPASDFKPTLPGQR*
Ga0157380_110013341	3300014326	Switchgrass Rhizosphere	ARTSMGFGVLFLLLLVTAGWWLHSRWSALRDAQAARREAEMMFIMEARLHAAGKVAPRPAAPPAPSDFYPTLPGK*
Ga0157380_110453581	3300014326	Switchgrass Rhizosphere	MGFGVLFLLLLVTAGWWLHSRWSALRDAQAARREAEMMFIMEARLHAAGKVAPRPAAPPAPSDFYLTFPGR*
Ga0157377_106711652	3300014745	Miscanthus Rhizosphere	MGFGVLFLMLLVVAGWWLHSRWSALRDARDARREAEMMFVMEARSQMARPVAAPAAPAPASDFKPTLPGPR*
Ga0157377_107543891	3300014745	Miscanthus Rhizosphere	TSMGFGVLFLLLLVTAGWWLHSRWSAVRDAQAARREAEMMFIMEARLNAAGKVGPRPVTPPPPSDFYPTLPGK*
Ga0157379_111585712	3300014968	Switchgrass Rhizosphere	MGFGVLFLMLLVVAGWWLHSRWSALRDAQNARREAEMMFVMEARSQVGKPAEARAAPVPASDFNPTLPGKG*
Ga0173480_101033983	3300015200	Soil	MGFGVLFLLLLVTAGWWLHSRWSALRDAQAARREAEMMFIMEARLHAAGKVAPRPAAPPARSDFYPTLPGK*
Ga0132258_104512685	3300015371	Arabidopsis Rhizosphere	MGFGVLFLLLLVTAGWWLHSRWSAMRDAQSARREAEMMFIMEARLNAVGKVGPRPATPPPPSDFYPTLPGK*
Ga0132258_119707433	3300015371	Arabidopsis Rhizosphere	MGFGVLFLLLLVTAGWWLHSRWSAVRAAQHARREAELMIVFEARSKMPEKPLETASATSDFYPTLP
Ga0132258_122069793	3300015371	Arabidopsis Rhizosphere	MGFGVLFLLLLVTAGWWLHSRWSALRDAQAARREAEMMFIMEARLQAAGKVAPRPAAPPAPSDFYPTLPGK*
Ga0132258_133041012	3300015371	Arabidopsis Rhizosphere	MAFGVLLLLLLVTAGWWLHSRWSALRDAQAARREAEMMFIMEARLHAAGKAGPKPAAPPAPSEFYPTLPGK*
Ga0132257_1006155752	3300015373	Arabidopsis Rhizosphere	MGFGVLFLLLLVTAGWWLHYRWSALRDAQAARREAEMMFIMEARLNAAGKVGPKPAAPSPPSDFYPTLPGK*
Ga0132255_1017418871	3300015374	Arabidopsis Rhizosphere	MGFGVLFLLLLVTAGWWLHSRWSAMRDAQSARREAEMMFIMEARLNAVGKVGPRPATPP
Ga0132255_1056605092	3300015374	Arabidopsis Rhizosphere	MGFGVLFLLLLVTAGWWLHSRWSALRDAQSARREAEMMLIMEARLAAGKVGPRPATPPPPSDFYPTLPGK*
Ga0182034_112635471	3300016371	Soil	MGFTVLFLLLLVTAGWWLHSRWSALREAQEARREAELMMVFEARSNAKEKPAAQTPAASDFYPTLPEQAQQQ
Ga0163161_109202032	3300017792	Switchgrass Rhizosphere	MGFGVLFLMLLVVAGWWLHSRWSALRDAQDARREAEMMFVMEARSQAGKTAAAAPAAPAPASDFKPTLPGPR
Ga0066662_107602912	3300018468	Grasslands Soil	MSFGVLFLLLVVSAGWWLHSRWAALRDAREARREAEMLFVFEARQNGSPKPAPSRVAPAPASDFYPTLPGKG
Ga0066662_129980642	3300018468	Grasslands Soil	MGFSVLFLLLLVTAGWWLHSRWSALRDAQSARREAEMMLIMEARLNTAGKVGPRPATPPPPSDFYPTLPGK
Ga0190270_111365203	3300018469	Soil	LVTAGWWLHSRWSALRDAQAARREAEMMFIMEARLNAAGKAGAKPAAPPPTSDFYPTLPG
Ga0190274_100296431	3300018476	Soil	GWWLHSRWSAVREAQAARREAEMMFIMEARLDAAGKVGPRPATPQPPPSDFYRTLPGK
Ga0190271_100761184	3300018481	Soil	MGFGVLFLLLLVTAGWWLHSRWSALRDAQAARREAEMMFIMEARLHAAGKVAPKPAAPAASSDFYPTLPGK
Ga0190273_101345315	3300018920	Soil	RWSALRDAQAARREAEMLYVLEARSHAGARRADAPAATPEATDFFPTLPGKG
Ga0190273_108747492	3300018920	Soil	MGFGVLFLLLLVTAGWWLHSRWSALRDARAARREAEMLYVFEARSHAGARRAEAPAATPEATDFFPTLPGKG
Ga0173481_103214441	3300019356	Soil	FLLLLVTAGWWLHSRWSALRDVQAARREAEMMFIMEARLNAAGKAGPKPGAPPPASDFYPTLPGK
Ga0173482_106290821	3300019361	Soil	MGFGVLFLLLLVTAGWWLHSRWSALRDAQAARREAEMMFIMEARLHAAGKVAAKPAAASAPSDFCPTLPGK
Ga0173479_102653552	3300019362	Soil	FLLLLVTAGWWLHSRWSALRDAQAARREAEMMFIMEARLHAAGKVAAKPAAASAPSDFCPTLPGK
Ga0206353_102736332	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	MGFGVLFLLLLATAGWWLHSRWSALRDAQAARRQAEMMFIMEARLNAAGKVGPRPAAPPPPSDFYPTLPGK
Ga0210380_100257163	3300021082	Groundwater Sediment	MGFGVLFLMLLVVAGWWLHSRWSALRDAQDARREAEMMFVMEARSQVGKPAAAPTAPAPANDFRPTLPGKG
Ga0182009_100533541	3300021445	Soil	MGFGVLFLLLLVTAGWWLHSRWSALRDAQIARREAEMMFIMEARMNAAGKVGPRPPTPAASPAPSDFYPTLP
Ga0207656_104010942	3300025321	Corn Rhizosphere	MGFGVLFLLLLVTAGWWLHSRWSALRDAQAARREAEMMFIMEARLHAAGKVGPKPAAPSPASDFYPTLPGK
Ga0207656_107203712	3300025321	Corn Rhizosphere	GVLFLLLLVTAGWWLHSRWSAVRDAQAARREAEMMFIMEARLDAAGKVGPRPVTPPPPSDFYPTLPGK
Ga0207682_102390471	3300025893	Miscanthus Rhizosphere	FLLLLVTAGWWLHSRWSALRDAQAARREAEMMFIMEARLNAAGKVGPKPAAVPPPSDFYPTLPGK
Ga0207682_102452011	3300025893	Miscanthus Rhizosphere	LLVTAGWWLHSRWSAMREAQSARREAEMMFIMEARLNAAGKVGPRPATPPPPSDFYPTLPGK
Ga0207688_103702312	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MGFGVLFLLLLVTAGWWLHSRWSAVRDAQAARREAEMMFIMEARLNAAGKVGPRPVTPPPPSDFYPT
Ga0207680_103304451	3300025903	Switchgrass Rhizosphere	MGFGVLFLFLLVTAGWWLNSRWSAMREAQSARREAEMMFIMEARLNAAGKVGPRPATPPPPSDFYPTLPGK
Ga0207680_106422112	3300025903	Switchgrass Rhizosphere	MGFGVLFLLLLVTAGWWLHSRWSAMRDAQTARREAEMMFIMEARLNAAGKVGPRPVTPPPPSDFYPTLPGK
Ga0207645_101410202	3300025907	Miscanthus Rhizosphere	MGFGVLFLLLLVTAGWWLHSRWSAVRDAQAARREAEMMFIMEARLNAAGKVGPRPVTPPPPSDFYPTLPGK
Ga0207645_105061452	3300025907	Miscanthus Rhizosphere	MGFGVLFLFLLVTAGWWLHSRWSAMREAQSARREAEMMFIMEARLNAAGKVGPRPATPPPPSDFYPTLPGK
Ga0207643_102270503	3300025908	Miscanthus Rhizosphere	MGFGVLFLLLLVTAGWWLHSRWSALREAQSARREAEMMFIMEARLHAAGKVGPKPAAPSPASDFYPTLPGK
Ga0207643_108005121	3300025908	Miscanthus Rhizosphere	MGFSVLFLLLLVTAGWWLHSRWSALRDAQAARREAEMMFIMEARLNAAGKAGAKPAAPAAPSDFNPTLPGK
Ga0207705_104382211	3300025909	Corn Rhizosphere	MGFGVLFLLLLVTAGWWLHSRWSAVRDAQAARREAEMMFIMEARLNAAGKLGPRPVTPPPPSDFYPTLPGK
Ga0207657_102890793	3300025919	Corn Rhizosphere	MGFGVLFLLLLATAGWWLHSRWSALRDAQAARRQAEMMFIMEARLKAAGKVGPRPAAPPPPSDFYPTLPGK
Ga0207694_118712661	3300025924	Corn Rhizosphere	LMLLVVAGWWLHSRWSALRDAQDARREAEMMFVMEARSQAGKTAAAAPAAPAPASDFKPTLPGPR
Ga0207650_100703382	3300025925	Switchgrass Rhizosphere	MGFGVLFLLLLVTAGWWLHHRWSALRDAQAARREAEMMFIMEARLNAAGKAGAKPAAPPAPSDFNPTLPGK
Ga0207650_101342553	3300025925	Switchgrass Rhizosphere	MGFGVLFLMLLVVAGWWLHSRWSALRDARDARREAEMMFVMEARSQMARPVAAPAAPAPASDFKPTLPGQR
Ga0207650_102099343	3300025925	Switchgrass Rhizosphere	MGFGVLFLLLLVTAGWWLHSRWSALREAQSARREAEMMFIMEARLHAAGKVGPKPAALSPASDFYPTLPGK
Ga0207659_109179362	3300025926	Miscanthus Rhizosphere	MGFTVLFLLLLVTAGWWLHSRWSALRAAQDARREAELLMVFEAQSKVPGKPIKATPAASDFYPTLPGK
Ga0207687_110639642	3300025927	Miscanthus Rhizosphere	MGFGVLFLMLLVVAGWWLHSRWSALRDAQDARREAEMMFVMEARSQAGKTAAAAPAAPAPASDF
Ga0207701_103489872	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MGFGVLFLLLLVTAGWWLHSRWSALRDAQAARREAEMMFIMEARLHAAGKVAPRPAAPPAPSDFYPTLPGK
Ga0207701_104822391	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MGFGVLFLLLLVTAGWWLHSRWSALRDTQAARREAEMMFIMEARLNAAGKVGPKPATSPPPSDFYPTLPGK
Ga0207644_102252292	3300025931	Switchgrass Rhizosphere	MGFGVLFLLLLVTAGWWLHSRWSALRDAQAARREAEMMFIMEARLHAAGKVGPRPAAPPAPSDFYPTLPGK
Ga0207644_105650483	3300025931	Switchgrass Rhizosphere	MGFGVLFLLLLVTAGWWLHSRWSALRDAQSARREAEMMLIMEARLAAAGKVGPRPATPPPPSDFYPTLPGK
Ga0207690_108236871	3300025932	Corn Rhizosphere	MGFGVLFLLLLATAGWWLHSRWSALRDAQAARRQAEMMFIMEARLKVAGKVGPRPAAPPPPSDFYPTLPGK
Ga0207669_103199523	3300025937	Miscanthus Rhizosphere	MGFGVLFLLLLVTAGWWLHSRWSALRDTQAARREAEMMFIMEARLNAAGKAGPKPAAQPPPSDFYPTLPGK
Ga0207704_103658381	3300025938	Miscanthus Rhizosphere	MGFGVLFLMLLVVAGCWLHSRWSALRDAQDARREAEMMFVMEARSQAGKTAAAAPAAPAPASDFKPTLPGPR
Ga0207704_104100162	3300025938	Miscanthus Rhizosphere	MGFGVLFLLLLVTAGWWLHSRWSALRDAQAARREAEMMFIMEARLNAAGKVGPKPAAPPPPSDFYP
Ga0207665_103336123	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MGFGVLFLLLLATAGWWLHSRWSALRDAQSARREAEMMLIMEARLSAAGKAGPRPATPPAPSDFYPTLPGK
Ga0207691_105316323	3300025940	Miscanthus Rhizosphere	VAGWWLHSRWSALRDAQDARREAEMMFVMEARSQVGKPAEARAAPVPASDFNPTLPGKG
Ga0207711_117899681	3300025941	Switchgrass Rhizosphere	MAFGVLLLLLLVTAGWWLHSRWSALRDAQAARREAEMMFIMEARLHAAGKAGPKPAAPPAPSEFYPTLPGK
Ga0207679_117683392	3300025945	Corn Rhizosphere	MGFGVLFLFLLVTAGWWLHSRWSAMREAQSARREAEMMFIMEARLNAAGKAGAKPAAPAAPSDFNPTLPGK
Ga0207651_111703761	3300025960	Switchgrass Rhizosphere	PPCADSMGFGVLFLMLLVVAGWWLHSRWSALRDARDARREAEMMFVMEARSQMARPVAAPAAPAPASDFKPTLPGQR
Ga0207651_115526501	3300025960	Switchgrass Rhizosphere	MGFGVLFLLLLVTAGWWLHSRWSAMRDAQTARREAEMMFIMEARLNAAGKVGPRPVTPPPPSDFYPTL
Ga0207640_107055053	3300025981	Corn Rhizosphere	VLFLLLLATAGWWLHSRWSALRDAQAARRQAEMMFIMEARLKAAGKVGPRPAAPPPPSDFYPTLPGK
Ga0207640_113226982	3300025981	Corn Rhizosphere	AGWWLHSRWSALRDARDARREAEMMFVMEARSQMARPVAAPAAPAPASDFKPTLPGQR
Ga0207677_101517094	3300026023	Miscanthus Rhizosphere	MAFGVLLLLLLVTAGWWLHSRWSALRDAQAARRQAEMMFIMEARMNAAGKVGPKPAAPPA
Ga0207678_106559132	3300026067	Corn Rhizosphere	MGFGVLFLLLLATAGWWLHSRWSALRDAQAARRQAEMMFIMEARLNAAGKVGPRPAAPP
Ga0207678_115429871	3300026067	Corn Rhizosphere	SEDFMGFGVLFLMLLVVAGWWLHSRWSALRDAQDARREAEMMFVMEARSQAGKTAAAAPAAPAPASDFKPTLPGPR
Ga0207641_100703134	3300026088	Switchgrass Rhizosphere	MGFGVLFLMLLVVAGWWLHSRWSALRDARDARREAEMMFVMEARSQVARPVAAPAAPAPASDFKPTLPGQR
Ga0207641_112705192	3300026088	Switchgrass Rhizosphere	LLLVTAGWWLHSRWSALRDAQAARREAEMMFIMEARLHAAGKVAAKPAAASAPSDFCPTLPGK
Ga0207641_112919141	3300026088	Switchgrass Rhizosphere	MGFGVLFLLLLVTAGWWLHSRWSALREAQSARREAEMMFIMEARLHAAGKVGPKPAAPPPASDFYPTLPGK
Ga0207676_124618641	3300026095	Switchgrass Rhizosphere	MGFGVLFLLLLVTAGWWLHSRWSALREAQSARREAEMMFIMEARLHAAGKVGPKPAAPPPASDF
Ga0207683_107337481	3300026121	Miscanthus Rhizosphere	LLVTAGWWLHSRWSALRDAQAARREAEMMFIMEARLNAAGKVGPKPAAVPPPSDFYPTLPGK
Ga0207698_103649011	3300026142	Corn Rhizosphere	MGFGVLFVMLLAVAGWWLHSRWAALRDARDARREAEMMFVMEARAQVRKPVEAPPASPAAPSEFNPTLPGKR
Ga0268266_114183722	3300028379	Switchgrass Rhizosphere	MGFGVLFLLLLVTAGWWLHSRWSALRDAQAARREAEMMFIMEARLNAAGKVGPKPAAPPP
Ga0247828_101661413	3300028587	Soil	MGFGVLFLLLLVTAGWWLHSRWSALRDVQAARREAEMMFIMEARLNAAGKAGPKPAAPPPASDFYPTLPGK
Ga0247821_105098472	3300028596	Soil	MGFGVLFLLLLVTAGWWLHSRWSALRDAQAARREAEMMVIMEARLNAAGKVGPKPAAPPAPSDFYPTLPGK
Ga0307288_102620241	3300028778	Soil	MGFGVLFLLLLVTAGWWLHSRWSALREAQSARREAEMMFIMEARLHAAGKVGPKPAAPSP
Ga0307495_101749811	3300031199	Soil	MGFGVLFLLLLVTAGWWLHYRWSALRDAQAARREAEMMFIMEARLHAAGKAGPRPAAPPAPSDFYPTLPGK
Ga0307469_110357982	3300031720	Hardwood Forest Soil	MAFGILFLLFIVTTGWWLHNRWSALRDAQAARREAEALYVFEARSTAKPPASPPTAASDFTPTLPGKS
Ga0307405_100067997	3300031731	Rhizosphere	MGFTVLFLLLVGTAGWWLHSRWAAVRDAQAARREAELLIVFEARSKMPEKPQATTPAASDFYPTLPEAEVAKPAANGR
Ga0318554_100440322	3300031765	Soil	MGFTVLFLLLLVTAGWWLHSRWSALREAQEARREAELMMVFEARSNAKEKPAAQTPAASDFYPTLPEQARRPRETE
Ga0318568_107507481	3300031819	Soil	MGFTVLFLLLLVTAGWWLHSRWSALREAQEARREAELMMVFEARSKAKEKPAATTPAASDFYPTLPEQAQ
Ga0310904_104612563	3300031854	Soil	MAFGVLLLLLLVTAGWWLHSRWSALRDAQAARREAEMMFIMEARLNAAGKVGPKPATPPPPSDFYPT
Ga0308175_1001482411	3300031938	Soil	MGFTVLFLLLVVTAGWWLHSRWSAVRDAQAARREAEMMIVFETRSKMPGKATAAPAATSD
Ga0308175_1006160132	3300031938	Soil	MGFGVLFLLLLVTAGWWLHSRWSAVREAQAARREAEMMFIMEARLNAAGKVRPRPATPPPPSDFYPTLPGK
Ga0308174_100352513	3300031939	Soil	MGFGVLFVLLLVTAGWWLHSRWSALRDAQSARREAEMMFIMEARLNAAGKVGPRPAMPPPPSDFYPTLPGK
Ga0308174_100600384	3300031939	Soil	MGFGVLFLLLLVTAGWWLHSRWSALRDAQSARREAEMMLIMEARLSAAGKVGPRPATPPPPSDFYPTLPGK
Ga0308174_102357192	3300031939	Soil	MGFGVLFVMLLAVAGWWLHSRWAALRDARDARREAEMMFVMEARSQVRKPGEAPASPAPPSDFNPTLPGKR
Ga0308174_107299742	3300031939	Soil	MGFGVLFLLLLATAGWWLHNRWSALRDAQSARREAEMMLIMEARLNAAGKAGPRPATTPPPSDFYPTLPGK
Ga0310884_107935772	3300031944	Soil	MGFGVLFLLLLVTAGWWLHYRWSALRDAQAARREAEMMFIMEARLHAAGKVGPKPAAPTPPSDFYPTLPGK
Ga0308173_112602671	3300032074	Soil	MGFGVLFLLLLVTAGWWLHSRWSALRDAQAARREAETLYVFEVRSKAAPTQAAPQAPSDFYPTLPS
Ga0308173_120329752	3300032074	Soil	MSFGVLFLFLLVTAGWWLHSRWSALRDAQSARREAETMFIMEARLNAAGKVGPRPATPPPPSDFFPTLPGK
Ga0247830_116064092	3300033551	Soil	MGFGVLFLLLLVTAGWWLHSRWSALRDVQAARREAEMMFIMEARLNAAGKAGAKPAAPAPPSDFYPTLPGK
Ga0370484_0020403_239_454	3300034125	Untreated Peat Soil	MGFGVLFLLLLVTAGWWLHSRWSALRDAQAARREAEMLYIFEARSNAAGKVGPRPAAPPAPSDFYPTLPGK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F035916

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences