NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F035989

Metagenome Family F035989

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F035989
Family Type Metagenome
Number of Sequences 171
Average Sequence Length 73 residues
Representative Sequence MAPEDVHHLRAVGRAAGGGSDYFGSFAEVRGAHYRRGYDGELFHILAAEVIEAVHRASGDAQRLPGTNL
Number of Associated Samples 158
Number of Associated Scaffolds 171

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 18.13 %
% of genes near scaffold ends (potentially truncated) 94.15 %
% of genes from short scaffolds (< 2000 bps) 91.23 %
Associated GOLD sequencing projects 149
AlphaFold2 3D model prediction Yes
3D model pTM-score0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (96.491 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(11.111 % of family members)
Environment Ontology (ENVO) Unclassified
(17.544 % of family members)
Earth Microbiome Project Ontology (EMPO) Unclassified
(28.070 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 52.58%    β-sheet: 0.00%    Coil/Unstructured: 47.42%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.37
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 171 Family Scaffolds
PF02811PHP 4.09
PF13474SnoaL_3 3.51
PF14534DUF4440 2.92
PF13155Toprim_2 1.17
PF08212Lipocalin_2 1.17
PF00144Beta-lactamase 1.17
PF01610DDE_Tnp_ISL3 1.17
PF03949Malic_M 1.17
PF00773RNB 0.58
PF00072Response_reg 0.58
PF13470PIN_3 0.58
PF05193Peptidase_M16_C 0.58
PF00873ACR_tran 0.58
PF05368NmrA 0.58
PF03551PadR 0.58
PF03167UDG 0.58
PF00507Oxidored_q4 0.58
PF05050Methyltransf_21 0.58
PF01566Nramp 0.58
PF06537DHOR 0.58
PF00589Phage_integrase 0.58
PF01926MMR_HSR1 0.58
PF06348DUF1059 0.58
PF13414TPR_11 0.58
PF12852Cupin_6 0.58
PF03631Virul_fac_BrkB 0.58
PF04015DUF362 0.58
PF13181TPR_8 0.58
PF13424TPR_12 0.58
PF00069Pkinase 0.58
PF02817E3_binding 0.58
PF11706zf-CGNR 0.58
PF01432Peptidase_M3 0.58
PF00171Aldedh 0.58
PF03720UDPG_MGDP_dh_C 0.58
PF12867DinB_2 0.58
PF03625DUF302 0.58
PF01637ATPase_2 0.58
PF12833HTH_18 0.58

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 171 Family Scaffolds
COG0515Serine/threonine protein kinaseSignal transduction mechanisms [T] 2.34
COG0281Malic enzymeEnergy production and conversion [C] 1.17
COG0686Alanine dehydrogenase (includes sporulation protein SpoVN)Amino acid transport and metabolism [E] 1.17
COG1680CubicO group peptidase, beta-lactamase class C familyDefense mechanisms [V] 1.17
COG1686D-alanyl-D-alanine carboxypeptidaseCell wall/membrane/envelope biogenesis [M] 1.17
COG2367Beta-lactamase class ADefense mechanisms [V] 1.17
COG3040Bacterial lipocalin BlcCell wall/membrane/envelope biogenesis [M] 1.17
COG3464TransposaseMobilome: prophages, transposons [X] 1.17
COG0014Gamma-glutamyl phosphate reductaseAmino acid transport and metabolism [E] 0.58
COG0339Zn-dependent oligopeptidase, M3 familyPosttranslational modification, protein turnover, chaperones [O] 0.58
COG0508Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) componentEnergy production and conversion [C] 0.58
COG0557Exoribonuclease RTranscription [K] 0.58
COG0692Uracil-DNA glycosylaseReplication, recombination and repair [L] 0.58
COG0838NADH:ubiquinone oxidoreductase subunit 3 (chain A)Energy production and conversion [C] 0.58
COG1012Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenaseLipid transport and metabolism [I] 0.58
COG1164Oligoendopeptidase FAmino acid transport and metabolism [E] 0.58
COG1295Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)Function unknown [S] 0.58
COG1373Predicted ATPase, AAA+ superfamilyGeneral function prediction only [R] 0.58
COG1573Uracil-DNA glycosylaseReplication, recombination and repair [L] 0.58
COG1672Predicted ATPase, archaeal AAA+ ATPase superfamilyGeneral function prediction only [R] 0.58
COG1695DNA-binding transcriptional regulator, PadR familyTranscription [K] 0.58
COG1733DNA-binding transcriptional regulator, HxlR familyTranscription [K] 0.58
COG1846DNA-binding transcriptional regulator, MarR familyTranscription [K] 0.58
COG1914Mn2+ or Fe2+ transporter, NRAMP familyInorganic ion transport and metabolism [P] 0.58
COG2006Uncharacterized conserved protein, DUF362 familyFunction unknown [S] 0.58
COG3439Uncharacterized conserved protein, DUF302 familyFunction unknown [S] 0.58
COG3488Uncharacterized conserved protein with two CxxC motifs, DUF1111 familyGeneral function prediction only [R] 0.58
COG3663G:T/U-mismatch repair DNA glycosylaseReplication, recombination and repair [L] 0.58
COG4230Delta 1-pyrroline-5-carboxylate dehydrogenaseAmino acid transport and metabolism [E] 0.58
COG4776Exoribonuclease IITranscription [K] 0.58

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms96.49 %
UnclassifiedrootN/A3.51 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001356|JGI12269J14319_10255816All Organisms → cellular organisms → Bacteria → Acidobacteria650Open in IMG/M
3300003541|JGI20214J51650_10444592All Organisms → cellular organisms → Bacteria907Open in IMG/M
3300003998|Ga0055472_10299906All Organisms → cellular organisms → Bacteria516Open in IMG/M
3300004000|Ga0055458_10084083All Organisms → cellular organisms → Bacteria854Open in IMG/M
3300004002|Ga0055477_10115220All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_16_54_111065Open in IMG/M
3300004003|Ga0055445_10291028All Organisms → cellular organisms → Bacteria566Open in IMG/M
3300004005|Ga0055448_10173921All Organisms → cellular organisms → Bacteria836Open in IMG/M
3300004008|Ga0055446_10269692All Organisms → cellular organisms → Bacteria522Open in IMG/M
3300004009|Ga0055437_10142934All Organisms → cellular organisms → Bacteria737Open in IMG/M
3300004012|Ga0055464_10170331All Organisms → cellular organisms → Bacteria637Open in IMG/M
3300004014|Ga0055456_10113732All Organisms → cellular organisms → Bacteria879Open in IMG/M
3300004021|Ga0055449_10088566All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1001Open in IMG/M
3300004062|Ga0055500_10142409Not Available562Open in IMG/M
3300004071|Ga0055486_10169228All Organisms → cellular organisms → Bacteria542Open in IMG/M
3300004074|Ga0055518_10087306All Organisms → cellular organisms → Bacteria726Open in IMG/M
3300004077|Ga0055523_10110377Not Available651Open in IMG/M
3300004266|Ga0055457_10102276All Organisms → cellular organisms → Bacteria772Open in IMG/M
3300004633|Ga0066395_10134123All Organisms → cellular organisms → Bacteria1237Open in IMG/M
3300005175|Ga0066673_10356299All Organisms → cellular organisms → Bacteria854Open in IMG/M
3300005178|Ga0066688_10782176All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium599Open in IMG/M
3300005334|Ga0068869_101104591All Organisms → cellular organisms → Bacteria694Open in IMG/M
3300005437|Ga0070710_10233705All Organisms → cellular organisms → Bacteria1175Open in IMG/M
3300005445|Ga0070708_100201170All Organisms → cellular organisms → Bacteria → Acidobacteria1865Open in IMG/M
3300005534|Ga0070735_10125580All Organisms → cellular organisms → Bacteria1601Open in IMG/M
3300005542|Ga0070732_10427490All Organisms → cellular organisms → Bacteria800Open in IMG/M
3300005543|Ga0070672_101856002All Organisms → cellular organisms → Bacteria542Open in IMG/M
3300005569|Ga0066705_10944190All Organisms → cellular organisms → Bacteria511Open in IMG/M
3300005591|Ga0070761_10090440All Organisms → cellular organisms → Bacteria1754Open in IMG/M
3300006034|Ga0066656_10477731All Organisms → cellular organisms → Bacteria813Open in IMG/M
3300006050|Ga0075028_100326308All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium861Open in IMG/M
3300006055|Ga0097691_1020538All Organisms → cellular organisms → Bacteria → Acidobacteria2861Open in IMG/M
3300006059|Ga0075017_100643534All Organisms → cellular organisms → Bacteria813Open in IMG/M
3300006163|Ga0070715_10200939All Organisms → cellular organisms → Bacteria → Proteobacteria1012Open in IMG/M
3300006174|Ga0075014_100539281All Organisms → cellular organisms → Bacteria659Open in IMG/M
3300006224|Ga0079037_102280087All Organisms → cellular organisms → Bacteria541Open in IMG/M
3300006354|Ga0075021_10102408All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium1702Open in IMG/M
3300009053|Ga0105095_10080282All Organisms → cellular organisms → Bacteria1762Open in IMG/M
3300009089|Ga0099828_12013010All Organisms → cellular organisms → Bacteria505Open in IMG/M
3300009091|Ga0102851_13289166All Organisms → cellular organisms → Bacteria519Open in IMG/M
3300009101|Ga0105247_11730729All Organisms → cellular organisms → Bacteria518Open in IMG/M
3300009111|Ga0115026_10046795All Organisms → cellular organisms → Bacteria2361Open in IMG/M
3300009111|Ga0115026_10680957All Organisms → cellular organisms → Bacteria790Open in IMG/M
3300009137|Ga0066709_101655752All Organisms → cellular organisms → Bacteria911Open in IMG/M
3300009167|Ga0113563_10146391All Organisms → cellular organisms → Bacteria → Proteobacteria2266Open in IMG/M
3300009176|Ga0105242_11559576All Organisms → cellular organisms → Bacteria693Open in IMG/M
3300009506|Ga0118657_10966048All Organisms → cellular organisms → Bacteria1045Open in IMG/M
3300009548|Ga0116107_1140209All Organisms → cellular organisms → Bacteria676Open in IMG/M
3300009551|Ga0105238_11735056All Organisms → cellular organisms → Bacteria656Open in IMG/M
3300009617|Ga0116123_1043962All Organisms → cellular organisms → Bacteria → Acidobacteria1295Open in IMG/M
3300009631|Ga0116115_1199118All Organisms → cellular organisms → Bacteria506Open in IMG/M
3300009632|Ga0116102_1146019All Organisms → cellular organisms → Bacteria → Acidobacteria653Open in IMG/M
3300009672|Ga0116215_1543152All Organisms → cellular organisms → Bacteria502Open in IMG/M
3300010361|Ga0126378_10316212All Organisms → cellular organisms → Bacteria1667Open in IMG/M
3300010366|Ga0126379_12134650All Organisms → cellular organisms → Bacteria662Open in IMG/M
3300010375|Ga0105239_11978044All Organisms → cellular organisms → Bacteria676Open in IMG/M
3300010379|Ga0136449_103312856All Organisms → cellular organisms → Bacteria619Open in IMG/M
3300010397|Ga0134124_11752215All Organisms → cellular organisms → Bacteria654Open in IMG/M
3300012198|Ga0137364_10381107All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1054Open in IMG/M
3300012200|Ga0137382_10669397All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium743Open in IMG/M
3300012350|Ga0137372_10042173All Organisms → cellular organisms → Bacteria4101Open in IMG/M
3300012359|Ga0137385_11232045All Organisms → cellular organisms → Bacteria610Open in IMG/M
3300012931|Ga0153915_10815754All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes1082Open in IMG/M
3300012931|Ga0153915_11603861Not Available761Open in IMG/M
3300012931|Ga0153915_12062142All Organisms → cellular organisms → Bacteria667Open in IMG/M
3300012931|Ga0153915_12717377All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium578Open in IMG/M
3300012964|Ga0153916_11987148All Organisms → cellular organisms → Bacteria652Open in IMG/M
3300014151|Ga0181539_1287529All Organisms → cellular organisms → Bacteria606Open in IMG/M
3300014151|Ga0181539_1368050All Organisms → cellular organisms → Bacteria517Open in IMG/M
3300014152|Ga0181533_1055634All Organisms → cellular organisms → Bacteria → Proteobacteria2003Open in IMG/M
3300014153|Ga0181527_1029643All Organisms → cellular organisms → Bacteria3286Open in IMG/M
3300014158|Ga0181521_10390480All Organisms → cellular organisms → Bacteria688Open in IMG/M
3300014272|Ga0075327_1227293All Organisms → cellular organisms → Bacteria603Open in IMG/M
3300014498|Ga0182019_10241444All Organisms → cellular organisms → Bacteria → Acidobacteria1185Open in IMG/M
3300014638|Ga0181536_10459965All Organisms → cellular organisms → Bacteria559Open in IMG/M
3300015373|Ga0132257_102563628All Organisms → cellular organisms → Bacteria → Acidobacteria663Open in IMG/M
3300016270|Ga0182036_11360851All Organisms → cellular organisms → Bacteria593Open in IMG/M
3300016319|Ga0182033_10531022All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1015Open in IMG/M
3300016387|Ga0182040_11749944Not Available531Open in IMG/M
3300016404|Ga0182037_10391801All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1142Open in IMG/M
3300016422|Ga0182039_10472198All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1079Open in IMG/M
3300017931|Ga0187877_1160963All Organisms → cellular organisms → Bacteria897Open in IMG/M
3300017995|Ga0187816_10338908All Organisms → cellular organisms → Bacteria663Open in IMG/M
3300018018|Ga0187886_1118126All Organisms → cellular organisms → Bacteria1084Open in IMG/M
3300018023|Ga0187889_10128647All Organisms → cellular organisms → Bacteria → Acidobacteria1221Open in IMG/M
3300018023|Ga0187889_10242379All Organisms → cellular organisms → Bacteria814Open in IMG/M
3300018026|Ga0187857_10239058All Organisms → cellular organisms → Bacteria839Open in IMG/M
3300018086|Ga0187769_10525085All Organisms → cellular organisms → Bacteria894Open in IMG/M
3300019696|Ga0194017_1023503All Organisms → cellular organisms → Bacteria666Open in IMG/M
3300020579|Ga0210407_10462095All Organisms → cellular organisms → Bacteria992Open in IMG/M
3300020583|Ga0210401_10492110All Organisms → cellular organisms → Bacteria → Acidobacteria1089Open in IMG/M
3300021478|Ga0210402_11648121All Organisms → cellular organisms → Bacteria568Open in IMG/M
3300021479|Ga0210410_11254456All Organisms → cellular organisms → Bacteria633Open in IMG/M
3300021559|Ga0210409_11465276All Organisms → cellular organisms → Bacteria558Open in IMG/M
3300021560|Ga0126371_12498693All Organisms → cellular organisms → Bacteria625Open in IMG/M
3300025446|Ga0208038_1027189All Organisms → cellular organisms → Bacteria → Acidobacteria1282Open in IMG/M
3300025469|Ga0208687_1058307All Organisms → cellular organisms → Bacteria916Open in IMG/M
3300025555|Ga0210121_1084368All Organisms → cellular organisms → Bacteria533Open in IMG/M
3300025556|Ga0210120_1122836All Organisms → cellular organisms → Bacteria520Open in IMG/M
3300025599|Ga0210074_1011440All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria2693Open in IMG/M
3300025857|Ga0209014_10134010All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium926Open in IMG/M
3300025898|Ga0207692_10752938All Organisms → cellular organisms → Bacteria635Open in IMG/M
3300025898|Ga0207692_11026592All Organisms → cellular organisms → Bacteria545Open in IMG/M
3300025905|Ga0207685_10186643All Organisms → cellular organisms → Bacteria965Open in IMG/M
3300025906|Ga0207699_10330766All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1071Open in IMG/M
3300025910|Ga0207684_11058993All Organisms → cellular organisms → Bacteria676Open in IMG/M
3300025911|Ga0207654_11361075All Organisms → cellular organisms → Bacteria518Open in IMG/M
3300025939|Ga0207665_11353073All Organisms → cellular organisms → Bacteria567Open in IMG/M
3300026023|Ga0207677_10996312All Organisms → cellular organisms → Bacteria760Open in IMG/M
3300027045|Ga0207726_1003716All Organisms → cellular organisms → Bacteria2836Open in IMG/M
3300027592|Ga0209270_1164755All Organisms → cellular organisms → Bacteria545Open in IMG/M
3300027877|Ga0209293_10392355All Organisms → cellular organisms → Bacteria718Open in IMG/M
3300027894|Ga0209068_10062140All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium1914Open in IMG/M
3300027905|Ga0209415_11054484All Organisms → cellular organisms → Bacteria534Open in IMG/M
3300027910|Ga0209583_10794828All Organisms → cellular organisms → Bacteria503Open in IMG/M
3300027911|Ga0209698_11024057All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium615Open in IMG/M
3300029827|Ga0134606_10013126All Organisms → cellular organisms → Bacteria3164Open in IMG/M
3300029910|Ga0311369_10042034All Organisms → cellular organisms → Bacteria5090Open in IMG/M
3300030053|Ga0302177_10111220All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1576Open in IMG/M
3300030494|Ga0310037_10361339All Organisms → cellular organisms → Bacteria608Open in IMG/M
3300030524|Ga0311357_10040025All Organisms → cellular organisms → Bacteria4839Open in IMG/M
3300031525|Ga0302326_13296124All Organisms → cellular organisms → Bacteria542Open in IMG/M
3300031565|Ga0307379_10757611All Organisms → cellular organisms → Bacteria862Open in IMG/M
3300031566|Ga0307378_10792869All Organisms → cellular organisms → Bacteria799Open in IMG/M
3300031572|Ga0318515_10473761All Organisms → cellular organisms → Bacteria669Open in IMG/M
3300031573|Ga0310915_10276067All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1185Open in IMG/M
3300031669|Ga0307375_10138905All Organisms → cellular organisms → Bacteria1695Open in IMG/M
3300031720|Ga0307469_12507408All Organisms → cellular organisms → Bacteria504Open in IMG/M
3300031727|Ga0316576_10143175All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales1800Open in IMG/M
3300031728|Ga0316578_10652787All Organisms → cellular organisms → Bacteria614Open in IMG/M
3300031754|Ga0307475_10956740All Organisms → cellular organisms → Bacteria674Open in IMG/M
3300031768|Ga0318509_10212209All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1078Open in IMG/M
3300031781|Ga0318547_10853183All Organisms → cellular organisms → Bacteria568Open in IMG/M
3300031846|Ga0318512_10182834All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1021Open in IMG/M
3300031897|Ga0318520_10920793All Organisms → cellular organisms → Bacteria551Open in IMG/M
3300031912|Ga0306921_10157317All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2660Open in IMG/M
3300031941|Ga0310912_10680288All Organisms → cellular organisms → Bacteria798Open in IMG/M
3300031945|Ga0310913_10795537All Organisms → cellular organisms → Bacteria667Open in IMG/M
3300031947|Ga0310909_10362019All Organisms → cellular organisms → Bacteria1217Open in IMG/M
3300031947|Ga0310909_11014169All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium677Open in IMG/M
3300031949|Ga0214473_11949104All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium575Open in IMG/M
3300031954|Ga0306926_10347797All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1833Open in IMG/M
3300031954|Ga0306926_11253109All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium868Open in IMG/M
3300032001|Ga0306922_10611378All Organisms → cellular organisms → Bacteria1154Open in IMG/M
3300032001|Ga0306922_10934167All Organisms → cellular organisms → Bacteria899Open in IMG/M
3300032035|Ga0310911_10529226All Organisms → cellular organisms → Bacteria683Open in IMG/M
3300032063|Ga0318504_10612839All Organisms → cellular organisms → Bacteria523Open in IMG/M
3300032094|Ga0318540_10661171All Organisms → cellular organisms → Bacteria503Open in IMG/M
3300032173|Ga0315268_11135272All Organisms → cellular organisms → Bacteria790Open in IMG/M
3300032180|Ga0307471_102831999All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium616Open in IMG/M
3300032261|Ga0306920_100785923All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium1398Open in IMG/M
3300032342|Ga0315286_10152669All Organisms → cellular organisms → Bacteria2478Open in IMG/M
3300032401|Ga0315275_12616159All Organisms → cellular organisms → Bacteria520Open in IMG/M
3300032897|Ga0335071_10982011Not Available791Open in IMG/M
3300033158|Ga0335077_11063900All Organisms → cellular organisms → Bacteria802Open in IMG/M
3300033289|Ga0310914_11067201All Organisms → cellular organisms → Bacteria708Open in IMG/M
3300033405|Ga0326727_10015319All Organisms → cellular organisms → Bacteria16490Open in IMG/M
3300033405|Ga0326727_10765284All Organisms → cellular organisms → Bacteria754Open in IMG/M
3300033412|Ga0310810_10696018All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter modestus946Open in IMG/M
3300033413|Ga0316603_10522669All Organisms → cellular organisms → Bacteria1092Open in IMG/M
3300033414|Ga0316619_10622862All Organisms → cellular organisms → Bacteria900Open in IMG/M
3300033416|Ga0316622_100693578All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales1177Open in IMG/M
3300033419|Ga0316601_101614044All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium653Open in IMG/M
3300033433|Ga0326726_10289921All Organisms → cellular organisms → Bacteria1533Open in IMG/M
3300033475|Ga0310811_11247859All Organisms → cellular organisms → Bacteria602Open in IMG/M
3300033480|Ga0316620_12431636All Organisms → cellular organisms → Bacteria521Open in IMG/M
3300033513|Ga0316628_100555791All Organisms → cellular organisms → Bacteria → Acidobacteria1490Open in IMG/M
3300033513|Ga0316628_101171074Not Available1023Open in IMG/M
3300033513|Ga0316628_103479828All Organisms → cellular organisms → Bacteria569Open in IMG/M
3300033557|Ga0316617_101187260All Organisms → cellular organisms → Bacteria757Open in IMG/M
3300033804|Ga0314863_081412All Organisms → cellular organisms → Bacteria673Open in IMG/M
3300033977|Ga0314861_0006476All Organisms → cellular organisms → Bacteria9397Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil11.11%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands10.53%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil6.43%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil6.43%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere5.26%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds4.09%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog3.51%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland3.51%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa2.34%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland2.92%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands2.92%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil2.92%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil2.92%
WetlandEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland1.75%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment1.75%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands1.75%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil1.75%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil1.75%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.75%
SoilEnvironmental → Terrestrial → Soil → Clay → Unclassified → Soil1.75%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil1.75%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.75%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.17%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.17%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil1.17%
PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland1.17%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.17%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.17%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere1.17%
SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment0.58%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment0.58%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment0.58%
Marine SedimentEnvironmental → Aquatic → Marine → Coastal → Sediment → Marine Sediment0.58%
WetlandEnvironmental → Aquatic → Marine → Wetlands → Sediment → Wetland0.58%
Mangrove SedimentEnvironmental → Aquatic → Marine → Wetlands → Sediment → Mangrove Sediment0.58%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.58%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.58%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil0.58%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands0.58%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.58%
FenEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Fen0.58%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.58%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil0.58%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.58%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.58%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.58%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.58%
Enrichment CultureEngineered → Lab Enrichment → Defined Media → Anaerobic Media → Unclassified → Enrichment Culture0.58%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001356Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007EnvironmentalOpen in IMG/M
3300003541Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 BulkEnvironmentalOpen in IMG/M
3300003998Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D2EnvironmentalOpen in IMG/M
3300004000Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_CattailNLB_D2EnvironmentalOpen in IMG/M
3300004002Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Muzzi_PWA_D2EnvironmentalOpen in IMG/M
3300004003Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Galinas_PWA_D1EnvironmentalOpen in IMG/M
3300004005Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Galinas_PWA_D2EnvironmentalOpen in IMG/M
3300004008Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Galinas_CordB_D2EnvironmentalOpen in IMG/M
3300004009Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D2EnvironmentalOpen in IMG/M
3300004012Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_ThreeSqC_D2EnvironmentalOpen in IMG/M
3300004014Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_CattailNLA_D2EnvironmentalOpen in IMG/M
3300004021Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Galinas_PWB_D1EnvironmentalOpen in IMG/M
3300004062Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D2EnvironmentalOpen in IMG/M
3300004071Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqB_D2EnvironmentalOpen in IMG/M
3300004074Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - White_ThreeSqA_D1EnvironmentalOpen in IMG/M
3300004077Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - White_ThreeSqC_D2EnvironmentalOpen in IMG/M
3300004266Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_ThreeSqA_D1EnvironmentalOpen in IMG/M
3300004633Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBioEnvironmentalOpen in IMG/M
3300005175Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122EnvironmentalOpen in IMG/M
3300005178Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137EnvironmentalOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005437Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005534Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1EnvironmentalOpen in IMG/M
3300005542Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1EnvironmentalOpen in IMG/M
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300005569Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154EnvironmentalOpen in IMG/M
3300005591Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1EnvironmentalOpen in IMG/M
3300006034Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105EnvironmentalOpen in IMG/M
3300006050Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014EnvironmentalOpen in IMG/M
3300006055Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012EnvironmentalOpen in IMG/M
3300006059Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012EnvironmentalOpen in IMG/M
3300006163Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaGEnvironmentalOpen in IMG/M
3300006174Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014EnvironmentalOpen in IMG/M
3300006224Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaGEnvironmentalOpen in IMG/M
3300006354Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012EnvironmentalOpen in IMG/M
3300009053Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015EnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009091Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300009101Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaGHost-AssociatedOpen in IMG/M
3300009111Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1EnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009167Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)EnvironmentalOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009506Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_8EnvironmentalOpen in IMG/M
3300009548Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_100EnvironmentalOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300009617Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_100EnvironmentalOpen in IMG/M
3300009631Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_100EnvironmentalOpen in IMG/M
3300009632Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40EnvironmentalOpen in IMG/M
3300009672Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaGEnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012350Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012931Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaGEnvironmentalOpen in IMG/M
3300012964Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaGEnvironmentalOpen in IMG/M
3300014151Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_60_metaGEnvironmentalOpen in IMG/M
3300014152Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_60_metaGEnvironmentalOpen in IMG/M
3300014153Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_60_metaGEnvironmentalOpen in IMG/M
3300014158Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaGEnvironmentalOpen in IMG/M
3300014272Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailB_D1EnvironmentalOpen in IMG/M
3300014498Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaGEnvironmentalOpen in IMG/M
3300014638Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaGEnvironmentalOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300016270Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080EnvironmentalOpen in IMG/M
3300016319Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00HEnvironmentalOpen in IMG/M
3300016387Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176EnvironmentalOpen in IMG/M
3300016404Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082EnvironmentalOpen in IMG/M
3300016422Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111EnvironmentalOpen in IMG/M
3300017931Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100EnvironmentalOpen in IMG/M
3300017995Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1EnvironmentalOpen in IMG/M
3300018018Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_150EnvironmentalOpen in IMG/M
3300018023Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100EnvironmentalOpen in IMG/M
3300018026Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_100EnvironmentalOpen in IMG/M
3300018086Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MGEnvironmentalOpen in IMG/M
3300019696Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? BRC_3-4_MGEnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300020583Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-MEnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300025446Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_100 (SPAdes)EnvironmentalOpen in IMG/M
3300025469Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_100 (SPAdes)EnvironmentalOpen in IMG/M
3300025555Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_ThreeSqB_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300025556Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragA_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025599Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Galinas_CordA_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025857Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-212 (SPAdes)EnvironmentalOpen in IMG/M
3300025898Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025905Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025906Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025911Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027045Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 40 (SPAdes)EnvironmentalOpen in IMG/M
3300027592Enrichment culture microbial communities from Arthur Kill intertidal strait, New Jersey, USA, that are MTBE-degrading - MTBE-AKS1 (Arthur Kill Sulfidogenic replicate 1) MetaG (SPAdes)EngineeredOpen in IMG/M
3300027877Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300027894Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)EnvironmentalOpen in IMG/M
3300027905Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)EnvironmentalOpen in IMG/M
3300027910Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)EnvironmentalOpen in IMG/M
3300027911Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)EnvironmentalOpen in IMG/M
3300029827Marine sediment microbial communities from Barataria Bay, New Orleans, USA to study impact of Deep Water Horizon explosion - M1047EnvironmentalOpen in IMG/M
3300029910III_Palsa_E2 coassemblyEnvironmentalOpen in IMG/M
3300030053Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_2EnvironmentalOpen in IMG/M
3300030494Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)EnvironmentalOpen in IMG/M
3300030524II_Palsa_N3 coassemblyEnvironmentalOpen in IMG/M
3300031525Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3EnvironmentalOpen in IMG/M
3300031565Soil microbial communities from Risofladan, Vaasa, Finland - UN-2EnvironmentalOpen in IMG/M
3300031566Soil microbial communities from Risofladan, Vaasa, Finland - UN-1EnvironmentalOpen in IMG/M
3300031572Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19EnvironmentalOpen in IMG/M
3300031573Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111EnvironmentalOpen in IMG/M
3300031669Soil microbial communities from Risofladan, Vaasa, Finland - TR-1EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031727Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5Host-AssociatedOpen in IMG/M
3300031728Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrCHost-AssociatedOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300031768Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22EnvironmentalOpen in IMG/M
3300031781Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20EnvironmentalOpen in IMG/M
3300031846Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19EnvironmentalOpen in IMG/M
3300031897Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300031941Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080EnvironmentalOpen in IMG/M
3300031945Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082EnvironmentalOpen in IMG/M
3300031947Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000HEnvironmentalOpen in IMG/M
3300031949Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197EnvironmentalOpen in IMG/M
3300031954Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)EnvironmentalOpen in IMG/M
3300032001Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)EnvironmentalOpen in IMG/M
3300032035Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170EnvironmentalOpen in IMG/M
3300032063Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17EnvironmentalOpen in IMG/M
3300032094Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25EnvironmentalOpen in IMG/M
3300032173Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_topEnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300032342Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G10_0EnvironmentalOpen in IMG/M
3300032401Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G03_0EnvironmentalOpen in IMG/M
3300032897Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5EnvironmentalOpen in IMG/M
3300033158Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1EnvironmentalOpen in IMG/M
3300033289Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108EnvironmentalOpen in IMG/M
3300033405Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MYEnvironmentalOpen in IMG/M
3300033412Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NCEnvironmentalOpen in IMG/M
3300033413Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_noCTEnvironmentalOpen in IMG/M
3300033414Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D4_BEnvironmentalOpen in IMG/M
3300033416Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D5_CEnvironmentalOpen in IMG/M
3300033419Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_noCTEnvironmentalOpen in IMG/M
3300033433Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MNEnvironmentalOpen in IMG/M
3300033475Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YCEnvironmentalOpen in IMG/M
3300033480Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_BEnvironmentalOpen in IMG/M
3300033513Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_CEnvironmentalOpen in IMG/M
3300033557Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_BEnvironmentalOpen in IMG/M
3300033804Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_0_20EnvironmentalOpen in IMG/M
3300033977Tropical peat soil microbial communities from peatlands in Loreto, Peru - SJ75EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12269J14319_1025581623300001356Peatlands SoilMTPEDFRHLRTVGLAPGSSIDYFGSFAEVRGTHYRGAYDGELFHILAAEVIKAVHRTSGDTQRLPRTNLDWRAVN
JGI20214J51650_1044459213300003541WetlandMAPEDVHHLRTVGRGGGGSTDDFGRLAKVGGAHNRRGYDAELCHILAAEVVETVHRATG
Ga0055472_1029990613300003998Natural And Restored WetlandsMTPKDVHHPCAVGRATGSGTDDFGSFAEVCGAHYRRGYDAELFHILTAEVIKAVHHATGDAQRLTRPNLDG
Ga0055458_1008408313300004000Natural And Restored WetlandsMTPKDIHHFRTIGRASAGGTDYFGSFAEVRGAHYRRGYDGELFYILATEIIEAVHRAAGDTQRLPWTNLNGRAVNRPGKDTLDTIEDLL
Ga0055477_1011522013300004002Natural And Restored WetlandsMTPEDLHHLRRIGRAALGSTDYFGRFAEVRGAHYRRGYDDELLYNLAAEVIEAVNRASG
Ga0055445_1029102813300004003Natural And Restored WetlandsMTPEDVHHLRTVGWTAGGGTHYFGSFAEVRWTHYRWGYDDELLHIFAAEVIETMHRAAGN
Ga0055448_1017392123300004005Natural And Restored WetlandsMTPEDIHHLRKIGRAAAGGTDYFGSFAEVRGAHYRRGYDGELFYILAAEVIEAVHRATGDTQRLPWTDLDGRAVNRPGKD
Ga0055446_1026969223300004008Natural And Restored WetlandsMRGFGYRHAMTPEDIHHLHRVGRAALGSTNYFGSFTEVRGAHYRRGYYDKLFYILAAEIIETVNCTSGDTQRLPWTHLDGLAVNRPGKDTLDTIENLLVGVIL
Ga0055437_1014293423300004009Natural And Restored WetlandsMTPEDFNHFRAVGRAAPGGTDYFGSFAEVRRTHYRRGYYDELFYIQGAEIFEAVYGTPGY
Ga0055464_1017033113300004012Natural And Restored WetlandsMRGRSQRHAMTPEDIHHLRRVGRAALGSTDNFGSFTEVRGAHYRRRYDDKLFYILAAEIIETVNRTSGDTQRLP*THLYGRAVNRPGKDTLDT
Ga0055456_1011373213300004014Natural And Restored WetlandsMTPEDIHHLHKIGRAAAGGTDDFGSFAEVRGAHYRRCYDGELFYILAAEVIEAVHRATGDTQRLPWTDLDGRAVNRPGKDTLDTIEDLLVGVIL
Ga0055449_1008856613300004021Natural And Restored WetlandsMTPEDLHHLRRIGRAALGSTDYFGRFAEVRGAHYRRGYDDELLYNLAAEVIEAVNRASGNAQRLPWTNLNGLTVNRPGKDT
Ga0055500_1014240913300004062Natural And Restored WetlandsMPPEYIHHLRAVGWAASGGIDYFGSFVEVRWAHHRWAYNDELFHILAAEVIEAV
Ga0055486_1016922813300004071Natural And Restored WetlandsMTPEDIHHFGTVGQAVLQSTDYFSGFAEVRGAHYRRGYNDELLYILAAEVIEAVNRASWNTQ
Ga0055518_1008730613300004074Natural And Restored WetlandsMRGCGQRHTMTPEDIHHLRKIGRAAAGGTDYFGSFAEVRGAHYRRGYDGELFYILGAEVIEAVHRATGDTQRLPWTDLDGRAVNRPGKDTLDTIEDL
Ga0055523_1011037723300004077Natural And Restored WetlandsMRGFGYRHAMTLEDIHHLHRVGRAALGSTDYFGSFTEVRWTHYRRGYDDKLFYILAAEI
Ga0055457_1010227613300004266Natural And Restored WetlandsMTPKDIHHFRTIGRASAGGTDYFGSFAEVRGAHYRRCYDGELFYILAAEVIEAVHRATGDTQRLPWTDLDGRAVNRPGKDTLDTIEDLLVGVILVGRRC
Ga0066395_1013412333300004633Tropical Forest SoilMRGRGQRHAMTAEDIHHFRAIGHCTCGGVDYFGGFSEIRGAHVRRGYDGELLHILGAEIVEAVHRASGDAQRLPGTNLDGRAV
Ga0066673_1035629913300005175SoilLPSPSRLTQFSPQLAIGLRGRGQRPAMTAEDVHGGSPAAASIFGGLAEVRGPHDRRRYDGELFHILVAKIVEAVHRASGDAQRLPGTNRDGRAVNRPGKDA
Ga0066688_1078217633300005178SoilHPRAVGRAAGGGTDYFGSFVEVRGAHYRRGYDGELLHILAAEVIEAVHCASRYAQRRRLGQR*
Ga0068869_10110459113300005334Miscanthus RhizosphereMTAEDVHHFRAIRRAAGGCGDYFGGFSEVCGAHYRWGYDGELFHILVSEIIEAVHRASG
Ga0070710_1023370543300005437Corn, Switchgrass And Miscanthus RhizosphereMTAEDINHFRAIGRAAGGGDYFGGFSEVCGAHYRRGYDGELFHILVAEIIEAVHRASGDAQRLPGTNLDGRAVNRPGKDALNTVE
Ga0070708_10020117013300005445Corn, Switchgrass And Miscanthus RhizosphereMTPEDVHHFRAIGRAAARGCDYFGGFPEVRAAHYRRGYDGELLRILVAEIIEAVHRSSGDAQRLPGTNLDGRAVN
Ga0070735_1012558013300005534Surface SoilMFTEDVHHFRAVGWAAGGGNDDRGSFTEVRGAHYRRGYKGELFRIMVAEVIEAVHRASGN
Ga0070732_1042749023300005542Surface SoilMTAEDVHHFRAIGRAAGGCGDYFGGFSEVCGDHYRRGYDGELFHILVAEIIEAVHRASGD
Ga0070672_10185600223300005543Miscanthus RhizosphereMTAEDVHHFRAIGRAAGGGVDYFGGFSEVRRAHNRRGYDDELFHTLVAESIEAVYRASGDAQHMPGTNLDGRAVNRPGKD
Ga0066705_1094419013300005569SoilMTPEDVHHPRAVGRAAGGGTDYFGSFAEVRGAHYRRGYDGELFHILAGEVIEAVHRASGDAQRLPGTNLDGRAVNRPGKDALDTV
Ga0070761_1009044033300005591SoilMTPEDVHHLRAVGRAADGGIDYFGSFPEVRGAHYRRGYDGKLFHILAAEVIEAVHCASGDAQRLPGTNLDGRAVNR
Ga0066656_1047773123300006034SoilMTAEDINHFRAIGRAAGGGGDYFGSFSEVCGAHYRRGYDGELFHILVAEIIEAVHRASGDAQRLPGTNLDGR
Ga0075028_10032630823300006050WatershedsMTVEDIHHFFAIGRATGAGVDYFSRFSEVRGAHYGRGYDSELFHILVSQIIEAMNRASGDA*
Ga0097691_102053813300006055Arctic Peat SoilMTAEDVHHFRGIGRAAGGGGDYLGGFSEVRGAHYRRGYDGELFHILTAEIIEAVHRASGDAQCLPGTNLDGLAVNRPGKDALDTV
Ga0075017_10064353413300006059WatershedsVKLKQTGPLLNRRGRGQRHAMTPEDVHHFRAIGRAAGGVADYFGGFSEVRGAHYRRGYDGELFHILLAEIVEAVHRASGDAQR
Ga0070715_1020093933300006163Corn, Switchgrass And Miscanthus RhizosphereMTAEDINHFRAIGRAAGGGDYFGGFSEVCGAHYRRGYDGELFHILVAEIIEAVHRASGDA
Ga0075014_10053928113300006174WatershedsMTAEDVHQFRAIGRAAGGGGDYFGGFSEVRGTHYRGRDDGELFHIFVAEIIEAVHRASGDAQRLPGTNLDGRTVNRPGKD
Ga0079037_10228008713300006224Freshwater WetlandsMTPEDVHHLRAVGRAASGSTDYFGSFPEVRGAYYRRGYDGELFHILAAEVIEAVH
Ga0075021_1010240813300006354WatershedsMTVEDVHHFRAIGRATASGVYYFGSFSEVRGAHYRGGYDGELLYILVAEIIEAVHRATGDAQRLPGTNLDRRAVDRPGKDALDTVEDLLIGIVLVG
Ga0105095_1008028243300009053Freshwater SedimentMTPEDLHHLRAVGRAGGVIDYFGSFAEVRGAHYRRGYDGELFRILAAEIVEAVHRASGDAQCLPGTNLNRFAINRPGEDALD
Ga0099828_1201301013300009089Vadose Zone SoilMTAEDVHHFRAIGRAAGGVVDYFGGFSEVRGAHYRRGYDGELFHILVAEIIEAVHHASGDTQRLPGSNLDGRVVNRPGKDALD
Ga0102851_1328916623300009091Freshwater WetlandsMTPENLHHLRAVGRATTGGIDYFGSFAEVRGAHDRRGYDGELFHILVAEVVEAVHRASGNTQRLPGTNLDRLAINRP
Ga0105247_1173072913300009101Switchgrass RhizosphereMTAEDADHFRAIGRAAGGCSDYFGGFSEVGGAHYRRGYDGELFHILVAEIIEAVHRASGDAQRLPGTNLDRRAV
Ga0115026_1004679533300009111WetlandMTPEDVYHLRAVGWATGGGTDYFCSFAEVRGTHYRRGYDGELFHILAAQVIEAVHRAAGDAQRLPGTNL
Ga0115026_1068095713300009111WetlandMTPENVHHLRAVGWAASGGTNDFGRFAKVCGAHYRRGYDGELYHILVAEVFETVNRASGDAQRLPGTNLDGRAVNR
Ga0066709_10165575213300009137Grasslands SoilMTPKDFHHLHPVGRASLGGTDYLGSFAEVRGTHYGRADNGELFHILAAEIIEVMYRASGDAQHLPGTNLDRRAVDRPGK
Ga0113563_1014639133300009167Freshwater WetlandsMTPEDVYHLRAVGWATGGGTDYFCSFAEVRGTHYRRGDDAELFRILAAEVVEAMGRAARDAQRLAG
Ga0105242_1155957623300009176Miscanthus RhizosphereMTAEDINHFRAIGRAAASGVYYFGSFSEVRGAHYRGGYNGELLYVLVAEIIEAVHRATGDAQR
Ga0118657_1096604813300009506Mangrove SedimentMGGRGQRHAMTPEDIRHLHRVGRATLGSTDYFGSFSEVCGAHYRRRYDDKLFYIFAAEIIETVNRTSGDTQCLPWTHLDGRAVNRPSKDTLDT
Ga0116107_114020923300009548PeatlandMTPEDVHHLRAVGRAGGGTDYFGSFAEVRGAHYCRGYDGELFHILAAEVIEAVHRA
Ga0105238_1173505623300009551Corn RhizosphereMTAEDINHFRAIGRAAGGGDYFGGFSEVCGAHYRRGYDGELFHILVAEIIEAVHRASGDAQRLPGTNLD
Ga0116123_104396223300009617PeatlandMTPEDVHHLRAVGRAGGGTDYFGSFAEVRGAHYRRGYDGELFHILAAEVIEAVHCASGDAQRLPGTNLDGRAVNRPGKDTLD
Ga0116115_119911813300009631PeatlandMTPEDVHHLRTVGRAGGGGTDYFGSFAEVRGAHYRRGYDGELFHILAAEVIEAVH
Ga0116102_114601913300009632PeatlandVSLENLCHLRAVGRTAGRGANHFGSFAEVRGTHYRRGYDGELFYIHATEIIESVYR
Ga0116215_154315213300009672Peatlands SoilMTAEDVHHFRAIGRAAGGGVDYFGGFSEVRGAHYRRGYDGELFHILVAEIIEAVHRASGDAQRLPGTNLDGRAVNRPGKH
Ga0126378_1031621213300010361Tropical Forest SoilMTPEDLHHLRAVGRAAAGGTDYFSRFAEVRGTHYRRAYDGELFRIRAAEVIKAVRRASGDAYRLAGTDLNGRAVNRPGKDALD
Ga0126379_1213465013300010366Tropical Forest SoilMTPEDVHHLCAVGWTASSSTDYFGSLAEVLGTHDRRRNYAELFHILAAEVIEAVRRATGYAQSLPRTNLDG
Ga0105239_1197804423300010375Corn RhizosphereMTVEDFHHFRAIGRATASGVYYFGSFSEVRGAHYRGGYDGQLLYILVAEIIEAVHRATGDAQRLPGTNLDRRAVDRPGKDA
Ga0136449_10331285623300010379Peatlands SoilMTAEDVHHFRAIWRAAGGGVDYFGGFSEVRGAHDRRGYDGELFRILIAEIIEAVHRASGDAQRLPGTNLDGRAVNRPGKDALDTIEDL
Ga0134124_1175221513300010397Terrestrial SoilMTAEDINHFRAIGRAAAGGVYYFGSFSEVRGAHYRRGYDGELLRILVAEIIEAVHRASGDAQRLPGTNLDGRAVNRPGKDTLD
Ga0137364_1038110723300012198Vadose Zone SoilMTPEDVHHFRAIGRATASGVYYYGSFSEVRGAHYRGGYYGELPHILVAEIIEAVHRATRD
Ga0137382_1066939713300012200Vadose Zone SoilMTAEDVRHSRAIGRAAGGCGDYFGGFSEVRGTHYRGRDDGELFHIFVAEIIEAVHRTS
Ga0137372_1004217313300012350Vadose Zone SoilMTPEDVHHLRAIGRAAASGTDYFCRLAEVCGAHYGRGYDGELFHILAAEVVEAMYRASGDA*
Ga0137385_1123204523300012359Vadose Zone SoilMTAEDVHHFRVIGRATGGGCDYFGGLSEVRRTHYRRGYDGELLHVLVAEIIEAVHRASGDAQRLPGTNLDGRAVQSR*
Ga0153915_1081575413300012931Freshwater WetlandsMTPEDVHHLRAVGRAAAGGTDDFGSFAEVRGAHYRRGYDGELFHILAAEVIEAVHRASIGG*
Ga0153915_1160386123300012931Freshwater WetlandsMTPEDIHHLRAVGWAAAGGTDYFGSFAEVRGAHYRRGYDGELFHILAAEVVEAVHRASGDAQ
Ga0153915_1206214223300012931Freshwater WetlandsMTPEDVHHLRTVGRPAAGGTDYFGCFAEVRGAHYRRGYDGELFHILGTEVIEAVHRTSRD
Ga0153915_1271737713300012931Freshwater WetlandsMTAEDVRHLRTGGWAAGGGTDSFSSFAEVGGAHYRRGSDGELFHILAAEVIEAVHRTSG
Ga0153916_1198714823300012964Freshwater WetlandsMTPEDVHHLRAVGRAAGGGTDYFGSFAEVRGAHYRRSYDGKLFHILAAEVVEAVHRASGDAQGLPGT
Ga0181539_128752913300014151BogMTPKDVHHLRAVGRAAGGGTDYFSGFAEVRGAHYRRGYDGELFHILAAEVIEAVHRASGDAQRLPGTNLDG
Ga0181539_136805013300014151BogMTPEDVHYLRAVGRAAGSGTDYFGSFAEVRGAHYCRGYDGELFHILAAEVIEAVHRASGDAQRLPGTNL
Ga0181533_105563433300014152BogMTPKDVHHLRAVGRAAGGGTDYFSGFAEVRGAHYRRGYDGELFHILAAEVIEAVHRASGDAQRLPGTN
Ga0181527_102964333300014153BogMAPEDVHHLRAVGRAAGGGSDYFGSFAEVRGAHYRRGYDGELFHILAAEVIEAVHRASGDAQRLPGTNLDGRAVN
Ga0181521_1039048013300014158BogMTPEDFHHFRTVGRPVGGGTDYFGSFTEVRGAHYRRGYDGELFRINAAEVIEAVHRTSGDAQRLPRANLNGRSV
Ga0075327_122729313300014272Natural And Restored WetlandsMTVENLHHLPAIGRATGGGIDYFGSFAEVRGAHYRGGYDGELFHILAAEVVEAVDRASGDAKCLPGTDLDGLAVNRPSKDALDTVE
Ga0182019_1024144433300014498FenMTAEDVDHFRAIGRATASGVYYFGSFSEVRGAHYRRGYDGELFHMLAAEIIEAVHRASRDAQSLPRTNIDGRAVNSPGKNTLNTVK
Ga0181536_1045996513300014638BogMAPEDVHHLRAVGRAAGGGSDYFGSFAEVRGAHYRRGYDGELFHILAAEVIEAVHRASGDAQRLPGTNL
Ga0132257_10256362823300015373Arabidopsis RhizosphereMTPEDIHHLCAVGGAAGGRADYFGSFAEVRGAHYRRGYDDELFHILVAEVIEALH
Ga0182036_1136085113300016270SoilMWGRGQRHAMTAEDVHHFRAIGQCTCGGVDYFGGFSEISGAHVRRGYDGELLHILGAEIVEAVHRASGDAQSLPGTN
Ga0182033_1053102223300016319SoilMWGRGQRHAMTAEDVHHFRAIGQCTCGGVDYFGGFSEISGAHVRRGYDGELLHILGAEIVEAVHRASGDAQRLPGTNLDGRA
Ga0182040_1174994413300016387SoilMLMARTAEDACHLRAVRRAAAGGTDDFGGFAEVRRAHHRGAYDSELFHIHAAELIKSGGPRL
Ga0182037_1039180113300016404SoilMRGRGQRHAMTAEDVHHFRAIGHCTYGGVDYFGGFSEIRGAHVRRGYDGELLHILGAKIVEAVHRASGDAQRLPGTNLDGRAVNR
Ga0182039_1047219813300016422SoilMRGRGQRHAMTAEDVHHFRAIGHCTYGGVDYFGGFSEIRGAHVRRGYDGELLHILGAEIVEAVHRAS
Ga0187877_116096313300017931PeatlandMTPEDVHHLRAVGRAGGGTDYFGSFAEVRGAHYCRGYDGELFHILAAEVIEAVHRAAGDAQRLPGTN
Ga0187816_1033890813300017995Freshwater SedimentMTAEDLRHFRAIGQTASRGGDHFGSFPEVRGAHYRRGYDRELFHILVAKIIEAVHRAPG
Ga0187886_111812623300018018PeatlandMTPEDVHHLRAVGRAGGGTDYFGSFAEVRGAHYCRGYDGELFHILAAEVIEAV
Ga0187889_1012864723300018023PeatlandMTPEDVHHLRAVGRAGGGTDYFGSFAEVRGAHYCRGYDGELFHILAAEVIEAVHRAA
Ga0187889_1024237923300018023PeatlandMTPEDVHHLRAVGRAAGSGTDYFGSFAEVRGAHYCRGYDGELFHILAAEVIEAVHRAA
Ga0187857_1023905823300018026PeatlandMTPEDVHHLRAVGRAGGGTDYFGSFAEVRGAHYCRGYDGELFHILAAEVIEAVHRAAGDA
Ga0187769_1052508523300018086Tropical PeatlandMTPEDVHHFRAIDRAGGGADYLGSFAEVRGAHYRRAYDGELFRILAAEVIEAMHGASGDTQRLPGTNLDRRAIHRPGKDALYTVEDLLVGVVLVGR
Ga0194017_102350313300019696SedimentMRGRGQRHAMTPEDIHHFRTVGQGVLPSTDYFSGFAEVRGAHYRRGYDYELLYILAAEVIEAVNRASWN
Ga0210407_1046209513300020579SoilMTAEDFHHFRPIGRAADGGVDYFGGFSEVRGAHYRRGYDGELFHILVAEIIEAVHRASGDAQRLPGTNLDGRAVNRPGKDALDAVEDL
Ga0210401_1049211013300020583SoilMTAEDFHHFRPIGRAADGGVDYFGGFSEVRGAHYRRGYDGELFHILVAEIIEAVHRASGDAQRLPGTNLDGRAVNGPGKDALDTVEDLLVG
Ga0210402_1164812123300021478SoilMTAEDVHHFCAIGWAAGGVADYFGGFSEVRRAHYRWGYDGELFHILVAEIVEAVHRASGNTQR
Ga0210410_1125445613300021479SoilMTPEDLHHFRAIGRPAGGGTDYFGSFTEVRWAHYRRGYDGELFRIIAAEVIESVHRTSGDAQRLPGANLDRRSVNGPGKDA
Ga0210409_1146527613300021559SoilMRGRGQRHAMTTEDVHHCRAIGRAAGRSVDYFGGLAEVRGPHDRRGYDGELFHILVAKIVEAVHRASGDAQRLPGTNLDGRAV
Ga0126371_1249869323300021560Tropical Forest SoilMTAEDVHHFCPIRCAAGGRVYCLRSLAEVRRPHDRRGYDGELFHILVAEIVEAVHRTSGDTQRLPWT
Ga0208038_102718923300025446PeatlandMTPEDVHHLRAVGRAGGGTDYFGSFAEVRGAHYCRGYDGELFHILAAEVIEAVHR
Ga0208687_105830713300025469PeatlandMTPEDVHHLRAVGRAGGGTDYFGSFAEVRGAHYCRGYDGELFHILAAEVIEAVHRAAGDAQRLPGTNL
Ga0210121_108436813300025555Natural And Restored WetlandsMRGCGQRHAMTPKDIHHFRTIGRAAAGGTDYFGSFAEVRGAHYRRGYDGELFYILAAEIIEAVHRAAGDTQRLPWTDLDGRAVNRPGKDTLDTIEDLLVGVI
Ga0210120_112283623300025556Natural And Restored WetlandsMTPEDIQHLRTIGRAAAGGTDDFGSFAEVRGAHYRRGYDGELFYILAAEVIEAVHRATGDTQRLSWADLDG
Ga0210074_101144033300025599Natural And Restored WetlandsMRRRGQCHAMTPEDIHHLRRVGRAALGSTDYFGSFTEVRWAHYRRGYDDELFYILAAEV
Ga0209014_1013401023300025857Arctic Peat SoilMTAEDVHHFRGIGRAAGGGGDYLGGFSEVRGAHYRRGYDGELFHILTAEIIEAVHRA
Ga0207692_1075293823300025898Corn, Switchgrass And Miscanthus RhizosphereMTPEDVHHFCAIGRAAARGCDYFGGFPEVRGAHYRRGYDGELLRILVAEIIEAVHRSPGDAQRLPGTNLDGRAVNRPGKDTLD
Ga0207692_1102659223300025898Corn, Switchgrass And Miscanthus RhizosphereMTAEDINHFRAIGRAAGGGDYFGGFSEVCGAHYRRGYDGELFHILVAEIIEAVHRASGDAQRLPGTNLDGRAVNRPGKDALNTVEY
Ga0207685_1018664313300025905Corn, Switchgrass And Miscanthus RhizosphereMTAEDINHFRAIGRAAGGGDYFGGFSEVCGAHYRRGYDGELFHILVAEIIEAVHRASGDAQRL
Ga0207699_1033076623300025906Corn, Switchgrass And Miscanthus RhizosphereMTPEDVHHFCAIGRAAARGCDYFGGFPEVRRAHYRRGYDGELLRILVAEIIEAVHRSP
Ga0207684_1105899313300025910Corn, Switchgrass And Miscanthus RhizosphereMTTEDVDHFRAIRRTTDGIGDYFGGFSEIGWPHYRGGYDSELFHILVTEIVEAVRCASGD
Ga0207654_1136107513300025911Corn RhizosphereMTAEDINHFRAIGRAAGGGDYFGGFSEVCGAHYRRGYDGELFHILVAEIIEAVHRASGDAQRLPGTNLDRRAVNRPGKDALNTV
Ga0207665_1135307323300025939Corn, Switchgrass And Miscanthus RhizosphereMTPEDVHHFRAIGRVTASGVYYFGSFSEVRGAHYRGGYDGELLYILVAEIIEAVHRATGDAQRLPGTNLDR
Ga0207677_1099631213300026023Miscanthus RhizosphereMTAEDVHHFRAIRRAAGGCGDYFGGFSEVCGAHYRWGYDGELFHILVSEIIEAVHRASGDAQRLPRTNLEGRAVNRPGKDTLD
Ga0207726_100371643300027045Tropical Forest SoilMTPEDVHHFRAIGRASCRGINYFGGFAEIRGPHNRRGYDGELFHILVAEIVKAVDRASGDAQRLP
Ga0209270_116475513300027592Enrichment CultureMRGSGHRHAMAPEDIHHLRAVRRTVGGSSDYFGSFAEVGRAHYRRGYYDELFYILAAEVIEAVNRASGDTQRLPWTNLDGR
Ga0209293_1039235513300027877WetlandVTPEDLHHPCTVGRATGGGADDFGGFAEVRGAHDRRGYDDELFHILAAEVVEAVHRASGDAQRLPGTNLDGLAINRPGEDALDTVEGVSS
Ga0209068_1006214023300027894WatershedsMTVEDVHHFRAIGRATASGVYYFGSFSEVRGAHYRGGYDGELLYILVAEIIEAVHRATGDAQRLPGTNLDRRAVDRPGKDALDTVEDLLIGIVL
Ga0209415_1105448413300027905Peatlands SoilMTAEDVHHFRAIGRAAGGGVDYFGGFSEVRGAHYRRGYDGELFHILVAEIIEAVHRASGDAQRLPGTNLDGRAVN
Ga0209583_1079482813300027910WatershedsMTAEDVHHFRAIGRAAGGGGDYFGGFSEVRGAHYRRGYDGELFHILVAEIIEAVHGASGDAQRLPG
Ga0209698_1102405713300027911WatershedsMRGRGQRHAMTAEDVHHFRAIGRAAGGSVDYFGGLAEVRGPHDRRGYDSELFHILVAKIVEAVHRAAGDA
Ga0134606_1001312613300029827Marine SedimentMRGRGYRHTMTPEDIHHLNWVGRAALGSTDYFGRFTEVRGAHYCRGYDDQLFYILAAEIIETVNRTSGDTQRLPWTHLDGLAVNRPGKDTLDTIV
Ga0311369_1004203413300029910PalsaMTPEDVHHLRAVGLAADGGTDYFGSFAEVRGVHYRRGYNGKLFHILAAEVIEAVHRASGDAQRLPGTNLDGRAVNR
Ga0302177_1011122033300030053PalsaMTPEDVHHLRAVGLAADGGTDYFGSFAEVRGVHYRRGYNGKLFHILAAEVIEAVH
Ga0310037_1036133913300030494Peatlands SoilMTAEDVHHFRAIGRAAGGGVDYFGGFSEVRGAHYRRGYDGELFHILVAEIIEAVHRASGDAQRLPGTNLE
Ga0311357_1004002513300030524PalsaMTPEDVHHLRAVGLAADGGTDYFGSFAEVRGVHYRRGYNGKLFHILAAEVIEAVHRASGDAQRLPGTNLDGRAVNRPGKKSL
Ga0302326_1329612413300031525PalsaMTAEDVHHFRAIGRPAGSGVDYFGGFSEERGAHYRRGYDGELFHIFVAEIIEAVHRASGDAKRLPGTNL
Ga0307379_1075761123300031565SoilMTPEDLHQLRAVGRTTGGGIDYFGSFAEVRGAHDRRGYDGELFHILAAEVVEAVHRASWDAQCLPGTNLDRLAINRPGKDA
Ga0307378_1079286923300031566SoilMTPEDLHQLRAVGRTTGGGIDYFGSFAEVRGAHDRRGYDGELFHILAAEVVEAVHRASWD
Ga0318515_1047376113300031572SoilMRGRGQRHAMTAEDVHHFRAIGHCTYGGVDYFGGFSEIRGAHVRRGYDGELLHILGAEIVEAVHRASGDAQRLPGTNLDGRAVNRPGKDALDTI
Ga0310915_1027606713300031573SoilMRGRGQRHAMTAEDVHHFRAIGHCTYGGVDYFGGFSEIRGAHVRRGYDGELLHILGAEIVEAVHRASGDAQRLPGTNLDGRAVNRPGKDARDTVEDLLEGIV
Ga0307375_1013890523300031669SoilMTPEDLHQLRAVGRTTGGGIDCFGSFAEVRGAHDRRGYDGELFHILTAEVVEAVHRASWD
Ga0307469_1250740813300031720Hardwood Forest SoilMTPKDVHHLRAVGRAAGGDADYFGSFAEVRGTHYRRGYGLAGEVIEAVHRASGDAQRRPGTNLDGVPSTVQVGTPSIP
Ga0316576_1014317513300031727RhizosphereMRGCSYRHAMTPEDIHHLHRVGRAALGSTDYFGSFTEVRGAHYRRGYDDKLFYILAAEIIETVNRTSGDTQRLPWTHLDGRAVNRPGKDTHDTIKDLLVGVILV
Ga0316578_1065278723300031728RhizosphereMTPEDIHHFRTVGQAVLPSIDYFSGFAEVRGAHYRRGYDYELLYILAAEVIEAVNRAS
Ga0307475_1095674013300031754Hardwood Forest SoilMTAEDFHHFRPIGRAADGGVDYFGGFSEVRGAHYRRGYDGELFHILVAEIIEAVHRASGDAQRLPGTNLDRRAVNGPGKDALDTVED
Ga0318509_1021220913300031768SoilMRGRGQRHAMTAEDVHHFRAIGHCTYGGVDYFGGFSEIRGAHVRRGYDGELLHILGAEIVEAVHRASGDAQRLPGTNLDGRAVNRPGKDALDTIE
Ga0318547_1085318313300031781SoilMTAEDLHHFRSVRWAASGGIDCLSRFLEVCGAHYRRGYDGELFHILIAEIIEAMYRAARDAQGLPGANLDGLAVDRPGKDALD
Ga0318512_1018283423300031846SoilMTPEDVHHLRAVGRAAVGGTDYFGGFAEVRGAHYRRPYDGELSHIRAAEVIKAVHRASGDAQRLAG
Ga0318520_1092079313300031897SoilMTSEDVHHLRALGRAAAGSTDYLGSFAEERRAHYRRAYDGELFHIRAAEVVKAVHRTSGDAQGRPG
Ga0306921_1015731733300031912SoilMTAEDVRHFRSVRWATTVSGVDYRGSFSEVCGAHYRRRYDGELFHILMAEIIEAMYWGWWNAQRLPRTNLDGRAVN
Ga0310912_1068028813300031941SoilMTAEDVHHFCPIRRAACGRVDFLRSLAEVRGPHDRRGYDGELFHILVAEIVEAVHRSSGDTQRLPWTNLDG
Ga0310913_1079553723300031945SoilMTMEDVRHFRSIGRATGGGVDYFGGFSEVRGAHHRGGYDGELLRIAVAEIIEAVHRASGNAQRLPGTNFDGRAVNRPGKDAF
Ga0310909_1036201933300031947SoilMWGRGQRHAMTAEDVHHFRAIGQCTCGGVDYFGGFSEISGAHVRRGYDGELLHILGAEIVEAVHRASGDAQRL
Ga0310909_1101416923300031947SoilMTSEDVHHFCAVGWAASSSTDYFGSLAEVRGTHDRRRNYAELFHILAAEVIEAVRRATGYAQ
Ga0214473_1194910413300031949SoilMTPEDLHHLRAVGRAGGGIDYFGSFAEVRGAHYRRGYDGELFHILAAEIVEAV
Ga0306926_1034779733300031954SoilMTAEDVRHFRSVRWATTVSGVDYRGSFSEVCGAHYRRRYDGELFHILMAEIIEAMYCASWNAQRLPRTNLDGRAVNRPSKDAFYAVKDFLVGIVLVG
Ga0306926_1125310913300031954SoilMTPEDVHHLRAVWRAAGGTDYFGSFAEVRRAHYRRGYDSERFRILAAEVIEA
Ga0306922_1061137833300032001SoilMTAEDVHHFCPIRRAACGRVDFLRSLAEVRGPHDRRGYDGELFHILVAEIVEAVHRSSGDTQRLPWTNLDGRAVNRPGKDAFDTIEDFLVGIVLVGRR
Ga0306922_1093416713300032001SoilMTAEDVRHFRSVRWATTVSGVDYRGSFSEVCGAHYRRRYDGELFHILMAE
Ga0310911_1052922623300032035SoilMRGRGQRHAMTAEDVHHFRAIGHCTYGGVDYFGGFSEIRGAHVRRGYDGELLHILGAEIVEAVHRASGDAQRLPGTNLDGRAVNRPGKDALDTIEDLL
Ga0318504_1061283913300032063SoilMTSEDVHHFCAVGWAASSSTDYFGSLAEVRGTHDRRRNYAELFHILAAEVIEAVRRATGYAQSLPGTNFDGCAVNRPCK
Ga0318540_1066117113300032094SoilMTAEDLHHFRSVRWAASGGIDCLSRFLEVCGAHYRRGYDGELFHILIAEIIEAMY
Ga0315268_1113527213300032173SedimentMTPEDVHHPYAVGWAASGCTDDFGSFTEVCGAHDRRGYDSELLHILAAEVIEAMHRAAGDAQRLAGTNLEGRAVNHP
Ga0307471_10283199923300032180Hardwood Forest SoilMTPEDVHHFRAIGRAAARGCDYFGGFPEVRGAHYRRGYDGELLRILVAEIIEAVHRSSGDAQRLPGTNLDGRAVNR
Ga0306920_10078592313300032261SoilMTAEDVHHFCPIRRAACGRVDFLRSLAEVRGPHDRRGYDGELFHILVAEIVEAVHRS
Ga0315286_1015266943300032342SedimentMTPENLHHLLAVGRATGGGTDYFGSFAEVRGAHDRRSYDGELFHILAAEVVEAVHRASGDAQCLPGTNLDGRAINRPV
Ga0315275_1261615913300032401SedimentLLSRRGCGHRHAMTPENLHHLLAVGRATGGGTDYFGSFAEVRGAHDRRSYDGELFHILAAEVVEAVHRASGDAQCLPGTNLDGRAINRPV
Ga0335071_1098201123300032897SoilMPPEDLHHLCAVGRAASGGTDYIGRFAEVRGTHDCRGDDAELFHILTAEVIKAISRAQRASWND
Ga0335077_1106390023300033158SoilGRGHRHAMTPEDVHHLRAVGRAAGGGTDYFGSFAEVRGAHYRGAYDGELFHILAAEVSCL
Ga0310914_1106720123300033289SoilMTAEDVHHFCPIRRAACGRVDFLRSLAEVRGPHDRRGYDGELFHILVAEIVEAVHRSSGDTQRLPWTNLDGRAVNRPGKD
Ga0326727_1001531913300033405Peat SoilMTPEDVHHFRAVGRSAGSGTDYFGSFAEVRGAHYRRGYDGELFHILAAKVVEAVHRASGDAQR
Ga0326727_1076528423300033405Peat SoilMTPEDLRHLRAVGRAGGSTDGLGRFAEIRRTHDRRADEAELFHILAAEVIEPVNGAPGDAQRLPGTNLDGRAINR
Ga0310810_1069601813300033412SoilMTAEDINHFRAIGRAAAGGVYYFGSFSEVRGAHYRRGYDGELLRILVAEIIEAVHRASGDAQRLPGTNLDGRAVNRPGKDALNTVEYL
Ga0316603_1052266933300033413SoilMTPEDVHHLRAVGRAASGSTDYFGSFPEVRGAYYRRGYDGELFHILAAEVIEAVHRAAGDAQSLP
Ga0316619_1062286223300033414SoilLGRLTTLSRRGLGHRHAMTPEDVYHLRAVGRAASGGTDYFGSFPEVRGAHYRRGYDGELFHILAAEVIEAVHRASGDAQRLPGTNLDGRAVNRPGKDALD
Ga0316622_10069357823300033416SoilMTPENVHHLRAVGWAASGGTNDFGRFAKVCGAHYRRGYDGELYHILVAEVFETVNRASGDAQRLPGTNLDGRAVNRPGKDALDT
Ga0316601_10161404423300033419SoilMTPEDVHHPCTVGRATGGGADDFGGFAEVRGAHDRRGYDDELFHILAAEVVEAV
Ga0326726_1028992113300033433Peat SoilMTPEDVHHLRAVGRAAGSTDYFGSFAEVRGAHYRRGYDGELFHILVAEVIEAVHRASGDAQRLPGTN
Ga0310811_1124785913300033475SoilMTAEDINHFRAIGRAAASGVYYFGSFSEVRGAHYRGGYNGELLYVLVAEIIEAVHRATGDAQRLPGTNLDR
Ga0316620_1243163613300033480SoilMTAEDVHHFRAIGRAAGGGVDYFGGLPEVRGAHYRRGYDGELFHILVAEIIEAVHRASGDAQRLPGTN
Ga0316628_10055579113300033513SoilMTPEDIRHLRAVGWAAGGGIDYFGSFAEVRRAHYRRGYDGELFHILAAEIIEAVHRASG
Ga0316628_10117107433300033513SoilPEDIHHLCPVGRAGGGGPDDFGRFAEVRGTHDRRGDDAELFHILAAEVIEAMGRAQRASWND
Ga0316628_10347982823300033513SoilMTPEDVHHLRAVGRTAAGGTDYFRRFTEIRGAHYRRGYDGELFHILAAEVVETMRRASRD
Ga0316617_10118726013300033557SoilMTAEDVHHFRAIGRAAAGGGDYFGGFSEVRGAHYRRGYDGELFHILVAKIIEAVHRASGDAQRLPG
Ga0314863_081412_2_1663300033804PeatlandMTPEDLHHLRAVGWASGGGTYYFGSFAEVRWSHYRRGNDGELFHILAAEVIETVH
Ga0314861_0006476_7027_71973300033977PeatlandMTPEDLHHLRAIGRAGGGTDYFRSFAEVRGAHYRRGYDGELFHILAAGVIEAVDRA

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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