Metagenome / Metatranscriptome Family F036193

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F036193
Family Type	Metagenome / Metatranscriptome
Number of Sequences	170
Average Sequence Length	67 residues
Representative Sequence	MAVIGVIAVLLIVLVWFLWPSKDAGPARRERPDVDAAELEAAERDVQEAADEESVRDWGPGSGQKPLP
Number of Associated Samples	125
Number of Associated Scaffolds	170

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.94 %
% of genes near scaffold ends (potentially truncated)	20.00 %
% of genes from short scaffolds (< 2000 bps)	74.71 %
Associated GOLD sequencing projects	107
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.32

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (81.176 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (47.647 % of family members)
Environment Ontology (ENVO)	Unclassified (42.941 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (57.059 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 37.50% β-sheet: 0.00% Coil/Unstructured: 62.50%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.32
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.32
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 170 Family Scaffolds
PF07831	PYNP_C	37.65
PF01751	Toprim	30.59
PF00986	DNA_gyraseB_C	16.47
PF02518	HATPase_c	4.71
PF14559	TPR_19	1.76
PF13432	TPR_16	1.18
PF00557	Peptidase_M24	1.18
PF14520	HHH_5	0.59
PF01008	IF-2B	0.59
PF01523	PmbA_TldD	0.59
PF00378	ECH_1	0.59
PF05258	DciA	0.59
PF00005	ABC_tran	0.59
PF02830	V4R	0.59

COG ID	Name	Functional Category	% Frequency in 170 Family Scaffolds
COG0213	Thymidine phosphorylase	Nucleotide transport and metabolism [F]	37.65
COG0187	DNA gyrase/topoisomerase IV, subunit B	Replication, recombination and repair [L]	16.47
COG0182	5-methylthioribose/5-deoxyribulose 1-phosphate isomerase (methionine salvage pathway), a paralog of eIF-2B alpha subunit	Amino acid transport and metabolism [E]	0.59
COG0312	Zn-dependent protease PmbA/TldA or its inactivated homolog	General function prediction only [R]	0.59
COG1184	Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family	Translation, ribosomal structure and biogenesis [J]	0.59
COG1719	Predicted hydrocarbon binding protein, contains 4VR domain	General function prediction only [R]	0.59
COG5512	Predicted nucleic acid-binding protein, contains Zn-ribbon domain (includes truncated derivatives)	General function prediction only [R]	0.59

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	81.18 %
Unclassified	root	N/A	18.82 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	81.18 %
Unclassified	root	N/A	18.82 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	81.18 %
Unclassified	root	N/A	18.82 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	40.00 %
Unclassified	root	N/A	18.82 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	40.00 %
Unclassified	root	N/A	18.82 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	20.59 %
Unclassified	root	N/A	18.82 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	12.94 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	20.59 %
Unclassified	root	N/A	18.82 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	12.94 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	20.59 %
Unclassified	root	N/A	18.82 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	12.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.82 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	12.94 %
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	5.29 %
Gemmatimonas	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas	2.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.82 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	12.94 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	5.29 %
Gemmatimonas aurantiaca	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	0.59 %
unclassified Gemmatimonas	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas	0.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.82 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	12.94 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	5.29 %
Gemmatimonas sp.	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas → Gemmatimonas sp.	0.59 %
Gemmatimonas aurantiaca	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	0.59 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002886\|JGI25612J43240_1020052	All Organisms → cellular organisms → Bacteria	987	Open in IMG/M
3300002908\|JGI25382J43887_10123724	All Organisms → cellular organisms → Bacteria	1342	Open in IMG/M
3300002908\|JGI25382J43887_10218100	All Organisms → cellular organisms → Bacteria	903	Open in IMG/M
3300004062\|Ga0055500_10000226	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	5092	Open in IMG/M
3300005166\|Ga0066674_10006632	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	4613	Open in IMG/M
3300005177\|Ga0066690_10705663	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	667	Open in IMG/M
3300005180\|Ga0066685_10579684	All Organisms → cellular organisms → Bacteria	772	Open in IMG/M
3300005186\|Ga0066676_10070550	All Organisms → cellular organisms → Bacteria	2047	Open in IMG/M
3300005406\|Ga0070703_10096253	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1036	Open in IMG/M
3300005446\|Ga0066686_10063210	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2297	Open in IMG/M
3300005450\|Ga0066682_10001968	All Organisms → cellular organisms → Bacteria	8567	Open in IMG/M
3300005451\|Ga0066681_10297420	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	987	Open in IMG/M
3300005467\|Ga0070706_100090180	All Organisms → cellular organisms → Bacteria	2843	Open in IMG/M
3300005471\|Ga0070698_100005232	All Organisms → cellular organisms → Bacteria	14192	Open in IMG/M
3300005556\|Ga0066707_10280798	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1089	Open in IMG/M
3300005568\|Ga0066703_10228509	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1131	Open in IMG/M
3300005574\|Ga0066694_10477589	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300006031\|Ga0066651_10623139	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300006046\|Ga0066652_101315457	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	681	Open in IMG/M
3300006755\|Ga0079222_10008137	All Organisms → cellular organisms → Bacteria	3661	Open in IMG/M
3300006804\|Ga0079221_10777528	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300006845\|Ga0075421_101187055	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	852	Open in IMG/M
3300006852\|Ga0075433_10194481	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas → Gemmatimonas sp.	1804	Open in IMG/M
3300006852\|Ga0075433_10213772	All Organisms → cellular organisms → Bacteria	1713	Open in IMG/M
3300006854\|Ga0075425_100681951	All Organisms → cellular organisms → Bacteria	1180	Open in IMG/M
3300006854\|Ga0075425_100787009	All Organisms → cellular organisms → Bacteria	1090	Open in IMG/M
3300006903\|Ga0075426_10055855	All Organisms → cellular organisms → Bacteria	2820	Open in IMG/M
3300006903\|Ga0075426_10156919	All Organisms → cellular organisms → Bacteria	1642	Open in IMG/M
3300006903\|Ga0075426_10546172	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	863	Open in IMG/M
3300006904\|Ga0075424_100624658	All Organisms → cellular organisms → Bacteria	1150	Open in IMG/M
3300006914\|Ga0075436_101171691	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	580	Open in IMG/M
3300006954\|Ga0079219_10085228	All Organisms → cellular organisms → Bacteria	1499	Open in IMG/M
3300007255\|Ga0099791_10069484	Not Available	1596	Open in IMG/M
3300007255\|Ga0099791_10094995	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1368	Open in IMG/M
3300007255\|Ga0099791_10144447	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1110	Open in IMG/M
3300007255\|Ga0099791_10287494	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	783	Open in IMG/M
3300007258\|Ga0099793_10051168	All Organisms → cellular organisms → Bacteria	1822	Open in IMG/M
3300007258\|Ga0099793_10120214	All Organisms → cellular organisms → Bacteria	1228	Open in IMG/M
3300007265\|Ga0099794_10040640	All Organisms → cellular organisms → Bacteria	2212	Open in IMG/M
3300007788\|Ga0099795_10071097	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1313	Open in IMG/M
3300009090\|Ga0099827_10237017	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1529	Open in IMG/M
3300009090\|Ga0099827_10252968	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1481	Open in IMG/M
3300009137\|Ga0066709_101236439	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1098	Open in IMG/M
3300009143\|Ga0099792_10041754	All Organisms → cellular organisms → Bacteria	2191	Open in IMG/M
3300009162\|Ga0075423_10654045	All Organisms → cellular organisms → Bacteria	1108	Open in IMG/M
3300010159\|Ga0099796_10179814	Not Available	848	Open in IMG/M
3300010304\|Ga0134088_10095195	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1399	Open in IMG/M
3300010320\|Ga0134109_10013510	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	2400	Open in IMG/M
3300010322\|Ga0134084_10113794	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	877	Open in IMG/M
3300010322\|Ga0134084_10376175	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300010323\|Ga0134086_10276408	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	646	Open in IMG/M
3300010329\|Ga0134111_10284949	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300010333\|Ga0134080_10040986	All Organisms → cellular organisms → Bacteria	1795	Open in IMG/M
3300010333\|Ga0134080_10104119	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1170	Open in IMG/M
3300010333\|Ga0134080_10178603	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	911	Open in IMG/M
3300010400\|Ga0134122_10282099	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1417	Open in IMG/M
3300011269\|Ga0137392_10913334	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	723	Open in IMG/M
3300012198\|Ga0137364_10415091	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1008	Open in IMG/M
3300012199\|Ga0137383_10010230	All Organisms → cellular organisms → Bacteria	6245	Open in IMG/M
3300012199\|Ga0137383_10294027	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1189	Open in IMG/M
3300012199\|Ga0137383_11101237	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300012200\|Ga0137382_10721445	Not Available	715	Open in IMG/M
3300012200\|Ga0137382_11279863	Not Available	518	Open in IMG/M
3300012201\|Ga0137365_10124905	All Organisms → cellular organisms → Bacteria	1935	Open in IMG/M
3300012201\|Ga0137365_10136984	Not Available	1840	Open in IMG/M
3300012201\|Ga0137365_10489565	Not Available	904	Open in IMG/M
3300012202\|Ga0137363_11576019	Not Available	549	Open in IMG/M
3300012203\|Ga0137399_10067435	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	2671	Open in IMG/M
3300012203\|Ga0137399_10592940	Not Available	931	Open in IMG/M
3300012204\|Ga0137374_10417160	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1062	Open in IMG/M
3300012204\|Ga0137374_11271262	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	510	Open in IMG/M
3300012207\|Ga0137381_11189497	All Organisms → cellular organisms → Bacteria	655	Open in IMG/M
3300012208\|Ga0137376_11624194	Not Available	537	Open in IMG/M
3300012209\|Ga0137379_10146802	All Organisms → cellular organisms → Bacteria	2266	Open in IMG/M
3300012210\|Ga0137378_11796845	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300012211\|Ga0137377_10296150	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1552	Open in IMG/M
3300012211\|Ga0137377_11055436	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	743	Open in IMG/M
3300012285\|Ga0137370_10214065	All Organisms → cellular organisms → Bacteria	1133	Open in IMG/M
3300012349\|Ga0137387_10678442	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
3300012351\|Ga0137386_10676479	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	742	Open in IMG/M
3300012353\|Ga0137367_10494784	Not Available	862	Open in IMG/M
3300012354\|Ga0137366_11251785	Not Available	502	Open in IMG/M
3300012355\|Ga0137369_10339221	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1101	Open in IMG/M
3300012355\|Ga0137369_10439997	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	932	Open in IMG/M
3300012356\|Ga0137371_10109276	Not Available	2156	Open in IMG/M
3300012361\|Ga0137360_10349448	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1237	Open in IMG/M
3300012361\|Ga0137360_11220215	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300012362\|Ga0137361_11615735	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300012397\|Ga0134056_1221550	Not Available	562	Open in IMG/M
3300012532\|Ga0137373_10302574	All Organisms → cellular organisms → Bacteria	1271	Open in IMG/M
3300012683\|Ga0137398_10295294	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1088	Open in IMG/M
3300012683\|Ga0137398_10464295	All Organisms → cellular organisms → Bacteria	867	Open in IMG/M
3300012685\|Ga0137397_10007133	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	7761	Open in IMG/M
3300012685\|Ga0137397_10143066	All Organisms → cellular organisms → Bacteria	1770	Open in IMG/M
3300012685\|Ga0137397_10406854	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1013	Open in IMG/M
3300012917\|Ga0137395_10091424	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	2005	Open in IMG/M
3300012917\|Ga0137395_10496880	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	878	Open in IMG/M
3300012917\|Ga0137395_10960413	Not Available	615	Open in IMG/M
3300012918\|Ga0137396_10368698	All Organisms → cellular organisms → Bacteria	1063	Open in IMG/M
3300012918\|Ga0137396_11197337	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	536	Open in IMG/M
3300012922\|Ga0137394_10031937	All Organisms → cellular organisms → Bacteria	4282	Open in IMG/M
3300012922\|Ga0137394_10242860	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1539	Open in IMG/M
3300012922\|Ga0137394_11608832	Not Available	506	Open in IMG/M
3300012924\|Ga0137413_10547631	Not Available	858	Open in IMG/M
3300012925\|Ga0137419_10175169	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1570	Open in IMG/M
3300012925\|Ga0137419_10590152	All Organisms → cellular organisms → Bacteria	891	Open in IMG/M
3300012925\|Ga0137419_10767496	Not Available	787	Open in IMG/M
3300012925\|Ga0137419_11643125	Not Available	547	Open in IMG/M
3300012925\|Ga0137419_11978491	Not Available	501	Open in IMG/M
3300012930\|Ga0137407_11927472	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300012944\|Ga0137410_10172677	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1660	Open in IMG/M
3300014157\|Ga0134078_10102156	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas	1074	Open in IMG/M
3300015054\|Ga0137420_1078997	Not Available	880	Open in IMG/M
3300015242\|Ga0137412_10028500	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	4558	Open in IMG/M
3300015242\|Ga0137412_10065367	All Organisms → cellular organisms → Bacteria	2959	Open in IMG/M
3300015359\|Ga0134085_10023466	All Organisms → cellular organisms → Bacteria	2365	Open in IMG/M
3300015359\|Ga0134085_10066388	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1463	Open in IMG/M
3300017654\|Ga0134069_1004247	All Organisms → cellular organisms → Bacteria	3978	Open in IMG/M
3300017654\|Ga0134069_1062920	Not Available	1178	Open in IMG/M
3300017657\|Ga0134074_1334359	Not Available	556	Open in IMG/M
3300017659\|Ga0134083_10110974	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1088	Open in IMG/M
3300018028\|Ga0184608_10016462	All Organisms → cellular organisms → Bacteria	2617	Open in IMG/M
3300018054\|Ga0184621_10007041	All Organisms → cellular organisms → Bacteria	3137	Open in IMG/M
3300018071\|Ga0184618_10186926	All Organisms → cellular organisms → Bacteria	861	Open in IMG/M
3300018076\|Ga0184609_10450713	Not Available	592	Open in IMG/M
3300018433\|Ga0066667_11327456	Not Available	629	Open in IMG/M
3300018482\|Ga0066669_10364470	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1207	Open in IMG/M
3300019877\|Ga0193722_1145790	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300019879\|Ga0193723_1011290	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	2848	Open in IMG/M
3300019879\|Ga0193723_1012569	All Organisms → cellular organisms → Bacteria	2676	Open in IMG/M
3300019883\|Ga0193725_1007256	All Organisms → cellular organisms → Bacteria	3178	Open in IMG/M
3300020170\|Ga0179594_10041074	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas	1527	Open in IMG/M
3300020170\|Ga0179594_10084416	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas	1124	Open in IMG/M
3300021086\|Ga0179596_10064409	All Organisms → cellular organisms → Bacteria	1569	Open in IMG/M
3300022195\|Ga0222625_1417084	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1575	Open in IMG/M
3300022756\|Ga0222622_10832654	Not Available	675	Open in IMG/M
3300025885\|Ga0207653_10083963	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1106	Open in IMG/M
3300025910\|Ga0207684_10064309	All Organisms → cellular organisms → Bacteria	3115	Open in IMG/M
3300025965\|Ga0210090_1002768	All Organisms → cellular organisms → Bacteria	2284	Open in IMG/M
3300026285\|Ga0209438_1001083	All Organisms → cellular organisms → Bacteria	8839	Open in IMG/M
3300026306\|Ga0209468_1036105	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1710	Open in IMG/M
3300026307\|Ga0209469_1010538	All Organisms → cellular organisms → Bacteria	3492	Open in IMG/M
3300026313\|Ga0209761_1045705	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	2492	Open in IMG/M
3300026319\|Ga0209647_1155616	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	950	Open in IMG/M
3300026320\|Ga0209131_1066096	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	1991	Open in IMG/M
3300026320\|Ga0209131_1235074	All Organisms → cellular organisms → Bacteria	779	Open in IMG/M
3300026323\|Ga0209472_1044101	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1955	Open in IMG/M
3300026324\|Ga0209470_1057757	Not Available	1846	Open in IMG/M
3300026329\|Ga0209375_1258632	Not Available	579	Open in IMG/M
3300026343\|Ga0209159_1018554	All Organisms → cellular organisms → Bacteria	3963	Open in IMG/M
3300026528\|Ga0209378_1034020	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2645	Open in IMG/M
3300026537\|Ga0209157_1057753	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	2013	Open in IMG/M
3300026537\|Ga0209157_1099966	Not Available	1379	Open in IMG/M
3300026538\|Ga0209056_10003126	All Organisms → cellular organisms → Bacteria	17780	Open in IMG/M
3300026538\|Ga0209056_10119769	Not Available	2093	Open in IMG/M
3300026555\|Ga0179593_1201513	All Organisms → cellular organisms → Bacteria	3151	Open in IMG/M
3300027643\|Ga0209076_1024974	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1642	Open in IMG/M
3300027643\|Ga0209076_1043893	All Organisms → cellular organisms → Bacteria	1261	Open in IMG/M
3300027655\|Ga0209388_1178182	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300027671\|Ga0209588_1002227	All Organisms → cellular organisms → Bacteria	5238	Open in IMG/M
3300027775\|Ga0209177_10036978	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1316	Open in IMG/M
3300027882\|Ga0209590_10354512	Not Available	946	Open in IMG/M
3300027903\|Ga0209488_10008534	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	7627	Open in IMG/M
3300028536\|Ga0137415_10002357	All Organisms → cellular organisms → Bacteria	18834	Open in IMG/M
3300028536\|Ga0137415_10015062	All Organisms → cellular organisms → Bacteria	7670	Open in IMG/M
3300028828\|Ga0307312_10719669	Not Available	661	Open in IMG/M
3300028878\|Ga0307278_10098796	All Organisms → cellular organisms → Bacteria	1312	Open in IMG/M
3300031152\|Ga0307501_10076622	All Organisms → cellular organisms → Bacteria	803	Open in IMG/M
3300031424\|Ga0308179_1048493	Not Available	547	Open in IMG/M
3300034178\|Ga0364934_0055630	All Organisms → cellular organisms → Bacteria	1466	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.53%
Host-Associated	Host-Associated	6.47%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.82%
Plants	Host-Associated → Plants	6.47%
Aquatic	Environmental → Aquatic	4.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	88.24%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.47%
Sediment	Environmental → Aquatic → Sediment	2.94%
Marine	Environmental → Aquatic → Marine	1.18%
Freshwater	Environmental → Aquatic → Freshwater	0.59%
Floodplain	Environmental → Terrestrial → Floodplain	0.59%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	85.29%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.47%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.94%
Loam	Environmental → Terrestrial → Soil → Loam	2.94%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.18%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.59%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.59%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	62.94%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	20.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.47%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.94%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.94%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.35%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.18%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.59%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.59%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	47.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	13.53%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	10.00%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	6.47%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.47%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.71%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.94%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.35%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.35%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.18%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.59%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.59%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.59%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.59%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002886	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300004062	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D2	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012397	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019877	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1	Environmental	Open in IMG/M
3300019879	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2	Environmental	Open in IMG/M
3300019883	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300022195	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025965	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D2 (SPAdes)	Environmental	Open in IMG/M
3300026285	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)	Environmental	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300026307	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300031152	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_S	Environmental	Open in IMG/M
3300031424	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_150 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034178	Sediment microbial communities from East River floodplain, Colorado, United States - 27_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25612J43240_10200522	3300002886	Grasslands Soil	MGLVAGVVVLLIILGWFFWPSKDAPRRDAENAELDAAERDVQEAADEETVRDWGPGTGQKPLP*
JGI25382J43887_101237242	3300002908	Grasslands Soil	MAVIAVIAVLLIVFTWFLWPSKDASPASRERPDVDEAELEAAERDVQEAADEERVRDWGPGSGQKPLP*
JGI25382J43887_102181001	3300002908	Grasslands Soil	MAVIGVIAVLLIVLVWFLWPSTDAGPARRERPDVDAAELEAAERDVQEAADEESVR
Ga0055500_100002265	3300004062	Natural And Restored Wetlands	MGTIAIAVVLLGLLAWFFWPTKGSAPARRDTDDIDAAELEAAERDVQEAPDAEHVRDWGPGTGQKPLP*
Ga0066674_100066322	3300005166	Soil	MAVIAVIVVLLIVFAWFLWPSNDARPARRERPEIDEAELEAAERDVQEAADEESVRDWGPGSGQKPPP*
Ga0066690_107056631	3300005177	Soil	IAVLLIVLVWFLWPSKDAGPARSERPDVDAAELEAAERDVQEAADEESVRDWGPGSGQKPLP*
Ga0066685_105796842	3300005180	Soil	MGTVAVIAVLLILLAWFFWPSKAPRPRDFENAELEAAERDVQEAADEESVRDWGPGSGQKPLP*
Ga0066676_100705502	3300005186	Soil	MGVVAVSVVVLIVLAWFLWPANATNAGQPQRDRPDVDEAELEAAERDVQEAVDEESVRDWGPGTGQKPLP*
Ga0070703_100962532	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MAVIGVIAVVLIVLAWFLWPSKAHRVPDVENAELEEAEREVQEAPDQESVRDWGPGTGQKPLP*
Ga0066686_100632102	3300005446	Soil	MGLVAGVVVLLIILGWFFWPSKDAAAARRERPDVDESELETAERDVQEAADEESVRDWGPGTGQKPLP*
Ga0066682_100019682	3300005450	Soil	MAVIAVIVVLLIVFAWFLWPSNDARPARRERPEIDEAELAAAERDVQEAADEESVRDWGPGSGQKPPP*
Ga0066681_102974201	3300005451	Soil	MAVIGVSAVVLIVLAWFLWPAKDTPPAPRDRPDVDEAELGAAERDVQEAADEETVRDWGPGTGQKPLP*
Ga0070706_1000901802	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MAVIGVSLVVLIVLAWFLWPSKNAPLSSRDRADVDEQELEAAERDVQEAADDESVRDWGPGTGQKPLP*
Ga0070698_1000052322	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MAVIGVSAVVLIVLAWFLWPSKDVRPTSRDRPDVDESELEAAERDVQDAADEESVRDWGPGTGQKPLP*
Ga0066707_102807982	3300005556	Soil	MGTVAVIAVLLILLAWFFWPSQAPRPRDFENAELEAAERDVQEAADEESVRDWGPGSGQKPLP*
Ga0066703_102285092	3300005568	Soil	MAVIGVIAVLLIVLVWFLWPSKDAGPARRERPDVDAAELEAAERDVQEAADEESVRDWGPGSGQKPLP*
Ga0066694_104775892	3300005574	Soil	EVREEPRCLMAVIGVSAVVLIVLAWFLWPAKDTPPAPRDRPDVDEAELEAAERDVQEAADEETVRDWGPGTGQKPLP*
Ga0066651_106231392	3300006031	Soil	MAVIAVSAVVLIVLAWFLWPTRDAPPAPRDRPDVDARELEAAERDVQEAADEETVRDWGPGTGQKPLP*
Ga0066652_1013154571	3300006046	Soil	IGVSAVVLIVLAWFLWPAKDTPPAPRDRPDVDEAELEAAERDVQEAADEETVRDWGPGTGQKPLP*
Ga0079222_100081375	3300006755	Agricultural Soil	MAVIGVSVVVLIVLAWFLWPSKHAPPSSRDRPDVDERELEAAERDVQEAADEESVRDWGPGTGQKPLP*
Ga0079221_107775281	3300006804	Agricultural Soil	MAVIGVSVVVLIVLAWFLWPSKHAPPSSRDRPDVDERELEAAERDVQEAADEESVRDWGP
Ga0075421_1011870552	3300006845	Populus Rhizosphere	MGAVAVGVVLLLLLAWFFWPSRGATDAPSRGGRPRPGVDDAELEAAERDVRQAADEQSVRDWGPGTGQKPLP*
Ga0075433_101944812	3300006852	Populus Rhizosphere	MATIVVISMVVLVLVWFIWPTRVTESGGPPKAERPGVDEAELRAAERDVQEAADQESVRDWGPGTGQKPLP*
Ga0075433_102137722	3300006852	Populus Rhizosphere	MAVIGVSTVVLIVLAWLLWPSKNAPPSSRDRPDVDEQELEAAERDVQEAADNESVRDWGTGTGQKPLP*
Ga0075425_1006819512	3300006854	Populus Rhizosphere	MAVIGVSTVVLIVLAWFLWPSKNARPSSRDRPDVDEQELEAAERDVQEAADNESVRDWGTGTGQPLP*
Ga0075425_1007870092	3300006854	Populus Rhizosphere	MAVIGVSVVVLIVLAWFLWPSKNAPPSSRDRPDVDEQELEAAERDVQEAPDEESVRDWGPGTGQKPLP*
Ga0075426_100558552	3300006903	Populus Rhizosphere	MAVIGVSTVVLIVLAWFLWPSKNARPSSRDRPDVDEQELEAAERDVQEAADNESVRDWGTGTGQKPLP*
Ga0075426_101569193	3300006903	Populus Rhizosphere	MAVIGVSAIVLIVLAWFLWPSKNAPPSSRDRPDVDEQELEAAERDVQEAADEESVRDWGPGTGQKPLP*
Ga0075426_105461721	3300006903	Populus Rhizosphere	EVREEPRCLMAVIGVSVVVLIVLAWFLWPSKNAPPSSRDRPDVDEQELEAAERDVQEAADEESVRDWGPGTGQKPLP*
Ga0075424_1006246582	3300006904	Populus Rhizosphere	MAVIGVSTVVLIVLAWLLWPSKNAPPPSRDRPDVDEQELEAAERDVQEAADNESVRDWGTGTGQKPLP*
Ga0075436_1011716912	3300006914	Populus Rhizosphere	MAVIGVSVVVLIVLAWFLWPSKNAPPSSRDRPDVDEQELEAAERDVQEAADEESVRDWGPGTGQKPLP*
Ga0079219_100852282	3300006954	Agricultural Soil	MAVIGVSVVVLIVLAWFLWPSKHAPPSSRDRPDIDERELEAAERDVQEAADEESVRDWGPGTGQKPLP*
Ga0099791_100694842	3300007255	Vadose Zone Soil	MAVIGVIAVLLIVLVWLLWPSADPKPARRERPDVDEAELEAAERDVQEAADEETVRDWGPGAGQKPPP*
Ga0099791_100949952	3300007255	Vadose Zone Soil	MGLVAGVVVLLIILGWFFWPSKDAPHRDAENAELNAAERDVQEAADEETVRDWGPGTGQKPLP*
Ga0099791_101444472	3300007255	Vadose Zone Soil	MAIIAVTAVLLIVLAWFLWPSRAATAARQMRREWPDVDEAELEAAERDVQEAADEESVRDWGPGSGQKPLP*
Ga0099791_102874942	3300007255	Vadose Zone Soil	MGLIAGVVVLLIVLGWFFWPSKTVPRHDVENTELDAAERDVREAADEDSVRDWGPGTGQKPLP*
Ga0099793_100511683	3300007258	Vadose Zone Soil	MAVIGIIAVLLIVLVWFLWPSKDAGPARRERPDVDAAELEAAERDVQEAADEESVRDWGPGSGQRPLP*
Ga0099793_101202142	3300007258	Vadose Zone Soil	MGLIAGVVVLLIVLGWFFWPSKAVPRHDVENTELDAAERDVREAADEDSVRDWGPGTGQKPLP*
Ga0099794_100406403	3300007265	Vadose Zone Soil	MAIIAVTAVLLIVLAWFLWPSRAATAARQMRRERPDVDEAELEAAERDVQEAADEESVRDWGPGSGQKPLP*
Ga0099795_100710972	3300007788	Vadose Zone Soil	MATVAVIAVLVIVLAWFFWPSKTAPRRNVDNAELDAAERDVQEAADQDSVKDWGPGSGQKPLP*
Ga0099827_102370172	3300009090	Vadose Zone Soil	MGIVAVGLVLLIMLAWFFWPSKAPRPRDVENAELEAAERDVQEAADEESVRDWGPGSGQKPLP*
Ga0099827_102529682	3300009090	Vadose Zone Soil	MAVIAVIGVLLIGLAWFLWPSRAPTTAGPARRERPDVDAAELEAAERDVQEAADEESVRDWGPGSGQKPLP*
Ga0066709_1012364392	3300009137	Grasslands Soil	MGTVAVIAVLLILLAWFFWPSKAPRPRDVENAELEAAERDVQEAADEESVRDWGPGSGQKPLP*
Ga0099792_100417542	3300009143	Vadose Zone Soil	MATIAVIAVLVIVLAWFFWPSKTAPRRNVDNAELDAAERDVQEAADQDSVKDWGPGSGQKPLP*
Ga0075423_106540452	3300009162	Populus Rhizosphere	MAVIGVIAVVLIVLAWFLWPSKGVAPARRERPDVDESELEAAERDVQEAADEESVRDWGPGAGQKPLP*
Ga0099796_101798142	3300010159	Vadose Zone Soil	MATVAVIAVLVIVLAWFFWPSKTAPRRNVDNAELEAAERDVQEAADQDSVKDWGPGSGQKPLA*
Ga0134088_100951952	3300010304	Grasslands Soil	MAVIGVIAVVLIVLGWFLWPSKTPPRRDVDNAELAEAERDVQEAADEESIRDWGPGTGQKPLP*
Ga0134109_100135102	3300010320	Grasslands Soil	MGIVAVALVLLILLAWFFWPSKGAAQARPARRERPDVDEAELESAERDVQEATDEESVRDWGPGSGQKPLP*
Ga0134084_101137941	3300010322	Grasslands Soil	EVREEPRCLMAVIAVIVVLLIVFAWFLWPSNDARPARRERPEIDEAELAAAERDVQEAADEESVRDWGPGSGQKPPP*
Ga0134084_103761751	3300010322	Grasslands Soil	LVLLILLAWFFWPSKGAAQARPARRERPDVDEAELESAERDVQEATDEESVRDWGPGSGQKPLP*
Ga0134086_102764081	3300010323	Grasslands Soil	PQVHRRKREVREEPRCLMGLVAGVVVLLIILGWFFWPSKDAAAARRERPDVDESELETAERDVQEAADEESVRDWGPGTGQKPLP*
Ga0134111_102849492	3300010329	Grasslands Soil	MAVIAVVVVLLIVFAWFLWHSNDARPARRERPEIDEAELEAAERDVQEAADEESVRDWGPGSGQKPLP*
Ga0134080_100409863	3300010333	Grasslands Soil	CEVREEPRCLMAVIAVIVVLLIVFAWFLWPSNDARPARRERAEIDEAELEAAERDVQEAADEESVRDWGPGSGQKPPP*
Ga0134080_101041191	3300010333	Grasslands Soil	LLAWFFWPSKAPRPRDFENAELEAAERDVQEAADEESVRDWGPGSGQKPLP*
Ga0134080_101786032	3300010333	Grasslands Soil	CEVREEPRCLMAVIAVIVVLLIVFAWFLWPSNDARPARRERPEIDEAELEAAERDVQEAADEESVRDWGPGSGQKPPP*
Ga0134122_102820992	3300010400	Terrestrial Soil	MAVIGVIAVVLIVLAWFLWPSKAHRVPDVENAELEEAEREVQEAPDQESVRDWGPGTGHKPLP*
Ga0137392_109133341	3300011269	Vadose Zone Soil	IGLAWFLWPSKDAGPARRERPDVDAAELEAAERDVQEAADEESVRDWGPGSGQKPLP*
Ga0137364_104150912	3300012198	Vadose Zone Soil	MAVIAVVVVLLIIFAWFLWPSNDARPARRERPEVDEVELEAAERDVQEAADEESVRDWGPGSGHKPLP*
Ga0137383_100102305	3300012199	Vadose Zone Soil	MGLVAGVVVLLIILGWFFWPSKDAAPARHERPDVDESELEAAERDVQEAADEESVRDWGPGTGQKPLP*
Ga0137383_102940272	3300012199	Vadose Zone Soil	MAVIGIIAVLLIVLVWFLWPSKDAGPARRERPDVDAAELEAAERDVQEAADEESVRDWGPGSGQKPLP*
Ga0137383_111012372	3300012199	Vadose Zone Soil	MAVIGVSAVVLIVLAWFLWPAKAAPPAPRDRPDVDETELEAAERDVQEAADEETVRDWGPGTGQKPLP*
Ga0137382_107214452	3300012200	Vadose Zone Soil	MAVIGVSAVVLIVLAWFLWPARDAPPAPRDRPDVDERELEAAERDVQEAADEETVRDWGPGTGQKPLP*
Ga0137382_112798631	3300012200	Vadose Zone Soil	MAVIGVSAVVLIVLAWFFWPAKGAPPAARDRPDVDETELEAAERDVQEAADEETVRDWGPGTGQKPLP
Ga0137365_101249053	3300012201	Vadose Zone Soil	MAVIGVSAVVLIILAWFLWPARDAPPAPRDRPDVDETELEAAERDVQEAADEETVRDWGPGTGQKPLP*
Ga0137365_101369842	3300012201	Vadose Zone Soil	MAIIGVSAVVLIVLAWFLWPSKDAPPAPRDRPDVDERELEAAERDVQEAADEETVRDWGPGTGQKPLP*
Ga0137365_104895652	3300012201	Vadose Zone Soil	MAVIAVIVVLLIVFAWFLWPSNDARPARRERAEIDEAELEAAERDVQEAADEETVRDWGPGTGQKPL
Ga0137363_115760191	3300012202	Vadose Zone Soil	MGVVAVIVVVLIVLAWFVWPARAATKEGQPPRDRPDVDEAELEAAERDVQEAADEARVRDWGPGTGQKPLP*
Ga0137399_100674352	3300012203	Vadose Zone Soil	MAVIAVIAVLLIVLAWFLWPGKDISPARRERPDVDAAELEAAERDVQEAADDESVRDWGPGSGQKPLP*
Ga0137399_105929402	3300012203	Vadose Zone Soil	MGLVAGVVVLLIILGWFFWPSKDAPRRDAENAELNAAERDVQEAADEETVRDWGPGTGQKPLP*
Ga0137374_104171602	3300012204	Vadose Zone Soil	MGTLAVIAVLLILLAWFFWPSKAPRDRNVENAELEAAERDVQEAADEESVRDWGPGTGQKPLP*
Ga0137374_112712622	3300012204	Vadose Zone Soil	MAVIGISAVVLIVLAWFLWPGKDAPPAPRDRPDVDQGELEAAERDVQEAADEASVRDWGPGSGQKPLP*
Ga0137381_111894972	3300012207	Vadose Zone Soil	MAVIGVIAVLLIVLVWFLWPSTDAGPVRRERPDVDAAELEAAERDVQEAADEESVRDWGPGAGHKPLP*
Ga0137376_116241942	3300012208	Vadose Zone Soil	MAVIAVVVVLLIVFAWLLWPSNDARPARRERPEVDEVELEAAERDVQEAADEESVRDWGPGSGHKPLP*
Ga0137379_101468023	3300012209	Vadose Zone Soil	MAVIGVSAVVLIILAWFLWPSKDAPPAPRDRPDVDETELEAAERDVQEAADEETVRDWGPGTGQKPLP*
Ga0137378_117968451	3300012210	Vadose Zone Soil	ILAWFLWPARDAPPAPRDRPDVDETELEAAERDVQEAADEETVRDWGPGTGQKPLP*
Ga0137377_102961502	3300012211	Vadose Zone Soil	MAVIAVIAVLLIVFVWFLWPSKDAGTARRERPDVDETELEAAERDVQEATDEESVRDWGPGSGRKPLP*
Ga0137377_110554362	3300012211	Vadose Zone Soil	VLLIILGWFFWPSKDAPRRDAENAELNAAERDVQEAADEETVRDWGPGTGQKPLP*
Ga0137370_102140652	3300012285	Vadose Zone Soil	MADIAVVVVLLIVSAWFLWPSNDARPARRERPEVDEVELEAAERDVQEAADDESVRDWGPGSGHKPLP*
Ga0137387_106784422	3300012349	Vadose Zone Soil	MAVIGVSAVVLIILAWFLWPARDAPPAPRDRPDVDETELEAAERDVQEAADEETVRDWGPGTGQKPLPWRRFLWPRASCAP*
Ga0137386_106764791	3300012351	Vadose Zone Soil	IVLAWFLWPAKGAPPAPRDRPDVDETELEAAERDVQEAADEETVRDWGPGTGQKPLP*
Ga0137367_104947842	3300012353	Vadose Zone Soil	MAVIGVSAVVLIILTWFLWPARDAPPAPRDRPDVDETELEAAERDVQEAADEETVRDWGPGTGQKPLP*
Ga0137366_112517851	3300012354	Vadose Zone Soil	MAVIAVIVVLLIVFAWFLWPSNDARPGRRERPEIDEAELEAAERDVQEAADEASVRDWGPGSGQKPLP*
Ga0137369_103392212	3300012355	Vadose Zone Soil	MGLVAGVVVLLIILGWFFWPSKDAPRRDAENAELDAAERDVQEAADEDTVRDWGPGTGQKPLP*
Ga0137369_104399972	3300012355	Vadose Zone Soil	MGLIAGVVVLLIILGWFFWPSKAAPRRDVENAELDAAERDVREAATEESVRDWGPGTGQKPLP*
Ga0137371_101092762	3300012356	Vadose Zone Soil	MAVIGVSAVVLIVLAWFLWPAKGAPPAPRDRPDVDETELEAAERDVQEAADEETVRDWGPGTGQKPLP*
Ga0137360_103494482	3300012361	Vadose Zone Soil	MGTVAVIAVLLILLAWFFWPSKAPRPRDVENAELEAAERDVQEAADEESVRDWGPGTGQKPLP*
Ga0137360_112202152	3300012361	Vadose Zone Soil	MAVIGVSVVVLIVLAWFLWPTSKGAAPAPRDRPDVDETELEAAERDVQEAADEETVRDWGPGTGQKPLP*
Ga0137361_116157352	3300012362	Vadose Zone Soil	EEPRCLMAVIGVIAVVLIVLAWFLWPGKDAGPARGERPHVDESELEAAERDVQEAADEESVRDWGPGAGQKPLP*
Ga0134056_12215502	3300012397	Grasslands Soil	MAVIGVIAVVLIVLGWFLWPSKTPPRRDVDNAELAEAERDVQEAADEESIRD
Ga0137373_103025741	3300012532	Vadose Zone Soil	LLIILGWFFWPSKAAPRRDVENAELDAAERDVREAATEESVRDWGPGTGQKPLP*
Ga0137398_102952942	3300012683	Vadose Zone Soil	VSAVVLIVLAWFLWPAKNATPAPRDRPDVDETELEAAERDVQEAADEETVRDWGPGTGQKPLP*
Ga0137398_104642952	3300012683	Vadose Zone Soil	MGLVAGGVVLLIILGWFFWPSKGAPRRDGENAELDAAERDVQEAADEETVRDWGPGSGQKPLP*
Ga0137397_100071332	3300012685	Vadose Zone Soil	MAVIAVIAVLLIVLAWFLWPSKDVSPARRERPDVDAAELEAAERDVQEAADDESVRDWGPGSGQKPLP*
Ga0137397_101430662	3300012685	Vadose Zone Soil	MGLIAGVVVLLIILGWFFWPGKGAPRRDAENAELDAAERDVREAADEETVRDWGPGSGQKPLP*
Ga0137397_104068542	3300012685	Vadose Zone Soil	MGLIAGVVVLLIVLGWFFWPSKAAPRHDVENTELDAAERDVREAADEDSVRDWGPGTGQKPLP*
Ga0137395_100914242	3300012917	Vadose Zone Soil	MGVVAVIVVVLIALAWFVWPATAATNAGQPQRDRPDVDEAELEAAERDVQDAAAEENVRDWGPGTGQKPLP*
Ga0137395_104968802	3300012917	Vadose Zone Soil	VHRGKREVREEPRCLMAVIGVSVVVLIVLAWFLWPTSKGAAPAPRDRPDVDETELEAAERDVQEAADEETVRDWGPGTGQKPLP*
Ga0137395_109604131	3300012917	Vadose Zone Soil	MAVIGVIAVVLIVLAWFLWPSKDAPAAPRDRPDVDESELEAAERDVQEAADEERVRDWGPGTGQKPLP*
Ga0137396_103686982	3300012918	Vadose Zone Soil	MGLIAGVVVLLIVLGWFFWPSRAAPRHDVENTELDAAERDVREAADEDSVRDWGPGTGQKPLP*
Ga0137396_111973372	3300012918	Vadose Zone Soil	MAVIGIIAVLLIVLVWFLWPSKDAGPARRERPDVDAAELDAAERDVQEAADEESVRDWGPGSGQKPLP*
Ga0137394_100319374	3300012922	Vadose Zone Soil	MGVLAVIAVLLVVLGWFLWPSKAATVPRRERADVDEAELEAAERDVQDAADQDSVRDWGPGTGQAP*
Ga0137394_102428602	3300012922	Vadose Zone Soil	MGLIAGVVVLLIILGWFFWPSKSAPRRDAENAELDAAERDVREAADEETVRDWGPGSGQKPLP*
Ga0137394_116088322	3300012922	Vadose Zone Soil	MGLIAGVVVLLIVLGWFFWPSKAAPRHDVENTELDAAERDVREAADEESVRDWGPGTGQ
Ga0137413_105476312	3300012924	Vadose Zone Soil	MAVIGVSAVVLIVLAWFLWPAKNATPAPRDRPDVDETELEAAERDVQEAADEETVRDWGPGTGQKPLP*
Ga0137419_101751692	3300012925	Vadose Zone Soil	MAVIGIIAVLLIVLVWFLWPSNDAGPARRERPDVDAAELEAAERDVQEAADEESVRDWGPGSGQKPLP*
Ga0137419_105901522	3300012925	Vadose Zone Soil	MAVIAVIAVLLIVLAWFLWPGKDVGPARRERPDVDAAELEAAERDVQEAADDESVRDWGPGSGQKPLP*
Ga0137419_107674961	3300012925	Vadose Zone Soil	MGLIAGVVVLLIILGWFFWPSKSAPRRDAENAELDAAERDVREAADEETVRDWGPGSGQKPLP
Ga0137419_116431252	3300012925	Vadose Zone Soil	MGLVAGVVVLLIILGWFFWPSKGAPRRDGENAELDAAERDVQEAADEETVRDWGPGSGQKPLP*
Ga0137419_119784912	3300012925	Vadose Zone Soil	MAVIAVIAVLLIVLAWFLWPAKDATPSRRERPDVDGAELEAAERDVQEAADEESVRDWGPGSGQKPLP*
Ga0137407_119274722	3300012930	Vadose Zone Soil	MAVIAVIVVLLIVFAWFLWPSNDARPARRERPEIDEAELEAAERDVQEAADEESVRDWGPGSGGQKPLP*
Ga0137410_101726772	3300012944	Vadose Zone Soil	MGLIAGVVVLLVILGWFFWPSKDAPRRDADNAELNAAERDVQEAADDETVRDWGPGTGQKPLP*
Ga0134078_101021562	3300014157	Grasslands Soil	MAVIAVIVVLLIVFAWFLWPSNDARPARRERAEIDEAELEAAERDVQEAADEESVRDWGPGSGQKPPP*
Ga0137420_10789972	3300015054	Vadose Zone Soil	MAVIAVIAVLLIVLAWFLWPGKDVSPARRERPDVDAAELEAAERDVQEAADDESVRDWGPGSGQKPLP*
Ga0137412_100285007	3300015242	Vadose Zone Soil	MGVIAVIAVLLVALGWFLWPSKTATVPRRERADVDEAELEAAERDVQDAADQDSVRDWGPGTGQAP*
Ga0137412_100653672	3300015242	Vadose Zone Soil	MGLVAGVVVLLIILGWFFWPSKEAPRRDAENAELNAAERDVQEAADEETVRDWGPGTGQKPLP*
Ga0134085_100234662	3300015359	Grasslands Soil	MAVIAVIVVLLIVFAWFLWPSDDARPARRERPEIDEAELAAAERDVQEAADEESVRDWGPGSGQKPPP*
Ga0134085_100663882	3300015359	Grasslands Soil	MGLDAGVVVLLIILGWFFWPSKDAGPARRERPERPDVNEAELEAAERDVQEAADEESVRDWGPGTGHKPLP*
Ga0134069_10042474	3300017654	Grasslands Soil	MAVIAVIVVLLIVFAWFLWPSNDARPARRERPEIDEAELEAAERDVQEAADEESVRDWGPGSGQKPPP
Ga0134069_10629201	3300017654	Grasslands Soil	MGVIGVIAVVLIVLAWFLWPAKDTPPAPRDRPDVDEAELGAAERDVQEAADEETVRDWGPGTGQKPLP
Ga0134074_13343592	3300017657	Grasslands Soil	MGIVAVALVLLILLAWFFWPSKGAAQARPARRERPDVDEAELESAERDVQEATDEESVRDWGPGSGQKPLP
Ga0134083_101109741	3300017659	Grasslands Soil	EPRCLMAVIGVIAVVLIVLGWFLWPSKTPPRRDVDNAELAEAERDVQEAADEESIRDWGPGTGQKPLP
Ga0184608_100164622	3300018028	Groundwater Sediment	MAVIAVIAVLLIVLGWFLWPSNAARPARRERPEIDEAELEAAERDVQEAADAESVRDWGPGSGQKPLP
Ga0184621_100070413	3300018054	Groundwater Sediment	MAVIAVIVVLLIVLGWFLWPSNDARPARRERPEIDEAELEAAERDVQEAADAESVRDWGPGSGQKPLP
Ga0184618_101869262	3300018071	Groundwater Sediment	MAVIGFIAVLVIVLGWFLWPSKDVTPPRRERPDVDAAELEAAERDVQEAADDESERDWGPGSGQKPLP
Ga0184609_104507132	3300018076	Groundwater Sediment	MAVIAVIVVLLIVLGWFLWPSNDARPARRERPEIDEAELEAAERDVQEAADEESVRDWGPGSGQKPLP
Ga0066667_113274562	3300018433	Grasslands Soil	MGTVAVIAVLLILLAWFFWPSKAPRPRDVENAELEAAERDVQEAADEESVRDWGPGSGQKPLP
Ga0066669_103644702	3300018482	Grasslands Soil	MAVIAVSAVVLIVLAWFLWPTRDAPPAPRDRPDVDARELEAAERDVQEAADEETVRDWGPGTGQKPLP
Ga0193722_11457902	3300019877	Soil	MGVVAVIVVVLIVLAWFVWPAKAATNARLAQRDRPDVDEAELEAAERDVQEAADEESVRDWGPGTGQKPLP
Ga0193723_10112902	3300019879	Soil	MAVIGIIAVLLIVLVWFLWPTKDPRPARRERPDVDAAELEAAERDVQEAADEESIRDWGPGTGQKPLP
Ga0193723_10125693	3300019879	Soil	MGLVAGVVVLLIVLGWFFWPSKSAPRRDAENAELDAAERDVQEAADEESVRDWGPGAGQKPLP
Ga0193725_10072564	3300019883	Soil	MAVIAVIVVLLIVLGWFLWPSTDARPARRERPEIDEAELEAAERDVQEAADEESVRDWGPGSGQKPLP
Ga0179594_100410742	3300020170	Vadose Zone Soil	MGLVAGVVVLLIILGWFFWPSKDAPHRDAENAELNAAERDVQEAADEETVRDWGPGTGQKPLP
Ga0179594_100844162	3300020170	Vadose Zone Soil	MGVIAVIAVLLVALGWFLWPSTAATVPRRERADVDETELEAAERDVQDAADQDSVRDWGPGTGQAP
Ga0179596_100644091	3300021086	Vadose Zone Soil	MGLVAGVVVLLIILGWFFWPSKDAPRRDAENAELNAAERDVQEAADEETVRDWGPGTGQKPLP
Ga0222625_14170842	3300022195	Groundwater Sediment	MAVIAVIAVLLIVLGWFLWPSNAARPARRERPEIDEAELEAAERDVQEAADEESVRDWGPGSGQKPLP
Ga0222622_108326542	3300022756	Groundwater Sediment	MAVIAVIVVLLIVLGWFLWPSNDARPARRERPEIDEAELEAAERDVQEAADEESVRD
Ga0207653_100839632	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MAVIGVIAVVLIVLAWFLWPSKAHRVPDVENAELEEAEREVQEAPDQESVRDWGPGTGQKPLP
Ga0207684_100643093	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MAVIGVSLVVLIVLAWFLWPSKNAPLSSRDRADVDEQELEAAERDVQEAADDESVRDWGPGTGQKPLP
Ga0210090_10027682	3300025965	Natural And Restored Wetlands	MGTIAIAVVLLGLLAWFFWPTKGSAPARRDTDDIDAAELEAAERDVQEAPDAEHVRDWGPGTGQKPLP
Ga0209438_10010832	3300026285	Grasslands Soil	MAVIGVSAVVLIVLAWFLWPAKNAPPAPRDRPDVDETELEAAERDVQEAADEATVRDWGPGTGQKPLP
Ga0209468_10361052	3300026306	Soil	MAVIAVIVVLLIVFAWFLWPSNDARPARRERPEIDEAELAAAERDVQEAADEESVRDWGPGSGQKPPP
Ga0209469_10105383	3300026307	Soil	MAVIAVIVVLLIVFAWFLCPSNDARPARRERPEIDEAELEAAERDVQEAADEESVRDWGPGSGQKPPP
Ga0209761_10457052	3300026313	Grasslands Soil	MAVIGVVAVLLIVLVWFLWPSTDAGPARRERPDVDAAELEAAERDVQEAADEESVRDWGPGTGQKPLP
Ga0209647_11556161	3300026319	Grasslands Soil	VSAVVLIVLAWFLWPAKNAPPAPRDRPDVDETELEAAERDVQEAADEATVRDWGPGTGQKPLP
Ga0209131_10660962	3300026320	Grasslands Soil	MAVIGVSAVVLIVLTWFLWPAKNAPPAPRDRPDVDETELEAAERDVQEAADEATVRDWGPGTGQKPLP
Ga0209131_12350742	3300026320	Grasslands Soil	MGLVAGVVVLLIILGWFFWPSKDAPHRDAENAELNAAERDVREAADEETVRDWGPGTGQKPLP
Ga0209472_10441012	3300026323	Soil	MAVIAVIVVLLIVFAWFLWPSNDARPARRPEIDEAELEAAERDVQEAADEESVRDWGPGSGQKPPP
Ga0209470_10577572	3300026324	Soil	MGVVAVSVVVLIVLAWFLWPANATNAGQPQRDRPDVDEAELEAAERDVQEAVDEESVRDWGPGTGQKPLP
Ga0209375_12586321	3300026329	Soil	MAVIAVIVVLLIVFAWFLWPSNDARPARRERPEIDEAELAAAERDVQEAADEESGRDWGPGSGQKPPP
Ga0209159_10185544	3300026343	Soil	MAVIAVIVVLLIVFAWFLWPSDDARPARRERPEIDEAELAAAERDVQEAADEESVRDWGPGSGQKPPP
Ga0209378_10340202	3300026528	Soil	MGTVAVIAVLLILLAWFFWPSQAPRPRDFENAELEAAERDVQEAADEESVRDWGPGSGQKPLP
Ga0209157_10577532	3300026537	Soil	MGLVAGVVVLLIILGWFFWPSKDAAAARRERPDVDESELETAERDVQEAADEESVRDWGPGTGQKPLP
Ga0209157_10999662	3300026537	Soil	MAVIGVIAVVLIVLGWFLWPSKTPPRRDVDNAELAEAERDVQEAADEESIRDWGPGTGQKPLP
Ga0209056_100031262	3300026538	Soil	MGTVAVIAVLLILLAWFFWPSKAPRPRDFENAELEAAERDVQEAADEESVRDWGPGSGQKPLP
Ga0209056_101197692	3300026538	Soil	MGTVAVIAVLLILLAWFFWPSQAPRPRDFENAELEAAERDVQEAADEESVRDWGPGSGQKQLP
Ga0179593_12015132	3300026555	Vadose Zone Soil	MGVIAVIAVLLVALGWFLWPSKTATVPRRERADVDEAELEAAERDVQDAADQDSVRDWGPGTGQAP
Ga0209076_10249742	3300027643	Vadose Zone Soil	MAVIGIIAVLLIVLVWFLWPSKDAGPARRERPDVDAAELEAAERDVQEAADEESVRDWGPGSGQRPLP
Ga0209076_10438932	3300027643	Vadose Zone Soil	MGLIAGVVVLLIVLGWFFWPSKTVPRHDVENTELDAAERDVREAADEDSVRDWGPGTGQKPLP
Ga0209388_11781822	3300027655	Vadose Zone Soil	KREVREEPRCLMGLVAGVVVLLIILGWFFWPSKDAPHRDAENAELNAAERDVQEAADEETVRDWGPGTGQKPLP
Ga0209588_10022273	3300027671	Vadose Zone Soil	MAIIAVTAVLLIVLAWFLWPSRAATAARQMRRERPDVDEAELEAAERDVQEAADEESVRDWGPGSGQKPLP
Ga0209177_100369782	3300027775	Agricultural Soil	MAVIGVSVVVLIVLAWFLWPSKHAPPSSRDRPDIDERELEAAERDVQEAADEESVRDWGPGTGQKPLP
Ga0209590_103545122	3300027882	Vadose Zone Soil	MAVIAVIGVLLIGLAWFLWPSRAPTTAGPARRERPDVDAAELEAAERDVQEAADEESVRDWGPGSGQKPLP
Ga0209488_100085342	3300027903	Vadose Zone Soil	MATVAVIAVLVIVLAWFFWPSKTAPRRNVDNAELDAAERDVQEAADQDSVKDWGPGSGQKPLP
Ga0137415_1000235716	3300028536	Vadose Zone Soil	MGLIAGVVVLLIVLGWFFWPSRAAPRHDVENTELDAAERDVREAADEDSVRDWGPGTGQKPLP
Ga0137415_100150624	3300028536	Vadose Zone Soil	MAVIAVIAVLLIVLAWFLWPGKDISPARRERPDVDAAELEAAERDVQEAADDESVRDWGPGSGQKPLP
Ga0307312_107196691	3300028828	Soil	MAVIGIIAVLLIVLVWFLWPTKDPRPARRERPDVDAAELEAAERDVQEAADEESIRDWGPGTGQK
Ga0307278_100987962	3300028878	Soil	REEPRCLMGLVAGVVVLLIILGWFFWPSKDAPHRDEENAELDAAERDVQEAADEESVRDWGPGSGQKPLP
Ga0307501_100766222	3300031152	Soil	MAVIGVSVVVLIVLAWFLWPSKDAPPAPRDRPDVDEQELEAAERDVQEAADEETVRDWGPGTGQKPLP
Ga0308179_10484932	3300031424	Soil	MAVIAVIAVLLIVLGWFLWPSNAARPARRERPEIDEAELEAAERDVQEAADEESVRDW
Ga0364934_0055630_376_591	3300034178	Sediment	MAIVAIIAALLIILAWFLWPSKTAANASPARRERPGVDEAELEAAERDVQESPDEESVRDWGPGSGKKPLP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F036193

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences