Metagenome / Metatranscriptome Family F036407

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F036407
Family Type	Metagenome / Metatranscriptome
Number of Sequences	170
Average Sequence Length	41 residues
Representative Sequence	MAQVIEFYIPARFKQKVKWIPPEQRGKIIAFPTDLKKSA
Number of Associated Samples	126
Number of Associated Scaffolds	170

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	82.94 %
% of genes near scaffold ends (potentially truncated)	20.59 %
% of genes from short scaffolds (< 2000 bps)	75.88 %
Associated GOLD sequencing projects	115
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.19

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (74.118 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (13.529 % of family members)
Environment Ontology (ENVO)	Unclassified (34.706 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.353 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 4.48% β-sheet: 0.00% Coil/Unstructured: 95.52%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.19
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.19
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 170 Family Scaffolds
PF05193	Peptidase_M16_C	10.00
PF03544	TonB_C	8.24
PF02954	HTH_8	2.94
PF00158	Sigma54_activat	2.35
PF03729	DUF308	1.76
PF04264	YceI	1.76
PF00990	GGDEF	1.76
PF06202	GDE_C	1.18
PF00115	COX1	1.18
PF00753	Lactamase_B	1.18
PF00106	adh_short	0.59
PF11066	DUF2867	0.59
PF13470	PIN_3	0.59
PF00989	PAS	0.59
PF13477	Glyco_trans_4_2	0.59
PF13561	adh_short_C2	0.59
PF13432	TPR_16	0.59
PF11752	DUF3309	0.59
PF00571	CBS	0.59
PF07228	SpoIIE	0.59
PF00174	Oxidored_molyb	0.59
PF13186	SPASM	0.59
PF01451	LMWPc	0.59
PF00486	Trans_reg_C	0.59
PF13620	CarboxypepD_reg	0.59
PF01494	FAD_binding_3	0.59
PF04389	Peptidase_M28	0.59
PF01149	Fapy_DNA_glyco	0.59
PF17152	CHASE8	0.59
PF01161	PBP	0.59
PF02321	OEP	0.59
PF01058	Oxidored_q6	0.59
PF13520	AA_permease_2	0.59
PF04253	TFR_dimer	0.59
PF03061	4HBT	0.59

COG ID	Name	Functional Category	% Frequency in 170 Family Scaffolds
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	8.24
COG2353	Polyisoprenoid-binding periplasmic protein YceI	General function prediction only [R]	1.76
COG3247	Acid resistance membrane protein HdeD, DUF308 family	General function prediction only [R]	1.76
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.18
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	1.18
COG3408	Glycogen debranching enzyme (alpha-1,6-glucosidase)	Carbohydrate transport and metabolism [G]	1.18
COG0266	Formamidopyrimidine-DNA glycosylase	Replication, recombination and repair [L]	0.59
COG0377	NADH:ubiquinone oxidoreductase 20 kD subunit (chain B) or related Fe-S oxidoreductase	Energy production and conversion [C]	0.59
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.59
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.59
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	0.59
COG1740	Ni,Fe-hydrogenase I small subunit	Energy production and conversion [C]	0.59
COG1881	Uncharacterized conserved protein, phosphatidylethanolamine-binding protein (PEBP) family	General function prediction only [R]	0.59
COG1941	Coenzyme F420-reducing hydrogenase, gamma subunit	Energy production and conversion [C]	0.59
COG2041	Molybdopterin-dependent catalytic subunit of periplasmic DMSO/TMAO and protein-methionine-sulfoxide reductases	Energy production and conversion [C]	0.59
COG3260	Ni,Fe-hydrogenase III small subunit	Energy production and conversion [C]	0.59
COG3915	Uncharacterized conserved protein	Function unknown [S]	0.59

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	74.12 %
Unclassified	root	N/A	25.88 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	74.12 %
Unclassified	root	N/A	25.88 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	74.12 %
Unclassified	root	N/A	25.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	38.24 %
Unclassified	root	N/A	25.88 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.59 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.88 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	17.06 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	5.29 %
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	0.59 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.88 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	17.06 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.29 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	0.59 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.88 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	16.47 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.29 %
Nitrospiraceae	family	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	0.59 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.29 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	2.35 %
Nitrospira	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	0.59 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.29 %
Acidobacteriaceae bacterium KBS 83	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	2.35 %
unclassified Nitrospira	no rank	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira	0.59 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.29 %
Acidobacteriaceae bacterium KBS 83	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	2.35 %
Nitrospira sp.	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.	0.59 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.59 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908043\|A2_c1_ConsensusfromContig72252	Not Available	692	Open in IMG/M
2199352024\|deeps__Contig_160151	Not Available	582	Open in IMG/M
3300001545\|JGI12630J15595_10098839	All Organisms → cellular organisms → Bacteria → Acidobacteria	574	Open in IMG/M
3300001593\|JGI12635J15846_10672727	Not Available	598	Open in IMG/M
3300001686\|C688J18823_10025550	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4010	Open in IMG/M
3300002245\|JGIcombinedJ26739_100365695	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1323	Open in IMG/M
3300002245\|JGIcombinedJ26739_100810436	All Organisms → cellular organisms → Bacteria	817	Open in IMG/M
3300002245\|JGIcombinedJ26739_100892788	All Organisms → cellular organisms → Bacteria	771	Open in IMG/M
3300002568\|C688J35102_120280553	All Organisms → cellular organisms → Bacteria	965	Open in IMG/M
3300002910\|JGI25615J43890_1021999	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1052	Open in IMG/M
3300004479\|Ga0062595_100000460	All Organisms → cellular organisms → Bacteria	7638	Open in IMG/M
3300004479\|Ga0062595_100024995	All Organisms → cellular organisms → Bacteria → Acidobacteria	2346	Open in IMG/M
3300004479\|Ga0062595_101375409	Not Available	641	Open in IMG/M
3300004479\|Ga0062595_102256654	All Organisms → cellular organisms → Bacteria → Acidobacteria	535	Open in IMG/M
3300005171\|Ga0066677_10386846	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.	800	Open in IMG/M
3300005174\|Ga0066680_10032251	All Organisms → cellular organisms → Bacteria	2974	Open in IMG/M
3300005175\|Ga0066673_10020408	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3040	Open in IMG/M
3300005175\|Ga0066673_10068713	All Organisms → cellular organisms → Bacteria	1834	Open in IMG/M
3300005177\|Ga0066690_10906410	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300005181\|Ga0066678_10241236	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1166	Open in IMG/M
3300005293\|Ga0065715_10667242	Not Available	656	Open in IMG/M
3300005332\|Ga0066388_100930842	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1443	Open in IMG/M
3300005332\|Ga0066388_105550654	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	639	Open in IMG/M
3300005332\|Ga0066388_105793635	Not Available	625	Open in IMG/M
3300005332\|Ga0066388_107357038	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	553	Open in IMG/M
3300005434\|Ga0070709_10208844	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1387	Open in IMG/M
3300005436\|Ga0070713_102270505	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	525	Open in IMG/M
3300005437\|Ga0070710_10747360	Not Available	694	Open in IMG/M
3300005439\|Ga0070711_100780592	Not Available	809	Open in IMG/M
3300005445\|Ga0070708_100008386	All Organisms → cellular organisms → Bacteria	8297	Open in IMG/M
3300005446\|Ga0066686_10043503	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2707	Open in IMG/M
3300005467\|Ga0070706_102016595	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	522	Open in IMG/M
3300005471\|Ga0070698_100225469	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1807	Open in IMG/M
3300005536\|Ga0070697_100293839	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1396	Open in IMG/M
3300005602\|Ga0070762_10391054	Not Available	894	Open in IMG/M
3300005602\|Ga0070762_10850794	Not Available	619	Open in IMG/M
3300005610\|Ga0070763_10085921	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1564	Open in IMG/M
3300005610\|Ga0070763_10293954	Not Available	891	Open in IMG/M
3300005614\|Ga0068856_100593429	All Organisms → cellular organisms → Bacteria	1129	Open in IMG/M
3300005764\|Ga0066903_100270550	All Organisms → cellular organisms → Bacteria → Acidobacteria	2650	Open in IMG/M
3300005764\|Ga0066903_102058785	All Organisms → cellular organisms → Bacteria	1098	Open in IMG/M
3300005841\|Ga0068863_102501549	All Organisms → cellular organisms → Bacteria → Acidobacteria	526	Open in IMG/M
3300005993\|Ga0080027_10085195	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1173	Open in IMG/M
3300006028\|Ga0070717_10689175	All Organisms → cellular organisms → Bacteria → Acidobacteria	928	Open in IMG/M
3300006034\|Ga0066656_10172748	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1364	Open in IMG/M
3300006050\|Ga0075028_100001215	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9367	Open in IMG/M
3300006050\|Ga0075028_100320575	All Organisms → cellular organisms → Bacteria	868	Open in IMG/M
3300006050\|Ga0075028_100380330	All Organisms → cellular organisms → Bacteria → Acidobacteria	803	Open in IMG/M
3300006050\|Ga0075028_100996700	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	521	Open in IMG/M
3300006059\|Ga0075017_100799941	All Organisms → cellular organisms → Bacteria	729	Open in IMG/M
3300006162\|Ga0075030_100043075	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3800	Open in IMG/M
3300006172\|Ga0075018_10419661	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	684	Open in IMG/M
3300006175\|Ga0070712_100869956	Not Available	776	Open in IMG/M
3300006175\|Ga0070712_101251839	Not Available	646	Open in IMG/M
3300006176\|Ga0070765_100001848	All Organisms → cellular organisms → Bacteria	13121	Open in IMG/M
3300006176\|Ga0070765_100747071	All Organisms → cellular organisms → Bacteria	924	Open in IMG/M
3300009038\|Ga0099829_10006312	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7313	Open in IMG/M
3300009038\|Ga0099829_10863990	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	751	Open in IMG/M
3300009088\|Ga0099830_10100073	All Organisms → cellular organisms → Bacteria → Acidobacteria	2162	Open in IMG/M
3300009089\|Ga0099828_10606085	All Organisms → cellular organisms → Bacteria	986	Open in IMG/M
3300009098\|Ga0105245_10386762	All Organisms → cellular organisms → Bacteria → Acidobacteria	1394	Open in IMG/M
3300009792\|Ga0126374_10145296	All Organisms → cellular organisms → Bacteria	1428	Open in IMG/M
3300010046\|Ga0126384_10338204	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1250	Open in IMG/M
3300010046\|Ga0126384_10588753	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	972	Open in IMG/M
3300010047\|Ga0126382_10769781	Not Available	817	Open in IMG/M
3300010048\|Ga0126373_10042683	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3999	Open in IMG/M
3300010048\|Ga0126373_10109003	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2574	Open in IMG/M
3300010048\|Ga0126373_11484606	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	743	Open in IMG/M
3300010048\|Ga0126373_13047746	Not Available	522	Open in IMG/M
3300010358\|Ga0126370_10041096	All Organisms → cellular organisms → Bacteria	2872	Open in IMG/M
3300010358\|Ga0126370_10208398	All Organisms → cellular organisms → Bacteria	1483	Open in IMG/M
3300010358\|Ga0126370_12177168	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	546	Open in IMG/M
3300010359\|Ga0126376_12716865	Not Available	544	Open in IMG/M
3300010360\|Ga0126372_10116079	All Organisms → cellular organisms → Bacteria	2055	Open in IMG/M
3300010360\|Ga0126372_11032779	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	836	Open in IMG/M
3300010366\|Ga0126379_10000489	All Organisms → cellular organisms → Bacteria	21859	Open in IMG/M
3300010366\|Ga0126379_10791268	All Organisms → cellular organisms → Bacteria	1047	Open in IMG/M
3300010375\|Ga0105239_10341357	Not Available	1690	Open in IMG/M
3300010376\|Ga0126381_100153003	All Organisms → cellular organisms → Bacteria	3031	Open in IMG/M
3300010376\|Ga0126381_100770992	All Organisms → cellular organisms → Bacteria → Acidobacteria	1379	Open in IMG/M
3300010401\|Ga0134121_13053139	Not Available	515	Open in IMG/M
3300010857\|Ga0126354_1042128	Not Available	522	Open in IMG/M
3300011270\|Ga0137391_10223822	All Organisms → cellular organisms → Bacteria	1634	Open in IMG/M
3300011270\|Ga0137391_10285876	All Organisms → cellular organisms → Bacteria	1424	Open in IMG/M
3300011270\|Ga0137391_10518608	All Organisms → cellular organisms → Bacteria	1007	Open in IMG/M
3300011270\|Ga0137391_10909430	Not Available	720	Open in IMG/M
3300012189\|Ga0137388_10638819	All Organisms → cellular organisms → Bacteria	989	Open in IMG/M
3300012189\|Ga0137388_10815926	All Organisms → cellular organisms → Bacteria	864	Open in IMG/M
3300012189\|Ga0137388_11264535	Not Available	676	Open in IMG/M
3300012202\|Ga0137363_10396018	All Organisms → cellular organisms → Bacteria	1150	Open in IMG/M
3300012208\|Ga0137376_11511178	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300012209\|Ga0137379_10479743	All Organisms → cellular organisms → Bacteria	1152	Open in IMG/M
3300012209\|Ga0137379_10678324	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	936	Open in IMG/M
3300012363\|Ga0137390_10072988	All Organisms → cellular organisms → Bacteria	3364	Open in IMG/M
3300012685\|Ga0137397_10196916	All Organisms → cellular organisms → Bacteria	1498	Open in IMG/M
3300012924\|Ga0137413_10495943	All Organisms → cellular organisms → Bacteria → Acidobacteria	897	Open in IMG/M
3300012930\|Ga0137407_10000974	All Organisms → cellular organisms → Bacteria	18814	Open in IMG/M
3300012930\|Ga0137407_10563366	All Organisms → cellular organisms → Bacteria	1067	Open in IMG/M
3300012958\|Ga0164299_10168573	All Organisms → cellular organisms → Bacteria → Acidobacteria	1232	Open in IMG/M
3300012984\|Ga0164309_10833684	Not Available	745	Open in IMG/M
3300013297\|Ga0157378_10214164	All Organisms → cellular organisms → Bacteria	1828	Open in IMG/M
3300014969\|Ga0157376_11308139	Not Available	755	Open in IMG/M
3300015087\|Ga0167637_1014320	All Organisms → cellular organisms → Bacteria → Acidobacteria	1161	Open in IMG/M
3300017792\|Ga0163161_11561005	Not Available	581	Open in IMG/M
3300017966\|Ga0187776_11043540	Not Available	603	Open in IMG/M
3300017993\|Ga0187823_10010341	All Organisms → cellular organisms → Bacteria → Acidobacteria	2215	Open in IMG/M
3300018468\|Ga0066662_10054807	All Organisms → cellular organisms → Bacteria	2566	Open in IMG/M
3300018482\|Ga0066669_10237457	All Organisms → cellular organisms → Bacteria → Acidobacteria	1430	Open in IMG/M
3300019887\|Ga0193729_1226298	All Organisms → cellular organisms → Bacteria → Acidobacteria	615	Open in IMG/M
3300019888\|Ga0193751_1030060	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2556	Open in IMG/M
3300019888\|Ga0193751_1033418	All Organisms → cellular organisms → Bacteria	2380	Open in IMG/M
3300020199\|Ga0179592_10390060	All Organisms → cellular organisms → Bacteria → Acidobacteria	609	Open in IMG/M
3300020579\|Ga0210407_10071340	All Organisms → cellular organisms → Bacteria → Acidobacteria	2609	Open in IMG/M
3300020583\|Ga0210401_10123263	All Organisms → cellular organisms → Bacteria	2430	Open in IMG/M
3300021080\|Ga0210382_10545981	Not Available	514	Open in IMG/M
3300021171\|Ga0210405_10129247	All Organisms → cellular organisms → Bacteria	1996	Open in IMG/M
3300021344\|Ga0193719_10012453	All Organisms → cellular organisms → Bacteria	3581	Open in IMG/M
3300021401\|Ga0210393_11115072	Not Available	637	Open in IMG/M
3300021406\|Ga0210386_11475674	Not Available	568	Open in IMG/M
3300021407\|Ga0210383_11115009	All Organisms → cellular organisms → Bacteria → Acidobacteria	666	Open in IMG/M
3300021420\|Ga0210394_10848258	All Organisms → cellular organisms → Bacteria → Acidobacteria	796	Open in IMG/M
3300021432\|Ga0210384_10786075	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	849	Open in IMG/M
3300021478\|Ga0210402_11233682	Not Available	675	Open in IMG/M
3300021560\|Ga0126371_10023440	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5714	Open in IMG/M
3300021560\|Ga0126371_13275633	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300024288\|Ga0179589_10438981	Not Available	601	Open in IMG/M
3300025509\|Ga0208848_1042981	All Organisms → cellular organisms → Bacteria	972	Open in IMG/M
3300025900\|Ga0207710_10057399	All Organisms → cellular organisms → Bacteria → Acidobacteria	1758	Open in IMG/M
3300025906\|Ga0207699_10398185	All Organisms → cellular organisms → Bacteria	980	Open in IMG/M
3300025910\|Ga0207684_10003772	All Organisms → cellular organisms → Bacteria	14644	Open in IMG/M
3300025915\|Ga0207693_10617786	Not Available	843	Open in IMG/M
3300025916\|Ga0207663_10505310	Not Available	939	Open in IMG/M
3300025927\|Ga0207687_10434430	All Organisms → cellular organisms → Bacteria → Acidobacteria	1086	Open in IMG/M
3300025961\|Ga0207712_12131499	Not Available	501	Open in IMG/M
3300026281\|Ga0209863_10055371	All Organisms → cellular organisms → Bacteria	1176	Open in IMG/M
3300026304\|Ga0209240_1055869	All Organisms → cellular organisms → Bacteria	1482	Open in IMG/M
3300026312\|Ga0209153_1005001	All Organisms → cellular organisms → Bacteria → Acidobacteria	4144	Open in IMG/M
3300026351\|Ga0257170_1028809	Not Available	746	Open in IMG/M
3300026514\|Ga0257168_1000586	All Organisms → cellular organisms → Bacteria → Proteobacteria	3908	Open in IMG/M
3300026551\|Ga0209648_10019147	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5984	Open in IMG/M
3300027651\|Ga0209217_1046927	All Organisms → cellular organisms → Bacteria	1312	Open in IMG/M
3300027651\|Ga0209217_1180363	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	575	Open in IMG/M
3300027660\|Ga0209736_1155714	Not Available	606	Open in IMG/M
3300027727\|Ga0209328_10100951	All Organisms → cellular organisms → Bacteria	882	Open in IMG/M
3300027846\|Ga0209180_10060282	All Organisms → cellular organisms → Bacteria	2109	Open in IMG/M
3300027874\|Ga0209465_10589921	Not Available	551	Open in IMG/M
3300027884\|Ga0209275_10463783	Not Available	719	Open in IMG/M
3300027889\|Ga0209380_10009668	All Organisms → cellular organisms → Bacteria	5647	Open in IMG/M
3300027894\|Ga0209068_10000083	All Organisms → cellular organisms → Bacteria	56073	Open in IMG/M
3300027894\|Ga0209068_10015578	All Organisms → cellular organisms → Bacteria → Acidobacteria	3657	Open in IMG/M
3300027894\|Ga0209068_10372095	All Organisms → cellular organisms → Bacteria → Acidobacteria	811	Open in IMG/M
3300027910\|Ga0209583_10782950	Not Available	506	Open in IMG/M
3300028047\|Ga0209526_10215331	All Organisms → cellular organisms → Bacteria	1325	Open in IMG/M
3300028047\|Ga0209526_10357231	All Organisms → cellular organisms → Bacteria	978	Open in IMG/M
3300029636\|Ga0222749_10039143	All Organisms → cellular organisms → Bacteria	2051	Open in IMG/M
3300030991\|Ga0073994_10051369	Not Available	1423	Open in IMG/M
3300031231\|Ga0170824_125874587	All Organisms → cellular organisms → Bacteria → Acidobacteria	1028	Open in IMG/M
3300031474\|Ga0170818_101706552	All Organisms → cellular organisms → Bacteria → Acidobacteria	670	Open in IMG/M
3300031708\|Ga0310686_108813543	Not Available	1343	Open in IMG/M
3300031720\|Ga0307469_10015587	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3938	Open in IMG/M
3300031720\|Ga0307469_11415301	Not Available	663	Open in IMG/M
3300031753\|Ga0307477_10021465	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4411	Open in IMG/M
3300031753\|Ga0307477_10208672	All Organisms → cellular organisms → Bacteria	1358	Open in IMG/M
3300031754\|Ga0307475_10346390	All Organisms → cellular organisms → Bacteria	1194	Open in IMG/M
3300031754\|Ga0307475_10489778	All Organisms → cellular organisms → Bacteria	987	Open in IMG/M
3300031771\|Ga0318546_10935550	Not Available	610	Open in IMG/M
3300032180\|Ga0307471_101214048	All Organisms → cellular organisms → Bacteria	918	Open in IMG/M
3300032205\|Ga0307472_100931860	Not Available	807	Open in IMG/M
3300032205\|Ga0307472_102236187	Not Available	552	Open in IMG/M
3300032770\|Ga0335085_10000642	All Organisms → cellular organisms → Bacteria	92819	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.53%
Host-Associated	Host-Associated	6.47%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.88%
Aquatic	Environmental → Aquatic	7.65%
Plants	Host-Associated → Plants	6.47%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	85.88%
Sediment	Environmental → Aquatic → Sediment	6.47%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.12%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.35%
Freshwater	Environmental → Aquatic → Freshwater	1.18%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	56.47%
Loam	Environmental → Terrestrial → Soil → Loam	27.06%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.47%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.12%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.35%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.76%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.59%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.59%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.59%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	31.76%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	15.29%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	14.71%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.82%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.47%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.47%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.12%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.94%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.35%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.76%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.18%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.18%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.18%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.59%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.59%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.59%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	13.53%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	11.76%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.24%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	6.47%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	6.47%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.29%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.12%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.12%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.53%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.94%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.35%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.18%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	1.18%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.18%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.18%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.18%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.59%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.59%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.59%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.59%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.59%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.59%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.59%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.59%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.59%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.59%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.59%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.59%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.59%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908043	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active Layer A2	Environmental	Open in IMG/M
2199352024	Bare-fallow DEEP SOIL	Environmental	Open in IMG/M
3300001545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300002910	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005993	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010857	Boreal forest soil eukaryotic communities from Alaska, USA - W1-3 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015087	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G6A, Proglacial plain, adjacent to northern proglacial tributary)	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017993	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025509	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026281	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046 (SPAdes)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300026351	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-05-B	Environmental	Open in IMG/M
3300026514	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027660	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027727	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030991	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
A2_c1_00227280	2124908043	Soil	MAQVIEFYIPARFKPKVKWIPLEQRGKILAFPVDLKKSA
deeps_02948310	2199352024	Soil	RVWRDRRMAMAQVIEFYIPSRFKSRVKWIPSERRGRVLAFPTAIKKSA
JGI12630J15595_100988392	3300001545	Forest Soil	GRVMAQVIEFYIPERFKVKVKWIPAEQRGKIITFPTDLKKSA*
JGI12635J15846_106727272	3300001593	Forest Soil	MAQVIEFYIPTRFKPKVKWVPVAQRGKIIVFPTDLKKSA*
C688J18823_100255504	3300001686	Soil	MMKLWRVWRDRRMAMAQVIEFYIPSRFKPRVKWIPSDRRGRVIAFPAAIKKSA*
JGIcombinedJ26739_1003656952	3300002245	Forest Soil	MAQVIEFYIPERFKVKVKWXPAEQRGKIITFPTDLKKSA*
JGIcombinedJ26739_1008104362	3300002245	Forest Soil	MAQVIEFYIPARFKQKVKWIPPEQRGKIIAFPTDLKKSA*
JGIcombinedJ26739_1008927882	3300002245	Forest Soil	MAQVIEFYIPARFKPKVKWVPVEQRGKILVFPAELKKSA*
C688J35102_1202805532	3300002568	Soil	MAQVIEFYIPSRFKAKVKWIPLEQRGKIIAFPIDFKKSA*
JGI25615J43890_10219992	3300002910	Grasslands Soil	MARVIEFYIPARFKPKAKREIQEQRGKVIAFPSDLKKPA*
Ga0062595_1000004606	3300004479	Soil	MAQVIEFYIPTRFQRRMKWVPPTQRGKILQFPGELKKSA*
Ga0062595_1000249952	3300004479	Soil	MAQVIEFYIPARFKPKVKWVPLEQRGKILLFSADLKKSA*
Ga0062595_1013754092	3300004479	Soil	VILQYEGWTAVDRRMVMAEVIEFYIPARFKQKVRWIPPEQRGKVIAFPTELKKSA*
Ga0062595_1022566542	3300004479	Soil	MAQVIEFYIPTRFKPKVRWIPAEQRGKLLAFPTDLKKSA*
Ga0066677_103868461	3300005171	Soil	MAHVIEFYIPARFNTKPKGVTQEKRGKVIAFPSDRKKSA*
Ga0066680_100322514	3300005174	Soil	MAHVIEFYIPARFSTKPKGVTQEKRGKVIAFPSDRKKSA*
Ga0066673_100204082	3300005175	Soil	MAQVIEFYIPASFKRKVKWIPAEQRGKIIFFPSDLKKSA*
Ga0066673_100687134	3300005175	Soil	DRRGDMAQVIEFYIPTRFQRRMKWVPPTQRGKILQFPGELKKSA*
Ga0066690_109064102	3300005177	Soil	ETCLIALDRRVVMAQVIEFYVPAKFHKKVKWVPPEQRGRMIEFPAEIKKSA*
Ga0066678_102412362	3300005181	Soil	MAYVIEFYIPARFSTKPKGVTQEKRGKVIAFPSDRKKSA*
Ga0065715_106672421	3300005293	Miscanthus Rhizosphere	MMEEVRWTAVDRRMVMAQVIEFYIPARFKPKVKWVPLEQRGKILLFSADLKKSA*
Ga0066388_1009308422	3300005332	Tropical Forest Soil	MAQVIEFYIPERFKKRVKWVPAENRGKVLSFPVDIKKTA*
Ga0066388_1055506541	3300005332	Tropical Forest Soil	MLFRIRGFMAQVIEFYIPTRFKQKVKWIPPQERGKIIDSPSQLNKWA*
Ga0066388_1057936351	3300005332	Tropical Forest Soil	MAQVIEFYVPARFQRKVKWIPPTQRGKILQFPGELKRSA*
Ga0066388_1073570381	3300005332	Tropical Forest Soil	MAQVIEFYIPTRFKQKVKWVPPEQRGKIIDFPSDLKKSA*
Ga0070709_102088442	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MAEVIEFYIPARFKQKVRWIPPEQRGKVIAFPTELKKSA*
Ga0070713_1022705051	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MVMAEVIEFYIPARFKQKVRWIPPEQRGKVIAFPTELKKSA*
Ga0070710_107473602	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MMEEVRWTAVDRRMVMAQVIEFYIPARFKPKVKWVPLEQRGKILLFSTDLKKSA*
Ga0070711_1007805921	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MAQVIEFYIPARFKPRMKWIPPEQRGKIITFPTDLKKSA*
Ga0070708_1000083862	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MAQVIEFYIPASFKSKVKWIPPEQRGKVITFPTDLKKSA*
Ga0066686_100435034	3300005446	Soil	MAHVIEFYIPARFKTKPKGVTQEQRGKVIAFPSDRKKSA*
Ga0070706_1020165951	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VAHVIEFYIPARFKTKPKGVTQEQRGKVIAFPSDRKKSA*
Ga0070698_1002254692	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VAHVIEFYIPARFKTKPKGVTQEQRGKVIAFPADRKKSA*
Ga0070697_1002938391	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MMEEVRWTAVDRRMVMAQVIEFYIPARFKPKVKWLPLEQRGKIILFPTDLKKSA*
Ga0070762_103910542	3300005602	Soil	MAHVIEFYIPARFKTKPNGATQEQREKVIAFPSDRKKSA*
Ga0070762_108507941	3300005602	Soil	MAPVIEFYIPARFKPKVKWVPQEQPEKVIAFPSDLKKSA*
Ga0070763_100859213	3300005610	Soil	MAPVIEFYIPARFKPKVKWVPQEQREQVIAFPSDLKKSA*
Ga0070763_102939541	3300005610	Soil	MAHVIQFYIPTRFKQKVKWVPQEQRGKIIAFPSDLKKSA*
Ga0068856_1005934292	3300005614	Corn Rhizosphere	MAQVIEFYIPSRFKAKEKWIPLEQRGKIIAFPIDFKKSA*
Ga0066903_1002705502	3300005764	Tropical Forest Soil	MAQVIEFYIPARFQRRVKWVPPAQRGKILQFPGELKKSA*
Ga0066903_1020587852	3300005764	Tropical Forest Soil	MALVIEFYIPKRFKQKVKWVPPQERGKIIDFPSDLKKSA*
Ga0068863_1025015492	3300005841	Switchgrass Rhizosphere	MAQVIEFYIPSRFKAKVKWIPLEQRGKVIAFPIDFKKSA*
Ga0080027_100851952	3300005993	Prmafrost Soil	MAQVIEYYIPTRFKPKAKWVPAEQRGKIIVFPTDLKKSA*
Ga0070717_106891751	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VDRRMVMAEVIEFYIPARFKQKVRWIPPEQRGKVIAFPTELKKSA*
Ga0066656_101727482	3300006034	Soil	MAHVIVFYIPARFKTKPKGVTQEQRGKVIAFPSDRKKSA*
Ga0075028_1000012154	3300006050	Watersheds	MAQVIEFYIPARFKSKVKWIPLEQRGKILSFPADLKKSA*
Ga0075028_1003205752	3300006050	Watersheds	MAQVIEFYIPARFKPKVKWIPLEQRGKILAFPVDLKKSA*
Ga0075028_1003803302	3300006050	Watersheds	MAQVIEFYIPATFKQKVKWIPPEQRGKIISFPADLKKSA*
Ga0075028_1009967001	3300006050	Watersheds	MAQVIEFYIPSRFKVKVKWIPLEQRGKIIAFPVDFKKSA*
Ga0075017_1007999411	3300006059	Watersheds	EYYIPTRFKPKVKWVPAEQRGKIIVFPTDLKKSA*
Ga0075030_1000430754	3300006162	Watersheds	MAQLIEFYIPARFKPKVKWVPVEQRGKIIAFPTDLKKSA*
Ga0075018_104196611	3300006172	Watersheds	MMKEAKRAAVDRRMVMAQVIEFYIPSRFKPKIKWVSMEQRGKIIAFPTDLKKSA*
Ga0070712_1008699562	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MAQVIEFYIPARFKPRIKWIPPEQRGKIITFPTDLKKSA*
Ga0070712_1012518391	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MMEEVRWTAVDRRMVMAQVIEFYIPTRFKPKVKWIPVEQRGRIIAFPADLKKSA*
Ga0070765_1000018483	3300006176	Soil	MAWEIEFHVPTSFKPKAKWVPQDQRGKIIAFTPDLKKSA*
Ga0070765_1007470712	3300006176	Soil	MDRRMVMAQVIEFYIPARFKQKVKWIPPEQRGKIIAFPTDLKKSA*
Ga0099829_100063122	3300009038	Vadose Zone Soil	MAQVIEFYIPARFKPKVKWMPLEQRGKILWFPADLKKSA*
Ga0099829_108639902	3300009038	Vadose Zone Soil	MAQVIEFYIPTRFKPKVKWTPPEQRGKILAFAADLKKSA*
Ga0099830_101000732	3300009088	Vadose Zone Soil	MAQVIEFYIPARFKPKVKWIPLEQRGKILWFPADLKKSA*
Ga0099828_106060852	3300009089	Vadose Zone Soil	MAHVIEFYIPARFKTKPKGVTQEQRGKVIAFTSYRKKSA*
Ga0105245_103867621	3300009098	Miscanthus Rhizosphere	MAQVIEFYIPARFKPKVKWIPPEQRGKILAFPVDLKKSA*
Ga0126374_101452961	3300009792	Tropical Forest Soil	MAQVIEFYIPTRFKQKVKWVPQGQRGRIIAFRSDFKKS
Ga0126384_103382042	3300010046	Tropical Forest Soil	MAQVIEFYIPARFKQKVKWVPPEQRGKIIDFPSDLKKSA*
Ga0126384_105887531	3300010046	Tropical Forest Soil	VRLFRRSEDVMAQVIEFYIPTRFKQKVKWVPQGQRGRIIVFRSDLKRSA*
Ga0126382_107697811	3300010047	Tropical Forest Soil	MKLWHVWRDRRMVMARVIEFYIPDRFKPRVKWIPREQRGRVIAFPGVIRKSA*
Ga0126373_100426832	3300010048	Tropical Forest Soil	MAQVIEFYIPTRFKQKVKWVPQGQRGRIIAFRSDFKKSA*
Ga0126373_101090032	3300010048	Tropical Forest Soil	MAQVIEFYIPMRFKQKMKWVPQQQRGKIIDFPSKLKKSA*
Ga0126373_114846061	3300010048	Tropical Forest Soil	QVIEFYIPTRFKQKVKWVPPEQRGKIIDFPSDLKKSA*
Ga0126373_130477461	3300010048	Tropical Forest Soil	MAQVIEIYIPPGFKRKMKWVPPEQRGKIIVFPSDLKKSA*
Ga0126370_100410961	3300010358	Tropical Forest Soil	MAQVIEFYIPTRFKQKVKWVPQGQRGRIIVFRSDLKRSA*
Ga0126370_102083982	3300010358	Tropical Forest Soil	VRPFRRSEDVMAQVIEFYIPTRFKQKVKWVPQRQRGRIIAFRSDFKKSA*
Ga0126370_121771681	3300010358	Tropical Forest Soil	LWNVYEMARLIEFYIPGRFQRKVKWIPPNQRGKLIEFFVKKSA*
Ga0126376_127168651	3300010359	Tropical Forest Soil	MAQVIEFYIPARFKQKVKWVPPERRGKIIDFPSDLKKSA*
Ga0126372_101160792	3300010360	Tropical Forest Soil	MAQVIEFYIPARFKQNVKWVPPEQRGKIIDFPSDLKKSA*
Ga0126372_110327791	3300010360	Tropical Forest Soil	MAQVIEFYIPARFQRRVKWVPPAQRGKILQFPGELKKS
Ga0126379_1000048921	3300010366	Tropical Forest Soil	MAQVIEFYIPTRFKQKVKWVPQRQRGRIIAFRSDFKKSA*
Ga0126379_107912682	3300010366	Tropical Forest Soil	MAQVIEFYIPERFKKRVKWVPAENRGKVLSFPIDIKKTA*
Ga0105239_103413572	3300010375	Corn Rhizosphere	CLMAQVIEFYIPSRFKAKVKWIPLEQRGKVIAFPIDFKKSA*
Ga0126381_1001530032	3300010376	Tropical Forest Soil	MAHVIEFYIPARFKLKVKWVPREQRGKIIAFRSDLKKSA*
Ga0126381_1007709922	3300010376	Tropical Forest Soil	IEFYIPMRFNQKMKWVPQQQRGKIIDFPSKLKKSA*
Ga0134121_130531392	3300010401	Terrestrial Soil	MAQVIEFYIPARFKPKVKWIPPEQRGKILTFPVDLKKSA*
Ga0126354_10421281	3300010857	Boreal Forest Soil	KPGAVMMEEVRWTAVDRRMVMAQVIEFYIPARFKPKVKWVPLEQRGKILLFPTDLKKSA*
Ga0137391_102238221	3300011270	Vadose Zone Soil	MVMAQVIELYIPARFKPKVKWVPVEQRGKIIAFPTDLKKSA*
Ga0137391_102858763	3300011270	Vadose Zone Soil	AQVIEFYIPVSFKPKVKWVPQEERGKVIAFPPELKKSA*
Ga0137391_105186082	3300011270	Vadose Zone Soil	MAQVIEFYTPPRFKPKVKWIPPEQRGKILAFPTELKKSA*
Ga0137391_109094301	3300011270	Vadose Zone Soil	MMKEAKRAAVDRRMVMAQVIEFYIPSRFKRKVKWVPMEQRGKIIAFPTDLKKSA*
Ga0137388_106388192	3300012189	Vadose Zone Soil	RTAVDRRMVMAQVIEFYIPARLKPKVKWVPVEQRGKIIAFPTDLKKSA*
Ga0137388_108159263	3300012189	Vadose Zone Soil	MAHIIEFYIPARFKTKPKGATQEQRGKVIAFPSDRKKS
Ga0137388_112645351	3300012189	Vadose Zone Soil	MAQVIEFYIRARFKQKVKWIPPEQRGKIISFPADLKKSA*
Ga0137363_103960182	3300012202	Vadose Zone Soil	MVMAQVIEFYIPARFKQKVKWIPPEQRGKIIEFPADLKKSA*
Ga0137376_115111782	3300012208	Vadose Zone Soil	VKRVGVLLFSDRRVEMAQVIEFYIPARFHKKVKWIPPEQRGKVIDFPAEIRKSA*
Ga0137379_104797432	3300012209	Vadose Zone Soil	MAMAQVIEFYIPSRFKPKVKWIPSDRRGRVIAFPAAIKKSA*
Ga0137379_106783242	3300012209	Vadose Zone Soil	MARVIEFYVPAGFQRKSKWISPDERGKILEFPLAVKRTA*
Ga0137390_100729881	3300012363	Vadose Zone Soil	MAQVIGFYIPTRFKPKVQWIPPEQRGKILAFPTELKKSA*
Ga0137397_101969161	3300012685	Vadose Zone Soil	MMKEAKRAAVDRRMVMAQVIEFYIAARFKPKVKWVPVEQRGKIIAFPTDLKKSA*
Ga0137413_104959432	3300012924	Vadose Zone Soil	MAQVIEFYIPASYRPKVKWIPPERRGKVIEFRADLKKSA*
Ga0137407_100009746	3300012930	Vadose Zone Soil	MDRRLIMAQVIEFYIPTRFKQKVKWVPMEQRGKILSFPVDFKKSA*
Ga0137407_105633662	3300012930	Vadose Zone Soil	MAQVIEFYIPKRFKPKVKWIPPEQRGKILVFPTDLKKSA*
Ga0164299_101685732	3300012958	Soil	MAQVIEFYIPAGFRAKVKWIPPEQRGKILAFPVDLKKSA*
Ga0164309_108336842	3300012984	Soil	MAQVIEFYIPSRFKPKVKWVPVEQRGKILLFSTDLKKSA*
Ga0157378_102141643	3300013297	Miscanthus Rhizosphere	AQVIEFYIPARFKPKVKWIPPEQRGKILTFPVDLKKSA*
Ga0157376_113081391	3300014969	Miscanthus Rhizosphere	QVIEFYIPSRFKPKVKWIPLEQRGKIIAFPIDFKKSA*
Ga0167637_10143202	3300015087	Glacier Forefield Soil	MVMAQVIEYYIPTRFKPKVKWVPAEQRGKIIVFPADLKKSA*
Ga0163161_115610052	3300017792	Switchgrass Rhizosphere	MAQVIEFYIPSRFKAKEKWIPLEQRGKIIAFPIDFKKSA
Ga0187776_110435402	3300017966	Tropical Peatland	MVMAQAIEFYISARFKPKVKWVPEEMRGKILVFPADLKKSA
Ga0187823_100103413	3300017993	Freshwater Sediment	MAQVIEFYIPTRFKQKVKWIPPEQRGKVIAFPTDLKKSA
Ga0066662_100548073	3300018468	Grasslands Soil	MAYVIEFYIPARFSTKPKGVTQEKRGKVIAFPSDRKKSA
Ga0066669_102374572	3300018482	Grasslands Soil	MAQVIEFYIPASFKRKVKWIPAEQRGKIIFFPSDLKKSA
Ga0193729_12262982	3300019887	Soil	MVMAQVIEFYIPARFKQKVKWIPPEQRGKIIEFPTDLKKSA
Ga0193751_10300603	3300019888	Soil	MAQVIEFYTPGSFKPKAKWVPQEQRGRVIAFPSELKKSA
Ga0193751_10334183	3300019888	Soil	MAHIEFYIPARFKTKPKGVTQEQRGKVIAFPSDRKKSA
Ga0179592_103900601	3300020199	Vadose Zone Soil	MAQVIEFYIPASYRPKVKWIPPERRGKVIEFRADLKKSA
Ga0210407_100713402	3300020579	Soil	MAQVIEFYIPARFKQKVKWIPPEQRGKIIAFPTDLKKSA
Ga0210401_101232632	3300020583	Soil	MAQVIEFYIAVDRRMVMAQVIEFYIPARFKQKVKWIPPEQRGKIIAFPTDLKKSA
Ga0210382_105459812	3300021080	Groundwater Sediment	VDRRLDMAQVIEFYVPTRFKPKVKWIPPEQRGKILVFPTDLKKSA
Ga0210405_101292473	3300021171	Soil	MDRRMVMAQVIEFYIPARFKQKVKWIPPEQRGKIIAFPTDLKKSA
Ga0193719_100124533	3300021344	Soil	MAPVIEFYIPASFKPKVKWIPAEQRGKILAFPTDLKKSA
Ga0210393_111150722	3300021401	Soil	MVMAQVIEFYIPARFKQKVKWIPPEQRGKIIAFPTDLKKSA
Ga0210386_114756741	3300021406	Soil	CNEEDRRGFMAQVIEFYIPTRFTATVRWVPEKERGKVLTFPTDLEKSA
Ga0210383_111150091	3300021407	Soil	VILQEEGWAAMDRRMVMAQVIEFYIPARFKQKVKWIPPEQRGKIIAFPTDLKKSA
Ga0210394_108482581	3300021420	Soil	MAQVIEFYIPARFKQKVKWIPPEQRGKIIAFPTDLK
Ga0210384_107860752	3300021432	Soil	MAQVIEFYIPARFKPKVKWVPVEQRGKILEFPADMKKSA
Ga0210402_112336822	3300021478	Soil	MAQVIEFYIPSRYKQKVKWVPPELRGKIIAFPADLKKSA
Ga0126371_100234406	3300021560	Tropical Forest Soil	MAQVIEFYIPTRFKQKVRWVPQRQRGRIIAFRSDFKKSA
Ga0126371_132756331	3300021560	Tropical Forest Soil	NMAQVIEFYIPARFQRRVKWVPPAQRGKILQFPGELKKSA
Ga0179589_104389811	3300024288	Vadose Zone Soil	MAEVIEFYIPTRFKPKVKWIPPELRGKVIEFPTELKKSA
Ga0208848_10429812	3300025509	Arctic Peat Soil	MAQVIEYYIPTRFKPKVKWVPAEQRGKIIVFPTDLKKSA
Ga0207710_100573992	3300025900	Switchgrass Rhizosphere	MAQVIEFYIPARFKPKVKWVPLEQRGKILLFSTDLKKSA
Ga0207699_103981852	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MVMAEVIEFYIPARFKQKVRWIPPEQRGKVIAFPTELKKSA
Ga0207684_1000377216	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MAQVIEFYIPASFKSKVKWIPPEQRGKVITFPTDLKKSA
Ga0207693_106177862	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MMEEVRWTAVDRRMVMAQVIEFYIPARFKPKVKWIPVEQRGRIIAFPADLKKSA
Ga0207663_105053102	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	VDRRRVMAQVIEFYIPARFKPRMKWIPPEQRGKIITFPTDLKKSA
Ga0207687_104344302	3300025927	Miscanthus Rhizosphere	MAQVIEFYIPSRFKAKVKWIPLEQRGKVIAFPIDFKKSA
Ga0207712_121314991	3300025961	Switchgrass Rhizosphere	MAQVIEFYIPTRFKPKVKWVPPEQRGKILAFPTDLK
Ga0209863_100553711	3300026281	Prmafrost Soil	MAQVIEYYIPTRFKPKAKWVPAEQRGKIIVFPTDLKKSA
Ga0209240_10558692	3300026304	Grasslands Soil	MARVIEFYIPARFKPKAKREIQEQRGKVIAFPSDLKKPA
Ga0209153_10050011	3300026312	Soil	MAQVIEFYIPTRFQRRMKWVPPTQRGKILQFPGELKKSA
Ga0257170_10288091	3300026351	Soil	MVMAQVIEFYIPARFKPKVKWIPLEQRGKILWFPADLKKSA
Ga0257168_10005864	3300026514	Soil	VAHVIEFYIPARFKTKPKGVTQEQRGKVIAFPSDRKKSA
Ga0209648_100191476	3300026551	Grasslands Soil	VAHVIEFYIPARFKTKPKGMTQEQRGKVIAFPSDRKKSA
Ga0209217_10469272	3300027651	Forest Soil	MAQVIEFYIPSRFKPKVKWVPVEQRGKILVFPAELKKSA
Ga0209217_11803631	3300027651	Forest Soil	MAQVIEFYIPERFKVKVKWIPAEQRGKIITFPTDLKKSA
Ga0209736_11557141	3300027660	Forest Soil	MVMAQVIEFYIPTRFKPKVKWVPVAQRGKIIVFPTDLKKSA
Ga0209328_101009511	3300027727	Forest Soil	MAQVIEFYIPTRFKPKVKWVPVAQRGKIIAFPTDLKKSA
Ga0209180_100602821	3300027846	Vadose Zone Soil	MAQVIEFYIPARFKPKVKWIPLEQRGKILWFPADLKKSA
Ga0209465_105899211	3300027874	Tropical Forest Soil	VWRDRRMVMARVIEFYIPDRFKPRVKWIPREQRGRVIAFPGVIRKSA
Ga0209275_104637831	3300027884	Soil	MAPVIEFYIPARFKPKVKWVPQEQPEKVIAFPSDLKKSA
Ga0209380_100096682	3300027889	Soil	MAPVIEFYIPARFKPKVKWVPQEQREQVIAFPSDLKKSA
Ga0209068_1000008314	3300027894	Watersheds	MAQVIEFYIPARFKSKVKWIPLEQRGKILSFPADLKKSA
Ga0209068_100155781	3300027894	Watersheds	MAQVIEFYIPATFKQKVKWIPPEQRGKIISFPADLKKSA
Ga0209068_103720951	3300027894	Watersheds	MMKEAKRAAVDRRMVMAQVIEFYIPSRFKPKIKWVSMEQRGKIIAFPTDLKKSA
Ga0209583_107829501	3300027910	Watersheds	VMAQVIEFYIPARFKSKVKWIPLEQRGKILSFPADLKKSA
Ga0209526_102153313	3300028047	Forest Soil	MARVIEFYIPARFKVNVKWIPPEQRGKIITFPTDLKKSA
Ga0209526_103572311	3300028047	Forest Soil	MAQVIEFYIPTRFKPKVKWVPVAQRGKIIVFPTDLKKSA
Ga0222749_100391431	3300029636	Soil	AVILQEEGWAAMDRRMVMAQVIEFYIPARFKQKVKWIPPEQRGKIIAFPTDLKKSA
Ga0073994_100513692	3300030991	Soil	MAQVIEFYIHARFKPRVKWVPQEQRGKVVEFPSELKQSA
Ga0170824_1258745871	3300031231	Forest Soil	MAQVIEFYIPSRFKSKAKWIPAELRGKVLTFPANLKKP
Ga0170818_1017065522	3300031474	Forest Soil	MAQVIEFYIPSRFKSKVKWIPAELRGKVLTFPANLKK
Ga0310686_1088135432	3300031708	Soil	MAPVIEFYIPARFKPKVKWMPQEQCEQVIASPSDLKKSA
Ga0307469_100155876	3300031720	Hardwood Forest Soil	DRRLVMAQVIEFYIPTRFKPKVRWIPAEQRGKLLAFPTDLKKSA
Ga0307469_114153011	3300031720	Hardwood Forest Soil	MAQVIEFYIPVRFKPKVKWVPVEQRGKILAFPTDLKKSA
Ga0307477_100214656	3300031753	Hardwood Forest Soil	MAQVIEIYIPARFKTKPKGVSREQRGKVIAFPSDRKKSA
Ga0307477_102086722	3300031753	Hardwood Forest Soil	MAQVIEFYIPTRFKQKVKWVPQEQRGKIVALPSDLKK
Ga0307475_103463902	3300031754	Hardwood Forest Soil	MAEVIEFYIPARFKPKVKWIPLEQRGKVLSFPTDLKKSA
Ga0307475_104897782	3300031754	Hardwood Forest Soil	MAQVIEFYIPTRFKQKVKWVPQEQRGKIVALPSDLKKSA
Ga0318546_109355501	3300031771	Soil	MAYVIEFYVPARFKPKAKCAPEQRGKLIAFPSDAKKRFRSFLASV
Ga0307471_1012140482	3300032180	Hardwood Forest Soil	MAQVIEFYIPTRFKPKVKWTPPEQRGKVLAFPADLKKSA
Ga0307472_1009318602	3300032205	Hardwood Forest Soil	MAQVIEFYIPARFKPKVKWVPVEQRGKILEFPAAMKKSA
Ga0307472_1022361871	3300032205	Hardwood Forest Soil	MDRRMDGSEDDMAQVIEYYIPARFKPKVKWVPVEQRGKILEFPADLKKSA
Ga0335085_1000064235	3300032770	Soil	MAQVIEFYIPTRFKPKVKWVPAEQRGKILVFPTDLKKSA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F036407

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences