Metagenome / Metatranscriptome Family F036632

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F036632
Family Type	Metagenome / Metatranscriptome
Number of Sequences	169
Average Sequence Length	68 residues
Representative Sequence	DAALLIERGGAVALSADGRHPLHSQWLVWHHDPAARSKAGAAGKRLVREGRGAAERTTALVKKLVAG
Number of Associated Samples	126
Number of Associated Scaffolds	169

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.78 %
% of genes near scaffold ends (potentially truncated)	97.63 %
% of genes from short scaffolds (< 2000 bps)	86.98 %
Associated GOLD sequencing projects	115
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.51

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (97.041 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (30.178 % of family members)
Environment Ontology (ENVO)	Unclassified (50.888 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.030 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 51.58% β-sheet: 0.00% Coil/Unstructured: 48.42%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.51
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.51
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 169 Family Scaffolds
PF13517	FG-GAP_3	15.38
PF04413	Glycos_transf_N	1.78
PF12771	SusD-like_2	1.18
PF00231	ATP-synt	0.59
PF13505	OMP_b-brl	0.59
PF00006	ATP-synt_ab	0.59
PF05635	23S_rRNA_IVP	0.59
PF07715	Plug	0.59
PF02823	ATP-synt_DE_N	0.59
PF01026	TatD_DNase	0.59
PF01839	FG-GAP	0.59

COG ID	Name	Functional Category	% Frequency in 169 Family Scaffolds
COG1519	3-deoxy-D-manno-octulosonic-acid transferase	Cell wall/membrane/envelope biogenesis [M]	1.78
COG0224	FoF1-type ATP synthase, gamma subunit	Energy production and conversion [C]	0.59
COG0355	FoF1-type ATP synthase, epsilon subunit	Energy production and conversion [C]	0.59

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.04 %
Unclassified	root	N/A	2.96 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.04 %
Unclassified	root	N/A	2.96 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.04 %
Unclassified	root	N/A	2.96 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	43.79 %
Unclassified	root	N/A	2.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.59 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	43.79 %
Unclassified	root	N/A	2.96 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.59 %

Name	Rank	Taxonomy	Distribution
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	23.67 %
Unclassified	root	N/A	2.96 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	2.37 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.59 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	23.67 %
Unclassified	root	N/A	2.96 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	2.37 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.59 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	23.67 %
Unclassified	root	N/A	2.96 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	2.37 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.59 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	23.67 %
Unclassified	root	N/A	2.96 %
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	1.78 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.59 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	23.67 %
Unclassified	root	N/A	2.96 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1.78 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.59 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002912\|JGI25386J43895_10028662	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1639	Open in IMG/M
3300005166\|Ga0066674_10205785	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	936	Open in IMG/M
3300005172\|Ga0066683_10207188	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1211	Open in IMG/M
3300005172\|Ga0066683_10297204	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1003	Open in IMG/M
3300005174\|Ga0066680_10811402	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300005179\|Ga0066684_10070582	All Organisms → cellular organisms → Bacteria	2065	Open in IMG/M
3300005179\|Ga0066684_10152127	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1468	Open in IMG/M
3300005180\|Ga0066685_10083016	All Organisms → cellular organisms → Bacteria	2117	Open in IMG/M
3300005180\|Ga0066685_10822123	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300005181\|Ga0066678_10647894	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300005445\|Ga0070708_100310503	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1485	Open in IMG/M
3300005446\|Ga0066686_10002545	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	7988	Open in IMG/M
3300005447\|Ga0066689_10528978	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	745	Open in IMG/M
3300005447\|Ga0066689_11000863	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	514	Open in IMG/M
3300005471\|Ga0070698_101642591	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300005536\|Ga0070697_101105472	All Organisms → cellular organisms → Bacteria	705	Open in IMG/M
3300005552\|Ga0066701_10734234	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300005552\|Ga0066701_10917940	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300005554\|Ga0066661_10487333	All Organisms → cellular organisms → Bacteria	747	Open in IMG/M
3300005555\|Ga0066692_10114083	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1620	Open in IMG/M
3300005559\|Ga0066700_10418262	All Organisms → cellular organisms → Bacteria	944	Open in IMG/M
3300005561\|Ga0066699_10397137	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	986	Open in IMG/M
3300005569\|Ga0066705_10804334	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300005576\|Ga0066708_10918038	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300006031\|Ga0066651_10471009	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	666	Open in IMG/M
3300006034\|Ga0066656_10679726	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300006034\|Ga0066656_10907067	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300006791\|Ga0066653_10715633	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300006796\|Ga0066665_10366884	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1179	Open in IMG/M
3300006796\|Ga0066665_11680745	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300006797\|Ga0066659_10901673	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	738	Open in IMG/M
3300006797\|Ga0066659_10981442	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300006800\|Ga0066660_10374131	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1166	Open in IMG/M
3300006806\|Ga0079220_11647460	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	558	Open in IMG/M
3300006854\|Ga0075425_100154317	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2632	Open in IMG/M
3300006871\|Ga0075434_100189398	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2077	Open in IMG/M
3300006904\|Ga0075424_100148855	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	2480	Open in IMG/M
3300006914\|Ga0075436_101194268	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	574	Open in IMG/M
3300007076\|Ga0075435_100533614	All Organisms → cellular organisms → Bacteria	1015	Open in IMG/M
3300007255\|Ga0099791_10283047	All Organisms → cellular organisms → Bacteria	789	Open in IMG/M
3300007255\|Ga0099791_10487135	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300007255\|Ga0099791_10491794	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300007255\|Ga0099791_10549815	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	562	Open in IMG/M
3300009012\|Ga0066710_100949613	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1325	Open in IMG/M
3300009012\|Ga0066710_103613541	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300009012\|Ga0066710_103668650	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300009089\|Ga0099828_11068725	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
3300009090\|Ga0099827_10176193	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1765	Open in IMG/M
3300009094\|Ga0111539_11843510	All Organisms → cellular organisms → Bacteria	701	Open in IMG/M
3300009137\|Ga0066709_101727287	All Organisms → cellular organisms → Bacteria	885	Open in IMG/M
3300009137\|Ga0066709_103262030	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300009137\|Ga0066709_103471996	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300009137\|Ga0066709_104281720	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300009803\|Ga0105065_1027518	All Organisms → cellular organisms → Bacteria	710	Open in IMG/M
3300010301\|Ga0134070_10037044	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1626	Open in IMG/M
3300010301\|Ga0134070_10076637	Not Available	1147	Open in IMG/M
3300010303\|Ga0134082_10094803	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1177	Open in IMG/M
3300010320\|Ga0134109_10174878	All Organisms → cellular organisms → Bacteria	783	Open in IMG/M
3300010325\|Ga0134064_10125711	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	866	Open in IMG/M
3300010325\|Ga0134064_10398934	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	549	Open in IMG/M
3300010326\|Ga0134065_10319752	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	600	Open in IMG/M
3300010333\|Ga0134080_10150168	All Organisms → cellular organisms → Bacteria	987	Open in IMG/M
3300010333\|Ga0134080_10408499	All Organisms → cellular organisms → Bacteria	629	Open in IMG/M
3300010335\|Ga0134063_10313911	Not Available	756	Open in IMG/M
3300010336\|Ga0134071_10093605	Not Available	1421	Open in IMG/M
3300010336\|Ga0134071_10481873	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300010373\|Ga0134128_11378650	All Organisms → cellular organisms → Bacteria	777	Open in IMG/M
3300010399\|Ga0134127_10469601	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1262	Open in IMG/M
3300011421\|Ga0137462_1026454	All Organisms → cellular organisms → Bacteria	1167	Open in IMG/M
3300012142\|Ga0137343_1007942	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1270	Open in IMG/M
3300012163\|Ga0137355_1113225	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300012199\|Ga0137383_10027331	All Organisms → cellular organisms → Bacteria	3989	Open in IMG/M
3300012200\|Ga0137382_11025332	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	592	Open in IMG/M
3300012200\|Ga0137382_11109054	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300012202\|Ga0137363_10393149	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1154	Open in IMG/M
3300012203\|Ga0137399_10435818	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1095	Open in IMG/M
3300012204\|Ga0137374_10119743	All Organisms → cellular organisms → Bacteria	2425	Open in IMG/M
3300012205\|Ga0137362_11216470	All Organisms → cellular organisms → Bacteria	638	Open in IMG/M
3300012206\|Ga0137380_11358460	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300012206\|Ga0137380_11716351	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300012208\|Ga0137376_11242033	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300012208\|Ga0137376_11590560	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300012210\|Ga0137378_10201530	All Organisms → cellular organisms → Bacteria	1852	Open in IMG/M
3300012285\|Ga0137370_10382039	All Organisms → cellular organisms → Bacteria	851	Open in IMG/M
3300012349\|Ga0137387_11317317	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	504	Open in IMG/M
3300012353\|Ga0137367_10361892	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1032	Open in IMG/M
3300012357\|Ga0137384_10125617	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2146	Open in IMG/M
3300012359\|Ga0137385_10023228	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	5552	Open in IMG/M
3300012359\|Ga0137385_10129044	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2230	Open in IMG/M
3300012359\|Ga0137385_10350610	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1264	Open in IMG/M
3300012359\|Ga0137385_11223579	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300012359\|Ga0137385_11477595	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300012361\|Ga0137360_10071753	All Organisms → cellular organisms → Bacteria	2566	Open in IMG/M
3300012362\|Ga0137361_10777620	All Organisms → cellular organisms → Bacteria	872	Open in IMG/M
3300012362\|Ga0137361_11200252	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	681	Open in IMG/M
3300012362\|Ga0137361_11226060	All Organisms → cellular organisms → Bacteria	673	Open in IMG/M
3300012363\|Ga0137390_10209211	All Organisms → cellular organisms → Bacteria	1938	Open in IMG/M
3300012363\|Ga0137390_11029363	All Organisms → cellular organisms → Bacteria	774	Open in IMG/M
3300012393\|Ga0134052_1261430	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1209	Open in IMG/M
3300012403\|Ga0134049_1064976	All Organisms → cellular organisms → Bacteria	743	Open in IMG/M
3300012683\|Ga0137398_11116815	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	542	Open in IMG/M
3300012917\|Ga0137395_10721211	All Organisms → cellular organisms → Bacteria	721	Open in IMG/M
3300012918\|Ga0137396_10298940	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1190	Open in IMG/M
3300012922\|Ga0137394_11258195	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300012922\|Ga0137394_11473953	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300012925\|Ga0137419_11363548	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300012927\|Ga0137416_10013834	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	4949	Open in IMG/M
3300012944\|Ga0137410_10187422	All Organisms → cellular organisms → Bacteria	1595	Open in IMG/M
3300012972\|Ga0134077_10327709	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	648	Open in IMG/M
3300012972\|Ga0134077_10397828	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	595	Open in IMG/M
3300012976\|Ga0134076_10079613	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1276	Open in IMG/M
3300012976\|Ga0134076_10598613	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300014154\|Ga0134075_10016032	All Organisms → cellular organisms → Bacteria	2940	Open in IMG/M
3300014157\|Ga0134078_10323302	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300014880\|Ga0180082_1002361	All Organisms → cellular organisms → Bacteria	3669	Open in IMG/M
3300015053\|Ga0137405_1039009	All Organisms → cellular organisms → Bacteria	804	Open in IMG/M
3300015054\|Ga0137420_1014897	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1921	Open in IMG/M
3300015054\|Ga0137420_1095315	All Organisms → cellular organisms → Bacteria	707	Open in IMG/M
3300015054\|Ga0137420_1213511	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1705	Open in IMG/M
3300015245\|Ga0137409_10056646	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	3701	Open in IMG/M
3300015357\|Ga0134072_10112197	All Organisms → cellular organisms → Bacteria	853	Open in IMG/M
3300015359\|Ga0134085_10345413	All Organisms → cellular organisms → Bacteria	661	Open in IMG/M
3300017654\|Ga0134069_1377490	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300017656\|Ga0134112_10138363	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	932	Open in IMG/M
3300017659\|Ga0134083_10011417	All Organisms → cellular organisms → Bacteria	2988	Open in IMG/M
3300017659\|Ga0134083_10042307	All Organisms → cellular organisms → Bacteria	1696	Open in IMG/M
3300017659\|Ga0134083_10227371	All Organisms → cellular organisms → Bacteria	776	Open in IMG/M
3300017659\|Ga0134083_10542997	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300018031\|Ga0184634_10176126	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	968	Open in IMG/M
3300018058\|Ga0187766_11012427	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	592	Open in IMG/M
3300018433\|Ga0066667_10557346	All Organisms → cellular organisms → Bacteria	952	Open in IMG/M
3300018433\|Ga0066667_11948779	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300018482\|Ga0066669_10630359	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	942	Open in IMG/M
3300020170\|Ga0179594_10359680	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	552	Open in IMG/M
3300021081\|Ga0210379_10356590	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	643	Open in IMG/M
3300025885\|Ga0207653_10164963	All Organisms → cellular organisms → Bacteria	822	Open in IMG/M
3300025910\|Ga0207684_11312888	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	595	Open in IMG/M
3300026025\|Ga0208778_1017395	All Organisms → cellular organisms → Bacteria	696	Open in IMG/M
3300026122\|Ga0209926_1077028	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	573	Open in IMG/M
3300026277\|Ga0209350_1028118	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1692	Open in IMG/M
3300026295\|Ga0209234_1143005	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	856	Open in IMG/M
3300026295\|Ga0209234_1215356	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300026296\|Ga0209235_1198979	All Organisms → cellular organisms → Bacteria	698	Open in IMG/M
3300026297\|Ga0209237_1062693	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1792	Open in IMG/M
3300026298\|Ga0209236_1049527	All Organisms → cellular organisms → Bacteria	2105	Open in IMG/M
3300026301\|Ga0209238_1015166	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2982	Open in IMG/M
3300026308\|Ga0209265_1128504	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300026329\|Ga0209375_1033627	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2736	Open in IMG/M
3300026331\|Ga0209267_1006348	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	6892	Open in IMG/M
3300026335\|Ga0209804_1153996	All Organisms → cellular organisms → Bacteria	1023	Open in IMG/M
3300026343\|Ga0209159_1144128	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	950	Open in IMG/M
3300026523\|Ga0209808_1148406	All Organisms → cellular organisms → Bacteria	908	Open in IMG/M
3300026538\|Ga0209056_10272657	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1188	Open in IMG/M
3300026540\|Ga0209376_1285188	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	668	Open in IMG/M
3300026547\|Ga0209156_10475689	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	516	Open in IMG/M
3300026552\|Ga0209577_10311886	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1170	Open in IMG/M
3300027748\|Ga0209689_1403813	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300027765\|Ga0209073_10407897	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	558	Open in IMG/M
3300027882\|Ga0209590_10151062	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1440	Open in IMG/M
3300027882\|Ga0209590_10331571	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	979	Open in IMG/M
3300027882\|Ga0209590_10742972	Not Available	626	Open in IMG/M
3300028536\|Ga0137415_10236367	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1638	Open in IMG/M
3300028878\|Ga0307278_10115136	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1208	Open in IMG/M
3300031716\|Ga0310813_10332302	All Organisms → cellular organisms → Bacteria	1290	Open in IMG/M
3300031720\|Ga0307469_10649158	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	950	Open in IMG/M
3300031720\|Ga0307469_11044031	Not Available	765	Open in IMG/M
3300032205\|Ga0307472_100778840	All Organisms → cellular organisms → Bacteria	871	Open in IMG/M
3300033412\|Ga0310810_10239784	All Organisms → cellular organisms → Bacteria	2006	Open in IMG/M
3300033475\|Ga0310811_11495646	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.45%
Host-Associated	Host-Associated	3.55%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.90%
Aquatic	Environmental → Aquatic	3.55%
Plants	Host-Associated → Plants	3.55%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	92.90%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.55%
Sediment	Environmental → Aquatic → Sediment	2.96%
Freshwater	Environmental → Aquatic → Freshwater	0.59%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	87.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.55%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.96%
Loam	Environmental → Terrestrial → Soil → Loam	2.96%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.78%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.59%
Sand	Environmental → Terrestrial → Soil → Sand	0.59%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	50.30%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	34.32%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.55%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.96%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.78%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.78%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.18%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.59%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.59%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	30.18%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	23.67%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	16.57%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	10.65%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.55%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.96%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	2.37%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.37%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.78%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.18%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.18%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.59%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.59%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.59%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.59%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.59%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.59%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002912	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009803	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_40_50	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011421	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT769_2	Environmental	Open in IMG/M
3300012142	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT499_2	Environmental	Open in IMG/M
3300012163	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT800_2	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012393	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012403	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300014880	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT660_16_10D	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redo	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026025	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_103 (SPAdes)	Environmental	Open in IMG/M
3300026122	Soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_B_D2_MG (SPAdes)	Environmental	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026308	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)	Environmental	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25386J43895_100286621	3300002912	Grasslands Soil	RGGAVALSADGRHQLHSQWLVWHHDPGARAKAGAAGKRLVREGRGAAERTTELVKRLVEAGGS*
Ga0066674_102057853	3300005166	Soil	HMSRDATLLIERGGAVALSADGRHQLHSQWLVWHHDPGARTKAGAAGKRLVREGRGAAERTTALVKKLVG*
Ga0066683_102071883	3300005172	Soil	AVGPHWHMSRDATLLIERGGAVALSADGRHQLHSQWLVWHHDPGARAKAGEAGKRLVREGRGAAERTTALVKKLVGGG*
Ga0066683_102972043	3300005172	Soil	MSRDATLLIERGGAVALSADGRHQLHSQWLVWHHDPGARAKAGAAGKRLVREGRGAAERTTALVKKLVAR*
Ga0066680_108114022	3300005174	Soil	DATLLIERGGAVALSADGRHQLHSQWLVWHHDPGARAKAGAAGKRLVREGRGAAERTTELVKKLVGGG*
Ga0066684_100705824	3300005179	Soil	HMSRDAALLLERGGAVALASDGRHALHSQWLVWHHDPATRKKAGDAGKKLVREGRGAAERTTALVKNLVKG*
Ga0066684_101521273	3300005179	Soil	ATLLLERGGAVALASDGRHALHSQWLVWHHDPATRKKAGDAGKKLLREGRGAAERTTELVKRLVGGG*
Ga0066685_100830164	3300005180	Soil	AVALGTDGRHALHSQWLVWHHDPAARAKAGAAGKRLVREGRGAAERTTRLVQRLVKDGGG
Ga0066685_108221232	3300005180	Soil	HMSRDATLLIERGGAVALSADGRHQLHSQWLVWHHDPGARAKAGEAGKRLVREGRGAAERTTALVKKLVGGG*
Ga0066678_106478942	3300005181	Soil	AALLLERGGAVALPADGRQPLHAQWLVWYHDPAARKKAGAAGKRLAREGRGAAERTTALVKKLVGG*
Ga0070708_1003105033	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	TLLIERGGAVALSADGRHQLHSQWLVWHHDPGARAKAGAAGKRLVREGRGAAERTTALVKKLVAG*
Ga0066686_100025451	3300005446	Soil	SRDATLLLERGGAVALPGDARHPLHSQWLVWHHDPAARKSAGTAAQQMVEDGRGASERTTALVRGLVM*
Ga0066689_105289781	3300005447	Soil	SRDAQLLIEQGGAVALPADGRHPLHSQWLVWFHDPAARRKAGAVGKKLVQAGRGAADRTTALVQQLVRGAGR*
Ga0066689_110008631	3300005447	Soil	ATLLIERGGAVALSADGRHQLHSQWLVWHHDPGARAKAGEAGKRLVREGRGAAERTTALVKKLVGGG*
Ga0070698_1016425912	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MSRDAGLLVERGGAVALENDGQHPLHSQWLVWHHDPSARAKAGAAGKQLVKEGRGAAERTTALVKSLVGEVRGG*
Ga0070697_1011054722	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	HWRMSRDAGLMLDQGGAVALPAGDARHPLHSQWLVWHHDPAARKNAGTAAKQVVQAGRGASERTTALVRGLVKS*
Ga0066701_107342341	3300005552	Soil	HWQMSRDAALLLERGGAVALPAAGRQPLHAQWLVWYHDPAARKKAGEAGKRLAREGRGAAERTTALVKKLVSS*
Ga0066701_109179402	3300005552	Soil	LLIERGGAVALPADGRHPLHSQCLVWYHDPAARRTAGAAGKRLVQEGRGAAERTTALVRELVEGN*
Ga0066661_104873332	3300005554	Soil	MSRDAALLIERGGAVALPADGRHPLHSQCLVWYHDPAARRKAGAAGKRLVQEGRGAAERTTALVRELVEGG*
Ga0066692_101140831	3300005555	Soil	RGGAVALSADGRHQLHSQWLVWHHDPGARAKAGAAGKRLVREGRGAAERTTALVKKLVGGG*
Ga0066700_104182621	3300005559	Soil	RGGAVALAADGRHPLHSQWLVWYHDPAARRKAGAVGKHLVQGGRGAADRTTALVQHLVRDAGN*
Ga0066699_103971373	3300005561	Soil	GGAIALASDGRHALHSQWLVWHHDPATRKKAGDAGKKLVREGRGAAERTTALVKRLVGGG
Ga0066705_108043342	3300005569	Soil	LLERGGAIALASDGRHALHSQWLVWHHDPATRKKAGDAGKRLVREGRGAAERTTELVKNLVKG*
Ga0066708_109180381	3300005576	Soil	ERGGAVALASDGRHALHSQWLVWHHDPATRKKAGDAGKKLLREGRGAAERTTELVKRLVGGG*
Ga0066651_104710091	3300006031	Soil	LLLDQGGAVAMPPPGDARHPLHSQWLVWHHDPEARKRAGNAAKQMVADGRGASERTAALVWGLVDS*
Ga0066656_106797261	3300006034	Soil	DATLLIERGGAVALSADGRHQLHSQWLVWHHDPGARAKAGEAGKRLVREGRGAAERTTALVKKLVGGG*
Ga0066656_109070672	3300006034	Soil	RDATLLIERGGAVALSADGRHQLHSQWLVWHHDPGARAKAGAAGKRLVREGRGAAERTTALVKKLVGGG*
Ga0066653_107156331	3300006791	Soil	AALLIERGGAVALPGDGRHPLHSQCLVWHHDPAARRKAGDAGKRLVQEGRGAAERTTALVRRLVEDT*
Ga0066665_103668841	3300006796	Soil	RDATLLIERGGAVALSADGRHQLHSQWLVWHHDPGARAKAGEAGKRLVREGRGAAERTTALVKKLVGGG*
Ga0066665_116807451	3300006796	Soil	LTVGPYWTMSRDAGLLLEGGGAIALPVDGRRPLLSQWLVWHHDAAARRRAGKAARQVVQAGRGAAERTTRLVQELVAGD*
Ga0066659_109016731	3300006797	Soil	WRMSRDAALLLEHGGAVALAADGRHPLHSQWLVWHHDPAARRKAGKAAKEMVAEGRGASERTTALVRGLVTTSEAVS*
Ga0066659_109814421	3300006797	Soil	HWQMSRDAALLLERGGAVALPAAGRQPLHAQWLVWYHDPAARKKAGEAGKRLAREGRGAAERTTALVKKLIVGM*
Ga0066660_103741313	3300006800	Soil	RDAALLLEHGGAVALAGDGRHPLHAQWLVWHHDPAARRKAGKAAKAMVDEGRGASERTTALVRGLITTSSS*
Ga0079220_116474602	3300006806	Agricultural Soil	FGPHWHMSRDAGLLVERGGAVALETDGQHPLHSQWLVWHHDPSARAKAGTAGKQLVKEGRGAADRTTGLVRRLVEEGGS*
Ga0075425_1001543175	3300006854	Populus Rhizosphere	HWHMSRDATLLIERGGAVALTADGRHQLHSQWLVWHHDPGARAKAGAAGKRLVQEGRGASERTTALVKRLVEVGGGA*
Ga0075434_1001893984	3300006871	Populus Rhizosphere	AVALSADGRHQLHSQWLVWHHDPGARAKAGAAGKRLVREGRGAAERTTALVKKLVAG*
Ga0075424_1001488551	3300006904	Populus Rhizosphere	IVFGPHWRMSRDATLLLEQGGAVALPADARHPLHSQWLVWHHDPAARRSAGKAAKQVVEDGRGASERTTALVRGLVT*
Ga0075436_1011942682	3300006914	Populus Rhizosphere	LLERGAAAAMPADARHPLHSQWLVWHHDPAARRKAGTAAKEVVAEGRGASERTTALVRELVGA*
Ga0075435_1005336141	3300007076	Populus Rhizosphere	LDQGGAVALPAGDARHPLHSQWLVWHHDPAARKSAGKAAQKMVAEGRGASERTAALVWALVEA*
Ga0099791_102830473	3300007255	Vadose Zone Soil	LLIERGGAVALSADGRHQLHSQWLVWHHDPGARAKAGAAGKRLVREGRGAAERTTALVKKLVAG*
Ga0099791_104871351	3300007255	Vadose Zone Soil	LLIERGGAVALSADGRHQLHSQWLVWHHDPGARTKAGAAGKRLVREGRGAAERTTALVKKLVAG*
Ga0099791_104917942	3300007255	Vadose Zone Soil	RMSRDAALLLEKGGAVALPADARHPLHSQWLVWHHDPAARVTAGLAAKLMVAEGRGASERTTALVRGLVQS*
Ga0099791_105498152	3300007255	Vadose Zone Soil	LLEGGGAIALPVDGRRALLSQWLVWHHDGATRRRAGKAAREVVLAGRGAAERTTRLVLELVAGD*
Ga0066710_1009496131	3300009012	Grasslands Soil	WHMSRDATLLIERGGAVALSADGRHQLHSQWLVWHHDPGARAKAGEAGKRLVREGRGAAERTTALVKKLVGGG
Ga0066710_1036135412	3300009012	Grasslands Soil	HMSRDATLLIERGGAVALSADGRHQLHSQWLVWHHDPGARTKAGAAGKRLVREGRGAAERTTALVKKLVG
Ga0066710_1036686502	3300009012	Grasslands Soil	LMERGGAVALSADGRQQLHSQWLVWHHDPAARAKAGAAGKRLVREGRGAAERTTALVKKLVAG
Ga0099828_110687251	3300009089	Vadose Zone Soil	AVGPHWHMSRDATLLIERGGAVALSADGRHQLHSQWLVWHHDPGARAKAGAAGKRLVREGRGAAERTTALVKKLVAG*
Ga0099827_101761933	3300009090	Vadose Zone Soil	MSRDAGLLLERGGAIALPLDGRHPLLAQWLVWHHDAVARRRAGKAAREVVLAGRGAAERTTRLVQELVAGD*
Ga0111539_118435102	3300009094	Populus Rhizosphere	RMSRDAALLLDHGGGIALPADARHPLHSQWLVWHHDPAARRNAGSAAKKMVETGRGAAERTTALVRGLVKR*
Ga0066709_1017272871	3300009137	Grasslands Soil	WHMSRDATLLIERGGAVALSADGRHQLHSQWLVWHHDPGARAKAGEAGKRLVREGRGAAERTTALVKKLVGGG*
Ga0066709_1032620301	3300009137	Grasslands Soil	SRDATLLIERGGAVALPADGRHPLHSQWLVWYHDPTARRKAGQAGKRLVQEGRGAAERTTALVRELVEG*
Ga0066709_1034719962	3300009137	Grasslands Soil	HMSRDATLLIERGGAVALSADGRHQLHSQWLVWHHDPGARAKAGAAGKRLVREGRGAAERTTALVKKLVG*
Ga0066709_1042817202	3300009137	Grasslands Soil	GAVALPADGRHPLHSQWLVWHHDPAARRKAGEAGKRLVQEGRGAAERTTALVRRLVEG*
Ga0105065_10275181	3300009803	Groundwater Sand	LLIERGGAVALPADGRHPLHSQWLVWHHDPEARRKAGEVGRRLVREGRGAAERTTALVRGLVAG*
Ga0134070_100370444	3300010301	Grasslands Soil	GGAVALAADGRHPLHSQCLVWYHDPAARRKAGAAGKRLVQEGRGAAERTTALVRELVEG*
Ga0134070_100766372	3300010301	Grasslands Soil	GGAVALPADGRQPLHAQWLVWHHDDGARGKAGKAGKKMVLAGRGAAERTTALVLELVPG*
Ga0134082_100948032	3300010303	Grasslands Soil	RDAALLIERGGAVALPADGRHPLHSQWLVWHHDPAARRIAGAAGKRLVQEGRGAAERTTALVRKLVTG*
Ga0134109_101748782	3300010320	Grasslands Soil	FGPHWRMSRDAALLLDQGGAVALPSDGRHPLHSQWLVWHHDPAARHKAGTAALEMIEAGRGASERTTALVRGLVEG*
Ga0134064_101257113	3300010325	Grasslands Soil	LVARGAAVALPADGRHPLHSQWLVWHHDPATRRKAGAAGRRVVTEGRGAAERTSALVEQLLTANRPA*
Ga0134064_103989342	3300010325	Grasslands Soil	FGPHWRMSRDATLLLEQGGAVALPADARHPLHSQWLVWHHDPAARRSAGKAAKTMVEEGRGASERTTALVRGLVS*
Ga0134065_103197521	3300010326	Grasslands Soil	QMSRDAGLLLERSGAVALPGDARHPLHSQWLVWHHDAEARRKAGAAAKAVVAEGRGASERTTALVRELVVKR*
Ga0134080_101501682	3300010333	Grasslands Soil	LLLEQGGAVALPGDARHPLHSQWLVWHHDPAARRNAGNAAKQVVADGRGASERTTALVRGLVRS*
Ga0134080_104084991	3300010333	Grasslands Soil	MSRDATLLIERGGAVALSADGRHQLHSQWLVWHHDPGARAKAGEAGKRLVREGRGAAERTTALVKKLVGGG*
Ga0134063_103139112	3300010335	Grasslands Soil	RGGAVALPADGRQPLHAQWLVWHHDDGARGKAGKAGKKMVLAGRGAAERTTALVLELVAG
Ga0134071_100936051	3300010336	Grasslands Soil	AVALPADGRQPLHAQWLVWHHDDGARGKAGKAGKKMVLAGRGAAERTTALVLELVPG*
Ga0134071_104818731	3300010336	Grasslands Soil	HWRMSRDATLLLEQGGAVALPADARHPLHSQWLPRHHAPAARKSAGKAAKTMVEDGRGASERTTALVRGLVER*
Ga0134128_113786501	3300010373	Terrestrial Soil	PHWRMSRDAALLLDHGGGVALPADARHPLHSQWLVWHHDPGARRNAGSAAKKMVEAGRGAAERTTALVRGLVKR*
Ga0134127_104696011	3300010399	Terrestrial Soil	LLLECGAAVALPGDARHPLHSQWLVWHHDAAARRKAGAAAKAVVAEGRGASERTTALVRELVQH*
Ga0137462_10264541	3300011421	Soil	GGAVALPADGRQPLHSQSLVWFHDPAARRKAGAVGQQVVREGRGAAERTTALVLVLVRDVARS*
Ga0137343_10079422	3300012142	Soil	MSRDAHLLIERGGAVALPADGRQPLHSQSLVWFHDPAARRKAGAVGQQVVREGRGAAERTTALVLALVRDAARS*
Ga0137355_11132251	3300012163	Soil	QPLHSQSLVWFHDPAALRKAGAVGQQVVREGRGAAERTTALVLALVRDAARS*
Ga0137383_100273317	3300012199	Vadose Zone Soil	LIAGEGAVALPADGRQALHSQWLVWFHDPAARRKAGAVGRQMVQAGRGAAERTTALVERLVRDAGR*
Ga0137382_110253322	3300012200	Vadose Zone Soil	RMSRDAGLLLDKGGAVALPSDARHPLHSQWLVWHHDPATRRKAGDAGRGVVNEGRGAAERTSALVERLLVGAGT*
Ga0137382_111090541	3300012200	Vadose Zone Soil	ERGGAVALPADGRHPLHSQCLVWYHDPAARRKAGAAGKRLVQEGRGAAERTTALVRELVEG*
Ga0137363_103931491	3300012202	Vadose Zone Soil	LLIERGGAVALSADGRHQLHSQWLVWHHDPGARTKAGAAGKRLVREGRGAAERTTALVKKLVGGG*
Ga0137399_104358183	3300012203	Vadose Zone Soil	DATLLIERGGAVALSADGRHQLHSQWLVWHHDPAARTKAGAAGKRLVREGRGAAERTTALVKKLVAG*
Ga0137374_101197431	3300012204	Vadose Zone Soil	DAALLLEQGGAVALPPPGAARHPPHSQWLVWHHDPAARKSAGKAAKKTVDDGRGAAERTAALVWGLVES*
Ga0137362_112164701	3300012205	Vadose Zone Soil	ERGGAIAVAADGRQPLHAQWLVWFHDPVVRRKAGAVGRQMVREGRGAAERTTALVLQLVRDAGRS*
Ga0137380_113584602	3300012206	Vadose Zone Soil	DATLLIERGGAVALSADGRHQLHSQWLVWHHDPGARAKAGAAGKRLVREGRGAAERTTALVKRLVEVDGS*
Ga0137380_117163512	3300012206	Vadose Zone Soil	GAVALSADGRHQLHSQWLVWHHDPGARAKAGEAGKRLVREGRGAAERTTALVKKLVGGG*
Ga0137376_112420331	3300012208	Vadose Zone Soil	ATLLIERGGAVALSADGRQQLHSQWLVWHHDPGARTKAGSAGKNLVREGRGAAERTTALVKKLVGGG*
Ga0137376_115905602	3300012208	Vadose Zone Soil	HMSRDATLLIERGGAVALSADGRHQLHSQWLVWHHDPGARTKAGAAGKRLVREGRGAAERTTALVKKLVGGG*
Ga0137378_102015304	3300012210	Vadose Zone Soil	RGGAVALPAAGRQPLHAQWLVWYHDPAARKKAGEAGKRLAREGRGAAERTTALVKKLIVDM*
Ga0137370_103820393	3300012285	Vadose Zone Soil	VALSADGRHQLHSQWLVWHHDPGARAKAGAAGKRLVREGRGAAERTTALVKKLVGGG*
Ga0137387_113173172	3300012349	Vadose Zone Soil	RDAGLLLERGAAVALPSDARHPLHSQWLVWHHDAAARRKAGAAAKEVVAEGRGASERTTALVRDLVVAP*
Ga0137367_103618923	3300012353	Vadose Zone Soil	SRDAALLIERGGAVALPADGRHPLHSQWLVWHHDPAARARAGGAGKQLVHEGRGAADRTTALVKRLVAG*
Ga0137384_101256172	3300012357	Vadose Zone Soil	MSRDAALLIEQGGLVALAADGRHPLHSQWLVWFHDPAARRKAGAVGKTMVQAGRGAAERTTALVQRLVRGR*
Ga0137385_100232288	3300012359	Vadose Zone Soil	AALLIERGGAVALPADGRQPLHAQWLVWHHDDEARGKAGKAGKKMVLAGRGAAERTTALVLELVAG*
Ga0137385_101290441	3300012359	Vadose Zone Soil	DAALLIERGGAVALPADGRHPLHSQWLVWHHDPAARRKAGAAGKRLVQEGRGAAERTTALVRKLVTG*
Ga0137385_103506103	3300012359	Vadose Zone Soil	LLLERGGAIALASDGRHALHSQWLVWHHDPATRKKAGDAGKKLVREGRGAAERTTELVKKLVGGG*
Ga0137385_112235792	3300012359	Vadose Zone Soil	GAVALPADGRQALHSQWLIWFHDPAARRKAGAVGRQMVQAGRGAAERTTALVERLVRDAGR*
Ga0137385_114775952	3300012359	Vadose Zone Soil	ERGGAVALSADGRHQLHSQWLVWHHDPGARAKAGEAGKRLVREGRGAAERTTALVKKLVGGG*
Ga0137360_100717531	3300012361	Vadose Zone Soil	DQGGAVALPPPGDARHPLHSQWLVWHHDPAARRNTGKAAKQMVADGRGAAERTAALVWGLVES*
Ga0137361_107776201	3300012362	Vadose Zone Soil	LLLDQGGAVALPADARHPLHSQWLVWHHDPAVRKSAGRAAKQMVADGRGAAERTAALVWGLVES*
Ga0137361_112002521	3300012362	Vadose Zone Soil	LEQGGAVALPPPGDARHPLHSQWLVWHHDPAARKSAGQAAKQMVEDGRGASERTTALVRGLVT*
Ga0137361_112260601	3300012362	Vadose Zone Soil	QGGAVALPADARHPLHSQWLVWHHDPAARKSAGKDAKRMVAEGRGAAERTAALVWGLVDS
Ga0137390_102092112	3300012363	Vadose Zone Soil	DAALLLDEGGAVALPADARHPLHSQWLVWHHDPAARKSAGKAAKKMVADGRGAAERTAALVWGLVES*
Ga0137390_110293632	3300012363	Vadose Zone Soil	IERGGAVALSADGRHQLHSQWLVWHHDPGARTKAGAAGKRLVREGRGAAERTTALVKKLVAG*
Ga0134052_12614301	3300012393	Grasslands Soil	VFGPHWRMSRDATLLLERGGAVALPGDARHPLHSQWLVWHHDPGARAKAGAAGKRLVREGRGAAERTTALVKKLVGGG*
Ga0134049_10649762	3300012403	Grasslands Soil	LIERGGAVALSADGRHQLHSQWLVWHHDPGARAKAGAAGKRLVREGRGAAERTTALVKKLVGGG*
Ga0137398_111168152	3300012683	Vadose Zone Soil	FGPHWRMSRDAALLLDQGGAVAMPPPGDARHPLHSQWLVWHHDPEARKRAGKAAKQVVADGRGASERTAALVWGLVEG*
Ga0137395_107212111	3300012917	Vadose Zone Soil	HWRMSRDAALLLDQGGAVALPPHGDARHPLHSQWLVWHHDPAARKSAGKAAKQMVAEGRGAAERTAALVWGLVES*
Ga0137396_102989404	3300012918	Vadose Zone Soil	MSRDAALLLEQGGGVALPGDARHPLHSQWLVWHHDPAARRKAGKAAKQVVADGRGASERTTALVQGLVLTPDAAS*
Ga0137394_112581952	3300012922	Vadose Zone Soil	WHMSRDATLLIERGGAVALSADGRHQLHSQWLVWHHDPGARTKAGAAGKRLVREGRGAAERTTALVKKLVGGG*
Ga0137394_114739531	3300012922	Vadose Zone Soil	IERGGAVALSADGRHQLHSQWLVWHHDPGARAKAGTAGKRLVREGRGAAERTTALVKKLVAG*
Ga0137419_113635481	3300012925	Vadose Zone Soil	AGLLLERGAAVALPADARHPLHSQWLVWHHDAAARRKAGNAAKHVVAEGRGASERTTALVQELVVPS*
Ga0137416_100138341	3300012927	Vadose Zone Soil	AVALPGDARHPLHSQWLVWHHDPAARRKAGKAAKQVVADGRGASERTTALVQGLVLTPDAAS*
Ga0137410_101874222	3300012944	Vadose Zone Soil	RDAALLLDQGGAVALPADARHPLHSQWLVWHHDPAARKSAGKAAKRVVAEGRGAAERTAALVWGLVDS*
Ga0134077_103277092	3300012972	Grasslands Soil	WRMSRDAALLLEKGGGVALPADARHPLHSQWLVWHHDPAARVTAGLAAKLMVAEGRGASERTTALVRGLVES*
Ga0134077_103978281	3300012972	Grasslands Soil	WDNSRDAGLLVARGGAVALPADGRHPLHSQWLVWHHDPATRRKAGDAGRGVVNEGRGAAERTSALVERLLTESRPA*
Ga0134076_100796131	3300012976	Grasslands Soil	HWHMSRDAAMLIERGGGVALPADGRHPLHSQWLVWHHDPDARRKAGEVGKRLVRQGRGASERTTELVRKLVEVGG*
Ga0134076_105986131	3300012976	Grasslands Soil	RDAALLLDQGGAVALPADGRHPLHSQWLVWHHDPAARHKAGTAALEMIEAGRGASERTTALVRGLVER*
Ga0134075_100160321	3300014154	Grasslands Soil	AVALPAAGRQPLHAQWLVWYHDPAARKKAGEAGKRLAREGRGAAERTTALVKKLIVGM*
Ga0134078_103233022	3300014157	Grasslands Soil	RDATLLLQRGGAIALASDGRHALHSQWLVWHHDPTTRKKAGDAGKKLVREGRGAAERTTALVKRLVAG*
Ga0180082_10023611	3300014880	Soil	AVARLADGRQALGSQSLVWWHEAAARRKAGAVGQQVVREGRGAAERTTALVLALVRDAARS*
Ga0137405_10390091	3300015053	Vadose Zone Soil	AATRRYWLLIERGGAVALSADGRHQLHSQWLVWHHDPGARAKAGAAGKRLVREGRGAAERTTALVKKLVAG*
Ga0137420_10148971	3300015054	Vadose Zone Soil	LIERGGAVALSADGRHQLHSQWLVWHHDPGARTKAGAAGKRLVREGRGAAERTTALVKKLVAG*
Ga0137420_10953151	3300015054	Vadose Zone Soil	RDVADRALLIERGGAVALSADGRHQLHSQWLVWHHDPGARAKAGAAGKRLVREGRGAAERTTALVKKLVAG*
Ga0137420_12135111	3300015054	Vadose Zone Soil	ERGGAVALSVDGRHQLHSQWLVWHHDPGARAKAGAAGKRLVREGRGAAERTTALVKKLVAG*
Ga0137409_100566461	3300015245	Vadose Zone Soil	ATLLIERGGAVALSADGRHQLHSQWLVWHHDPGARAKAGAAGKRLVREGRGAAERTTALVKKLVAG*
Ga0134072_101121971	3300015357	Grasslands Soil	VALSADGRHQLHSQWLVWHHDPGARTKAGAAGKRLVREGRGAAERTTELVKRLVEAGGR*
Ga0134085_103454132	3300015359	Grasslands Soil	RDAALLLDHGGAVALPPPGDARHPLHSQWLVWHHDPAARKSAGQAAKQVVAEGRGAAERTAALVWGLVES*
Ga0134069_13774901	3300017654	Grasslands Soil	ERGGAVALSADGRHQLHSQWLVWHHDPGARTKAGAAGKRLVREGRGAAERTTALVKKLVG
Ga0134112_101383631	3300017656	Grasslands Soil	RDATLLIERGGAVALSADGRHQLHSQWLVWHHDPGARAKAGAAGKRLVREGRGAAERTTALVKRLVGGG
Ga0134083_100114171	3300017659	Grasslands Soil	ERGGAVALPADGRQPLHAQWLVWHHDDGARGKAGKAGKKMVLAGRGAAERTTALVLELVP
Ga0134083_100423071	3300017659	Grasslands Soil	HEPRRHTPDQRGGAVAMPADGRHPLHSQCLVWYHDPAARRKAGQAGKRLVQEGRGAAERTTALVRELVEG
Ga0134083_102273712	3300017659	Grasslands Soil	VGPHWHMSRDATLLIERGGAVALSADGRHQLHSQWLVWHHDPGARAKAGEAGKRLVREGRGAAERTTALVKKLVGGG
Ga0134083_105429972	3300017659	Grasslands Soil	AALLLDQGGAVALPADARHPLHSQWLVWHHDPTARAKAGAAGKKLVREGRDAAERTTALVKKLVGGG
Ga0184634_101761263	3300018031	Groundwater Sediment	GLLLASGAAVALPADARHPLHSQWLVWHHDAAARRKAGNAAKQVVADGRGAAERTTALVRELVVGR
Ga0187766_110124272	3300018058	Tropical Peatland	AVALPPGGDAALLGQWLVWHHDPAVRSRAGQAARQVVEAGRGAALRTTTLVQELVVGAA
Ga0066667_105573463	3300018433	Grasslands Soil	RDATLLIERGGAVALSADGRHQLHSQWLVWHHDPGARAKAGEAGKRLVREGRGAAERTTALVKKLVGGG
Ga0066667_119487791	3300018433	Grasslands Soil	RDATLLIERGGAVALSADGRHQLHSQWLVWHHDPGARAKAGAAGKRLVREGRGAAERTTELVKKLVGGG
Ga0066669_106303593	3300018482	Grasslands Soil	WHMSRDATLLIERGGAVALSADGRHQLHSQWLVWHHDPGARTKAGAAGKRLVREGRGAAERTTALVKKLVG
Ga0179594_103596802	3300020170	Vadose Zone Soil	GAVALPADARHPLHSQWLVWHHDPAARRTAGTAAKEMVAEGRGASERTTALVQGLVTSHAASS
Ga0210379_103565902	3300021081	Groundwater Sediment	AGLLIERGGAVALPGDARHPLHSQWLVWHHDAAARRKAGAAAKEVVAEGRGASERTTALVRELVTAGR
Ga0207653_101649631	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	GAVALATDGRHALHSQWLVWHHDPATRKKAGDAGKKLVREGRGAAERTTALVKKLVSG
Ga0207684_113128881	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	TLLLEQGGAVALPADARHPLHSQWLVWHHDPAARGSAGNAAKQVVEDGRGASERTTALVRGLVT
Ga0208778_10173952	3300026025	Rice Paddy Soil	MSRDAGLLIARGGAVALAVDGRHPLHSQWLVWHHDPATRAKAGAAGKQLVRDGRGAAERTTALVKRLVGGG
Ga0209926_10770281	3300026122	Soil	LDRGGAVALPADGRHALHAQWLVWHRDAAARHKAGEAGKRLVGEGRGAAERTTMLVEQLMRDR
Ga0209350_10281184	3300026277	Grasslands Soil	DAALLIERGGAVALSADGRHPLHSQWLVWHHDPAARSKAGAAGKRLVREGRGAAERTTALVKKLVAG
Ga0209234_11430053	3300026295	Grasslands Soil	AHWRMSRDAALLLEHGGAVALAADGRHPLHSQWLVWHHDPAARRKAGKAAKAMVAEGRGASERTTALVRGLVTTS
Ga0209234_12153561	3300026295	Grasslands Soil	TLLLERGGAVALASDGRHALHSQWLVWHHDPATRKKAGDAGKKLLREGRGAAERTTALVKRLVGGG
Ga0209235_11989791	3300026296	Grasslands Soil	SRDATLLIERGGAVALSADGRHQLHSQWLVWHHDPGARAKAGAAGKRLVREGRGAAERTTELVKKLVGGG
Ga0209237_10626931	3300026297	Grasslands Soil	MSRDATLLIERGGAVALSADGRHQLHSQWLVWHHDPGARAKAGAAGKRLVREGRGAAERTTALVKKLVGGG
Ga0209236_10495272	3300026298	Grasslands Soil	SRDAALLLDQGGAVALPADARHPLHSQWLVWHHDPAARKSAGKAAKKMVADGRGAAERTAALVWGLVES
Ga0209238_10151663	3300026301	Grasslands Soil	MSRDATLLIERGGAVALSADGRQQLHSQWLVWRHDPGARTKAGSAGKNLVREGRGAAERTTALVKKLVGGG
Ga0209265_11285042	3300026308	Soil	LLLQRGGAIALASDGRHALHSQWLVWHHDPTTRKKAGDAGKKLVREGRGAAERTTALVKKLVAG
Ga0209375_10336271	3300026329	Soil	SRDATLLIERGGAVALSADGRHQLHSQWLVWHHDPGARAKAGAAGKRLVREGRGAAERTTALVKKLVGGG
Ga0209267_10063481	3300026331	Soil	LLLERGGAIALASDGRHALHSQWLVWHHDPATRKKAGDAGKRLVREGRGAAERTTELVKNLVKG
Ga0209804_11539961	3300026335	Soil	GPHWHMSRDATLLLERGGAVALASDGRHALHSQWLVWHHDPTTRKKAGDAGKKLVREGRGAAERTTALVKKLVAG
Ga0209159_11441281	3300026343	Soil	HWHMSRDATLLIERGGAVALSADGRHQLHSQWLVWHHDPGARTKAGAAGKRLVREGRGAAERTTALVKKLVG
Ga0209808_11484061	3300026523	Soil	SRDAALLLDQGGAIGVPSDGRHPLHSQWLVWHHDPTARKKAGKAAKQMVEDGRGASERTTALVRSLVQS
Ga0209056_102726573	3300026538	Soil	SRDATLLIERGGAVALSADGRHQLHSQWLVWHHDPGARAKAGEAGKRLVREGRGAAERTTALVKKLVGGG
Ga0209376_12851882	3300026540	Soil	DAALLIERGGAVALPADGRHPLHSQWLVWHHDPAARRKAGAAGKRLVQEGRGAAERTTALVRKLVTG
Ga0209156_104756891	3300026547	Soil	MSRDAALLLEKGGAVALPADARHPMHSQWLVWHHDPAARVTAGLSAKLMVAEGRGASARTIALVQGLVEA
Ga0209577_103118861	3300026552	Soil	MSRDAALLLEHGGAVALAGDGRHPLHAQWLVWHHDPAARRKAGKAAKAMVDEGRGASERTTALVRGLITTSSS
Ga0209689_14038132	3300027748	Soil	ERGGAVALSADGRHQLHSQWLVWHHDPGARAKAGAAGKRLVREGRGAAERTTELVKKLVGGG
Ga0209073_104078972	3300027765	Agricultural Soil	FGPHWHMSRDAGLLVERGGAVALETDGQHPLHSQWLVWHHDPSARAKAGTAGKQLVKEGRGAADRTTGLVRRLVEEGGS
Ga0209590_101510621	3300027882	Vadose Zone Soil	LERGGAVALPAAGRQPLHAQWLVWYHDPAARKKAGEAGKRLAREGRGAAERTTALVKKLIVGM
Ga0209590_103315711	3300027882	Vadose Zone Soil	LLIERGGAVALSADGRHQLHSQWLVWHHDPGARTKAGAAGKRLVREGRGAAERTTALVKKLVAG
Ga0209590_107429722	3300027882	Vadose Zone Soil	AALLIERGGAVALSADGRQPLHAQWLVWHHDDAARGKAGKAGKKMVLAGRGAAERTTALVLELVAG
Ga0137415_102363671	3300028536	Vadose Zone Soil	AVGPHWHMSRDATLLIERGGAVALTTDGRHQLHSQWLVWHHDPGARTKAGAAGKRLVREGRGAAERTTALVKKLVAG
Ga0307278_101151364	3300028878	Soil	LLLDQGGAVAMPPPGDARHPLHSQWLVWHHDPEARKRAGKAAKQMVADGRGASERTAALVWGLVEG
Ga0310813_103323022	3300031716	Soil	MSRDATLLLEKGGAVALPSDGRHPLHSQWLVWHHDPTARANAGKAGKQLIEEGRGASERTTALVQGLVTA
Ga0307469_106491581	3300031720	Hardwood Forest Soil	AHLLIEEGGAVALPADGQQPLQAQWLVWYHDAATRKKAGAAGKRIVRAGRGAAERTTALVELLVRTGKQ
Ga0307469_110440312	3300031720	Hardwood Forest Soil	LIERGGAVALPADGRQPLHAQWLVWHHDDGARGKAGKAGKKMVLAGRGAAERTTALVLELVAG
Ga0307472_1007788401	3300032205	Hardwood Forest Soil	VAVGPHWHMSRDATLLIERGGAVALSADGRHQLHSQWLVWHHDPGARAKAGAAGKRLVREGRGAAERTTALVKKLVAG
Ga0310810_102397841	3300033412	Soil	PTVFGPHWRMSRDATLLLEKGGAVALPSDGRHPLHSQWLVWHHDPTARANAGKAGKQLVEEGRGAADRTTALVRGLVQS
Ga0310811_114956461	3300033475	Soil	GPHWRMSRDATLLLEKGGAVALPSDGRHPLHSQWLVWHHDPTARANAGKAGKQLVEEGRGAADRTTALVRGLVQS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F036632

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences