Metagenome / Metatranscriptome Family F037136

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F037136
Family Type	Metagenome / Metatranscriptome
Number of Sequences	168
Average Sequence Length	40 residues
Representative Sequence	MIFMRVYKHWLDYDVAALAFLIVGIAAVELIAIII
Number of Associated Samples	114
Number of Associated Scaffolds	168

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	6.10 %
% of genes near scaffold ends (potentially truncated)	55.36 %
% of genes from short scaffolds (< 2000 bps)	87.50 %
Associated GOLD sequencing projects	105
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (52.381 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (28.571 % of family members)
Environment Ontology (ENVO)	Unclassified (41.071 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.976 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 52.38% β-sheet: 0.00% Coil/Unstructured: 47.62%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.46
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.46
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 168 Family Scaffolds
PF04392	ABC_sub_bind	5.36
PF03401	TctC	1.79
PF00582	Usp	1.79
PF01384	PHO4	1.19
PF07859	Abhydrolase_3	1.19
PF00872	Transposase_mut	1.19
PF00106	adh_short	0.60
PF01321	Creatinase_N	0.60
PF13432	TPR_16	0.60
PF13180	PDZ_2	0.60
PF01609	DDE_Tnp_1	0.60
PF02371	Transposase_20	0.60
PF04191	PEMT	0.60
PF04972	BON	0.60
PF08327	AHSA1	0.60
PF00589	Phage_integrase	0.60
PF00005	ABC_tran	0.60
PF00248	Aldo_ket_red	0.60
PF01202	SKI	0.60
PF14312	FG-GAP_2	0.60
PF00285	Citrate_synt	0.60
PF14534	DUF4440	0.60
PF00227	Proteasome	0.60
PF07508	Recombinase	0.60
PF01068	DNA_ligase_A_M	0.60
PF04218	CENP-B_N	0.60
PF00126	HTH_1	0.60

COG ID	Name	Functional Category	% Frequency in 168 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	5.36
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	1.79
COG0306	Phosphate/sulfate permease	Inorganic ion transport and metabolism [P]	1.19
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	1.19
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	1.19
COG0006	Xaa-Pro aminopeptidase	Amino acid transport and metabolism [E]	0.60
COG0372	Citrate synthase	Energy production and conversion [C]	0.60
COG0638	20S proteasome, alpha and beta subunits	Posttranslational modification, protein turnover, chaperones [O]	0.60
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	0.60
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.60
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.60
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.60
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.60
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.60
COG3484	Predicted proteasome-type protease	Posttranslational modification, protein turnover, chaperones [O]	0.60
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.60
COG5405	ATP-dependent protease HslVU (ClpYQ), peptidase subunit	Posttranslational modification, protein turnover, chaperones [O]	0.60
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.60
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.60
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.60

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	52.38 %
Unclassified	root	N/A	47.62 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	52.38 %
Unclassified	root	N/A	47.62 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	52.38 %
Unclassified	root	N/A	47.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.62 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	45.24 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.62 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	42.26 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.60 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.62 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	13.10 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	10.71 %
Legionellales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales	0.60 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.60 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.62 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	12.50 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.38 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	1.79 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1.19 %
Methylocystaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae	1.19 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.60 %
Pirellulales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales	0.60 %
Legionellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → Legionellaceae	0.60 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.62 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	12.50 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	1.79 %
Methylosinus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus	1.19 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.60 %
Lacipirellulaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Lacipirellulaceae	0.60 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.60 %
Sphingobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium	0.60 %
unclassified Hyphomicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae	0.60 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.60 %
Legionellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → Legionellaceae	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.62 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	12.50 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	1.79 %
Methylosinus sporium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → Methylosinus sporium	1.19 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.60 %
unclassified Sphingobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium → unclassified Sphingobium	0.60 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.60 %
Botrimarina	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Lacipirellulaceae → Botrimarina	0.60 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.60 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.60 %
Legionellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → Legionellaceae	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.62 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	12.50 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	1.79 %
Methylosinus sporium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → Methylosinus sporium	1.19 %
Botrimarina colliarenosi	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Lacipirellulaceae → Botrimarina → Botrimarina colliarenosi	0.60 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.60 %
Sphingobium sp. HDIP04	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium → unclassified Sphingobium → Sphingobium sp. HDIP04	0.60 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.60 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.60 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.60 %
Legionellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → Legionellaceae	0.60 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2070309004\|prs_FHA1B5K04XHS5H	Not Available	507	Open in IMG/M
2088090014\|GPIPI_17490720	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2543	Open in IMG/M
3300000550\|F24TB_10418679	Not Available	675	Open in IMG/M
3300000580\|AF_2010_repII_A01DRAFT_1036679	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	762	Open in IMG/M
3300000580\|AF_2010_repII_A01DRAFT_1075264	Not Available	512	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10122890	Not Available	633	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1013211	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1571	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10055646	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	876	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10122040	Not Available	544	Open in IMG/M
3300000956\|JGI10216J12902_104905471	Not Available	1089	Open in IMG/M
3300000956\|JGI10216J12902_107173486	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3154	Open in IMG/M
3300001867\|JGI12627J18819_10360809	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	588	Open in IMG/M
3300002911\|JGI25390J43892_10049313	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	996	Open in IMG/M
3300002914\|JGI25617J43924_10266695	Not Available	583	Open in IMG/M
3300004633\|Ga0066395_10370213	Not Available	800	Open in IMG/M
3300005178\|Ga0066688_10263922	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1104	Open in IMG/M
3300005187\|Ga0066675_10567117	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	852	Open in IMG/M
3300005332\|Ga0066388_101393047	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1217	Open in IMG/M
3300005332\|Ga0066388_104888557	Not Available	681	Open in IMG/M
3300005332\|Ga0066388_106103016	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	608	Open in IMG/M
3300005363\|Ga0008090_15851748	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	624	Open in IMG/M
3300005436\|Ga0070713_100655630	Not Available	1000	Open in IMG/M
3300005436\|Ga0070713_102471246	Not Available	502	Open in IMG/M
3300005467\|Ga0070706_100934094	Not Available	801	Open in IMG/M
3300005713\|Ga0066905_100813080	All Organisms → cellular organisms → Bacteria	811	Open in IMG/M
3300005713\|Ga0066905_101905445	Not Available	550	Open in IMG/M
3300005764\|Ga0066903_100637863	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1858	Open in IMG/M
3300005764\|Ga0066903_101691183	All Organisms → cellular organisms → Bacteria → Proteobacteria	1204	Open in IMG/M
3300005764\|Ga0066903_101818282	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1164	Open in IMG/M
3300005764\|Ga0066903_102519468	Not Available	996	Open in IMG/M
3300005764\|Ga0066903_104432906	Not Available	749	Open in IMG/M
3300005764\|Ga0066903_104827415	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	717	Open in IMG/M
3300005764\|Ga0066903_105121698	Not Available	694	Open in IMG/M
3300005764\|Ga0066903_105387601	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	675	Open in IMG/M
3300005764\|Ga0066903_105598261	All Organisms → cellular organisms → Bacteria	661	Open in IMG/M
3300005764\|Ga0066903_107799050	Not Available	550	Open in IMG/M
3300006049\|Ga0075417_10199518	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	947	Open in IMG/M
3300006051\|Ga0075364_10882141	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	609	Open in IMG/M
3300006797\|Ga0066659_10671846	All Organisms → cellular organisms → Bacteria	845	Open in IMG/M
3300006844\|Ga0075428_101926389	Not Available	614	Open in IMG/M
3300006854\|Ga0075425_101392002	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	794	Open in IMG/M
3300006904\|Ga0075424_100280237	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1773	Open in IMG/M
3300007076\|Ga0075435_101790354	Not Available	539	Open in IMG/M
3300007255\|Ga0099791_10607946	Not Available	535	Open in IMG/M
3300009137\|Ga0066709_103877218	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	543	Open in IMG/M
3300009792\|Ga0126374_10110730	Not Available	1582	Open in IMG/M
3300009792\|Ga0126374_10153597	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1399	Open in IMG/M
3300009792\|Ga0126374_10174065	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1333	Open in IMG/M
3300010043\|Ga0126380_10685096	Not Available	821	Open in IMG/M
3300010043\|Ga0126380_11452162	Not Available	605	Open in IMG/M
3300010043\|Ga0126380_11601525	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium → unclassified Sphingobium → Sphingobium sp. HDIP04	581	Open in IMG/M
3300010046\|Ga0126384_10456487	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1092	Open in IMG/M
3300010046\|Ga0126384_10501885	Not Available	1046	Open in IMG/M
3300010046\|Ga0126384_10734199	Not Available	878	Open in IMG/M
3300010048\|Ga0126373_10930084	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	934	Open in IMG/M
3300010048\|Ga0126373_11459819	Not Available	749	Open in IMG/M
3300010358\|Ga0126370_10743635	Not Available	867	Open in IMG/M
3300010359\|Ga0126376_10771487	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	935	Open in IMG/M
3300010361\|Ga0126378_10330954	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1631	Open in IMG/M
3300010376\|Ga0126381_101181126	Not Available	1106	Open in IMG/M
3300010376\|Ga0126381_101313266	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1046	Open in IMG/M
3300010398\|Ga0126383_13402420	Not Available	520	Open in IMG/M
3300010863\|Ga0124850_1002683	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	5276	Open in IMG/M
3300012189\|Ga0137388_10882583	Not Available	827	Open in IMG/M
3300012198\|Ga0137364_10120699	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1868	Open in IMG/M
3300012199\|Ga0137383_10611677	Not Available	797	Open in IMG/M
3300012200\|Ga0137382_10570909	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	807	Open in IMG/M
3300012202\|Ga0137363_10036865	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3420	Open in IMG/M
3300012202\|Ga0137363_10280729	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1362	Open in IMG/M
3300012208\|Ga0137376_10858350	Not Available	780	Open in IMG/M
3300012285\|Ga0137370_10772246	Not Available	596	Open in IMG/M
3300012351\|Ga0137386_10952243	Not Available	613	Open in IMG/M
3300012353\|Ga0137367_10271773	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1217	Open in IMG/M
3300012354\|Ga0137366_10085888	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2391	Open in IMG/M
3300012358\|Ga0137368_10816006	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300012362\|Ga0137361_11809725	Not Available	529	Open in IMG/M
3300012363\|Ga0137390_10051519	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3994	Open in IMG/M
3300012582\|Ga0137358_10697086	Not Available	679	Open in IMG/M
3300012924\|Ga0137413_11552555	Not Available	540	Open in IMG/M
3300012948\|Ga0126375_10697509	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	790	Open in IMG/M
3300012971\|Ga0126369_12356380	Not Available	619	Open in IMG/M
3300012971\|Ga0126369_12781805	Not Available	572	Open in IMG/M
3300012972\|Ga0134077_10567029	Not Available	510	Open in IMG/M
3300012988\|Ga0164306_11269969	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	621	Open in IMG/M
3300016319\|Ga0182033_11197413	Not Available	680	Open in IMG/M
3300016319\|Ga0182033_12108323	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300016341\|Ga0182035_11801572	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	554	Open in IMG/M
3300016357\|Ga0182032_10291598	Not Available	1285	Open in IMG/M
3300016387\|Ga0182040_10215374	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1421	Open in IMG/M
3300016404\|Ga0182037_11717943	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	560	Open in IMG/M
3300018468\|Ga0066662_11780765	Not Available	644	Open in IMG/M
3300021168\|Ga0210406_10624130	Not Available	839	Open in IMG/M
3300021560\|Ga0126371_10906458	Not Available	1025	Open in IMG/M
3300021560\|Ga0126371_12334590	Not Available	646	Open in IMG/M
3300025910\|Ga0207684_11073725	Not Available	671	Open in IMG/M
3300025928\|Ga0207700_11020912	Not Available	740	Open in IMG/M
3300025928\|Ga0207700_12020648	Not Available	503	Open in IMG/M
3300026319\|Ga0209647_1034988	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2887	Open in IMG/M
3300026551\|Ga0209648_10033990	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4442	Open in IMG/M
3300027855\|Ga0209693_10119463	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1305	Open in IMG/M
3300027874\|Ga0209465_10069351	All Organisms → cellular organisms → Bacteria	1708	Open in IMG/M
3300031543\|Ga0318516_10413972	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	776	Open in IMG/M
3300031546\|Ga0318538_10061305	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1867	Open in IMG/M
3300031546\|Ga0318538_10564682	Not Available	617	Open in IMG/M
3300031546\|Ga0318538_10795280	Not Available	513	Open in IMG/M
3300031546\|Ga0318538_10819883	Not Available	505	Open in IMG/M
3300031564\|Ga0318573_10691151	Not Available	548	Open in IMG/M
3300031572\|Ga0318515_10740665	Not Available	519	Open in IMG/M
3300031573\|Ga0310915_10086549	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2094	Open in IMG/M
3300031573\|Ga0310915_10218344	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → Legionellaceae	1336	Open in IMG/M
3300031573\|Ga0310915_10289901	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1155	Open in IMG/M
3300031573\|Ga0310915_11162873	Not Available	534	Open in IMG/M
3300031573\|Ga0310915_11182623	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	529	Open in IMG/M
3300031640\|Ga0318555_10164061	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1192	Open in IMG/M
3300031640\|Ga0318555_10662769	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	564	Open in IMG/M
3300031679\|Ga0318561_10265226	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	937	Open in IMG/M
3300031681\|Ga0318572_10265193	Not Available	1011	Open in IMG/M
3300031681\|Ga0318572_10837926	Not Available	546	Open in IMG/M
3300031682\|Ga0318560_10250410	Not Available	951	Open in IMG/M
3300031719\|Ga0306917_10036120	All Organisms → cellular organisms → Bacteria	3223	Open in IMG/M
3300031719\|Ga0306917_10173981	All Organisms → cellular organisms → Bacteria	1614	Open in IMG/M
3300031719\|Ga0306917_10985286	Not Available	658	Open in IMG/M
3300031744\|Ga0306918_10909097	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	685	Open in IMG/M
3300031744\|Ga0306918_11190352	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → Methylosinus sporium	588	Open in IMG/M
3300031747\|Ga0318502_10971562	Not Available	517	Open in IMG/M
3300031748\|Ga0318492_10143869	All Organisms → cellular organisms → Bacteria	1199	Open in IMG/M
3300031748\|Ga0318492_10702842	Not Available	542	Open in IMG/M
3300031764\|Ga0318535_10038748	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1948	Open in IMG/M
3300031768\|Ga0318509_10019913	All Organisms → cellular organisms → Bacteria → Proteobacteria	3120	Open in IMG/M
3300031768\|Ga0318509_10792087	Not Available	524	Open in IMG/M
3300031770\|Ga0318521_10849020	Not Available	557	Open in IMG/M
3300031777\|Ga0318543_10096934	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1264	Open in IMG/M
3300031793\|Ga0318548_10550257	Not Available	562	Open in IMG/M
3300031794\|Ga0318503_10096629	Not Available	936	Open in IMG/M
3300031879\|Ga0306919_10023224	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3793	Open in IMG/M
3300031880\|Ga0318544_10111649	Not Available	1035	Open in IMG/M
3300031893\|Ga0318536_10675314	Not Available	515	Open in IMG/M
3300031910\|Ga0306923_11063947	Not Available	874	Open in IMG/M
3300031912\|Ga0306921_10155985	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2671	Open in IMG/M
3300031912\|Ga0306921_10415525	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1569	Open in IMG/M
3300031941\|Ga0310912_10481845	Not Available	967	Open in IMG/M
3300031941\|Ga0310912_11398237	Not Available	528	Open in IMG/M
3300031941\|Ga0310912_11532182	Not Available	501	Open in IMG/M
3300031942\|Ga0310916_11036415	Not Available	683	Open in IMG/M
3300031942\|Ga0310916_11136733	Not Available	648	Open in IMG/M
3300031954\|Ga0306926_10089127	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3765	Open in IMG/M
3300031954\|Ga0306926_10474306	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1540	Open in IMG/M
3300031954\|Ga0306926_12056903	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300031959\|Ga0318530_10057011	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1483	Open in IMG/M
3300032001\|Ga0306922_10125379	All Organisms → cellular organisms → Bacteria	2732	Open in IMG/M
3300032001\|Ga0306922_10234801	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1970	Open in IMG/M
3300032009\|Ga0318563_10089081	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Lacipirellulaceae → Botrimarina → Botrimarina colliarenosi	1620	Open in IMG/M
3300032025\|Ga0318507_10488011	Not Available	536	Open in IMG/M
3300032051\|Ga0318532_10274684	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → Methylosinus sporium	598	Open in IMG/M
3300032052\|Ga0318506_10031944	All Organisms → cellular organisms → Bacteria → Proteobacteria	2022	Open in IMG/M
3300032052\|Ga0318506_10467929	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	559	Open in IMG/M
3300032055\|Ga0318575_10007242	All Organisms → cellular organisms → Bacteria → Proteobacteria	4065	Open in IMG/M
3300032059\|Ga0318533_10317565	Not Available	1132	Open in IMG/M
3300032059\|Ga0318533_11256354	Not Available	541	Open in IMG/M
3300032063\|Ga0318504_10461436	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	607	Open in IMG/M
3300032066\|Ga0318514_10067933	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1757	Open in IMG/M
3300032066\|Ga0318514_10273972	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	890	Open in IMG/M
3300032076\|Ga0306924_11126752	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	854	Open in IMG/M
3300032261\|Ga0306920_100694770	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1499	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.43%
Host-Associated	Host-Associated	3.57%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.43%
Plants	Host-Associated → Plants	3.57%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.43%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.98%
Roots	Host-Associated → Plants → Roots	0.60%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	78.57%
Loam	Environmental → Terrestrial → Soil → Loam	17.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.98%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.60%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	45.24%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.90%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.14%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.36%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.98%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	1.19%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.60%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.60%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	28.57%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	13.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.10%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	10.71%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.12%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.57%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.57%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.57%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.19%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.60%
Green-Waste Compost	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Green-Waste Compost	0.60%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.60%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.60%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.60%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.60%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.60%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.60%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2070309004	Green-waste compost microbial communities at University of California, Davis, USA, from solid state bioreactor - Luquillo Rain Forest, Puerto Rico	Environmental	Open in IMG/M
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002911	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006051	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4	Host-Associated	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
prs_07333700	2070309004	Green-Waste Compost	MIFMRVHKHWLDYDVVALAFLVIGIAAVELLALIF
GPIPI_02514000	2088090014	Soil	MIFMRMPHKHWLDYDVAALAFLILGIAAVEVLAIIL
F24TB_104186791	3300000550	Soil	VVLIPQWSTIFMRVHTHWLDYDVAALAFLIVGIAAVGLLAIII*
AF_2010_repII_A01DRAFT_10366793	3300000580	Forest Soil	IRASRSFFNGRMIFMRVHKHWLDYDVVALPFLIIGIAAVELFAPIF*
AF_2010_repII_A01DRAFT_10752641	3300000580	Forest Soil	MIFMHVYKHWLDHDVAALAFLIVGIAAVELLAIII*
AF_2010_repII_A1DRAFT_101228902	3300000597	Forest Soil	MIFMRVHKYWLDYDLAALALLIIGMVAVELLALMM*
AF_2010_repII_A100DRAFT_10132111	3300000655	Forest Soil	WLVIRASRSFFNGRMIFMRVHKHWLDYDVVALAFLIIGIAAVELFALIF*
AF_2010_repII_A001DRAFT_100556462	3300000793	Forest Soil	SFFNGRMIFMRVHKHWLDYDVVALPFLIIGIAAVELFAPIF*
AF_2010_repII_A001DRAFT_101220401	3300000793	Forest Soil	MIFMRVHKHWLDYDVVALAFLIIGIAAVELFALIF*
JGI10216J12902_1049054713	3300000956	Soil	MIFMRVHKYWLEYDAAALAFLVVGIAVVGLLAIII*
JGI10216J12902_1071734861	3300000956	Soil	VHLAHLQWKMIFMRVHKYWLDYDVAAVAFLIVGIAVVGLLALII*
JGI12627J18819_103608091	3300001867	Forest Soil	FILNGETIFMRLYKHWLDHDVAALAFLILGMTAVELLAMII*
JGI25390J43892_100493133	3300002911	Grasslands Soil	MRPKRCNRRSTIFMRVHTHWLDYDVAALAFLIVGIAAVGLLAIII*
JGI25617J43924_102666951	3300002914	Grasslands Soil	KSVFIHSFILEWRMIFMRVDKHCLDYDVTALAFLIVGIAAVELIAIII*
Ga0066395_103702132	3300004633	Tropical Forest Soil	LILQWRMIFMPVYKHWLDYDVAALAFLIVGIAAVELIAIII*
Ga0066688_102639223	3300005178	Soil	HHSLIVQWGMTFMRVHTHWLECDAAAWTFLIVGIAAVGLLVIII*
Ga0066675_105671172	3300005187	Soil	CTSLITQWSTIFMRVHTHWLDYDVAAVAFLIVGIASVGLLAIII*
Ga0066388_1013930471	3300005332	Tropical Forest Soil	SLILAWGMIFVRVYKHWLDYDAAALAFLIVGIAAVGLLAIVI*
Ga0066388_1048885571	3300005332	Tropical Forest Soil	VQRWVTFMRVHTHWLDCDAAAWTFLIVGIAAVGLLVIII*
Ga0066388_1061030162	3300005332	Tropical Forest Soil	ASRSFFNGRMIFMRVHKHWLDYDVVALAFLVIAIAAVELLALIF*
Ga0008090_158517482	3300005363	Tropical Rainforest Soil	LVIRASRSFFNGRMIFMRVHKHWLDYDVVALAFLVIGIAAVELLALIF*
Ga0070714_1019267592	3300005435	Agricultural Soil	SLMSARWGTNLMRVQKYWLDYDLAALALLLIGLAAVEVLALVLI*
Ga0070713_1006556302	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MTSLFKGGMIFMGVYKHWLDYDAAALAFLIVGIAAVGLIAIII*
Ga0070713_1018225621	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MSARWGTNLMRVQKYWLDYDLAALALLLIGLAAVEVLALVLI*
Ga0070713_1024712461	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	SLILQRRMIFMRMPHKHWLDYDVAALAFLILGIAAVEVLAIIL*
Ga0070710_104774661	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MSARWGTNLMRVQKYWLDYDLAAVALLLIGLAAVEVLALVLI*
Ga0070706_1009340941	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MIFMRAHKHWLDYDVVALAFLIIGIAAVELFALIF*LQPHP
Ga0066905_1008130802	3300005713	Tropical Forest Soil	MIFMRVHKYWLDYDLAALALLIIGMAAVELLALIM*
Ga0066905_1019054451	3300005713	Tropical Forest Soil	LFDGMIFMRVRKYWLDYDAAALAFLIIGIAAIEVLALIIM*
Ga0066903_1006378632	3300005764	Tropical Forest Soil	MTFMRVHTHWLECDAAAWTFLIVGIAAVGLLVIII*
Ga0066903_1016911834	3300005764	Tropical Forest Soil	MTFMRVHTHWLECDAGAWTFLIVGIAAVGLLVIII*
Ga0066903_1018182823	3300005764	Tropical Forest Soil	MIFMRVHKHWLDYDVVALAFLVIGIAAVELLALIF*
Ga0066903_1025194681	3300005764	Tropical Forest Soil	FNGGMIFMHVYKHWLDHDVAALAFLIVGIAAVELLAIII*
Ga0066903_1044329062	3300005764	Tropical Forest Soil	LILQWRMIFMRVYKHWLDYDVAALAFLIGGIAAVELIAIII*
Ga0066903_1048274153	3300005764	Tropical Forest Soil	MILMRVYKHWLDYDVAALAFLIFGMAAVGLLAIII*
Ga0066903_1051216982	3300005764	Tropical Forest Soil	MIFMRVHKYWLDYDLAALALLIIGMAAVELLALMM*
Ga0066903_1053876012	3300005764	Tropical Forest Soil	MIFMRVHKHWLDYDVVALPFLIIGIAAVELFAPIF*
Ga0066903_1055982612	3300005764	Tropical Forest Soil	VHVARWRMIFMRVHKYWLDYDLAALALLIIGMAAVELLALMM*
Ga0066903_1077990501	3300005764	Tropical Forest Soil	LHGGMIFVRVYKHWLDYDAAALAFLIVGIAAVGLLAIII*
Ga0075417_101995181	3300006049	Populus Rhizosphere	CSPLIPQWSTIFMRVHIHWLDYDVAALAFLIVGIAAVGLLAIMI*
Ga0075364_108821412	3300006051	Populus Endosphere	IHHSLILQWGMIFMRVNKHWLDHDVAALAFLIVGIAAVELLAIII*
Ga0066659_106718462	3300006797	Soil	MIFMRVHKYWLEYDVAALAFLIVGLAAVGLLAMII*
Ga0075428_1019263892	3300006844	Populus Rhizosphere	LGLQRRRLLRGRKHWLEYDVAALVLLIVGMAAVGLLALMI*
Ga0075425_1013920021	3300006854	Populus Rhizosphere	MFFMRVHKYWLEYDAAALAFLIVGMAAVGLLAVVI*
Ga0075424_1002802373	3300006904	Populus Rhizosphere	CSRRRTRIFMRVHKYWLEHDPAALAFLIIGIAVVGLLAIII*
Ga0075435_1017903541	3300007076	Populus Rhizosphere	MLFMRVHKYWLEYDAAALAFLAVGMAVVGLLAIII*
Ga0099791_106079461	3300007255	Vadose Zone Soil	MIFMRVHKHWLDYDVAALAFLIVGIAAVEVLAIIL*
Ga0066709_1038772182	3300009137	Grasslands Soil	MLFMRVHKYWLEYDAAALAFLIVGIAAVGLLVIII*
Ga0126374_101107303	3300009792	Tropical Forest Soil	GGMIFMHVYKHWLDHDVAALAFLIVGIAAVELLAIII*
Ga0126374_101535972	3300009792	Tropical Forest Soil	MIFMPVYKHWLDYDVAALAFLIVGIAAVELIAIII*
Ga0126374_101740653	3300009792	Tropical Forest Soil	MILMRVHKHWLDYDVVALAFLIIGIAAVELVALIF*
Ga0126380_106850962	3300010043	Tropical Forest Soil	MILMRVHKHWLDYDVVALAFLIIGIAAVELFALIF*
Ga0126380_114521622	3300010043	Tropical Forest Soil	MIFVRVYKHWLDYDAAALAFLIVGIAAVGLLAIII*
Ga0126380_116015251	3300010043	Tropical Forest Soil	HHSLILAWGMIFVRVYKHWLDYDAAALAFLIVGIAAVELLAMII*
Ga0126384_104564872	3300010046	Tropical Forest Soil	MIFVRVYKHWLDYDAAALAFLIVGIAAVELLAMII*
Ga0126384_105018852	3300010046	Tropical Forest Soil	MIFMRALHKHWLDYDVAALAFLIVGIAAVEVLAIIL*
Ga0126384_107341992	3300010046	Tropical Forest Soil	MIFMRVHKHWLDYDVVALAFLIIGIAAVELVALIF*
Ga0126373_109300841	3300010048	Tropical Forest Soil	FQGCIHQSVFFNGGMIFMHVYKHWLDHDVAALAFLIVGIAAVELLAIII*
Ga0126373_114598191	3300010048	Tropical Forest Soil	IFMRVHKYWLDYDLAALALLIIGMAAVELLALMM*
Ga0126370_107436351	3300010358	Tropical Forest Soil	MIFMRVLHKHWLDYDVAALAFLIVGIAAVEVLAIIL*
Ga0126376_107714871	3300010359	Tropical Forest Soil	MIFMRTHKHWLDYDVAALAFLILGMAAVEVLAIIL*
Ga0126378_103309543	3300010361	Tropical Forest Soil	LAWGMIFVRVYKHWLDYDAAALAFLIVGIAVVGLLAIII*
Ga0126381_1011811261	3300010376	Tropical Forest Soil	MIFMRAYKHWLDHDVAALAFLIVGIAAVELLAAII*
Ga0126381_1013132661	3300010376	Tropical Forest Soil	NFQGCIHQSVFFNGGMIFMHVYKHWLDHDVAALAFLIVGIAAVELLAIII*
Ga0126383_134024201	3300010398	Tropical Forest Soil	WRMIFMRVHKYWLDYDLAALALLIIGMVAVELLALMM*
Ga0124850_10026836	3300010863	Tropical Forest Soil	GCIHQSVFFNGGMIFMHVYKHWLDHDVAALAFLIVGIAAVELLAIII*
Ga0137388_108825831	3300012189	Vadose Zone Soil	SVFIHSFILEWRMIFMRVDKHCLDYDVTALAFLIVGIAAVELIAIII*
Ga0137364_101206993	3300012198	Vadose Zone Soil	MIFMRVHKYWLEYDAAALAFLIVGIAVVELLAIII*
Ga0137383_106116772	3300012199	Vadose Zone Soil	MIFMRAHKHWLDYDVVALAFLIIGIAAVELFALIF*
Ga0137382_105709091	3300012200	Vadose Zone Soil	IPRSFFNGGTIFMRLYKHWLDHDVAALAFLIVGMTAVELLAMII*
Ga0137363_100368653	3300012202	Vadose Zone Soil	MIFMRVHKHWLDYDVAAVAFLIVGIAAVGLLALII*
Ga0137363_102807292	3300012202	Vadose Zone Soil	MIFMRVHKHWLDYDVVALAFLVVGIAAVELLALIF*
Ga0137376_108583501	3300012208	Vadose Zone Soil	MIIMRVLHKHWLDSDVAALAFLIVGLAAVEVLAIIL*
Ga0137370_107722461	3300012285	Vadose Zone Soil	MLFMRVHKYWLEYDAAALAFLIVGIAVVGLLAIII*
Ga0137386_109522431	3300012351	Vadose Zone Soil	MIFMRVLHKHWLDYDVAALAFLILGIAAVEVLAIIL*
Ga0137367_102717731	3300012353	Vadose Zone Soil	IFMRVHTHWLDYDVAALAFLIVGIAAVGLLAIII*
Ga0137366_100858883	3300012354	Vadose Zone Soil	HWCTSLITQWSTIFMRVHTHWLDYDVAAVAFLIVGIAAVGLLAIII*
Ga0137368_108160061	3300012358	Vadose Zone Soil	TSLIPQWSTIFMRVHKHWLDYDVAALAFLIVGIAAVGLLAIII*
Ga0137361_118097251	3300012362	Vadose Zone Soil	FIPRSFFNGGTIFMHVYKHWLDHDVAALAFLIVGMTAVELLAMII*
Ga0137390_100515194	3300012363	Vadose Zone Soil	MIFMRVDKHCLDYDVTALAFLIVGIAAVELIAIII*
Ga0137358_106970862	3300012582	Vadose Zone Soil	MIFMRVHKHWLDYDVVALAFLVIGIAVVELLALIF*
Ga0137413_115525551	3300012924	Vadose Zone Soil	MIFMRVHKHWLDYDVVALAFLVISIAAVELLALIF*
Ga0126375_106975094	3300012948	Tropical Forest Soil	MIFMMLHKHWLDYDVAALAFLIVGIAAVEVLAIIL*
Ga0126369_123563801	3300012971	Tropical Forest Soil	MENIFMRVHKYWLDYDLAALALLIIGMAAVELLALMM*
Ga0126369_127818052	3300012971	Tropical Forest Soil	MIFMRVRKYWLDYDLAALALLIIGMAAVELLALIM*
Ga0134077_105670291	3300012972	Grasslands Soil	QWSTIFMRVHTHWLDYDVAAVAFLIVGIASVGLLAIII*
Ga0164306_112699692	3300012988	Soil	FIPRSFFNGGTIFMRLYKHWLDHDVAALAFLIVGMTAVELLAMII*
Ga0164305_109477562	3300012989	Soil	RWGTNLMRVQKYWLDYDLAALALLLIGLAAVEVLALVLI*
Ga0182033_111974132	3300016319	Soil	MIFMRVHKHWLDYDVVALALLVIAIAAVELLTLIF
Ga0182033_121083231	3300016319	Soil	PRSFFNGGTIFMRVYKHWLDHDVAALAFLIVGMTAVELLAMII
Ga0182035_118015722	3300016341	Soil	NGGMIFMHVYKHWLDHDVAALAFLIVGIAAVELLAVII
Ga0182032_102915984	3300016357	Soil	FNGGMIFMHVYKHWLDHDVAALAFLIVGIAAVELLAIII
Ga0182040_102153741	3300016387	Soil	MIFMRVRKHWLDYDVVALAFLIIGIAAVELVALIF
Ga0182037_117179431	3300016404	Soil	MIFMRVHKHWLDYDVVALALLVIAIAAVELLALAF
Ga0066662_117807651	3300018468	Grasslands Soil	ILQWRMIFMRALHKHWLDYDVAALAFLIVGIAAVEVLAIIL
Ga0210406_106241302	3300021168	Soil	MIFMRVHKHWLDYDVVALAFLVISIAVVELLALIF
Ga0126371_109064582	3300021560	Tropical Forest Soil	QGCLHQSVFFNGGMIFMHVYKHWLDHDVAALAFLIVGIAAVELLAIII
Ga0126371_123345901	3300021560	Tropical Forest Soil	ETIFMRVYKHWLDHDVAALAFLIVGMTAVELLAMII
Ga0207684_110737251	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MIFMRAHKHWLDYDVVALAFLIIGIAAVELFALIF
Ga0207700_110209121	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MTSLFKGGMIFMGVYKHWLDYDAAALAFLIVGIAAVGLIAIII
Ga0207700_120206482	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	RSLILQRRMIFMRMPHKHWLDYDVAALAFLILGIAAVEVLAIIL
Ga0209647_10349887	3300026319	Grasslands Soil	FNGGTIFMRLYKHWLDHDVAALAFLIVGMTAVELLAMII
Ga0209648_100339902	3300026551	Grasslands Soil	MIFMRVHKYWLDYDLAALTLLIIGLAAVELLALII
Ga0209693_101194634	3300027855	Soil	FNGGTIFMRVYKHWLDHDVAALAFLIVGMTAVELLAMII
Ga0209465_100693511	3300027874	Tropical Forest Soil	MIFMRVHKYWLDYDLAALALLIIGMAAVELLALMM
Ga0318516_104139722	3300031543	Soil	FIHWLILQWRMIFMPVYKHWLDYDVAALAFLIVGIAAVELIAIII
Ga0318538_100613051	3300031546	Soil	IWLVIRASRSFFNGRMILMRVHKHWLDYDVVALAFLIIGIAAVELVALVF
Ga0318538_105646821	3300031546	Soil	MIFMPVYKHWLDYDVAALAFLIVGIAAVELIAIII
Ga0318538_107952802	3300031546	Soil	VFFNGGMIFMHVYKHWLDHDVAALAFLIVGIAAVELLAVII
Ga0318538_108198831	3300031546	Soil	MIFVRVYKHWLDYDVAALAFLICGIAAVELIAIII
Ga0318573_106911512	3300031564	Soil	FQGCIHQSVFINGGMIFMHVYKHWLDHDVAALAFLIVGIAAVELLAVII
Ga0318515_107406651	3300031572	Soil	NFQGCIHQSVFINGGMIFMHVYKHWLDHDVAALAFLIVGIAAVELLAVII
Ga0310915_100865496	3300031573	Soil	IHQSVFFNGGMIFMHVYKHWLDHDVAALAFLIVGIAAVELLAIII
Ga0310915_102183443	3300031573	Soil	MIFMRVHKYWLDHDLAALALLIIGMAAVELLALMM
Ga0310915_102899013	3300031573	Soil	MIFMRVHKHWLDYDVVALAFLIIGIAAVELFALIF
Ga0310915_111628732	3300031573	Soil	MIFMHVYKHWLDHDVAALAFLIVGIAAVELLAVII
Ga0310915_111826231	3300031573	Soil	MIFVRVYKHWLDYDAAALAFLIVGIAAVGLLAIII
Ga0318555_101640611	3300031640	Soil	VIRASRSFFNGRMIFMRVHKHWLDYDVVALAFLIIGIAAVELVALVF
Ga0318555_106627692	3300031640	Soil	QSVFINGGMIFMHVYKHWLDHDVAALAFLIVGIAAVELLAVII
Ga0318561_102652262	3300031679	Soil	VIRASRSFFNGRMILMRVHKHWLDYDVVALAFLIIGIAAVELVALVF
Ga0318572_102651931	3300031681	Soil	MILMRVHKHWLDYDVVALAFLIIGIAAVELVALIF
Ga0318572_108379262	3300031681	Soil	HQSVFINGGMIFMHVYKHWLDHDVAALAFLIVGIAAVELLAVII
Ga0318560_102504101	3300031682	Soil	SVFFNGGMIFMHVYKHWLDHDVAALAFLIVGIAAVELLAIII
Ga0306917_100361201	3300031719	Soil	VARWRMIFMRVHKYWLDYDLAALALLIIGMAAVELLALMM
Ga0306917_101739815	3300031719	Soil	NGGMIFMHVYKHWLDHDVAALAFLIVGIAAVELLAIII
Ga0306917_109852862	3300031719	Soil	LHSAHYSIGVTFMRVHTHWLECDAAAWTFLIVGIAAVGLLVIII
Ga0306918_109090972	3300031744	Soil	MIFMRVHKHWLDYDVVALALLVIAIAAVELLALIF
Ga0306918_111903523	3300031744	Soil	IHQSVFFNGGMIFMHVYKHWLDHDVAALAFLIVGIAAVELLAVII
Ga0318502_109715621	3300031747	Soil	VFINGGMIFMHVYKHWLDHDVAALAFLIVGIAAVELLAVII
Ga0318492_101438692	3300031748	Soil	MIFMRVHKHWLDYDVVALAFLIIGIAAVELVALIF
Ga0318492_107028421	3300031748	Soil	IGVTCMRVHKHWLECDAAAWTFLIVGIAAVGLLVIII
Ga0318535_100387481	3300031764	Soil	FFNGRMILMRVHKHWLDYDVVALAFLIIGIAAVELVALVF
Ga0318509_100199136	3300031768	Soil	LQWRMIFMRVKHWLDYDVAALALLIVGIAAVEVLAIIL
Ga0318509_107920871	3300031768	Soil	VFFNGGMIFMHVYKHWLDHDVAALAFLIVGIAAVELLAIII
Ga0318521_108490202	3300031770	Soil	LVFKSAFIHWLILQWRMIFMPVYKHWLDYDVAALAFLIVGIAAVELIAIII
Ga0318543_100969341	3300031777	Soil	MILMRVHKHWLDYDVVALAFLIIGIAAVELVALVF
Ga0318548_105502572	3300031793	Soil	CIHQSVFFNGGMIFMHVYKHWLDHDVAALAFLIVGIAAVELLAVII
Ga0318503_100966291	3300031794	Soil	CIHQSVFINGGMIFMHVYKHWLDHDVAALAFLIVGIAAVELLAIII
Ga0306919_100232241	3300031879	Soil	TIFMRVYKHWLDHDVAALAFLIVGIVAVELLAMII
Ga0318544_101116492	3300031880	Soil	MILMRVHKHWLDYDVVALAFLIIGIAAVELFALIF
Ga0318536_106753141	3300031893	Soil	MRVSPVEVLQWRMIFMRVKHWLDYDVAALALLIVGIAAVEVLAIIL
Ga0306923_110639472	3300031910	Soil	MIFMRVYEHWLDYDAAALAFLIVGIGAVELLAIII
Ga0306921_101559851	3300031912	Soil	NGRMILMRVHKHWLDYDVVALAFLIIGIAAVELVALVF
Ga0306921_104155255	3300031912	Soil	FFNGGMIFMHVYKHWLDHDVAALAFLIVGIAAVELLAIII
Ga0310912_104818453	3300031941	Soil	GMIFMRVYEHWLDYDAAALAFLIVGIGAVELLAIII
Ga0310912_113982371	3300031941	Soil	FNFQGCIHQSVFINGGMIFMHVYKHWLDHDVAALAFLIVGIAAVELLAVII
Ga0310912_115321821	3300031941	Soil	IIQWGMTFMRVHTHWLECDAAAWTFLIVGIAAVGLLVIII
Ga0310916_110364151	3300031942	Soil	AHYSIGVTFMRVHTHWLECDAAAWTFLIVGIAAVGLLVIII
Ga0310916_111367331	3300031942	Soil	RLHSAHYSIGVTFMRVHTHWLECDAAAWTFLIVGIAAVGLLVIII
Ga0306926_100891277	3300031954	Soil	MILMRVHKHWPDYDVVALAFLIIGIAAVELVALVF
Ga0306926_104743063	3300031954	Soil	RWRMIFMRVHKYWLDYDLAALALLIIGMAAVELLALMM
Ga0306926_120569032	3300031954	Soil	MIFMRVYKHWLDYDVAALAFLIVGIAAVELIAIII
Ga0318530_100570111	3300031959	Soil	WRMIFMRVHKYWLDYDLAALALLIIGMAAVELLALMM
Ga0306922_101253796	3300032001	Soil	HQSVFFNGGMIFMHVYKHWLDHDVAALAFLIVGIAAVELLAIII
Ga0306922_102348014	3300032001	Soil	HYSIGVTFMRVHTHWLECDAAAWTFLIVGIAAVGLLVIII
Ga0318563_100890812	3300032009	Soil	CIHQSVFINGGMIFMHVYKHWLDHDVAALAFLIVGIAAVELLAVII
Ga0318507_104880111	3300032025	Soil	FNGGMIFMHVYKHWLDHDVAALAFLIVGIAAVELLAVII
Ga0318532_102746843	3300032051	Soil	FQGCIHQSVFFNGGMIFMHVYKHWLDHDVAALAFLIVGIAAVELLAVII
Ga0318506_100319441	3300032052	Soil	RMIFMRVHKYWLDYDLAALALLIIGMAAVELLALMM
Ga0318506_104679291	3300032052	Soil	SVFFNGGMIFMHVYKHWLDHDVAALAFLIVGIAAVELLAVII
Ga0318575_100072421	3300032055	Soil	STGNDMRVYKHWLDHDVAALAFLIVGIAAVELLAIII
Ga0318533_103175653	3300032059	Soil	FIHWLILQWRMIFVRVYKHWLDYDVAALAFLICGIAAVELIAIII
Ga0318533_112563542	3300032059	Soil	GTIFMRVYKHWLDHDVAALAFLIVGIAAVELLAMII
Ga0318504_104614361	3300032063	Soil	WLVIRASRSFFNGKMIFMRVRKHWLDYDVVALAFLIIGIAAVELVALIF
Ga0318514_100679333	3300032066	Soil	LVIRASRSFFNGRMIFMRVRKHWLDYDVVALAFLIIGIAAVELVALIF
Ga0318514_102739722	3300032066	Soil	LILQWRMIFMPVYKHWLDYDVAALAFLIVGIAAVELIAIII
Ga0306924_111267524	3300032076	Soil	MIFMRVRKNWLDYDIAAVTLLMIGLAAVELLAFVIN
Ga0306920_1006947701	3300032261	Soil	CIHQSVFFNGGMIFMHVYKHWLDHDVAALAFLIVGIAAVELLAIII

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F037136

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences