Metagenome / Metatranscriptome Family F037311

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F037311
Family Type	Metagenome / Metatranscriptome
Number of Sequences	168
Average Sequence Length	54 residues
Representative Sequence	MAATNLELIENRRSELQAAFLAFGSVSEQLSGAFDSLRGQVAQLRAEL
Number of Associated Samples	139
Number of Associated Scaffolds	168

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	8.93 %
% of genes near scaffold ends (potentially truncated)	98.21 %
% of genes from short scaffolds (< 2000 bps)	94.64 %
Associated GOLD sequencing projects	127
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.60

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (69.643 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (20.833 % of family members)
Environment Ontology (ENVO)	Unclassified (31.548 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (61.310 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 60.53% β-sheet: 0.00% Coil/Unstructured: 39.47%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.60
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.60
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 168 Family Scaffolds
PF02954	HTH_8	89.88
PF06490	FleQ	5.36
PF02561	FliS	1.19
PF00158	Sigma54_activat	0.60
PF02874	ATP-synt_ab_N	0.60
PF16823	tPilZ	0.60
PF01514	YscJ_FliF	0.60
PF07195	FliD_C	0.60
PF02518	HATPase_c	0.60

COG ID	Name	Functional Category	% Frequency in 168 Family Scaffolds
COG2204	DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains	Signal transduction mechanisms [T]	5.36
COG1516	Flagellin-specific chaperone FliS	Cell motility [N]	3.57
COG1345	Flagellar capping protein FliD	Cell motility [N]	0.60

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.64 %
All Organisms	root	All Organisms	30.36 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.64 %
cellular organisms	root	All Organisms → cellular organisms	30.36 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.64 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	30.36 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.64 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	29.17 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.64 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	19.05 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.98 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.64 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	5.95 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.98 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	1.79 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.60 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.64 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	5.95 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.79 %
unclassified Xanthomonadales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales	1.19 %
Burkholderiales genera incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis	1.19 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.60 %
Rhodanobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	0.60 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.64 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	5.95 %
Burkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	1.79 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	1.19 %
Methylibium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Methylibium	1.19 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.60 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.60 %
Rhodanobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.64 %
Pseudomonas syringae group	species group	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group	5.36 %
Burkholderia cepacia complex	species group	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → Burkholderia cepacia complex	1.19 %
unclassified Methylibium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Methylibium → unclassified Methylibium	1.19 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	1.19 %
Pseudomonas fluorescens group	species group	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas fluorescens group	0.60 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.60 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.60 %
Rhodanobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.64 %
Pseudomonas syringae group genomosp. 2	species subgroup	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group → Pseudomonas syringae group genomosp. 2	5.36 %
Methylibium sp. T29	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Methylibium → unclassified Methylibium → Methylibium sp. T29	1.19 %
Burkholderia cepacia complex	species group	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → Burkholderia cepacia complex	1.19 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	1.19 %
Pseudomonas fluorescens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas fluorescens group → Pseudomonas fluorescens	0.60 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.60 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.60 %
Rhodanobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.64 %
Pseudomonas savastanoi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group → Pseudomonas syringae group genomosp. 2 → Pseudomonas savastanoi	5.36 %
Methylibium sp. T29	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Methylibium → unclassified Methylibium → Methylibium sp. T29	1.19 %
Burkholderia cepacia complex	species group	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → Burkholderia cepacia complex	1.19 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	1.19 %
Pseudomonas fluorescens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas fluorescens group → Pseudomonas fluorescens	0.60 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.60 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.60 %
Rhodanobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	0.60 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000546\|LJNas_1020507	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	705	Open in IMG/M
3300001151\|JGI12713J13577_1022481	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	534	Open in IMG/M
3300001593\|JGI12635J15846_10805327	Not Available	538	Open in IMG/M
3300002245\|JGIcombinedJ26739_101706017	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	529	Open in IMG/M
3300003219\|JGI26341J46601_10098306	Not Available	856	Open in IMG/M
3300004082\|Ga0062384_100884084	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	631	Open in IMG/M
3300004082\|Ga0062384_101121256	All Organisms → cellular organisms → Bacteria → Proteobacteria	568	Open in IMG/M
3300004091\|Ga0062387_101603683	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	525	Open in IMG/M
3300004092\|Ga0062389_100413757	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1471	Open in IMG/M
3300004092\|Ga0062389_101194895	All Organisms → cellular organisms → Bacteria → Proteobacteria	946	Open in IMG/M
3300004152\|Ga0062386_100482712	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1005	Open in IMG/M
3300004635\|Ga0062388_101406203	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	701	Open in IMG/M
3300005563\|Ga0068855_100950803	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	905	Open in IMG/M
3300005602\|Ga0070762_10845883	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	621	Open in IMG/M
3300005712\|Ga0070764_10371532	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	839	Open in IMG/M
3300005950\|Ga0066787_10054987	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	773	Open in IMG/M
3300006176\|Ga0070765_100619112	All Organisms → cellular organisms → Bacteria → Proteobacteria	1021	Open in IMG/M
3300006176\|Ga0070765_101530568	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	628	Open in IMG/M
3300006893\|Ga0073928_10261267	All Organisms → cellular organisms → Bacteria → Proteobacteria	1319	Open in IMG/M
3300009088\|Ga0099830_11113061	Not Available	655	Open in IMG/M
3300009522\|Ga0116218_1514455	Not Available	533	Open in IMG/M
3300009627\|Ga0116109_1180192	Not Available	504	Open in IMG/M
3300009665\|Ga0116135_1145782	Not Available	882	Open in IMG/M
3300009701\|Ga0116228_10935672	Not Available	578	Open in IMG/M
3300009709\|Ga0116227_10753674	Not Available	735	Open in IMG/M
3300009759\|Ga0116101_1198903	Not Available	511	Open in IMG/M
3300011120\|Ga0150983_13788560	Not Available	562	Open in IMG/M
3300011271\|Ga0137393_11122559	Not Available	668	Open in IMG/M
3300012924\|Ga0137413_10071903	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	2075	Open in IMG/M
3300012927\|Ga0137416_10664718	Not Available	913	Open in IMG/M
3300012927\|Ga0137416_10746567	Not Available	862	Open in IMG/M
3300012929\|Ga0137404_11564284	Not Available	611	Open in IMG/M
3300012930\|Ga0137407_10076923	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2799	Open in IMG/M
3300012930\|Ga0137407_10260543	Not Available	1574	Open in IMG/M
3300014156\|Ga0181518_10124767	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1408	Open in IMG/M
3300014159\|Ga0181530_10466210	Not Available	634	Open in IMG/M
3300014165\|Ga0181523_10593499	Not Available	608	Open in IMG/M
3300014489\|Ga0182018_10402981	Not Available	731	Open in IMG/M
3300014495\|Ga0182015_10326667	Not Available	999	Open in IMG/M
3300014501\|Ga0182024_10966679	Not Available	1019	Open in IMG/M
3300014638\|Ga0181536_10030786	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3987	Open in IMG/M
3300014657\|Ga0181522_10406228	Not Available	815	Open in IMG/M
3300017946\|Ga0187879_10751992	Not Available	543	Open in IMG/M
3300017948\|Ga0187847_10764149	Not Available	546	Open in IMG/M
3300017948\|Ga0187847_10802493	Not Available	533	Open in IMG/M
3300018018\|Ga0187886_1344922	Not Available	550	Open in IMG/M
3300018022\|Ga0187864_10189191	Not Available	984	Open in IMG/M
3300018026\|Ga0187857_10017273	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4161	Open in IMG/M
3300018043\|Ga0187887_10353047	Not Available	868	Open in IMG/M
3300019787\|Ga0182031_1140876	Not Available	669	Open in IMG/M
3300020004\|Ga0193755_1160157	All Organisms → cellular organisms → Bacteria → Proteobacteria	676	Open in IMG/M
3300020021\|Ga0193726_1011446	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4751	Open in IMG/M
3300020199\|Ga0179592_10408682	Not Available	591	Open in IMG/M
3300020579\|Ga0210407_11118428	Not Available	596	Open in IMG/M
3300020580\|Ga0210403_10043579	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3587	Open in IMG/M
3300020580\|Ga0210403_10402439	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group → Pseudomonas syringae group genomosp. 2 → Pseudomonas savastanoi	1118	Open in IMG/M
3300020581\|Ga0210399_10782219	All Organisms → cellular organisms → Bacteria → Proteobacteria	780	Open in IMG/M
3300020581\|Ga0210399_11490631	Not Available	525	Open in IMG/M
3300020583\|Ga0210401_10250688	All Organisms → cellular organisms → Bacteria → Proteobacteria	1630	Open in IMG/M
3300020583\|Ga0210401_11564487	Not Available	517	Open in IMG/M
3300021088\|Ga0210404_10248652	Not Available	967	Open in IMG/M
3300021168\|Ga0210406_10398209	Not Available	1103	Open in IMG/M
3300021168\|Ga0210406_10413690	Not Available	1078	Open in IMG/M
3300021171\|Ga0210405_10571932	Not Available	881	Open in IMG/M
3300021178\|Ga0210408_10224395	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → Burkholderia cepacia complex	1496	Open in IMG/M
3300021181\|Ga0210388_10346907	Not Available	1305	Open in IMG/M
3300021181\|Ga0210388_10739405	Not Available	855	Open in IMG/M
3300021401\|Ga0210393_11534904	Not Available	529	Open in IMG/M
3300021402\|Ga0210385_10420668	Not Available	1006	Open in IMG/M
3300021403\|Ga0210397_11632850	Not Available	500	Open in IMG/M
3300021406\|Ga0210386_11595491	Not Available	542	Open in IMG/M
3300021407\|Ga0210383_11050066	Not Available	689	Open in IMG/M
3300021407\|Ga0210383_11213903	Not Available	633	Open in IMG/M
3300021407\|Ga0210383_11780171	Not Available	503	Open in IMG/M
3300021420\|Ga0210394_11829997	Not Available	505	Open in IMG/M
3300021433\|Ga0210391_11554715	Not Available	506	Open in IMG/M
3300021474\|Ga0210390_10642422	Not Available	887	Open in IMG/M
3300021474\|Ga0210390_10893071	Not Available	731	Open in IMG/M
3300021475\|Ga0210392_10620746	Not Available	802	Open in IMG/M
3300021477\|Ga0210398_10927317	Not Available	697	Open in IMG/M
3300021477\|Ga0210398_11090372	Not Available	634	Open in IMG/M
3300021478\|Ga0210402_10068245	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → Burkholderia cepacia complex	3139	Open in IMG/M
3300021479\|Ga0210410_10230456	Not Available	1660	Open in IMG/M
3300021479\|Ga0210410_11665575	Not Available	531	Open in IMG/M
3300022712\|Ga0242653_1106120	Not Available	519	Open in IMG/M
3300022726\|Ga0242654_10119148	Not Available	850	Open in IMG/M
3300022730\|Ga0224570_108155	Not Available	648	Open in IMG/M
3300024254\|Ga0247661_1089455	Not Available	579	Open in IMG/M
3300024295\|Ga0224556_1087667	Not Available	763	Open in IMG/M
3300024330\|Ga0137417_1048274	Not Available	807	Open in IMG/M
3300025633\|Ga0208480_1021407	All Organisms → cellular organisms → Bacteria → Proteobacteria	1925	Open in IMG/M
3300025949\|Ga0207667_11928031	Not Available	552	Open in IMG/M
3300026294\|Ga0209839_10178102	Not Available	691	Open in IMG/M
3300026304\|Ga0209240_1239525	Not Available	553	Open in IMG/M
3300026557\|Ga0179587_10111745	Not Available	1666	Open in IMG/M
3300027066\|Ga0208236_1005298	All Organisms → cellular organisms → Bacteria → Proteobacteria	799	Open in IMG/M
3300027176\|Ga0208992_1004352	Not Available	1613	Open in IMG/M
3300027307\|Ga0209327_1063310	Not Available	542	Open in IMG/M
3300027496\|Ga0208987_1050879	Not Available	744	Open in IMG/M
3300027545\|Ga0209008_1017991	Not Available	1658	Open in IMG/M
3300027603\|Ga0209331_1140672	Not Available	576	Open in IMG/M
3300027609\|Ga0209221_1161777	Not Available	553	Open in IMG/M
3300027610\|Ga0209528_1143098	Not Available	524	Open in IMG/M
3300027634\|Ga0209905_1013859	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas fluorescens group → Pseudomonas fluorescens	1078	Open in IMG/M
3300027652\|Ga0209007_1185434	Not Available	511	Open in IMG/M
3300027660\|Ga0209736_1165233	Not Available	584	Open in IMG/M
3300027727\|Ga0209328_10267514	Not Available	508	Open in IMG/M
3300027768\|Ga0209772_10013722	Not Available	2246	Open in IMG/M
3300027817\|Ga0209112_10382884	Not Available	503	Open in IMG/M
3300027869\|Ga0209579_10481118	Not Available	674	Open in IMG/M
3300027884\|Ga0209275_10424203	Not Available	752	Open in IMG/M
3300027895\|Ga0209624_11125107	Not Available	505	Open in IMG/M
3300027908\|Ga0209006_10729483	Not Available	809	Open in IMG/M
3300027908\|Ga0209006_11525581	Not Available	505	Open in IMG/M
3300028036\|Ga0265355_1007425	Not Available	867	Open in IMG/M
3300028742\|Ga0302220_10163797	Not Available	842	Open in IMG/M
3300028762\|Ga0302202_10435503	Not Available	602	Open in IMG/M
3300028775\|Ga0302231_10268393	Not Available	714	Open in IMG/M
3300028795\|Ga0302227_10276945	Not Available	640	Open in IMG/M
3300028877\|Ga0302235_10093380	Not Available	1376	Open in IMG/M
3300028879\|Ga0302229_10396827	Not Available	614	Open in IMG/M
3300028906\|Ga0308309_10178617	All Organisms → cellular organisms → Bacteria → Proteobacteria	1732	Open in IMG/M
3300028906\|Ga0308309_10871274	Not Available	782	Open in IMG/M
3300029882\|Ga0311368_10177884	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group → Pseudomonas syringae group genomosp. 2 → Pseudomonas savastanoi	1708	Open in IMG/M
3300029907\|Ga0311329_10744144	Not Available	631	Open in IMG/M
3300029907\|Ga0311329_10802988	Not Available	600	Open in IMG/M
3300029910\|Ga0311369_10241980	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	1647	Open in IMG/M
3300029911\|Ga0311361_10216471	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group → Pseudomonas syringae group genomosp. 2 → Pseudomonas savastanoi	2320	Open in IMG/M
3300029922\|Ga0311363_11200550	Not Available	640	Open in IMG/M
3300029922\|Ga0311363_11621710	Not Available	509	Open in IMG/M
3300029945\|Ga0311330_10229053	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group → Pseudomonas syringae group genomosp. 2 → Pseudomonas savastanoi	1665	Open in IMG/M
3300030007\|Ga0311338_10808491	Not Available	933	Open in IMG/M
3300030013\|Ga0302178_10086470	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Methylibium → unclassified Methylibium → Methylibium sp. T29	1637	Open in IMG/M
3300030399\|Ga0311353_10216230	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group → Pseudomonas syringae group genomosp. 2 → Pseudomonas savastanoi	1793	Open in IMG/M
3300030503\|Ga0311370_12094843	Not Available	561	Open in IMG/M
3300030520\|Ga0311372_11614353	Not Available	789	Open in IMG/M
3300030580\|Ga0311355_10684687	Not Available	956	Open in IMG/M
3300030617\|Ga0311356_10405932	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Methylibium → unclassified Methylibium → Methylibium sp. T29	1344	Open in IMG/M
3300030618\|Ga0311354_10856276	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	852	Open in IMG/M
3300030618\|Ga0311354_11297644	Not Available	653	Open in IMG/M
3300030693\|Ga0302313_10080449	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group → Pseudomonas syringae group genomosp. 2 → Pseudomonas savastanoi	1376	Open in IMG/M
3300030693\|Ga0302313_10196077	Not Available	814	Open in IMG/M
3300030739\|Ga0302311_10257546	Not Available	1288	Open in IMG/M
3300030838\|Ga0311335_11367327	Not Available	510	Open in IMG/M
3300030872\|Ga0265723_1030908	Not Available	517	Open in IMG/M
3300030916\|Ga0075386_11765340	Not Available	544	Open in IMG/M
3300031057\|Ga0170834_100188343	Not Available	535	Open in IMG/M
3300031090\|Ga0265760_10101869	All Organisms → cellular organisms → Bacteria	908	Open in IMG/M
3300031128\|Ga0170823_15230234	Not Available	622	Open in IMG/M
3300031232\|Ga0302323_102274447	Not Available	618	Open in IMG/M
3300031234\|Ga0302325_13309177	Not Available	511	Open in IMG/M
3300031261\|Ga0302140_10950243	Not Available	597	Open in IMG/M
3300031525\|Ga0302326_11038984	Not Available	1146	Open in IMG/M
3300031525\|Ga0302326_11871386	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	782	Open in IMG/M
3300031525\|Ga0302326_13295802	Not Available	542	Open in IMG/M
3300031708\|Ga0310686_108152118	Not Available	558	Open in IMG/M
3300031708\|Ga0310686_111901651	All Organisms → cellular organisms → Bacteria → Proteobacteria	721	Open in IMG/M
3300031708\|Ga0310686_117778115	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1819	Open in IMG/M
3300031712\|Ga0265342_10452374	Not Available	659	Open in IMG/M
3300031715\|Ga0307476_10127775	All Organisms → cellular organisms → Bacteria → Proteobacteria	1815	Open in IMG/M
3300031715\|Ga0307476_10146657	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group → Pseudomonas syringae group genomosp. 2 → Pseudomonas savastanoi	1692	Open in IMG/M
3300031715\|Ga0307476_10179845	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group → Pseudomonas syringae group genomosp. 2 → Pseudomonas savastanoi	1530	Open in IMG/M
3300031715\|Ga0307476_11087733	Not Available	587	Open in IMG/M
3300031718\|Ga0307474_10350206	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group → Pseudomonas syringae group genomosp. 2 → Pseudomonas savastanoi	1144	Open in IMG/M
3300031754\|Ga0307475_10581428	Not Available	897	Open in IMG/M
3300031902\|Ga0302322_101031910	Not Available	992	Open in IMG/M
3300033826\|Ga0334847_032104	Not Available	592	Open in IMG/M
3300033887\|Ga0334790_153614	Not Available	690	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.24%
Host-Associated	Host-Associated	4.76%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.36%
Aquatic	Environmental → Aquatic	14.88%
Plants	Host-Associated → Plants	4.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	58.33%
Peat	Environmental → Terrestrial → Peat	22.02%
Freshwater	Environmental → Aquatic → Freshwater	14.29%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.79%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.79%
Peat Moss	Host-Associated → Plants → Peat Moss	1.19%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.60%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	38.69%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	22.02%
Loam	Environmental → Terrestrial → Soil → Loam	15.48%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	14.29%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.17%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.19%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.19%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified	1.19%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.60%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.60%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	25.60%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	22.02%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	15.48%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	12.50%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	11.90%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	4.17%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.19%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.19%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified	1.19%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.60%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.60%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.60%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.60%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	20.83%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	13.69%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	11.31%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.55%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	5.36%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	4.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.17%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.17%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.57%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	3.57%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.98%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	2.98%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.79%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.79%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.19%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	1.19%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	1.19%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.19%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.19%
Host-Associated	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated	1.19%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.60%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.60%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.60%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.60%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.60%
Thawing Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost	0.60%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.60%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.60%
Quercus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Quercus Rhizosphere	0.60%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.60%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000546	Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJN_Illumina_Assembled	Host-Associated	Open in IMG/M
3300001151	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O3	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003219	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005950	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009627	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_10	Environmental	Open in IMG/M
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental	Open in IMG/M
3300009701	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum fallax MG	Host-Associated	Open in IMG/M
3300009709	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fb - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300009759	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_10	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014638	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaG	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300018018	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_150	Environmental	Open in IMG/M
3300018022	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_40	Environmental	Open in IMG/M
3300018026	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_100	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300019787	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (PacBio error correction)	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022712	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-32-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022730	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU2	Host-Associated	Open in IMG/M
3300024254	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK02	Environmental	Open in IMG/M
3300024295	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 1-5	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025633	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026294	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027066	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF005 (SPAdes)	Environmental	Open in IMG/M
3300027176	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_O1 (SPAdes)	Environmental	Open in IMG/M
3300027307	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027496	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027603	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027609	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027610	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027634	Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 812S1M	Environmental	Open in IMG/M
3300027652	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027660	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027727	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027768	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027817	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028036	Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE2	Host-Associated	Open in IMG/M
3300028742	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_3	Environmental	Open in IMG/M
3300028762	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_3	Environmental	Open in IMG/M
3300028775	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_2	Environmental	Open in IMG/M
3300028795	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_1	Environmental	Open in IMG/M
3300028877	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_3	Environmental	Open in IMG/M
3300028879	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_3	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029882	III_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029907	I_Bog_N1 coassembly	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300029911	III_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029922	III_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029945	I_Bog_N2 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030013	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_3	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030693	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_2	Environmental	Open in IMG/M
3300030739	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_3	Environmental	Open in IMG/M
3300030838	I_Fen_N1 coassembly	Environmental	Open in IMG/M
3300030872	Metatranscriptome of plant litter microbial communities from Maridalen valley, Oslo, Norway - NLI5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030916	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031261	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_1	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031712	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG	Host-Associated	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300033826	Peat soil microbial communities from Stordalen Mire, Sweden - 714 E2 1-5	Environmental	Open in IMG/M
3300033887	Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-1-X1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
LJNas_10205072	3300000546	Quercus Rhizosphere	MAATQLDLIENRRSELHAAFLAFGSVSEQLSGAFDSLRSQVAQLRADLGEAHAGRDHLAARL
JGI12713J13577_10224812	3300001151	Forest Soil	MAATKLELIENRRSELQAAFLAFGSVSDQLSGAFDSLRAELAQLRADLSEAHAGKE
JGI12635J15846_108053271	3300001593	Forest Soil	METIDEGRADLHAAFLAFGSVSEQLSGAFDSLRGEVTRLTLQLQESEAGSADLAARLAALVNGIPG
JGIcombinedJ26739_1017060171	3300002245	Forest Soil	MAATKLELIENRRTELQAAFLAFGSVSEQLSGAFDSLRSQVAQLRADLGEAHAGREHLAARLSALVKGLP
JGI26341J46601_100983062	3300003219	Bog Forest Soil	MQTSELDSINCSRTQLHAAFVAFGSVSEHLSEAFDCLRAEVAQLRTQLDEAHAGNEHLAARLAALL
Ga0062384_1008840841	3300004082	Bog Forest Soil	MRAQKLLSSERMAATSLDLIDNQRSELKAAFRAFGSISEQLAGAYEALRAQVAELHIELGEARAGKEHLAARLSA
Ga0062384_1011212561	3300004082	Bog Forest Soil	MAANKLALIENRRSELQAAFLAFGSVSEQLSGAFESLRGQVAQLRGELLEAQAGRDHLAARLSALIKGLP
Ga0062387_1016036831	3300004091	Bog Forest Soil	LLSSLHMAASVELIENQRSELQAAFRAFGSVSEQLSGAFDALRAQVAQLRLELSEAHAGKEHLAARLSALI
Ga0062389_1004137571	3300004092	Bog Forest Soil	LLSSLHMAASVELIENQRSELQAAFRAFGSVSEQLSGAFDALRAQVAQLRLELSEAHAGKEHLAARLSALIEG
Ga0062389_1011948951	3300004092	Bog Forest Soil	MAANPLDLIDSQRSELTAAFRAFGSVSEQLSGAFDALRGQVAELRHELGEAHAGNEHL
Ga0062386_1004827122	3300004152	Bog Forest Soil	MAATNLELIENRRSELQAAFLAFGSVSQQLSGAFESLRGQV
Ga0062388_1014062032	3300004635	Bog Forest Soil	LIGSVNTGKAQKLLSTSGMAATKFELIENRRSELQAAFLAFGSVSEQLSGAFESLRGQVAELQSELGEARAGRE
Ga0068855_1009508031	3300005563	Corn Rhizosphere	MAASPLELIENRRSELQAAFLAFGAVSEQLSGAFDSLRAQVAQLRAELGEARAGKEHLAA
Ga0070762_108458832	3300005602	Soil	MAATNLEPTDHQRSELQAAFRAFGTVSQQLSGAFDLLRSQVAQLQRELIEARAGREHLAARLSALVE
Ga0070764_103715322	3300005712	Soil	LLCSGHMAATPLDLIDNQRSELQAAFRAFGSVSEQLAGAYDALRAQVAQLHIELGE
Ga0066787_100549872	3300005950	Soil	MAATHLDLIENRRSELQAAFLAFGSVSEQLSGAFDSLRTQVAQLRADLNEAHAGKEHLA
Ga0070765_1006191121	3300006176	Soil	MAATSQEITQGLVDNSRSELTAAFRAFGSVSEQLSGAFDALRGQVAQLRHEL
Ga0070765_1015305682	3300006176	Soil	MAAQMEMLEDRRAELRAAFQAFGSVSEQLSGAFDSLRAEVARLRSQLQE
Ga0073928_102612672	3300006893	Iron-Sulfur Acid Spring	MAATQLELIENRRSELQAAFLAFGSVSDQLSGAFDSLRAEVAQLRVELGEAHAGKEHLAGRLSALIKGL
Ga0099830_111130612	3300009088	Vadose Zone Soil	MAATNLELIENRRSELQAAFLAFGSVSEQLSGAFDSLRAQVAELRAEL
Ga0116218_15144552	3300009522	Peatlands Soil	MQTRELESMHSSRAELQAAFLAFGSVSEQLSEAFDALRDEVAQLRAQLD
Ga0116109_11801921	3300009627	Peatland	MAATKLELIENRRSELQAAFLAFGSVSDQLSGAFESLSAE
Ga0116135_11457821	3300009665	Peatland	MAANLLDPVDTQRSELTAAFRAFGSVSEQLSGAFDALRAQVAQLRLELGEAHAGNEHLAGRLSA
Ga0116228_109356721	3300009701	Host-Associated	MAVNKVELIENRRAELQAAFHAFGSVSEQLSGAFDSLRAQVAQLRTELSEAHAGKEHLAARLSALITG
Ga0116227_107536742	3300009709	Host-Associated	MAANNLDILDTQRSELQAAFQAFGSVSAQLAGAFDALRDQVARLRRELGEANSGKEHLAA
Ga0116101_11989032	3300009759	Peatland	MAATKLELIENRRSELQAAFRAFGSVSEHLSGAFDSLRDQVARLSSELSQAHAGRDHVAARLS
Ga0150983_137885602	3300011120	Forest Soil	MAAQMEMLEDRRAELRAAFQAFGSVSEQLSGAFDSLRAEVD
Ga0137393_111225591	3300011271	Vadose Zone Soil	MAATKLEPIENRRSELQAAFLAFGTVSDQLSDAFDSLRGEVAQLRTDLSAAHAGK
Ga0137413_100719032	3300012924	Vadose Zone Soil	MAATKLALIENRRSELQAAFLAFGSVSDQLSGAFDSLSGEVVQLRAALVEAHAGK*
Ga0137416_106647181	3300012927	Vadose Zone Soil	MAATNLDHLDNKRTELQAAFLAFGSVSEQLSGAFDALRDQVAQLRGELHEANTGKQHLAARL
Ga0137416_107465671	3300012927	Vadose Zone Soil	LLSFSGMAATQLDLIENRRSELQAAFLAFGSVSEQLSGAFDSLRAEVAQLRAQLGEAHAGKEHLAARLSALIKGLPG
Ga0137404_115642842	3300012929	Vadose Zone Soil	MAATQLDLIENRRSELHAAFLAFGSVSEQLSGAFDSLRSQVAQLRADLGEAHAGRDHLAARLSALL
Ga0137407_100769233	3300012930	Vadose Zone Soil	MAATHLELIENRRSELQAAFLAFGSVSEQLSGAFDALRAQVADLRAEL
Ga0137407_102605431	3300012930	Vadose Zone Soil	MAATHLELIENRRSELQAAFLAFGSVSEQLSGAFDSLRAQVAELRAELGEAHA
Ga0181518_101247672	3300014156	Bog	MQTTELESMHSSRAELQAAFLAFGSVSEQLSGAFDALRDEVAQLRAQLDEAHAGKEHLA
Ga0181530_104662101	3300014159	Bog	MAATPLELIDAQRSELKAAFRAFGSVSEQLSSAFDSLRSQVAQLRLELGEAHAGKEHLA
Ga0181523_105934992	3300014165	Bog	MAATNLEPTDRQRSELQAAFRAFGTVSQQLSGAFDSLRSQVA
Ga0182018_104029812	3300014489	Palsa	LIGWRNSAKAQKLLSSWRMAATSLESIDNQRSELQAAFRAFGSVSEQLSGAFDALRGQVAQLRLELGEARAGKQ
Ga0182015_103266671	3300014495	Palsa	MAASKLELIENRRSELQAAFLAFGSVSEQLSGAFDSLRSQVAELRAEL
Ga0182024_109666792	3300014501	Permafrost	LIGGENTAKAQKLLSSSGMAATKLDLIENRRSELQAAFLAFGSVSEQLSGAFDSLRAQVAQLRVELGEA
Ga0181536_100307865	3300014638	Bog	MAANPKDLVDTQRSELTAAFRAFGSVSEQLSGAFEALRAQVAQLRH*
Ga0181522_104062281	3300014657	Bog	MAATQLELIETRRSELQAAFAAFGCVSEQLSGAFD
Ga0187879_107519921	3300017946	Peatland	MTASTLERSGDTRADLQAAFLAFGSVSEQLSGAFDAL
Ga0187847_107641491	3300017948	Peatland	MAATSQEIAQGLVDNSRNELKAAFRAFGSVSEQLSGAFDALRSQVAQLRLELGEAHAGRDSLAARL
Ga0187847_108024932	3300017948	Peatland	MQTTELESMHSSRAELQAAFLAFGSVSEQLSGAFDALRDEVAQLRALLDE
Ga0187886_13449221	3300018018	Peatland	MAANPLDLIDTQRSELTAAFRAFGSVSEQLSGAFDALRAQVAQLRLELGEAHAGNEHLAGRLS
Ga0187864_101891911	3300018022	Peatland	MTASTLERAGDTHADLQAAFLAFGSASEQLSEAFDALRAQVAQLRAELSEARAGKEHLAA
Ga0187857_100172736	3300018026	Peatland	MQTTELESMHSSRAELQAAFLAFGSVSEQLSGAFDALRDEVAQLRAQLDEAHAGKEHL
Ga0187887_103530472	3300018043	Peatland	MQTSELDSIHCSRTQLHAAFVAFGSVSEHLSEAFDSLRAEVAQLRAQLGEAQAGNEHLAA
Ga0182031_11408761	3300019787	Bog	MAATNPLELIENRRTELKSAFLAFGSVSEQLSGAFEALRTQVHPSR
Ga0193755_11601571	3300020004	Soil	MAATKLELIETRRSELQAAFHAFGSVSGHLSDAFDSLR
Ga0193726_10114466	3300020021	Soil	MAATQLDLIENRRSELHAAFLAFGSVSEQLSGAFDSLRSQVAQLRADLGEAHAGRDHLA
Ga0179592_104086822	3300020199	Vadose Zone Soil	MAATQLELIENRRSELQAAFLAFGSVSEQLSGAFDSLRAEVSRL
Ga0210407_111184282	3300020579	Soil	MAAQMEMLEDRRAELRAAFQAFGSVSEQLSGAFDSLRAEVARLRL
Ga0210403_100435791	3300020580	Soil	MEMLEDRRAELRAAFQAFGSVSEQLSGAFDSLRAEVARLRSQLQEAQAGSADLAARL
Ga0210403_104024392	3300020580	Soil	MAATNLELIENRRSELHAAFLAFGSVSEQLSGAFDSLRSQVA
Ga0210399_107822192	3300020581	Soil	MAATHLELIENRRSELQAAFLAFGSVSEQLSGVFDSLRTQVAQLRAELEEA
Ga0210399_114906311	3300020581	Soil	MAATKLELIENRRSELQAAFLAFGSASEQLSGAFDSLRAEVAELRAELGRAHAGKES
Ga0210401_102506881	3300020583	Soil	MEMLEDRRAELRAAFQAFGSVSEQLSGAFDSLRAEVARLRSQLQEAQAGSADLAARLAAL
Ga0210401_115644871	3300020583	Soil	MAATPLDLIDNQRSELQAAFRAFGSVSEQLAGAYDALRTQVAQLHIE
Ga0210404_102486521	3300021088	Soil	MAATHLELIENRRSELQAAFLAFGSVSEQLSGAFD
Ga0210406_103982091	3300021168	Soil	MAATKLELIENRRSELQAAFLAFGSVSDQLSGAFDSLRGEVAQLRADLTEAHAGKEHLAA
Ga0210406_104136902	3300021168	Soil	MAATNLELIENRRSELQAAFLAFGSVSEQLSGAFDSLRGQVAQLRAEL
Ga0210405_105719322	3300021171	Soil	MAATKFELIENRRSELQAAFRAFGSVSEQLSGAFESLRSQVAQLQSELGEARAGR
Ga0210408_102243951	3300021178	Soil	MAATHLELIENRRSELQAAFLAFGSVSEQLSGAFDSLRTQVAQLRAELGEAHAGKEHLAARLSALIK
Ga0210388_103469072	3300021181	Soil	MAANPLDLIDSQRSELTAAFRAFGSVSEQLSGAFDALRAQVAELRHE
Ga0210388_107394051	3300021181	Soil	MEMLEDRRAELRAAFQAFGSVSEQLSGAFDSLRAEVARLR
Ga0210393_115349041	3300021401	Soil	MAATKLELIENRRSELQAAFLAFGSVSDQLSGAFDSLRGEVAQLRADLSEAHAGKE
Ga0210385_104206682	3300021402	Soil	MAANPLDLIDSQRSELTAAFRAFGSVSEQLSGAFD
Ga0210397_116328502	3300021403	Soil	MAAQMEMLEDRRAELRAAFQAFGSVSEQLSGAFDSLRA
Ga0210386_115954912	3300021406	Soil	MAANPLDLIDSQRSELTAAFRAFGSVSEQLSGAFDALRAQVAELRHELGEAHAGNEHLAARLSALIEGLPG
Ga0210383_110500662	3300021407	Soil	MAATKLELIENRRSELQAAFLTFGTVSDQLTDAFDSLRGELAQLRTDLSAAHAGKEHLAARLSALI
Ga0210383_112139032	3300021407	Soil	MAATKFELIENRRSELQAAFRAFGSVSEQLSGAFESLRSQVAQLQSELG
Ga0210383_117801712	3300021407	Soil	MAATNLELIENRRSELQAAFLAFGSVSEQLSGAFESLRTQVA
Ga0210394_118299971	3300021420	Soil	MAATKLELIENRRSELQAAFLAFGSVSEQLSDAFDSL
Ga0210391_115547152	3300021433	Soil	MAATPLDLIDNQRSELQAAFRAFGSVSEQLAGAYDALRAQVAQLHIEL
Ga0210390_106424222	3300021474	Soil	MAATKLELIENRRTELQAAFLAFGSVSEQLSGAFDSLRSQVAQL
Ga0210390_108930712	3300021474	Soil	MAATNLDLIENRRSELQAAFLAFGSVSEQLSGHFESLRAQVA
Ga0210392_106207462	3300021475	Soil	MAAIKLELIENRRSELQAAFLAFGSVSDQLSGAFDSLRGEVAQLRADLIE
Ga0210398_109273172	3300021477	Soil	MAANPLDLIDSQRSELTAAFRAFGSVSEQLSGAFDALRAQVAELR
Ga0210398_110903722	3300021477	Soil	MAAQMEMLEDRRAELRAAFQAFGSVSEQLSGAFDSLRAEVARLRLQLQE
Ga0210402_100682455	3300021478	Soil	LLSSSGMAATNLELIENRRSELQAAFLAFGSVSEQLSGAFDSLRAQVAEPRAELG
Ga0210410_102304562	3300021479	Soil	MAAQVEMIDDRRSELHAAFLAFGSVSEQLSGAFDSLRGEVAELRVQLREAHAGNAHLAERLAALVKGIPGGVLL
Ga0210410_116655752	3300021479	Soil	MAAQMEMLEDRRAELRAAFQAFGSVSEQLSGAFDSLRAEVARLRSQ
Ga0242653_11061201	3300022712	Soil	MAATKLELIENRRTELQAAFLAFGSVSEQLSGAFDSLRTQVAQLRAEL
Ga0242654_101191481	3300022726	Soil	MEMLEDRRAELRAAFQAFGSVSEQLSGAFDSLRAEVARLRLQLQEAQAGSADLA
Ga0224570_1081551	3300022730	Rhizosphere	MAATKLELIENRRSELQAAFLAFGSVSDQLSGAFDSLRGEVA
Ga0247661_10894552	3300024254	Soil	MAATNLELIENRRSELQAAFLAFGSVSEQLSGAFDSLRTQVAQLRAELG
Ga0224556_10876672	3300024295	Soil	VRAQKLLSYERMAATSLDLIDNQRSELKAAFRAFGSISEQLAGAYEALRAQVAELHIELGEARAGKEHLAARLSAVIEGLP
Ga0137417_10482742	3300024330	Vadose Zone Soil	MAATQLELIENRRSELQAAFLAFGSVSEQLSGAFDSLRAEVAELRAELGEAHAGKE
Ga0208480_10214072	3300025633	Arctic Peat Soil	MAATKLELIENRRSELQAAFLAFGSVSDQLSGAFDSLRGEVAQLRADLS
Ga0207667_119280311	3300025949	Corn Rhizosphere	MAASPLELIENRRSELQSAFLAFGAVSEQLSGAFDSLRAQVAQLRAELGEARAGKEHLAARLSALIAGLP
Ga0209839_101781022	3300026294	Soil	MAATQLDLIENRRSELQAAFLAFGSVSEQLSGAFDSLRSQVAQTSVSVTPR
Ga0209240_12395252	3300026304	Grasslands Soil	MAATQLELIENRRSELQAAFLAFGSVSEQLSGAFDALRAQVADLRAELSEARAGKEHLAARLSALIKG
Ga0179587_101117452	3300026557	Vadose Zone Soil	MAATKLEPIENRRSELQAAFLAFGTVSDQLSDAFDSLRGEVAQLRTDLSAAHAG
Ga0208236_10052981	3300027066	Forest Soil	MAANPLDMADTQRSELTAAFRAFGSVSEQLSGAFDALRAQVTQLRQSLSEAHAGNEHLAARLSALIEGLPGGVI
Ga0208992_10043521	3300027176	Forest Soil	MAATKLELIENRRSELQAAFLAFGSVSEQLSGAFDSLR
Ga0209327_10633101	3300027307	Forest Soil	MAATKLELIENRRSELHAAFLAFGSVSDQLSGAFESLSAEVARLRAD
Ga0208987_10508791	3300027496	Forest Soil	MAATKLELIENRRSELQAAFLAFGSVSEQLSGAFDALRAQVADLRAELSEARAGKEH
Ga0209008_10179911	3300027545	Forest Soil	MAATKLELIENRRSELQAAFLAFGSVSDQLSGAFDSLRAELAQLRADLSEAHAGK
Ga0209331_11406721	3300027603	Forest Soil	MAATQLELIENRRSELQAAFLAFGSVSEQLSGAFDSLRAEVAQLRAQ
Ga0209221_11617771	3300027609	Forest Soil	MAATNLDLIENRRSELQAAFLAFGSVSEQLSGHFESLRAQVAQLRAELGEAHAGKEHLAA
Ga0209528_11430982	3300027610	Forest Soil	MAATNLELIENRRSELQAAFLAFGSVSEQLSGAFDSLRGQVAKLRADLGEAHAV
Ga0209905_10138591	3300027634	Thawing Permafrost	MSATTLESLDTKRHELQAAFLAFGSVSEQLSGAFDALRDQVAQLREELHEANAGKEHLAARLS
Ga0209007_11854342	3300027652	Forest Soil	LLSSSGMAATKLELIENRRTELQAAFLAFGSVSEQLSGAFDS
Ga0209736_11652332	3300027660	Forest Soil	METIDEGRADLHAAFLAFGSVSEQLSGAFDSLRGEVTRLRLQLQESEAGSADL
Ga0209328_102675142	3300027727	Forest Soil	MAATKLELIENRRSELQAAFLAFGSVSEQLSGAFDSLRAEVARLRAELGEAHAGKEHL
Ga0209772_100137223	3300027768	Bog Forest Soil	MAATNLELIENRRSELQAAFLAFGSVSEQLSGAFDSLRSQVAELQSDLRDARAGREHLAARLSALV
Ga0209112_103828841	3300027817	Forest Soil	MAATKLELIENRRSELQAAFLAFGSVSDQLSGAFESLSAEVA
Ga0209579_104811182	3300027869	Surface Soil	MAATSQELTQGLADNSRSELTAAFRAFGSVSEQLSGAFDALRGQVAQLRHELNEAHAGRDSLAARLSALIEGL
Ga0209275_104242031	3300027884	Soil	MEMLEDRRAELRAAFQAFGSVSEQLSGAFDSLRAEVARLRLQLQEAQAGSADL
Ga0209624_111251071	3300027895	Forest Soil	MAATNLDLIENRRSELQAAFLAFGSVSEQLSGHFESLRAQVAQLRAEL
Ga0209006_107294831	3300027908	Forest Soil	MEMIDDGRADLHAAFLAFGVGAEQLSGAFDSLRGEVTRLRLQLQESEAGSADLAARLA
Ga0209006_115255811	3300027908	Forest Soil	MAATSQELIDNSRSELKAAFHAFGSVSEQLSGAFDALRGQVAQLRH
Ga0265355_10074251	3300028036	Rhizosphere	MAATKLELIENRRSELQAAFLAFGSVSDQLSGAFDSLRGELAQLRA
Ga0302220_101637971	3300028742	Palsa	MAATNLDLIENRRSELQAAFLAFGSVSEQLSGHFESLRAQVAQLRTELGEAHAGKEHLAG
Ga0302202_104355031	3300028762	Bog	MAANPQDLVDTQRSELTAAFRAFGSVSEQLSGAFDALRAQVAQLRSE
Ga0302231_102683931	3300028775	Palsa	MAATTLESIDNQRSELQAAFRAFGAVSEQLSGAFDALRGQVAQLRRELGEAQAGKQHLAARLSAL
Ga0302227_102769452	3300028795	Palsa	MAATKLELIENRRSELQAAFLAFGSVSDQLSGAFDSLRGEVAQLRADLTEAHA
Ga0302235_100933802	3300028877	Palsa	MRAQKLLSSERMAATSLDLIDNQRSELQAAFRAFGSVSEQLAGAYEALRAQVAELHIELGEARAGKEHLAARLSAV
Ga0302229_103968272	3300028879	Palsa	MAATKLELIENRRSELQAAFLAFGSVSDQLSGAFDS
Ga0308309_101786171	3300028906	Soil	MAATKLELIENRRSELQAAFLAFGSVSDQLSGAFDSLRGEVAQLRADLSEAHA
Ga0308309_108712741	3300028906	Soil	MAATSQEITQGLVDNSRSELTAAFRAFGSVSEQLSGAFDALRGQVAQLRHELNE
Ga0311368_101778841	3300029882	Palsa	MAATSLEVIDNQRTELQAAFLAFGSVSEQLAGAYEALRGQVAQLHIELGEAR
Ga0311329_107441442	3300029907	Bog	MQTTQYDQVEDGRAELRAAFVAFGSVSEQLSGTFDCLSGEVAKLRLELAEARAGNENLAARLSALLQA
Ga0311329_108029881	3300029907	Bog	MAATKLELIENRRSELQAAFVAFGSVSEQLSSAFDSLKTEVAELRAELGEAHAGKQHLAARLAALITG
Ga0311369_102419801	3300029910	Palsa	MAATPLDVIDNQRSELQAAFRAFGSVSEQLAGAYEALRGQVAQLHIELAEARAGK
Ga0311361_102164713	3300029911	Bog	MAATKLELIENRRSELQAAFVAFGSVSEQLSSAFDSLKTEVAELRAELGEAHAGKQHLAARLAALIT
Ga0311363_112005501	3300029922	Fen	MAANKLELIENRRADLQAAFHAFGSVSEQLSGAFDSL
Ga0311363_116217102	3300029922	Fen	MAATKLELIENRRSELQAAFLAFGSVSDQLSGAFDSLRSQVAQLRVELGEAH
Ga0311330_102290531	3300029945	Bog	LLSSSGMAATKLELIENRRSELQVAFVAFGSVSEQLS
Ga0311338_108084912	3300030007	Palsa	MAATKLELIENRRSELQAAFLAFGSVSEQLSGAFDSLRTQVAQLR
Ga0302178_100864702	3300030013	Palsa	MAATSQEIAQGLVDNSRNELKAAFRAFGSVSEQLSGAFDALRSQVAQLRLELSEA
Ga0311353_102162302	3300030399	Palsa	MAATSLEVIDNQRTELQAAFLAFGSVSEQLAGAYEALRGQVAQLHIEL
Ga0311370_120948432	3300030503	Palsa	MAANKLELIENRRAELQAAFHAFGSVSEQLSGAFDSLRAQVAQLR
Ga0311372_116143531	3300030520	Palsa	MAATPLDVIDNQRSELQAAFRAFGSVSEQLAGAYEAL
Ga0311355_106846871	3300030580	Palsa	MNGTSVESPVSAHAELQAAFLAFGSVSEQLSGAFDALRGQVAQLRGELT
Ga0311356_104059321	3300030617	Palsa	MAATKLTLIENSRSELQAAFLAFGSVSEQLSGAFESLRGQVA
Ga0311354_108562761	3300030618	Palsa	MAATKLELIENRRSELQAAFLAFGSVSEQLSGAFDSLRTQVAQLRAELGEAHAGKEHLAA
Ga0311354_112976442	3300030618	Palsa	MAATKLTLIENSRSELQAAFLAFGSVSEQLSGAFESLRGQVAQLRTELGEARAGKEHLA
Ga0302313_100804491	3300030693	Palsa	MAATSLEVIDNQRTELQAAFLAFGSVSEQLAGAYEALRGQVAQLHIELGEARAGKEHLASRLSALI
Ga0302313_101960772	3300030693	Palsa	MAATKLELIENRRSELQAAFLAFGSVSDQLSGAFDSLRGEVAQLRADLTEAHAGKEHLAARLS
Ga0302311_102575461	3300030739	Palsa	MAATKLDLIEDRRSELQAAFLAFGSVSEQLSGAFDS
Ga0311335_113673271	3300030838	Fen	LLSSYGMAANPLESINPRRSELQEAFLAFGSVSQQLSGAFESLQAEVGRLRIELGEARAG
Ga0265723_10309082	3300030872	Soil	MAATKLELIENRRTELPAAFLAFGSVSDQLSGAFDSLRDEVARLRADLSEA
Ga0075386_117653401	3300030916	Soil	MAATKLALIENRRSELQAAFLAFGSVSDQLSGAFDALRGEVVQLRAALVEAHAGKEHLAARLSALIKGLPGG
Ga0170834_1001883431	3300031057	Forest Soil	MAATKLELIENRRSELQAAFLAFGSVSDQLSGAFD
Ga0265760_101018691	3300031090	Soil	MAATNLELIENRRSELQAAFLAFGSVSEQLSGAFDSLRTQVAQL
Ga0170823_152302341	3300031128	Forest Soil	MAANNLQLIENRRSELQAAFLAFGSVSEQLSGAFDSLRTQVAQLRVELGEA
Ga0302323_1022744471	3300031232	Fen	LLSSYGLAANPLESINPRRSELQEAFLAFGSVSQQLSGAFESLQAEVG
Ga0302325_133091772	3300031234	Palsa	MTATQPPLSDTRRTELQAAFTAFGTVSEQLSCAFDS
Ga0302140_109502431	3300031261	Bog	MAASSLELIDTQRTELQAAFRAFGSVSEQLSSAFDALRRQVAQLRAELGEAHAGKEHLA
Ga0302326_110389841	3300031525	Palsa	MAATSQEIAQGLVDNSRNELKAAFRAFGSVSEQLSGAFDALRCQVAQLRLELSEAHAGRDSLAARLSAL
Ga0302326_118713862	3300031525	Palsa	MAATSQEIAQGLVDNSRNELKAAFRAFGSVSEQLSGAFD
Ga0302326_132958022	3300031525	Palsa	MAATKLELIENRRSELQAAFLAFGSVSEQLTDAFDSLRGQVAQLRADLSDAHAGKEHLAARLSALVKGLPG
Ga0310686_1081521181	3300031708	Soil	MAANKLELIENRRAELQAAFHAFGSVSEQLSGAFDSLREQVAQLRTELGEAHAGKEHLAA
Ga0310686_1119016512	3300031708	Soil	MAATPLDVIDNQRSELQAAFRAFGSVSEQLAGAYEALRGQVAQLHIELGEARAG
Ga0310686_1177781151	3300031708	Soil	KYRRGTEVAFFSGMAATKLDLIENRRSELQAAFLAFGSVSEQLSGAFDSLRAQVAQLRA
Ga0265342_104523742	3300031712	Rhizosphere	MAATKLELIENRRSELQAAFLAFGSVSEQLSGAFDSLRTQVAQ
Ga0307476_101277752	3300031715	Hardwood Forest Soil	MAATKLELIENRRSELHAAFLAFGSVSDQLSGAFDSLRGEVAQLRADLSEAHAGKEHLAARLS
Ga0307476_101466571	3300031715	Hardwood Forest Soil	LLSSSGMAATHLELIENRRTELQAAFLAFGSVSEQLSGAFDSLRTEVAQLRTELG
Ga0307476_101798452	3300031715	Hardwood Forest Soil	MAATNLELIENRRSELHAAFLAFGSVSEQLSGAFDSLRTQVAQLRAELQEAHANKEHLASRL
Ga0307476_110877331	3300031715	Hardwood Forest Soil	MAAQMETLEDRRAELRAAFQAFGSVSEQLSGAFDSLRAEVGRLRLQL
Ga0307474_103502062	3300031718	Hardwood Forest Soil	MAATNLELIENRRSELHAAFLAFGSVSEQLSGAFDS
Ga0307475_105814281	3300031754	Hardwood Forest Soil	MAATKLELIENRRSELQAAFLAFGSVSEQLSGAFDLLRAEVAELRAELGRA
Ga0302322_1010319101	3300031902	Fen	LLSSYGMAANPLESINPRRSELQEAFLAFGSVSQQLSGAFESLQAEVGRLRIELGEARAGNEH
Ga0334847_032104_2_148	3300033826	Soil	MAATKPELIENRRSELQAAFLAFGSVSEQLSGAFDSLRAQVAQLRSELG
Ga0334790_153614_531_689	3300033887	Soil	MQITELEPMQSSRAELQAAFLAFGSVSEQLSDAFDALRDEVAQLRAQLDEVHA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F037311

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences