Metagenome / Metatranscriptome Family F037386

Basic Information
Family ID	F037386
Family Type	Metagenome / Metatranscriptome
Number of Sequences	168
Average Sequence Length	46 residues
Representative Sequence	LLRHRGVALPPRHIIRPDLDAAAEGQRLGAFLAGYDLPVEEQRRWRV
Number of Associated Samples	143
Number of Associated Scaffolds	168

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	98.81 %
% of genes from short scaffolds (< 2000 bps)	89.88 %
Associated GOLD sequencing projects	136
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Most Common Taxonomy
Group	Bacteria (57.738 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (27.381 % of family members)
Environment Ontology (ENVO)	Unclassified (28.571 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (37.500 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 28.00% β-sheet: 0.00% Coil/Unstructured: 72.00%
Feature Viewer

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Pfam ID	Name	% Frequency in 168 Family Scaffolds
PF00248	Aldo_ket_red	49.40
PF02776	TPP_enzyme_N	9.52
PF02775	TPP_enzyme_C	5.95
PF07690	MFS_1	2.38
PF00563	EAL	1.79
PF00149	Metallophos	1.19
PF03795	YCII	1.19
PF13426	PAS_9	1.19
PF00293	NUDIX	1.19
PF08281	Sigma70_r4_2	1.19
PF07715	Plug	1.19
PF00801	PKD	1.19
PF00990	GGDEF	1.19
PF04542	Sigma70_r2	0.60
PF01522	Polysacc_deac_1	0.60
PF05899	Cupin_3	0.60
PF00270	DEAD	0.60
PF09900	DUF2127	0.60
PF01431	Peptidase_M13	0.60
PF01850	PIN	0.60
PF10091	Glycoamylase	0.60
PF00324	AA_permease	0.60
PF02321	OEP	0.60
PF13533	Biotin_lipoyl_2	0.60
PF02518	HATPase_c	0.60
PF09351	DUF1993	0.60
PF03466	LysR_substrate	0.60
PF00106	adh_short	0.60
PF00199	Catalase	0.60
PF03129	HGTP_anticodon	0.60

COG ID	Name	Functional Category	% Frequency in 168 Family Scaffolds
COG2200	EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant)	Signal transduction mechanisms [T]	1.79
COG3434	c-di-GMP phosphodiesterase YuxH/PdeH, contains EAL and HDOD domains	Signal transduction mechanisms [T]	1.79
COG4943	Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domains	Signal transduction mechanisms [T]	1.79
COG5001	Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain	Signal transduction mechanisms [T]	1.79
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	1.19
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.19
COG0124	Histidyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.60
COG0423	Glycyl-tRNA synthetase, class II	Translation, ribosomal structure and biogenesis [J]	0.60
COG0441	Threonyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.60
COG0442	Prolyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.60
COG0531	Serine transporter YbeC, amino acid:H+ symporter family	Amino acid transport and metabolism [E]	0.60
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.60
COG0726	Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family	Cell wall/membrane/envelope biogenesis [M]	0.60
COG0753	Catalase	Inorganic ion transport and metabolism [P]	0.60
COG0833	Amino acid permease	Amino acid transport and metabolism [E]	0.60
COG1113	L-asparagine transporter or related permease	Amino acid transport and metabolism [E]	0.60
COG1115	Na+/alanine symporter	Amino acid transport and metabolism [E]	0.60
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.60
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.60
COG3590	Predicted metalloendopeptidase	Posttranslational modification, protein turnover, chaperones [O]	0.60
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.60

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	57.74 %
Unclassified	root	N/A	42.26 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	57.74 %
Unclassified	root	N/A	42.26 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	57.74 %
Unclassified	root	N/A	42.26 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.26 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	28.57 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.19 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.26 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	10.71 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	10.71 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.60 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.26 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.98 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	2.38 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.60 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.26 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2.38 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	1.19 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.60 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.26 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2.38 %
unclassified Rhizobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → unclassified Rhizobiaceae	0.60 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	0.60 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.26 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2.38 %
Rhizobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → unclassified Rhizobiaceae → Rhizobiaceae bacterium	0.60 %
Curtobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Curtobacterium	0.60 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.26 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2.38 %
unclassified Curtobacterium	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Curtobacterium → unclassified Curtobacterium	0.60 %
Rhizobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → unclassified Rhizobiaceae → Rhizobiaceae bacterium	0.60 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.26 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2.38 %
Curtobacterium sp. ER1/6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Curtobacterium → unclassified Curtobacterium → Curtobacterium sp. ER1/6	0.60 %
Rhizobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → unclassified Rhizobiaceae → Rhizobiaceae bacterium	0.60 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.60 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002909\|JGI25388J43891_1041103	Not Available	712	Open in IMG/M
3300002911\|JGI25390J43892_10012462	All Organisms → cellular organisms → Bacteria → Proteobacteria	1996	Open in IMG/M
3300002915\|JGI25387J43893_1004519	Not Available	1808	Open in IMG/M
3300004091\|Ga0062387_100410061	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	916	Open in IMG/M
3300005332\|Ga0066388_106463325	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300005334\|Ga0068869_100304589	All Organisms → cellular organisms → Bacteria	1288	Open in IMG/M
3300005363\|Ga0008090_10010685	Not Available	853	Open in IMG/M
3300005439\|Ga0070711_101118723	All Organisms → cellular organisms → Bacteria → Proteobacteria	679	Open in IMG/M
3300005444\|Ga0070694_100272910	All Organisms → cellular organisms → Bacteria	1287	Open in IMG/M
3300005454\|Ga0066687_10164638	Not Available	1184	Open in IMG/M
3300005459\|Ga0068867_100280246	All Organisms → cellular organisms → Bacteria	1367	Open in IMG/M
3300005468\|Ga0070707_102243516	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	513	Open in IMG/M
3300005541\|Ga0070733_11073434	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300005542\|Ga0070732_10288421	All Organisms → cellular organisms → Bacteria	985	Open in IMG/M
3300005542\|Ga0070732_10695237	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	619	Open in IMG/M
3300005556\|Ga0066707_10331901	Not Available	995	Open in IMG/M
3300005564\|Ga0070664_100967177	All Organisms → cellular organisms → Bacteria → Proteobacteria	800	Open in IMG/M
3300005569\|Ga0066705_10655534	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300006032\|Ga0066696_10073099	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1992	Open in IMG/M
3300006041\|Ga0075023_100158440	Not Available	841	Open in IMG/M
3300006041\|Ga0075023_100369115	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	612	Open in IMG/M
3300006173\|Ga0070716_100017564	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3711	Open in IMG/M
3300006173\|Ga0070716_101254662	All Organisms → cellular organisms → Bacteria → Proteobacteria	597	Open in IMG/M
3300006173\|Ga0070716_101331043	Not Available	582	Open in IMG/M
3300006755\|Ga0079222_11445584	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300006804\|Ga0079221_10842022	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300006954\|Ga0079219_11695841	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300009029\|Ga0066793_10548010	All Organisms → cellular organisms → Bacteria	660	Open in IMG/M
3300009038\|Ga0099829_11199795	Not Available	628	Open in IMG/M
3300009098\|Ga0105245_10030873	Not Available	4739	Open in IMG/M
3300010159\|Ga0099796_10586488	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	502	Open in IMG/M
3300010321\|Ga0134067_10111860	Not Available	944	Open in IMG/M
3300010326\|Ga0134065_10459874	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300010333\|Ga0134080_10615306	Not Available	530	Open in IMG/M
3300010360\|Ga0126372_12241807	Not Available	596	Open in IMG/M
3300010366\|Ga0126379_11627769	Not Available	751	Open in IMG/M
3300010366\|Ga0126379_12078270	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300010373\|Ga0134128_10752415	Not Available	1081	Open in IMG/M
3300010375\|Ga0105239_12348664	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	621	Open in IMG/M
3300010376\|Ga0126381_100664604	Not Available	1488	Open in IMG/M
3300010376\|Ga0126381_104418497	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300010398\|Ga0126383_11120571	Not Available	876	Open in IMG/M
3300011120\|Ga0150983_14864280	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	555	Open in IMG/M
3300011270\|Ga0137391_10373863	Not Available	1222	Open in IMG/M
3300012096\|Ga0137389_10104514	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2257	Open in IMG/M
3300012202\|Ga0137363_10218221	All Organisms → cellular organisms → Bacteria	1538	Open in IMG/M
3300012202\|Ga0137363_11303593	Not Available	615	Open in IMG/M
3300012210\|Ga0137378_11199347	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300012903\|Ga0157289_10177501	Not Available	678	Open in IMG/M
3300012918\|Ga0137396_10377524	Not Available	1050	Open in IMG/M
3300012927\|Ga0137416_11859902	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	551	Open in IMG/M
3300012929\|Ga0137404_10128045	All Organisms → cellular organisms → Bacteria → Proteobacteria	2085	Open in IMG/M
3300012944\|Ga0137410_10526596	Not Available	969	Open in IMG/M
3300012986\|Ga0164304_11107578	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300012988\|Ga0164306_10335999	Not Available	1114	Open in IMG/M
3300013306\|Ga0163162_10686995	All Organisms → cellular organisms → Bacteria	1146	Open in IMG/M
3300014325\|Ga0163163_11152371	All Organisms → cellular organisms → Bacteria	838	Open in IMG/M
3300014495\|Ga0182015_10090872	All Organisms → cellular organisms → Bacteria	2131	Open in IMG/M
3300014968\|Ga0157379_10631084	Not Available	1002	Open in IMG/M
3300015054\|Ga0137420_1077061	Not Available	523	Open in IMG/M
3300015054\|Ga0137420_1381449	All Organisms → cellular organisms → Bacteria → Proteobacteria	2471	Open in IMG/M
3300015245\|Ga0137409_10066193	All Organisms → cellular organisms → Bacteria	3390	Open in IMG/M
3300015245\|Ga0137409_10562135	Not Available	968	Open in IMG/M
3300015374\|Ga0132255_100385127	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2038	Open in IMG/M
3300016294\|Ga0182041_10463369	Not Available	1091	Open in IMG/M
3300016341\|Ga0182035_10629007	All Organisms → cellular organisms → Bacteria	930	Open in IMG/M
3300016357\|Ga0182032_10726562	Not Available	835	Open in IMG/M
3300016371\|Ga0182034_10335028	Not Available	1224	Open in IMG/M
3300016387\|Ga0182040_10362622	Not Available	1127	Open in IMG/M
3300017937\|Ga0187809_10016949	All Organisms → cellular organisms → Bacteria → Proteobacteria	2346	Open in IMG/M
3300017972\|Ga0187781_11211789	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300018058\|Ga0187766_10141602	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1487	Open in IMG/M
3300018482\|Ga0066669_10137876	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1771	Open in IMG/M
3300019789\|Ga0137408_1182236	Not Available	644	Open in IMG/M
3300020150\|Ga0187768_1027129	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → unclassified Rhizobiaceae → Rhizobiaceae bacterium	1239	Open in IMG/M
3300020581\|Ga0210399_10638218	Not Available	879	Open in IMG/M
3300021180\|Ga0210396_10794398	Not Available	812	Open in IMG/M
3300021362\|Ga0213882_10238112	Not Available	754	Open in IMG/M
3300021406\|Ga0210386_10453139	Not Available	1108	Open in IMG/M
3300021420\|Ga0210394_11332995	Not Available	612	Open in IMG/M
3300021559\|Ga0210409_10235961	All Organisms → cellular organisms → Bacteria	1658	Open in IMG/M
3300021560\|Ga0126371_11295894	Not Available	862	Open in IMG/M
3300021560\|Ga0126371_11503331	Not Available	802	Open in IMG/M
3300024182\|Ga0247669_1043305	All Organisms → cellular organisms → Bacteria	751	Open in IMG/M
3300025898\|Ga0207692_10259322	Not Available	1044	Open in IMG/M
3300025906\|Ga0207699_10230084	All Organisms → cellular organisms → Bacteria	1269	Open in IMG/M
3300025909\|Ga0207705_11525219	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	505	Open in IMG/M
3300025922\|Ga0207646_11861697	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	513	Open in IMG/M
3300025934\|Ga0207686_10435900	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Curtobacterium → unclassified Curtobacterium → Curtobacterium sp. ER1/6	1005	Open in IMG/M
3300025942\|Ga0207689_10294159	All Organisms → cellular organisms → Bacteria	1345	Open in IMG/M
3300025949\|Ga0207667_11459368	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300026041\|Ga0207639_10544361	All Organisms → cellular organisms → Bacteria → Proteobacteria	1065	Open in IMG/M
3300026088\|Ga0207641_11502047	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300026318\|Ga0209471_1203922	Not Available	749	Open in IMG/M
3300026333\|Ga0209158_1218181	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300026530\|Ga0209807_1316319	Not Available	530	Open in IMG/M
3300027635\|Ga0209625_1065126	Not Available	815	Open in IMG/M
3300027795\|Ga0209139_10178530	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	751	Open in IMG/M
3300027821\|Ga0209811_10427862	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300027824\|Ga0209040_10445935	Not Available	590	Open in IMG/M
3300027842\|Ga0209580_10219441	All Organisms → cellular organisms → Bacteria	944	Open in IMG/M
3300027867\|Ga0209167_10125511	All Organisms → cellular organisms → Bacteria → Proteobacteria	1331	Open in IMG/M
3300027903\|Ga0209488_10890341	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	625	Open in IMG/M
3300028808\|Ga0302228_10114346	Not Available	1258	Open in IMG/M
3300029984\|Ga0311332_11029486	Not Available	661	Open in IMG/M
3300029992\|Ga0302276_10373394	Not Available	596	Open in IMG/M
3300030737\|Ga0302310_10021008	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4479	Open in IMG/M
3300031057\|Ga0170834_107381350	All Organisms → cellular organisms → Bacteria → Proteobacteria	2460	Open in IMG/M
3300031231\|Ga0170824_101488816	Not Available	1211	Open in IMG/M
3300031231\|Ga0170824_101748683	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	551	Open in IMG/M
3300031231\|Ga0170824_103553941	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	629	Open in IMG/M
3300031231\|Ga0170824_127704116	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1960	Open in IMG/M
3300031231\|Ga0170824_128942928	All Organisms → cellular organisms → Bacteria	1283	Open in IMG/M
3300031233\|Ga0302307_10211420	Not Available	1000	Open in IMG/M
3300031258\|Ga0302318_10407501	Not Available	686	Open in IMG/M
3300031561\|Ga0318528_10072355	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1776	Open in IMG/M
3300031561\|Ga0318528_10605026	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300031640\|Ga0318555_10092630	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1585	Open in IMG/M
3300031680\|Ga0318574_10772633	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300031712\|Ga0265342_10474990	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300031719\|Ga0306917_10532165	Not Available	923	Open in IMG/M
3300031719\|Ga0306917_11045974	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300031723\|Ga0318493_10050552	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1965	Open in IMG/M
3300031736\|Ga0318501_10084113	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1560	Open in IMG/M
3300031740\|Ga0307468_100103750	Not Available	1699	Open in IMG/M
3300031748\|Ga0318492_10250476	Not Available	915	Open in IMG/M
3300031751\|Ga0318494_10245516	Not Available	1026	Open in IMG/M
3300031754\|Ga0307475_10026463	All Organisms → cellular organisms → Bacteria → Proteobacteria	4152	Open in IMG/M
3300031754\|Ga0307475_11115468	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	617	Open in IMG/M
3300031754\|Ga0307475_11504988	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	516	Open in IMG/M
3300031764\|Ga0318535_10208805	Not Available	873	Open in IMG/M
3300031765\|Ga0318554_10075215	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1877	Open in IMG/M
3300031765\|Ga0318554_10284930	Not Available	940	Open in IMG/M
3300031768\|Ga0318509_10029656	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2655	Open in IMG/M
3300031770\|Ga0318521_10989517	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300031771\|Ga0318546_11331031	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300031777\|Ga0318543_10409745	All Organisms → cellular organisms → Bacteria	607	Open in IMG/M
3300031778\|Ga0318498_10254327	Not Available	792	Open in IMG/M
3300031779\|Ga0318566_10082554	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	1563	Open in IMG/M
3300031781\|Ga0318547_10254134	Not Available	1060	Open in IMG/M
3300031781\|Ga0318547_10505699	Not Available	746	Open in IMG/M
3300031792\|Ga0318529_10551538	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300031793\|Ga0318548_10299866	Not Available	789	Open in IMG/M
3300031793\|Ga0318548_10305521	Not Available	781	Open in IMG/M
3300031797\|Ga0318550_10280577	Not Available	808	Open in IMG/M
3300031799\|Ga0318565_10148524	Not Available	1136	Open in IMG/M
3300031823\|Ga0307478_10344040	All Organisms → cellular organisms → Bacteria	1228	Open in IMG/M
3300031823\|Ga0307478_11206184	All Organisms → cellular organisms → Bacteria → Proteobacteria	630	Open in IMG/M
3300031833\|Ga0310917_10491904	Not Available	835	Open in IMG/M
3300031845\|Ga0318511_10123013	All Organisms → cellular organisms → Bacteria	1119	Open in IMG/M
3300031893\|Ga0318536_10048220	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2050	Open in IMG/M
3300031893\|Ga0318536_10269454	Not Available	865	Open in IMG/M
3300031896\|Ga0318551_10215565	Not Available	1066	Open in IMG/M
3300031947\|Ga0310909_10046780	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3303	Open in IMG/M
3300032009\|Ga0318563_10042421	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2314	Open in IMG/M
3300032009\|Ga0318563_10268956	Not Available	921	Open in IMG/M
3300032009\|Ga0318563_10469199	Not Available	680	Open in IMG/M
3300032010\|Ga0318569_10215210	Not Available	891	Open in IMG/M
3300032018\|Ga0315272_10155816	Not Available	1076	Open in IMG/M
3300032043\|Ga0318556_10225710	All Organisms → cellular organisms → Bacteria	976	Open in IMG/M
3300032065\|Ga0318513_10494462	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300032076\|Ga0306924_10082089	Not Available	3615	Open in IMG/M
3300032091\|Ga0318577_10365950	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300032094\|Ga0318540_10111660	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1292	Open in IMG/M
3300032180\|Ga0307471_100585857	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1273	Open in IMG/M
3300033289\|Ga0310914_11483373	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300033290\|Ga0318519_10371486	Not Available	848	Open in IMG/M
3300034163\|Ga0370515_0106113	Not Available	1211	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.48%
Host-Associated	Host-Associated	9.52%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	86.31%
Plants	Host-Associated → Plants	9.52%
Aquatic	Environmental → Aquatic	4.17%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	82.14%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.76%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.17%
Peat	Environmental → Terrestrial → Peat	3.57%
Freshwater	Environmental → Aquatic → Freshwater	2.98%
Sediment	Environmental → Aquatic → Sediment	1.19%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.60%
Roots	Host-Associated → Plants → Roots	0.60%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	71.43%
Loam	Environmental → Terrestrial → Soil → Loam	7.14%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.17%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.57%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.57%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.38%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.38%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.79%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.19%
Lake	Environmental → Aquatic → Freshwater → Lake	0.60%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.60%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.60%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.60%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	39.88%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.62%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.55%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.36%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.17%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.57%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.38%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.38%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.79%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.79%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.79%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.19%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.19%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.60%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.60%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.60%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.60%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.60%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.60%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	27.38%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.12%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.36%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.17%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.17%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.57%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.57%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.38%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.79%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.79%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.79%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.79%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.19%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.19%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	1.19%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.19%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.19%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.19%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.60%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.60%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.60%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.60%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.60%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.60%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.60%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.60%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.60%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.60%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.60%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.60%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.60%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.60%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.60%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.60%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.60%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002909	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm	Environmental	Open in IMG/M
3300002911	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm	Environmental	Open in IMG/M
3300002915	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012903	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S134-311R-1	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300020150	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_20_MG	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021362	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R09	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024182	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK10	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300027635	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027795	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028808	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_2	Environmental	Open in IMG/M
3300029984	I_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029992	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_3	Environmental	Open in IMG/M
3300030737	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_2	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031233	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_2	Environmental	Open in IMG/M
3300031258	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_1	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031712	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG	Host-Associated	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032018	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_middle	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25388J43891_10411031	3300002909	Grasslands Soil	AVALPPRHLLRPDMDEAAEGQRLAAFLAGYDLPAEEQRRWRV*
JGI25390J43892_100124623	3300002911	Grasslands Soil	LRHRGVALPPRYLVCPEVDAVAEGQRFAAFLAGYDLPAEEQRRWRV*
JGI25387J43893_10045191	3300002915	Grasslands Soil	ALPPRYLVRPQVDAVAEAQRFAAFLAGYDLPAEEQRRWRV*
Ga0062387_1004100612	3300004091	Bog Forest Soil	RGLAALLRHRGVKLPPRHLIRRDAEAATEGRRFTEFLSGYDLPATEQRRWRV*
Ga0066388_1064633252	3300005332	Tropical Forest Soil	LHWRRLAPLLRHRGVALPPRHIIRPDLDAAVERQRLAAFLTGYDLPVEEQRRWRV*
Ga0068869_1003045892	3300005334	Miscanthus Rhizosphere	HWRRLAPLLRNRGVVPPPRHLIRPDVDTTAQGQRLAAFLAGYDLPESEQRRWRV*
Ga0008090_100106852	3300005363	Tropical Rainforest Soil	GLHWRRLAPLLRHRGVTLPPRHVIRPDLDAGAEGQRLAAFLSSYDLPLEEQRRWRV*
Ga0070711_1011187231	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	APLLRHRGIALPPRHIIRPDVDAAAEGQRLARWLDAYDLPVEEQQRWR*
Ga0070694_1002729102	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	EPGNGLHWRRLAPLLRNRGVVPPPRHLIRPDVDTTAQGQRLAAFLAGYDLPEAEQRRWRV
Ga0066687_101646381	3300005454	Soil	GEGLHWRRLAPLLRHRGVALPPRYLVCPEVDAVAEGQRFAAFLAGYDLPAEEQRRWRV*
Ga0068867_1002802462	3300005459	Miscanthus Rhizosphere	PPPRHLIRPDVDTSDQGQRLAAFLAGYDLPEAEQRRWRV*
Ga0070707_1022435162	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	GLHWRRLAPLLRHRGVALPPRYIVRPDVDAAFEGQRLAALLANYDLPVEEQHRWRV*
Ga0070733_110734342	3300005541	Surface Soil	LLRHRRVALPPRHLIRAEVDAAVEARRLAAFLAGYDLPLEEQRRWRV*
Ga0070732_102884211	3300005542	Surface Soil	APLLRHRGVALPPRHLLRPEAPATAEGQRLANFLTGYDLPAEQQRRWRV*
Ga0070732_106952372	3300005542	Surface Soil	MALPPRYLVRPELDPATEGYRFAAFLAGYDLPMEEQRRWRV*
Ga0066707_103319012	3300005556	Soil	VALPPRHLIRPDVDAAAEAKRLAAFLADYDLPVEEQRRWRV*
Ga0070664_1009671772	3300005564	Corn Rhizosphere	HWRRLAPLLRHRGIALPPRHIIRPDVDAAAEGQRLARWLDAYDLPVEEQQRWR*
Ga0066705_106555341	3300005569	Soil	RHRAVALPPRHLLRPDMDEAAQRQRLAAFLADYDLPAEEQRRWRV*
Ga0066696_100730991	3300006032	Soil	LAPLLRHRGVALPPRYLVCPEVDAVAEGQRFATFLAGYDLPAEEQRRWRV*
Ga0075023_1001584401	3300006041	Watersheds	HWRRLAPLLRHRSVALPPRHIVRGDVDATLEAQRLVALLVSYDLPECERRRWRV*
Ga0075023_1003691152	3300006041	Watersheds	HWRRLAPLLRHRGVALPPRHILRPDVDAALEGQRLAALLGKYDLPVEEQRRWRV*
Ga0070716_1000175644	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	RLARLLQHRGVALPPRHLLRSRADARAEGERLAAFLAGYDLPVEEQRRWRV*
Ga0070716_1012546622	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	PLLRHRGLALPPRHLIRPDVDAASEGQKLAVFLSDYDLPPEEQHRWRV*
Ga0070716_1013310432	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	GLHWRRLAPLLRHRGVALPPRHLIRPDVDAALEGQRLAGFLAGYDLPLEEQRRWRV*
Ga0079222_114455841	3300006755	Agricultural Soil	RPCCDTAASLPPRHIIRPELDATAEGERLTAFLSEYDLPLEERRRWRV*
Ga0079221_108420221	3300006804	Agricultural Soil	GVALPPRHIVRQDGDVALESQRLAAFLANYDLPAEEQRRWRV*
Ga0079219_116958412	3300006954	Agricultural Soil	PRHLIRPEVDAAAEAQRLAAFLTGYDLPVQEQRRWRV*
Ga0066793_105480101	3300009029	Prmafrost Soil	LPPRHLIRPAVDAAIERQQLAAFLVDYDLPVEEQSRWRV*
Ga0099829_111997951	3300009038	Vadose Zone Soil	RHLIRPDVDAATEGQRFAAFLSGYDLPVEEQRRWRV*
Ga0105245_100308734	3300009098	Miscanthus Rhizosphere	RGVAPPPRHLIRPDVDTTAQGQRLAAFLSGYDLPEAEQRRWRV*
Ga0099796_105864881	3300010159	Vadose Zone Soil	ALPPRHLIRPDVDAAAEGQRLADFLSGYDLPVEEQRRWRV*
Ga0134067_101118602	3300010321	Grasslands Soil	GVALPPRYLVRPQVDAVAEGQRFAAFLAGYDLPAEEQRRWRV*
Ga0134065_104598742	3300010326	Grasslands Soil	WRRLAPLLRHRAVALPPRHLLRPDMDEAAQRQRLAAFLADYDLPAEEQRRWRV*
Ga0134080_106153061	3300010333	Grasslands Soil	RYFVCPEVDAVAEGQRFAAFLAGYDLPAEEQRRWRV*
Ga0126372_122418072	3300010360	Tropical Forest Soil	ALPPRHLVSPDVDAAVEGERLAAFLAGYDLPVAEQRRWRV*
Ga0126379_116277692	3300010366	Tropical Forest Soil	PPRHIIRPDLDAAAEGQRLAVFLSGYDLPVEEQRRWRV*
Ga0126379_120782701	3300010366	Tropical Forest Soil	PRHLLRSRADAGAEGERLATFLADYDLPVEEQRRWRV*
Ga0134128_107524152	3300010373	Terrestrial Soil	LPPRHIIRPDIDAVLEAQRLAALLAGYDLPVEEQQRWRV*
Ga0105239_123486642	3300010375	Corn Rhizosphere	MPGNGLHWRRLAPLLRHRGIALPPRHIIRPDVDAAAEGQRLARWLDAYDLPVEEQQRWR*
Ga0126381_1006646043	3300010376	Tropical Forest Soil	PLLRHRGAALPPRHIIRTDIDAAAETQRLSAFLADYDLPPEEQRRWRV*
Ga0126381_1044184972	3300010376	Tropical Forest Soil	VAPPPRHLIRTDADAATETRRLGEFLASYDLPVEEQRRWRV*
Ga0126383_111205711	3300010398	Tropical Forest Soil	RRGVALPPRHLLRSKADARAEGERLANFLADYDLPVEEQRRWRV*
Ga0150983_148642801	3300011120	Forest Soil	RPRHLIRADAGAAAEARRLAEFLGGYDLPVEEQRRWRV*
Ga0137391_103738632	3300011270	Vadose Zone Soil	PLLRHRGVALPPRHLIRPDVDAATEGQRFAAFLSGYDLPVEEQRRWRV*
Ga0137389_101045141	3300012096	Vadose Zone Soil	RLAPLLRHRGAALPPRHFIRPDVDAAAEGQRFAVFLSGYDLPVEEQRRWRV*
Ga0137363_102182214	3300012202	Vadose Zone Soil	LHWRRLAPLLRHRGVALPPRHLIRPDVDAAAEAKRLAAFLADYDLPVEEQRRWRV*
Ga0137363_113035931	3300012202	Vadose Zone Soil	PRYLVRPELDAAAEGQRFAAFLAGYDLPAEEQRRWRV*
Ga0137378_111993472	3300012210	Vadose Zone Soil	GGLHWRGLAPLLRHRGVALPPRHLIRPGVDAAAEGQRLAGFLSGYDLPVEEQRRWRV*
Ga0157289_101775011	3300012903	Soil	HIIRPDVDAAAEQERLATWLNNYDLPVEEQQRWR*
Ga0137396_103775241	3300012918	Vadose Zone Soil	PLLRHRGVALPPRYLVRPELDAAAEGQRFAAFLAGYDLPAE*
Ga0137416_118599021	3300012927	Vadose Zone Soil	HRGVAPPPRHLIRPDVDAASEGQRFAAFLSGYDLPVEAQRHWRV*
Ga0137404_101280453	3300012929	Vadose Zone Soil	LRHRGVALPPRHLIRPDVDAATEGQRLALFLSGYDLPVEEQRRWRV*
Ga0137410_105265962	3300012944	Vadose Zone Soil	RHLIRPDVDAASEGQRFAAFLSGYDLPVEEQRRWRV*
Ga0164304_111075782	3300012986	Soil	NRGVVPPPRHLIRPDVDTTAQGQRLAAFLAGYDLPEAEQRRWRV*
Ga0164306_103359991	3300012988	Soil	GLHWRRLAPLLRNRGVVPPPRHLIRPDVDTTAQGQRLAAFLSGYDLPEAEQRRWRV*
Ga0163162_106869951	3300013306	Switchgrass Rhizosphere	LPPRHIIRPDVDAAAEAQRLARWLDAYDLPVDEQQRWR*
Ga0163163_111523712	3300014325	Switchgrass Rhizosphere	WRRLAPLLRDRGVVPPPRHLIRPDVDTTAQGQRLAAFLAGYDLPEAEQRRWRV*
Ga0182015_100908724	3300014495	Palsa	RLASLLRHRGVALPPCHLIRPTVDATAEGQQLAAFLVEYDLPLKEQRRLRG*
Ga0157379_106310842	3300014968	Switchgrass Rhizosphere	LAPLLRHRGVVALPPRHIVRPEFDAASEERRLAAFLTSYDLPLEEQHR
Ga0137420_10770612	3300015054	Vadose Zone Soil	HRGVALPPRYLVRPELDAAAEGQRFAAFLAGYDLPAEEQRRWRV*
Ga0137420_13814491	3300015054	Vadose Zone Soil	DAAARPELDAAAEGQRFAAFLAGYDLPAEEQRRWRV*
Ga0137409_100661931	3300015245	Vadose Zone Soil	RHRGVAPPPRHLIRPDVDAATEGQRLALFLSGYDLPVEEQRRWRV*
Ga0137409_105621352	3300015245	Vadose Zone Soil	HLIRPDVDVATEGQRFAAFLSGYDLPVEEQRRWRV*
Ga0132255_1003851273	3300015374	Arabidopsis Rhizosphere	LQHRGVALPPRHLLRSKADASAEGQRLATFLADYDLPVEEQRRWRV*
Ga0182041_104633692	3300016294	Soil	RGVALPPRHIIRPDQGAAAEGQRLGAFLASYDLPVEEQRRWRV
Ga0182035_106290072	3300016341	Soil	LHWRRLTPLLRHRGVALPPRHLIRPEAPAAAEGERLAKFLAGYDLPADEQRRWRV
Ga0182032_107265621	3300016357	Soil	RGVALPPRHIIRPDLDAAAEGQRLGAFLAGYDLPVEEHRRWRV
Ga0182034_103350282	3300016371	Soil	WRRLAPLLRHRGVMLPPRYIIRPDLEAVVEGQRLAGFLSGYDLPVEEQRRWRV
Ga0182040_103626222	3300016387	Soil	RGLRHRGVALPPRHIIRPDLDAAAEGQRLGAFLAGYDLPVEEQRRWRV
Ga0187809_100169491	3300017937	Freshwater Sediment	LAPLLRHRGAALPPRHIIRPDLDAAAEGQRLAAFLAGYDLPVEEQRRWRV
Ga0187781_112117892	3300017972	Tropical Peatland	APLWRNRGGALPSRHLIRPDIDAATEGQRLTAFLAGYDLPAAEQRRWRG
Ga0187766_101416023	3300018058	Tropical Peatland	HWRRFAPLLRHRGVALPPRHIIRADLDAALEGRRLAAFLTGYDLPV
Ga0066669_101378763	3300018482	Grasslands Soil	HLLRPDMDEAAQRQRLAAFLADYDLPAEEQRRWRV
Ga0137408_11822362	3300019789	Vadose Zone Soil	RYLVRPELDAAAEGQRFAAFLAGYDLPAEEQRRWRV
Ga0187768_10271291	3300020150	Tropical Peatland	RQRRVARPPRHLIRAQRGAAAEGQRLADFLARYDLPVEEQRRWRV
Ga0210399_106382182	3300020581	Soil	RLAPLLRHRGAALPPRYLVRPDVDAVAEGQRFAAFLAGYDLPAEEQHRWRV
Ga0210396_107943981	3300021180	Soil	VALPPRYLIRPEGGAAAEAERFALFLSGYDLPVEEQRRWRV
Ga0213882_102381121	3300021362	Exposed Rock	PRHLIRTDGDTGIEGGRLAAFLSGYDLPQEERRRWRV
Ga0210386_104531391	3300021406	Soil	RYLIRPDGDAAVEAERFALFLSGYDLPVEEQRRWRV
Ga0210394_113329951	3300021420	Soil	RGVGLPPRHIIRPDADPALEEQRLTELLASYDLPVEEQRRWRV
Ga0210409_102359614	3300021559	Soil	TALLRHRGVAPPPRHVIRTEVDAAIETQRLTDFLSGYDLPAQERRRWRV
Ga0126371_112958942	3300021560	Tropical Forest Soil	RLLQQRGVALPPRHLLRSRADAGAEGERLATFLADYDLPVEEQRRWRV
Ga0126371_115033311	3300021560	Tropical Forest Soil	LLRHRGAALPPRHIIRTDIDAAAETQRLSAFLADYDLPPEEQRRWRV
Ga0247669_10433051	3300024182	Soil	RGLAMPPRHLIRPDVDAASEGQKLAVFLSDYDLPPEEQHRWRV
Ga0207692_102593222	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	EPGNGLHWRRLAPLLRHRGVALPPRHIIRPELDATAEGERLTAFLSEYDLPLEERRRWRV
Ga0207699_102300842	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	RRLAPLLRNRGVVPPPRHLIRPDVDTTAQGQRLAAFLAGYDLPESEQRRWRV
Ga0207705_115252191	3300025909	Corn Rhizosphere	EPGHGLHWRRLAPLLRHRGIALPPRHIIKADVDAVAETHRLATWLDNYDLPVEEQRRWR
Ga0207646_118616972	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	GLHWRRLAPLLRHRGVALPPRYIVRPDVDAAFEGQRLAALLANYDLPVEEQHRWRV
Ga0207686_104359002	3300025934	Miscanthus Rhizosphere	PPRHLIRPDVDTTAQGQRLAAFLSGYDLPEAEQRRWRV
Ga0207689_102941592	3300025942	Miscanthus Rhizosphere	EAERDSHRSELAPLLRNRGVVPPPRHLIRPDVDTSDQGQRLAAFLAGYDLPEAEQRRWRV
Ga0207667_114593681	3300025949	Corn Rhizosphere	LLRNRGVVPPPRHLIRPDVDTTAQGQRLAAFLAGYDLPESEQRRWRV
Ga0207639_105443612	3300026041	Corn Rhizosphere	PPRHIIRPDVDAAAEAQRLGRWLDAYDLPVEEQQRWR
Ga0207641_115020471	3300026088	Switchgrass Rhizosphere	NGLHWRRLAPLLRNRGVVPPPRHLIRPDVDTTAQGQRLAAFLAGYDLPESEQRRWRV
Ga0209471_12039221	3300026318	Soil	HWRRLAPLLRHRAVALPPRHVLRPDMDEAAEGQRLAAFLADYDLPAEEQRRWRV
Ga0209158_12181812	3300026333	Soil	PPRHVLRPDMDEAAEGQRLAAFLADYDLPAEEQRRWRV
Ga0209807_13163191	3300026530	Soil	LRHRGVALPPRYLVCPEVDAVAEGQRFATFLAGYDLPAEEQRRWRV
Ga0209625_10651261	3300027635	Forest Soil	YLVRPDVDAVAEGQRFAAFLAGYDLPAEEQHRWRV
Ga0209139_101785302	3300027795	Bog Forest Soil	RGLAALLRHRGVKLPPRHLIRRDAEAATEGRRFTEFLSGYDLPATEQRRWRV
Ga0209811_104278621	3300027821	Surface Soil	LPPRHLLRSRADARAEGERLATFLAGYDLPVEEQRRWRV
Ga0209040_104459352	3300027824	Bog Forest Soil	APPPRFSLRPDADAAAEGQRLAAFLSGYDLPEEEQRRWRV
Ga0209580_102194411	3300027842	Surface Soil	APLLRHRGVALPPRHLLRPEAPATAEGQRLANFLTGYDLPAEQQRRWRV
Ga0209167_101255113	3300027867	Surface Soil	LHWRRLAPLLRHRRVALPPRHLIRAEVDAAVEARRLAAFLAGYDLPLEEQRRWRV
Ga0209488_108903412	3300027903	Vadose Zone Soil	HGLHWRRLAPLLRHRGVALPPRHIVRPDVDAALEGQRLAALLSSYDLPVEEQHRWRV
Ga0302228_101143461	3300028808	Palsa	PPRYLLRPDGDAAVEGQRLALFLSGYDLPVEEQRRWRA
Ga0311332_110294862	3300029984	Fen	GVLPLPRHLIRTEVNTAAEGQRLATFLSDYDLPVEEQRRWRL
Ga0302276_103733942	3300029992	Bog	WRRMAPLLKHRGVAQPLRHIVRPDADAALEAQRLATLLASYDLPIEEQRRWRV
Ga0302310_100210085	3300030737	Palsa	GVALPPRHIIRVQEDTVAEARRLAEFLAGYDLPPEEQRRWRPGVRGER
Ga0170834_1073813504	3300031057	Forest Soil	LRHRGVAPPPRYLIRPDVDAAAEGQRFAEFLSGYDLPVEEQRRWRV
Ga0170824_1014888163	3300031231	Forest Soil	LAPLLRHRGVAAPPRHLIRPDVDAAAEGQRFAVFLSGYDLPVEEQRHWRV
Ga0170824_1017486831	3300031231	Forest Soil	HRGVAPPPRYLIRPDVDAAAEGQRFAEFLSGYDLPVEEQRRWRV
Ga0170824_1035539411	3300031231	Forest Soil	HWRRLAPLLRHRSVALPPRHLLRPDIDAAAEGQRLADFLSGYDLPVEEQRRWRV
Ga0170824_1277041163	3300031231	Forest Soil	RRLAPLLRHRGVALPPRHLIRPDVDAASEGQKLTVFLSGYDLPPEEQHRWRV
Ga0170824_1289429284	3300031231	Forest Soil	VALPPRHFIRPDVDAAAEGRRFAEFLSGYDLPVEEQRRWRV
Ga0302307_102114202	3300031233	Palsa	LLRHRGVALPPRYLIRPEGDAAAEAERFALFLSGYDLPVEEQRRWRV
Ga0302318_104075011	3300031258	Bog	AQPLRHIVRPDADAALEAQRLATLLASYDLPIEEQRRWRV
Ga0318528_100723551	3300031561	Soil	GVALPPRHIIRPDLDAAAEGQRLGAFLAGYDLPVEEQRRWRV
Ga0318528_106050262	3300031561	Soil	HRGVALPPRHILRPDLDAAAERQRLAAFLTGYDLPLEEQRRWRV
Ga0318555_100926301	3300031640	Soil	PPRHILRPDRDAAAERQRLAAFLTGYDLPLEEQRRWRV
Ga0318574_107726331	3300031680	Soil	IWRGVALPPRHIIRPDRDAASEGQRLAVFLTGYDLPIEEQRRWRV
Ga0265342_104749901	3300031712	Rhizosphere	APLLRHRGAALPPRHIVRPDVDVALEGQRLAALLTGYDLPPDEQRRWRV
Ga0306917_105321652	3300031719	Soil	PLLRHRGVALPPRHIIRPDLDAAAEGQRLGAFLAGYDLPVEEQRRWRV
Ga0306917_110459741	3300031719	Soil	ARLLQQRGVALPPRHLLRSRTDARAQGERLATFLADYDLPVEEQRRWRV
Ga0318493_100505521	3300031723	Soil	LHWRRLAPLLRHRGVALPPRHIIRPDLDAAAEGQRLGAFLAGYDLPVEEQRRWRV
Ga0318501_100841131	3300031736	Soil	HIIRPDLDAAAEGQRLGAFLAGYDLPVEEQRRWRV
Ga0307468_1001037502	3300031740	Hardwood Forest Soil	LRRRGVTVPPRHVIRPDAGAVAESERLTAFLAGYDLPVEEQRRWRGRTQEDR
Ga0318492_102504761	3300031748	Soil	LLRHRGVALPPRHIIRPDLDAAAEGQRLGAFLAGYDLPVEEQRRWRV
Ga0318494_102455161	3300031751	Soil	RHIIRPDLDAAAEGQRLGAFLAGYDLPVEEQRRWRV
Ga0307475_100264631	3300031754	Hardwood Forest Soil	LVPLLRHRGVALPPRHLIRPEVDAAAERQRFAVFLSGYDLPVEQQRRWRV
Ga0307475_111154681	3300031754	Hardwood Forest Soil	LHWRRLAPLLRHRGVALPPRHLIRPDVDAAAEGQRFAVFLSGYDLPVEEQRRWRV
Ga0307475_115049881	3300031754	Hardwood Forest Soil	LAPLLRHRGVALPPRFSLRPDVDAAAEGQRFADFLSGYDLPVEEQRRWRV
Ga0318535_102088052	3300031764	Soil	PPRHIIRPDLDAGAEGQRLAAFLTGYDLPLEEQRRWRV
Ga0318554_100752151	3300031765	Soil	MLPPRHIIRPDLDAVVEGQRLAGFLSGYDLPVEEQRRWRV
Ga0318554_102849301	3300031765	Soil	RLLQQRGVALPPRHLLRSRTDARAQGERLATFLADYDLPVEEQRRWRV
Ga0318509_100296561	3300031768	Soil	RRRGVTLPPRHTIRPDLDAAAEGQRLAAFLTGYDLPLEEQRRWRV
Ga0318521_109895172	3300031770	Soil	LQQRGVALPPRHLLRSRTDARAQGERLATFLADYDLPVEEQRRWRV
Ga0318546_113310312	3300031771	Soil	GVALPPRHIIRPDRDAASEGQRLAVFLTGYDLPIEEQRRWRV
Ga0318543_104097451	3300031777	Soil	RGAALPPRHILRPDRDAAAERQRLAAFLTGYDLPLEEQRRWRV
Ga0318498_102543271	3300031778	Soil	LPPRHTIRPDLDAGAEGQRLAAFLTGYDLPLEEQRRWRV
Ga0318566_100825541	3300031779	Soil	GLHWRRLAPLLRHRGAPLPPRHVIRPEGEASTEAQRLATFLAGYDLPPEEQRRWRV
Ga0318547_102541341	3300031781	Soil	APLLRHRGVALPPRHIIRPDLDAAAEGQRLGAFLAGYDLPVEEQRRWRV
Ga0318547_105056992	3300031781	Soil	SPPRHILRPDRDAAAERQRLAAFLTGYDLPLEEQRRWRV
Ga0318529_105515382	3300031792	Soil	RLAPLLRRRGVTLPPRHIIRPDLDAGAEGQRLAAFLTGYDLPLEEQRRWRV
Ga0318548_102998662	3300031793	Soil	DGLHWRRLAPLLRHRGVALPPRHIIRPDLDAAAEGQRLGAFLAGYDLPVEEQRRWRV
Ga0318548_103055212	3300031793	Soil	LPPRHIIRPDLDAVVEGQRLAGFLSGYDLPVEEQRRWRV
Ga0318550_102805772	3300031797	Soil	LYRGVALPPRHVIRPDLDAAVERQRLAAFLTGYDLPVEEQRRWRV
Ga0318565_101485241	3300031799	Soil	LAPLLRHRGVALPPRHIIRPDLDAAAEGQRLGAFLAGYDLPVEEQRRWRV
Ga0307478_103440401	3300031823	Hardwood Forest Soil	TALLRHRGVAPPPRHVIRTEVDAAIETQRLTDFLSGYDLPAPERRRWRV
Ga0307478_112061842	3300031823	Hardwood Forest Soil	LPPRHLIRADVDAALEGQRLAGFLADYDLPVEEQRRWRV
Ga0310917_104919042	3300031833	Soil	PPAPLLRHRGVALPPRHIIRPDLDAAAEGQRLGAFLAGYDLPVEEQRRWRV
Ga0318511_101230132	3300031845	Soil	HWRRLAPLLRHHGVALPPRHLIRPAASAAAEGERLAKFLAGYDLPADEQRRWRV
Ga0318536_100482201	3300031893	Soil	HHGVALPPRHLIRPAASAAAEGERLAKFLAGYDLPADEQRRWRV
Ga0318536_102694541	3300031893	Soil	LRHRGVKLPPRHIIRPDLDAVVEGQRLAGFLSGYDLPVEEQRRWRV
Ga0318551_102155652	3300031896	Soil	VALPPRHLLRSRTDARAQGERLATFLADYDLPVEEQRRWRV
Ga0310909_100467804	3300031947	Soil	LAPLLRHRGAPLPPRHVIRPEGEASTEAQRLATFLAGYDLPPEEQRRWRV
Ga0318563_100424213	3300032009	Soil	LLRHRGAPLPPRHVIRPEGEASTEAQRLATFLAGYDLPPEEQRRWRV
Ga0318563_102689561	3300032009	Soil	APLLRRRGVTLPPRHTIRPDLDAAAEGQRLAAFLTGYDLPLEEQRRWRV
Ga0318563_104691992	3300032009	Soil	APRHIIRPDLDAAAEGQRLGAFLAGYDLPVEEQRRWRV
Ga0318569_102152101	3300032010	Soil	HWRRLAPLLRRRGVTLPPRHTIRPDLDAAAEGQRLAAFLTGYDLPLEEQRRWRV
Ga0315272_101558162	3300032018	Sediment	VALPPRHIIRADVDAALEAQRLTALLISYDLPESEQRRWRV
Ga0318556_102257101	3300032043	Soil	GYGAALPPRHILRPDRDAAAERQRLAAFLTGYDLPLEEQRRWRV
Ga0318513_104944621	3300032065	Soil	VTLPPRHIIRPDLDAGAEGQRLAAFLTGYDLPLEEQRRWRV
Ga0306924_100820891	3300032076	Soil	GLHWRRLAPLLRHHGVALPPRHLIRPAASAAAEGERLAKFLAGYDLPADEQRRWRV
Ga0318577_103659501	3300032091	Soil	PRHLLRSRTDARAQGERLATFLADYDLPVEEQRRWRV
Ga0318540_101116604	3300032094	Soil	HWRRLAPLLRHRGAPLPPRHVIRPEGEASTEAQRLATFLAGYDLPPEEQRRWRV
Ga0307471_1005858571	3300032180	Hardwood Forest Soil	GDSRDGLHWRRLAPLLRHRGAALPPRHFIRPDVDREAEAKRLADFLAGYDLPLEERRRWR
Ga0310914_114833732	3300033289	Soil	QQRGVALPPRHLLRSRTDARSEGERLATFLADYDLPVEEQRRWRV
Ga0318519_103714861	3300033290	Soil	KLPPRHIIRPDLDAVVEGQRLAGFLSGYDLPVEEQRRWRV
Ga0370515_0106113_1076_1210	3300034163	Untreated Peat Soil	HRGVAPPPRYLLRPDGDAAVEGQRLALFLSGYDLPVEEQRRWRV

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F037386

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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