Metagenome / Metatranscriptome Family F037413

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F037413
Family Type	Metagenome / Metatranscriptome
Number of Sequences	168
Average Sequence Length	57 residues
Representative Sequence	MKLAFMLGCLAAGLVLMIGFEAVITRVLGVLALFAFIVTGVFLIADPAFLERDDG
Number of Associated Samples	112
Number of Associated Scaffolds	168

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	33.96 %
% of genes near scaffold ends (potentially truncated)	15.48 %
% of genes from short scaffolds (< 2000 bps)	57.74 %
Associated GOLD sequencing projects	104
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.71

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (59.524 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (25.595 % of family members)
Environment Ontology (ENVO)	Unclassified (31.548 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.024 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 57.83% β-sheet: 0.00% Coil/Unstructured: 42.17%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.71
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.71
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
f.63.1.1: Claudin	d3x29a_	3x29	0.79535
a.138.1.3: Di-heme elbow motif	d1oaha_	1oah	0.79146
a.118.8.0: automated matches	d6kp3a_	6kp3	0.77483
a.25.1.1: Ferritin	d1j30a_	1j30	0.77258
a.25.1.1: Ferritin	d1lkoa1	1lko	0.76925

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 168 Family Scaffolds
PF02322	Cyt_bd_oxida_II	41.07
PF00069	Pkinase	7.14
PF04024	PspC	7.14
PF01740	STAS	6.55
PF13466	STAS_2	5.95
PF04879	Molybdop_Fe4S4	4.76
PF01654	Cyt_bd_oxida_I	2.98
PF00196	GerE	1.79
PF01226	Form_Nir_trans	1.79
PF13581	HATPase_c_2	1.19
PF00535	Glycos_transf_2	0.60
PF02730	AFOR_N	0.60
PF00384	Molybdopterin	0.60
PF09859	Oxygenase-NA	0.60
PF13275	S4_2	0.60
PF13649	Methyltransf_25	0.60
PF08867	FRG	0.60

COG ID	Name	Functional Category	% Frequency in 168 Family Scaffolds
COG1294	Cytochrome bd-type quinol oxidase, subunit 2	Energy production and conversion [C]	41.07
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	28.57
COG1271	Cytochrome bd-type quinol oxidase, subunit 1	Energy production and conversion [C]	2.98
COG2116	Formate/nitrite transporter FocA, FNT family	Inorganic ion transport and metabolism [P]	1.79
COG2414	Aldehyde:ferredoxin oxidoreductase	Energy production and conversion [C]	0.60

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	59.52 %
Unclassified	root	N/A	40.48 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	59.52 %
Unclassified	root	N/A	40.48 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	59.52 %
Unclassified	root	N/A	40.48 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	55.36 %
Unclassified	root	N/A	40.48 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.60 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	54.17 %
Unclassified	root	N/A	40.48 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.48 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	35.71 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2.98 %
Rubrobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria	1.79 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.48 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	35.12 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	2.38 %
Rubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales	1.79 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.60 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	0.60 %
Thermoleophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.48 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	14.88 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.38 %
Baekduiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Baekduiaceae	1.79 %
Conexibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae	1.19 %
unclassified Solirubrobacterales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales	0.60 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	0.60 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.60 %
Thermoleophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.48 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	14.88 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.38 %
Baekduia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Baekduiaceae → Baekduia	1.79 %
Conexibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	1.19 %
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	0.60 %
unclassified Thermoleophilaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae	0.60 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	0.60 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.48 %
Solirubrobacter pauli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter pauli	2.38 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.38 %
Baekduia soli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Baekduiaceae → Baekduia → Baekduia soli	1.79 %
unclassified Solirubrobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter	1.19 %
Streptomyces aurantiacus group	species group	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces aurantiacus group	0.60 %
Thermoleophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	0.60 %
Conexibacter woesei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	0.60 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	0.60 %
Conexibacter arvalis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter arvalis	0.60 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.48 %
Solirubrobacter pauli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter pauli	2.38 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.38 %
Baekduia soli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Baekduiaceae → Baekduia → Baekduia soli	1.79 %
Solirubrobacter sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp.	0.60 %
Solirubrobacter sp. URHD0082	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	0.60 %
Streptomyces flaveus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces aurantiacus group → Streptomyces flaveus	0.60 %
Thermoleophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	0.60 %
Conexibacter woesei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	0.60 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	0.60 %
Conexibacter arvalis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter arvalis	0.60 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	0.60 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_103723920	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	637	Open in IMG/M
3300001305\|C688J14111_10148651	Not Available	720	Open in IMG/M
3300001686\|C688J18823_10010907	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	5960	Open in IMG/M
3300002568\|C688J35102_119382699	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter arvalis	684	Open in IMG/M
3300002568\|C688J35102_120349572	Not Available	1006	Open in IMG/M
3300002568\|C688J35102_120399065	All Organisms → cellular organisms → Bacteria	1040	Open in IMG/M
3300002568\|C688J35102_120640426	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1281	Open in IMG/M
3300002568\|C688J35102_120754493	All Organisms → cellular organisms → Bacteria	1492	Open in IMG/M
3300003998\|Ga0055472_10031199	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp.	1246	Open in IMG/M
3300004081\|Ga0063454_100183192	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1163	Open in IMG/M
3300004081\|Ga0063454_100265207	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1042	Open in IMG/M
3300005327\|Ga0070658_11915299	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	512	Open in IMG/M
3300005332\|Ga0066388_107624094	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	542	Open in IMG/M
3300005334\|Ga0068869_101528648	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	593	Open in IMG/M
3300005336\|Ga0070680_101509125	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	582	Open in IMG/M
3300005341\|Ga0070691_10733547	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	596	Open in IMG/M
3300005347\|Ga0070668_101021044	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	744	Open in IMG/M
3300005438\|Ga0070701_10808721	All Organisms → cellular organisms → Bacteria → Terrabacteria group	640	Open in IMG/M
3300005455\|Ga0070663_102092600	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	510	Open in IMG/M
3300005456\|Ga0070678_100825210	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	843	Open in IMG/M
3300005458\|Ga0070681_11519290	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	594	Open in IMG/M
3300005459\|Ga0068867_101134222	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	715	Open in IMG/M
3300005530\|Ga0070679_100569513	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1076	Open in IMG/M
3300005549\|Ga0070704_100902258	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	795	Open in IMG/M
3300005562\|Ga0058697_10614301	Not Available	569	Open in IMG/M
3300005887\|Ga0075292_1063178	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	550	Open in IMG/M
3300005981\|Ga0081538_10241322	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	696	Open in IMG/M
3300006169\|Ga0082029_1137708	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1050	Open in IMG/M
3300006169\|Ga0082029_1212710	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300006845\|Ga0075421_100468863	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1501	Open in IMG/M
3300006847\|Ga0075431_100519844	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1180	Open in IMG/M
3300006876\|Ga0079217_10367498	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	833	Open in IMG/M
3300006894\|Ga0079215_10262919	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	924	Open in IMG/M
3300006894\|Ga0079215_11410265	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	545	Open in IMG/M
3300006918\|Ga0079216_10751560	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	706	Open in IMG/M
3300006969\|Ga0075419_10722717	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	708	Open in IMG/M
3300007004\|Ga0079218_11009003	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	835	Open in IMG/M
3300007790\|Ga0105679_10187262	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1494	Open in IMG/M
3300009147\|Ga0114129_12590348	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	605	Open in IMG/M
3300009148\|Ga0105243_10451714	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1206	Open in IMG/M
3300009789\|Ga0126307_10055418	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3102	Open in IMG/M
3300009789\|Ga0126307_11329069	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Baekduiaceae → Baekduia → Baekduia soli	582	Open in IMG/M
3300009840\|Ga0126313_10052578	All Organisms → cellular organisms → Bacteria	2878	Open in IMG/M
3300009840\|Ga0126313_10113896	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2005	Open in IMG/M
3300009840\|Ga0126313_10473129	All Organisms → cellular organisms → Bacteria	1001	Open in IMG/M
3300010036\|Ga0126305_10819290	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	633	Open in IMG/M
3300010038\|Ga0126315_10753495	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	639	Open in IMG/M
3300010038\|Ga0126315_10985989	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	564	Open in IMG/M
3300010039\|Ga0126309_11001446	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	561	Open in IMG/M
3300010040\|Ga0126308_10005839	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	5826	Open in IMG/M
3300010040\|Ga0126308_10130730	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1569	Open in IMG/M
3300010040\|Ga0126308_11056209	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	571	Open in IMG/M
3300010042\|Ga0126314_10957763	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Baekduiaceae → Baekduia → Baekduia soli	634	Open in IMG/M
3300010042\|Ga0126314_11080029	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	597	Open in IMG/M
3300010042\|Ga0126314_11374138	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	530	Open in IMG/M
3300010044\|Ga0126310_10773204	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	736	Open in IMG/M
3300010044\|Ga0126310_11094347	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Baekduiaceae → Baekduia → Baekduia soli	633	Open in IMG/M
3300010044\|Ga0126310_11430449	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	564	Open in IMG/M
3300010400\|Ga0134122_11059319	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	800	Open in IMG/M
3300011332\|Ga0126317_11078435	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	615	Open in IMG/M
3300012469\|Ga0150984_106223257	Not Available	771	Open in IMG/M
3300014488\|Ga0182001_10699019	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	505	Open in IMG/M
3300015371\|Ga0132258_11596222	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1647	Open in IMG/M
3300017792\|Ga0163161_10755224	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	814	Open in IMG/M
3300018432\|Ga0190275_10744001	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1040	Open in IMG/M
3300018432\|Ga0190275_10963581	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	923	Open in IMG/M
3300018432\|Ga0190275_10975208	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	918	Open in IMG/M
3300018466\|Ga0190268_11041007	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	658	Open in IMG/M
3300018466\|Ga0190268_11385919	Not Available	601	Open in IMG/M
3300018466\|Ga0190268_11922319	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	540	Open in IMG/M
3300018469\|Ga0190270_10675197	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1020	Open in IMG/M
3300020181\|Ga0196958_10006833	All Organisms → cellular organisms → Bacteria	3196	Open in IMG/M
3300022756\|Ga0222622_10119206	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1655	Open in IMG/M
3300024430\|Ga0196962_10098619	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	906	Open in IMG/M
3300025918\|Ga0207662_10370143	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	966	Open in IMG/M
3300025921\|Ga0207652_10609325	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	979	Open in IMG/M
3300025927\|Ga0207687_11636689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	552	Open in IMG/M
3300025935\|Ga0207709_10934371	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	706	Open in IMG/M
3300025944\|Ga0207661_11246331	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter pauli	684	Open in IMG/M
3300025945\|Ga0207679_10265124	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1467	Open in IMG/M
3300025961\|Ga0207712_11701628	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	565	Open in IMG/M
3300026035\|Ga0207703_10714753	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	953	Open in IMG/M
3300026121\|Ga0207683_11592917	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	602	Open in IMG/M
3300027907\|Ga0207428_10032352	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	4302	Open in IMG/M
3300028380\|Ga0268265_11500382	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	678	Open in IMG/M
3300028705\|Ga0307276_10021336	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1273	Open in IMG/M
3300028810\|Ga0307294_10288033	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	593	Open in IMG/M
3300031091\|Ga0308201_10208921	All Organisms → cellular organisms → Bacteria → Terrabacteria group	650	Open in IMG/M
3300031229\|Ga0299913_10150519	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2296	Open in IMG/M
3300031824\|Ga0307413_10292800	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1231	Open in IMG/M
3300031852\|Ga0307410_10110203	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1991	Open in IMG/M
3300031852\|Ga0307410_10661913	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	877	Open in IMG/M
3300031901\|Ga0307406_10295356	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1242	Open in IMG/M
3300031901\|Ga0307406_10632600	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	886	Open in IMG/M
3300031911\|Ga0307412_11136576	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter pauli	697	Open in IMG/M
3300031995\|Ga0307409_100801186	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter pauli	950	Open in IMG/M
3300031995\|Ga0307409_101642864	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	671	Open in IMG/M
3300031995\|Ga0307409_101805688	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	641	Open in IMG/M
3300031995\|Ga0307409_101835379	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	635	Open in IMG/M
3300031996\|Ga0308176_11747438	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	664	Open in IMG/M
3300032002\|Ga0307416_100054513	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces aurantiacus group → Streptomyces flaveus	3215	Open in IMG/M
3300032004\|Ga0307414_11469839	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter pauli	634	Open in IMG/M
3300032005\|Ga0307411_10136731	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1801	Open in IMG/M
3300032005\|Ga0307411_11994340	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	542	Open in IMG/M
3300032080\|Ga0326721_10107204	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1348	Open in IMG/M
3300032159\|Ga0268251_10449077	Not Available	568	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	70.83%
Host-Associated	Host-Associated	29.17%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	67.86%
Plants	Host-Associated → Plants	29.17%
Aquatic	Environmental → Aquatic	2.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	67.26%
Rhizosphere	Host-Associated → Plants → Rhizosphere	19.64%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.74%
Freshwater	Environmental → Aquatic → Freshwater	1.19%
Sediment	Environmental → Aquatic → Sediment	1.19%
Phylloplane	Host-Associated → Plants → Phylloplane	1.19%
Marine	Environmental → Aquatic → Marine	0.60%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.60%
Roots	Host-Associated → Plants → Roots	0.60%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	50.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	15.48%
Loam	Environmental → Terrestrial → Soil → Loam	14.88%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.17%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.57%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.98%
Sand	Environmental → Terrestrial → Soil → Sand	1.79%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.19%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.19%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.19%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	1.19%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.60%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.60%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.60%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.60%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	43.45%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	15.48%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	8.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.36%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.17%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.57%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.57%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.98%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	1.79%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.19%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.19%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.19%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.19%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.19%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	1.19%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.60%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.60%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.60%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.60%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.60%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	0.60%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	25.60%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	15.48%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	8.93%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	8.33%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.57%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.98%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.38%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.79%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	1.79%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.79%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.79%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.19%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.19%
Termite Nest	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest	1.19%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.19%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.19%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.19%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.19%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.19%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.19%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	1.19%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.60%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.60%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.60%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.60%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.60%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.60%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.60%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	0.60%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.60%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001305	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003998	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300005887	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_403	Environmental	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300006169	Termite nest microbial communities from Madurai, India	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300007790	Microbial communities of desert soil contaminated with blood from dead anthrax infected zebra in Etosha National Park, Namibia. Combined Assembly of 14 sequencing projects	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011332	Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1	Environmental	Open in IMG/M
3300012938	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t2i015	Environmental	Open in IMG/M
3300014488	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300020181	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1+v_10	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300024430	Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_20	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028704	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_379	Environmental	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300028707	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148	Environmental	Open in IMG/M
3300028710	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380	Environmental	Open in IMG/M
3300028712	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_139	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028754	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028810	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300031091	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300031455	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 23_S	Environmental	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032080	Soil microbial communities from Southern Great Plains, Lamont, Oklahoma, United States - SGP_1_2016	Environmental	Open in IMG/M
3300032159	Agave microbial communities from Guanajuato, Mexico - As.Ma.e (v2)	Host-Associated	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiDRAFT_24068943	3300000033	Soil	MRWLPVMLGCLVVGLALMLAFESWITRLLGVLALFAFIVIGVFLIADPAFLAEEEAESS*
JGI10216J12902_1037239202	3300000956	Soil	MKLLPVALGCLAVGLVLMIGFEATITRVLGVLALFAFIVIGVFLIADPAFLDEEDG*
C688J14111_101486511	3300001305	Soil	VSXRALTALMLGGGAAGLVLMFLFEATITRILGVLGLFTFIVAGVFLIADPEFLGDEEE*
C688J18823_100109074	3300001686	Soil	VSHRALTALMLGGGAAGLVLMFLFEATITRILGVLGLFTFIVAGVFLIADPEFLGDEEE*
C688J35102_1187754432	3300002568	Soil	MRWLPVMLGCLVVGLVLMLVFESAISRVLGLLALFAFIVIGVFLIADPAFLAEEDDERVGSRRA*
C688J35102_1188935082	3300002568	Soil	MRWLPVMLGCLVAGLALMLVFESAISRVLGILALFAFIVIGVFLIADPAFLAEDDEERVGSRRA*
C688J35102_1193826991	3300002568	Soil	MFGCLAIGLVLMLGFEAAVTRVLGVLALFAFIVLGVFLIADPELLDGDDG*
C688J35102_1197669191	3300002568	Soil	MRWLPVMLGCLVAGLALMLVFDSAITRVLGVLALFAFIVIGVFLIADPAFLAEEDE*
C688J35102_1199235122	3300002568	Soil	VSRRAALGLMFGALLVGFVAMLGFESWYTRALGVLCLFTFIVTGVFLIADPAFLAEEDEAA*
C688J35102_1203495722	3300002568	Soil	MFGSLGLGLGLMLVFEHPLTRVVGVLALFTFIVSGVFLIADPAFLAEDDDAT*
C688J35102_1203990652	3300002568	Soil	VKLALMLGSFAVGLVLMVAFEHPITRILGVLALFTFLVTGVFLIADPVALGQEEDGGEDIGARKG*
C688J35102_1206404263	3300002568	Soil	MKVALMFGSLAVGLVLMIGFEATLTRIVGVLALFTFILTGVFLIADPAFLERDEDG*
C688J35102_1207544932	3300002568	Soil	MKPLAFMLGSFVVGLVLMVAFESVVPRVLGLLALFAFIITGVFLIADPAFLGQDEDGGDDTGRAEG*
Ga0055472_100311993	3300003998	Natural And Restored Wetlands	MKLAFMLGCLAAGLVLMIGFEAVITRVLGVLALFAFIVTGVFLIADPAFLERDDG*
Ga0063454_1001831922	3300004081	Soil	MFGCLAIGLVLMLGFEAAVTRVLGVLALFAFIVLGVFLIADPDLLDGDDG*
Ga0063454_1002652071	3300004081	Soil	MKRLVPLTIACLVVGLVAMLGFEYPLTRVIGVLALFAFIVGGVFAIADPVFLDEDDG*
Ga0063454_1014202802	3300004081	Soil	MLACLAAGLVLMVGFESAITRILGLLALFAFIVIGVFLIADPAFLAEEDE*
Ga0063455_1009355031	3300004153	Soil	MKWLPVMLGCLGVGLALMLAFESWITRLLGVLALFAFIVIGVFLIADPAFLAEAEEEN*
Ga0062595_1016221592	3300004479	Soil	MLGCLAVGLVLMLGFEAAITRLLGVVALFAFIVIGVFLIADPELLDADDG*
Ga0070658_119152991	3300005327	Corn Rhizosphere	MFGSLAVGLVLMIGFEAMVTRIIGVLALFTFIITGVFLIADPAFLERDEEDA*
Ga0066388_1076240942	3300005332	Tropical Forest Soil	MKLALLFGSLAVGLILMIGFEHMVTRILGLIALFTFIITGVFLIADPKFLERDED*
Ga0068869_1015286482	3300005334	Miscanthus Rhizosphere	MRLALLFGSLAAGLVLMIGFEHVLTRILGVLALFTFIVTGVFLIADPAFLD
Ga0070680_1015091251	3300005336	Corn Rhizosphere	MRVVLLFACLAAGLVLMIGFDAAITRVLGVLALFAFIVLGVFLIADPELLDSDDF*
Ga0070691_107335472	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MKLALLFGSLAAGLVLMIGFEHVLTRILGVLALFTFIVTGVFLIADPAFLEREED*
Ga0070668_1010210442	3300005347	Switchgrass Rhizosphere	MKVALMFGSLAVGLVLMIGFEAMVTRIIGVLALFTFIITGVFLIADPAFLEREDD*
Ga0070701_108087212	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MFGSLAVGLVLMIGFEAVVTRVFGVLALFAFIVTGVFLIADPAFLKADED*
Ga0070663_1020926002	3300005455	Corn Rhizosphere	MKLALLFGSLAAGLVLMIGFEHVLTRVLGVLALFTFIVTGVFLIADPAFLDRDDD*
Ga0070678_1008252102	3300005456	Miscanthus Rhizosphere	MRLALLFGSLAAGLVLMIGFEHVLTRVLGVLALFTFIVTGVFLIADPAFLDRDDD*
Ga0070681_115192902	3300005458	Corn Rhizosphere	MKVALMFGSLAVGLVLMIGFDTWYTRLFGVLALFTFIVTGVFLIADPAFLEREED*
Ga0068867_1011342222	3300005459	Miscanthus Rhizosphere	MKVALMFGSLAVGLVLMIGFEAMVTRIIGVLALFTFIITGVFLIADPAFLERDEEDA*
Ga0070679_1005695132	3300005530	Corn Rhizosphere	MFGSLAVGLVLMIGFDTWYTRLFGVLALFTFIVTGVFLIADPAFLEREED*
Ga0070704_1009022582	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MKVALMFGSLAVGLVLMIGFEAMLTRIVGVLALFTFIITGVFLIADPAFLERED
Ga0058697_106143011	3300005562	Agave	MFGCLGAGLVLMIGFEAPVTRVLGILALFAFIVLGVFLIADPELLDSDDV*
Ga0075292_10631782	3300005887	Rice Paddy Soil	MKVALMFGSLAVGLVLMIGFDVMLTRIVGVLALFTFIITGVFLIADPAFLEREEDD*
Ga0081538_102413222	3300005981	Tabebuia Heterophylla Rhizosphere	MKLALLFGSLAAGLVLMIGFEHVLTRVLGVLALFTFIVTGVFLIADPTFLERDETD*
Ga0082029_11377082	3300006169	Termite Nest	MKLALLLGSFAMGLVLMLGFEHVLTRILGVLALFTFIVTGVFLIADPAWLGSDEESMRGDHREP*
Ga0082029_12127102	3300006169	Termite Nest	MKLALLFGSLAAGLVLMIGFEAVVTRVLGVLALFTFIVTGVFLIADPAFLDRDED*
Ga0075421_1004688633	3300006845	Populus Rhizosphere	PHMKLALLFGSLAAGLVLMIGFEHVVTRVLGVLALFTFIVTGVFLIADPAFLDRDED*
Ga0075431_1005198442	3300006847	Populus Rhizosphere	MKLALLFGSLAAGLVLMIGFEHVVTRVLGVLALFTFIVTGVFLIADPAFLDRDED*
Ga0079217_103674982	3300006876	Agricultural Soil	MKLALMLGSFAAGLVLMVGFEHVVTRILGVLALFCFIVTGVFLIADPVALGKEEDTMPDERAP*
Ga0068865_1005165972	3300006881	Miscanthus Rhizosphere	MRWLPVMLGCLGVGLALMLVFDNWITRLLGVLALFAFIVIGVFLIADPAFLAAEED*
Ga0079215_102629191	3300006894	Agricultural Soil	GLRLGERAVVKLALMLGSFAAGLVLMVGFEHVVTRILGVLALFCFLVTGVFLIADPVFLGKEEEDMQDER*
Ga0079215_114102652	3300006894	Agricultural Soil	MKLALMLGSFAVGLVLMVGFEHVVTRIIGVLALFTFLVTGVFLIADPVFLGRDEDDMQEEPR*
Ga0079216_107515602	3300006918	Agricultural Soil	VKLALMLGSFAAGLVLMMGFEHVVTRILGVLALFCFLVTGVFLIADPVFLGKEEEDMQDER*
Ga0075419_107227172	3300006969	Populus Rhizosphere	MKLALLFGSLAAGLVLMIGFEHVVTRVLGVLALFTFIVTGVFLIADPAFLD
Ga0079218_110090032	3300007004	Agricultural Soil	VKLALMLGSFAAGLVLMVGFEHVVTRILGVLALFCFLVTGVFLIADPVFLGKEEEDMQDERQP*
Ga0105679_101872622	3300007790	Soil	VKKVAPILGAFALGLVLMVGFEHVITRILGLLCLFAFIVMGVFAIADPDALSQVEDPEQRTGAHEG*
Ga0114129_125903482	3300009147	Populus Rhizosphere	LGSFAVGLVLMVGFEHVVTRILGVLALFCFIVTGVWEIADPDLLGREEEGMRDERTP*
Ga0105243_104517142	3300009148	Miscanthus Rhizosphere	MKVALMFGSLAVGLVLMIGFEAMLTRIVGVLALFTFIITGVFLIADPAFLERDEEDA*
Ga0111538_134663701	3300009156	Populus Rhizosphere	MLGCLVVGLALMLAFESWITRLLGVLALFAFIVIGVFLIADPAFLAEEEAESS*
Ga0105249_116330651	3300009553	Switchgrass Rhizosphere	LRAMKALAVGCLVVGVVLMVAFEHTITRVLGVLALFEFIVIGVFLVADPAFLEEEQDR*
Ga0126307_100554184	3300009789	Serpentine Soil	VKLALMFGSLALGLGLMLAFEAPATRVIGVTALFTFIVTGVFLIADPAFLAAEEGSTEAEREGR*
Ga0126307_113290692	3300009789	Serpentine Soil	SFAVGLVLMVAFEHPVTRILGVLALFTFLVTGVFLIADPVALGQEEDGEGDIGARKG*
Ga0126313_100525784	3300009840	Serpentine Soil	MKVAFMFGSLAVGLVLMIGFEAVLTRVVGVLALFAFIVTGVFLIADPAFLDADEDQGT*
Ga0126313_101138962	3300009840	Serpentine Soil	VKLALMLGSFAVGLVLMVAFENVFTRILGVLALFTFLIMGVFLIADPVALGQDEDGRDDIGARKG*
Ga0126313_104731292	3300009840	Serpentine Soil	VKLAVMLGSFAVGLVLMMAFEHPITRILGVLALFTFLITGVFLIADPVALGQEEDGQEDIGARKG*
Ga0126313_108215592	3300009840	Serpentine Soil	MLGCLAAGLALMLVFDSAITRVLGVLALFAFIVIGVFLIADPAFLAEEDE*
Ga0126313_117383012	3300009840	Serpentine Soil	LMFGALAVGMLLMLIFEHWVTRVVGVAALFAFIVSGVFLIADPAFLAEDDEG*
Ga0126305_108192902	3300010036	Serpentine Soil	MKLALMFGSLALGLGLMLAFEAPVTRVIGVTALFTFIVTGVFLIADPAFLAAEEGSTEAEREGR*
Ga0126315_107534952	3300010038	Serpentine Soil	MKGIGLMLGAFGLGLVLMVAFEHPVTRILGLLCLFTFIVTGVFLIADPASLGKEEDLRDDSRRREG*
Ga0126315_109859892	3300010038	Serpentine Soil	MKVAFMFGSLAVGLVLMIGFEAVLTRVVGVLALFAFIVTGVFLIADPAFLDRDDD*
Ga0126309_110014462	3300010039	Serpentine Soil	VKLALMLGSFAAGLVLMVGFEHVVTRILGVLALFCFLVTGVFLIADPVFLGKEEEDMQDER*
Ga0126308_100058395	3300010040	Serpentine Soil	MKVVFMFGSLAVGLVLMIGFEAVLTRVVGVLALFAFIVTGVFLIADPAFLDADEDQGT*
Ga0126308_101175132	3300010040	Serpentine Soil	MLGCLVAGLALMLVFDSAITRVLGVVALFAFIVIGVFLIADPAFLAEEDE*
Ga0126308_101307303	3300010040	Serpentine Soil	VKLALMLGSFAVGLVLMVAFENVFTRILGVLALFTFLITGVFLIADPVALGQEEDGEDDIGARRG*
Ga0126308_110562091	3300010040	Serpentine Soil	LVALMFAALAVGLVLMLGFEAVVTRIVGVIALFTFIVTGVFLIADPTFLAADDDAYP*
Ga0126314_102278652	3300010042	Serpentine Soil	MLGCLAAGLALMLVFDSAITRVLGVLALFAFIVIGVFLIADPAFLALAEEDE*
Ga0126314_109577632	3300010042	Serpentine Soil	VKLALMLGSFAVGLVLMVAFEHPVTRILGVLALFTFLVTGVFLIADPVALGQEEDAGDDIGSRRG*
Ga0126314_110800291	3300010042	Serpentine Soil	GREGVKLALMLASFAVGLVLMVGFEHVVTRILGVLALFCFLVTGVFLIADPDLLGKEEEGMPDDRSP*
Ga0126314_113741382	3300010042	Serpentine Soil	MKLALLFGSLAVGLVLMLGFDHALTRIVGVLALFTFIVTGVFLIADPAFLDTDDD*
Ga0126310_101370853	3300010044	Serpentine Soil	MLGCLAAGLALMLGFESAITRVLGVVALFAFIVIGVFLIADPAFLAEEDE*
Ga0126310_107732042	3300010044	Serpentine Soil	MKLALLFGSLAVGLVLMLGFEHALTRIVGVLALFTFIVTGVFLIADPAFLDTDDD*
Ga0126310_110943471	3300010044	Serpentine Soil	RGRHGVKLAVMLGSFAVGLVLMMAFEHPITRILGVLALFTFLITGVFLIADPVALGQEEAGQEDIGARKG*
Ga0126310_114304491	3300010044	Serpentine Soil	VKLALMLGSFAVGLVLMVVFEHPVTRILGVLALFTFLITGVFLIADPVALGQEEDGQEDIGARKG*
Ga0126311_101323393	3300010045	Serpentine Soil	MLGCLMAGLALMLVFESAITRVLGVLALFAFIVIGVFLIADPAFLAEEDEG*
Ga0126311_103554043	3300010045	Serpentine Soil	AAGLALMLGFESAITRVLGVVALFAFIVIGVFLIADPAFLAEEDE*
Ga0126306_104525672	3300010166	Serpentine Soil	MAVMLGCLLVGMGLMLVFESALSRVVGLLALFAFIVIGVFLIADPEFLASEEEDQVGSRRA*
Ga0134122_110593192	3300010400	Terrestrial Soil	MKVALMFGSLAVGLVLMIGFEAMLTRIVGVLALFTFIITGVFLIADPAFLERDDD*
Ga0126317_109816543	3300011332	Soil	GCLGVGLALMLACESWITRALGVLALFAFIVIGVFLIADPAFLAEDEKES*
Ga0126317_110784352	3300011332	Soil	VKLALMLGSFAVGLVLMVAFENVFTRILGVLALFTFLVTGVFLIADPVALGQEEDGGDDIGARKG*
Ga0150985_1000071712	3300012212	Avena Fatua Rhizosphere	MLGCLVVGLVLMLVFESAISRVLGLLALFAFIVIGVFLIADPAFLAEEDDERVGSRRA*
Ga0150985_1063597312	3300012212	Avena Fatua Rhizosphere	MKWLPVMLGCLGVGLALMLAFESWITRLLGVLALFAFIVIGVFLIADPAFLAEEDES*
Ga0150985_1118519452	3300012212	Avena Fatua Rhizosphere	MRWLGGMLACLAAGLVLMVGFESAITRILGLLALFAFIVIGVFLIADPAFLAVDDRD*
Ga0150984_1061973162	3300012469	Avena Fatua Rhizosphere	GVGLALMLAFESWITRLLGVLALFAFIVIGVFLIADPAFLAEAEEEN*
Ga0150984_1062232571	3300012469	Avena Fatua Rhizosphere	LALMLGSFAVGLVLMVAFENVFTRIIGVLALFTFLITGVFLIADPVALGQEEDGGEDIGARKG*
Ga0150984_1180120142	3300012469	Avena Fatua Rhizosphere	MLGCLVAGLALMLVFDSAITRVLGVLALFAFIVIGVFLIADPAFLAEEDE*
Ga0157288_103957782	3300012901	Soil	MLGCLIVGLALMLAFESWITRLLGVLALFAFIVIGVFLIADPAFLTEEEEESS*
Ga0162651_1000829762	3300012938	Soil	VSRRLVACLVCLVAGVGLMVFSELAITRVLGVLALFSFVVIGVFTIADPEFLARDDES*
Ga0182001_106990192	3300014488	Soil	MKLALLFGSLAAGLVLMIGFEAAVTRVLGVLALFAFIVLGVFLIADPELLDADDG*
Ga0132258_115962223	3300015371	Arabidopsis Rhizosphere	MKVALMFGSLAVGLVLMIGFEAMLTRIVGVLALFTFIITGVFLIADPAFLERDDEA*
Ga0132257_1045206432	3300015373	Arabidopsis Rhizosphere	WLPVMLGCLVAGLALMLVFDSAITRMLGVIALFAFIVIGVFLIADPAFLAEEEKEG*
Ga0163161_107552241	3300017792	Switchgrass Rhizosphere	MKVALMFGSLAVGLVLMIGFEATVTRIIGVLALFTFIITGVFLIADPA
Ga0190266_100952553	3300017965	Soil	PPMRWLPVMLGCLVVGLALMLAFESAITRLLGVLALFAFIVIGVFLIADPAFLAEEDEA
Ga0190266_112942221	3300017965	Soil	MRWLPVMLGCLVVGLALMLAFESWISRLLGVLALFAFIVIGVFLIADPTFLAEEDET
Ga0190265_109189381	3300018422	Soil	KKALMGVMLGCPAVGMVVMLVFDSAIARVAGVLALFAFIVTGVFLIADPVFLAAEDDEDRVGSRRAG
Ga0190265_117235222	3300018422	Soil	MRWLPVMLGCLVAGLALMLAFESAITRVLGLLALFAFIVIGVFLIADPAFLAAEDEEG
Ga0190275_102515343	3300018432	Soil	MRWLPVMLGCLAAGLVLMLAFESAITRVLGLLALFAFIVIGVFLIADPAFLAAEDEEG
Ga0190275_107440012	3300018432	Soil	MRWLAVMLASLAVGLVLMIGFEHAITRVLGLLALFAFIVIGVFLIADPAFLAAEDEED
Ga0190275_109635812	3300018432	Soil	VKLALMLGSFAVGLVLMVAFEHPVTRILGVLALFTFLVTGVFLIADPVALGQEEDGGEDIGARKG
Ga0190275_109752082	3300018432	Soil	VKLALMLGSFAAGLVLMVGFEHVVTRILGVLALFCFLVTGVFLIADPVFLGKEEEDMQDE
Ga0190268_110410072	3300018466	Soil	MKLALMLGSFAVGLVLMVGFEHVVTRIIGVLALFTFLVTGVFLIADPVFLGRDE
Ga0190268_113859192	3300018466	Soil	AMKLALMLGSFAVGLVLMVGFEHIVTRVLGLLALFCFIVTGVFLIADPVALGKEEEAMHDERAP
Ga0190268_119223191	3300018466	Soil	MKLALMLGSFAVGLVLMVGFEHVVTRILGVLALFCFLVTGVFLIADPVALGKEEEDMPD
Ga0190270_104200741	3300018469	Soil	MRWLAVMLASLAVGFVLMIGFEHAITRVFGLLALFAFIVIGVFLIADPAFLAAEDEEED
Ga0190270_105622732	3300018469	Soil	MRWLAVMLASLAVGFVLMIGFEHAITRVFGLLALFAFIVIGVFLIADPAFLAAEDEEG
Ga0190270_106751972	3300018469	Soil	MKLALLFGSLAAGLVLMIGFEHVLTRVLGVLALFTFIVTGVFLIADPAFLDRDED
Ga0190270_109647442	3300018469	Soil	MRWLAVMLGCLAAGVVLMVGFESAITRVAGLLALFAFIVIGVFLIADPAFLAAEDEED
Ga0190274_127641131	3300018476	Soil	MLGCLVAGLALMLVFDSAITRVLGVLALFAFIVIGVFLIADPAFLAEEDE
Ga0196958_100068332	3300020181	Soil	MKLAFMLGSFAVGLVLMVAFEHVVTRILGVLALFAFLVTGVFLIADPVALAREDEDD
Ga0222622_101192063	3300022756	Groundwater Sediment	MFGCLAVGLVLMIGFEAAITRVLGVLALFAFIVIGVFLIADPELLDPDDR
Ga0222622_101977433	3300022756	Groundwater Sediment	MRWLPVMLGCLAAGLALMLAFESWITRLLGVLALFAFIVIGVFLIADPAFLAEEDE
Ga0196962_100986192	3300024430	Soil	VKLLMFGSLVVGVVLMVAFHEPVTRIVGVAALFTFIVSGVFLIADPAFLGPEDDAAPTREPARPGSS
Ga0207662_103701432	3300025918	Switchgrass Rhizosphere	MKVALMFGSLAVGLVLMIGFEAMVTRIIGVLALFTFIITGVFLIADPAFLERDEEDA
Ga0207652_106093251	3300025921	Corn Rhizosphere	MFGSLAVGLVLMIGFDTWYTRLFGVLALFTFIVTGVFLIADPAFLEREED
Ga0207687_116366892	3300025927	Miscanthus Rhizosphere	MKVALMFGSLAVGLVLMIGFEAMLTRIVGVLALFTFIITGVFLIADPAFLERDEEDA
Ga0207686_112866372	3300025934	Miscanthus Rhizosphere	MRWLPVMLGCLGVGLALMLVFDNWITRLLGVLALFAFIVIGVFLIADPAFLAAEED
Ga0207709_109343713	3300025935	Miscanthus Rhizosphere	MFGSLAVGLVLMIGFEAMLTRIVGVLALFTFIITGVFLIADPAFLERDEEDA
Ga0207661_112463312	3300025944	Corn Rhizosphere	MKVALMFGSLAVGLVLMIGFEAMVTRIIGVLALFTFIITGVFLIADPAFLEREDD
Ga0207679_102651241	3300025945	Corn Rhizosphere	MRVVLLFACLVAGLVLMIGFDAAITRVLGVLALFAFIVLGVFLIADP
Ga0207712_117016281	3300025961	Switchgrass Rhizosphere	FGSLAVGLVLMIGFEAIVTRIIGVLALFTFIITGVFLIADPAFLERDEEDA
Ga0207703_107147532	3300026035	Switchgrass Rhizosphere	MKVALMFGSLAVGLVLMIGFEAMVTRIIGVLALFTFIMTGVFLIADPAFLERDEEAA
Ga0207683_115929172	3300026121	Miscanthus Rhizosphere	MRLALLFGSLAAGLVLMIGFEHVITRVLGVLALFTFIVTGVFLIADPAFLDRDDD
Ga0207428_100323523	3300027907	Populus Rhizosphere	MKLALLFGSLAAGLVLMIGFEHVVTRVLGVLALFTFIVTGVFLIADPAFLDRDED
Ga0268265_115003821	3300028380	Switchgrass Rhizosphere	MRLALLFGSLAAGLVLMIGFEHVLTRVLGVLALFTFIVTGVFLIADPAFLDRDDD
Ga0307321_10789821	3300028704	Soil	LMLGCLAVGLVLMLAFESAVTRLLGVLALFAFIVIGVFLIADPAFLAEEEESSS
Ga0307276_100213362	3300028705	Soil	MRAALACFALGLVLMLGFDAPVTRVLGVGLLFAFIVCGVFALAAPDRLDQEE
Ga0307291_10543072	3300028707	Soil	MRWLPVMLGCLAAGLALMLAFESWITRLLGVLALFAFIVIGVFLIADPAFLAEEEGER
Ga0307322_100604312	3300028710	Soil	MRWLPVMLGCLVVGLALMLAFESWITRLLGVLALFAFIVIGVFLIADPAFLAEEEGES
Ga0307285_100270422	3300028712	Soil	MRWLPVMLGCLVVGLALMLAFESAVTRLLGVLALFAFIVVGVFLIADPVFLAEEEEEES
Ga0307301_103277652	3300028719	Soil	MRWLPLMLGCLAVGLVLMLAFESAVTRLLGVLALFAFIVIGVFLIADPVFLTEEEES
Ga0307317_101146511	3300028720	Soil	MLGCLAAGLALMLAFESWITRLLGVLALFAFIVIGVFLIADPAFLAEEEGES
Ga0307317_101560641	3300028720	Soil	CLAAGLALMLAFESWITRLLGVLALFAFIVIGVFLIADPAFLAEEEGES
Ga0307318_100109655	3300028744	Soil	MRWLPVMLGCLVAGLALMLVFENAITRVLGVLALFAFIVIGVFLIADPAFLAEEEESSS
Ga0307318_100168873	3300028744	Soil	VACLVCLVAGVGLMVFSELAITRVLGVLALFSFVVIGVFTIADPEFLARDDES
Ga0307297_100125722	3300028754	Soil	MLGCLVVGLALMLAFESWITRLLGVLALFAFIVIGVFLIADPAFLAEEEGER
Ga0307316_100571343	3300028755	Soil	MLGCLAAGLALMLAFESWITRLLGVLALFAFIVIGVFLIADPAFLAEEEGER
Ga0307299_101196992	3300028793	Soil	MRWLPVMLGCLVVGLALMLAFESAITRLLGVIALFAFIVIGVFLIADPAFLAEEDE
Ga0307294_102880331	3300028810	Soil	RAALACFALGLVLMLGFDAPVTRVLGVGLLFAFIVCGVFALAAPDRLDQEE
Ga0307302_105128822	3300028814	Soil	VSRRLVACLVCLVAGVGLMVFSELAITRVLGVLALFSFVVIGVFTIADPEFLARDDE
Ga0307286_103862002	3300028876	Soil	MRSLPVMLGCLVVGLALMLAFESWITRLLGVLALFAFIVIGVFLIADPAFLAEEEGES
Ga0307300_101355232	3300028880	Soil	MLGCLVVGLALMLAFESWITRLLGVLALFAFIVIGVFLIAD
Ga0307277_104051261	3300028881	Soil	VVGLALMLAFESAITRLLGVIALFAFIVIGVFLIADPAFLAEEDDERVGSRRA
Ga0307277_105880582	3300028881	Soil	MRWLPVMLGCLVVGLALMLGSESAITRVLGVLALFAFIVIGVFLIADPAFLAEEDA
Ga0307304_100058591	3300028885	Soil	RWLPVMLGCLVVGLALMLAFESWITRLLGVLALFAFIVIGVFLIADPAFLAEEEGER
Ga0308201_102089212	3300031091	Soil	LALGVVLMIPFEAWFTLLAGVLALFAFIVSGVFLIAAPGLLNQGSDTE
Ga0308201_104032292	3300031091	Soil	MLGCLVVGLALMLAFESWITRLLGVLALFAFIVIGVFLIADPVFLVEEEES
Ga0299913_101505192	3300031229	Soil	MRLAIMLGSFAAGLVLMVGFDHVVTRILGVLALFAFLVTGVFLIADPVALGRDEEGMPDEHRDAP
Ga0307505_104861261	3300031455	Soil	MRWLPVMLGCLVVGLALMLAFESWITRLLGVLALFAFIVIGVFLIADPAFLAAEDDEQG
Ga0307413_102928003	3300031824	Rhizosphere	MKLAFMLGSLAVGLVLMIGFEAVLTRVVGVLALFGFIVSGVFLIADPAFLDRDDD
Ga0307410_101102032	3300031852	Rhizosphere	MKLAFMLGSLAVGLVLMIGFEAVLTRVVGVLALFAFIVSGVFLIADPAFLDRDDD
Ga0307410_106619132	3300031852	Rhizosphere	MKLALMLGSFAVGLVLMVGFEHVVTRTLGVLALFCFLVTGVFLIADPVALGKEEGDMPDERSP
Ga0307406_102953562	3300031901	Rhizosphere	MKLALMFASLAVGLVLMIGFEAPLTRIVGVLALFAFIVTGVFLIADPGFLDDDES
Ga0307406_106326002	3300031901	Rhizosphere	MRLALLFGSLAAGLVLMIGFEHVLTRILGVLALFTFIVTGVFLIADPEFLDADDDND
Ga0307412_111365761	3300031911	Rhizosphere	VRADRPAVPHMRLALLFGSLAAGLVLMIGFEHVLTRILGVLALFTFIVTGVFLIADPEFLDADDDND
Ga0308175_1023615892	3300031938	Soil	MKWLPVMLGCLGVGLALMLAFESWITRLLGVLALFAFIVIGVFLIADPAFLAEEEKES
Ga0307409_1008011862	3300031995	Rhizosphere	MFGCLVAGLVLMIGFEAVLTRVLGVLALFAFIVTGVFLIADPVALGKEEGDMPDERSP
Ga0307409_1016428642	3300031995	Rhizosphere	MKVAFMFGSLAVGLVLMIGFEAVLTRLVGVLALFAFIVTGVFLIADPAFLDADEDQGT
Ga0307409_1018056882	3300031995	Rhizosphere	MKLALMLGSFAVGLMLMVGFEHVVTRILGVLALFCFLVTGVFLIADPVALGKEEGDMPDERSP
Ga0307409_1018353792	3300031995	Rhizosphere	MKGVALMLGAFFVGLVLMVAFEHVVTRVLGLVALFVFIVTGVFLIADPRFLDEDADE
Ga0308176_117474382	3300031996	Soil	VSRRALTALMLGGGAAGLVLMFLFEATITRILGVLGLFTFIVAGVFLIADPEFLGDEEE
Ga0307416_1000545131	3300032002	Rhizosphere	AAGLVLMIGFEHVLTRVLGVLALFTFIVTGVFLIADPAFLDRDED
Ga0307414_114698392	3300032004	Rhizosphere	MKLALMLGSFAVGLVLMVGFEHVLTRILGVLALFCFLVTGVFLIADPEFLGKEEDGMRDERSP
Ga0307411_101367313	3300032005	Rhizosphere	MKLAFMLGSLAVGLVLMIGFEAVLTRVVGVLALFAFIVTGVFLIADPAFLDRDDD
Ga0307411_119943402	3300032005	Rhizosphere	MKLALMLGSFAVGLVLMVGFEHVVTRTLGVLALFCFLVTGVFLIADPVALGKEEEDMPDERAP
Ga0326721_101072042	3300032080	Soil	VKLALMLGSFAVGLVLMVVFEHPVTRILGVLALFTFLITGVFLIADPVALGQEEDGEQDIGARKG
Ga0326721_103734512	3300032080	Soil	MKALMLACLVVGLGLMLAFESALTRVLGMLALFAFIVIGVFLIADPAFLAAEEERD
Ga0326721_105304232	3300032080	Soil	MRWLAVMLASLAVGFVLMIGFEHAITRVLGLLALFAFIVIGVFLIADPAFLAAEDEED
Ga0268251_104490771	3300032159	Agave	MFGCLGAGLVLMIGFAAPVTRVLGILALFAFIVLGVFLIADPELLDSDDV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F037413

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences