Metagenome / Metatranscriptome Family F037438

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F037438
Family Type	Metagenome / Metatranscriptome
Number of Sequences	168
Average Sequence Length	45 residues
Representative Sequence	WTTDRRRALGLRKREVAEAHAARMRERCPRNADLIKVEELDAAD
Number of Associated Samples	112
Number of Associated Scaffolds	168

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	1.79 %
% of genes near scaffold ends (potentially truncated)	94.05 %
% of genes from short scaffolds (< 2000 bps)	94.05 %
Associated GOLD sequencing projects	102
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.57

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (67.262 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (38.095 % of family members)
Environment Ontology (ENVO)	Unclassified (52.976 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (58.333 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 40.28% β-sheet: 0.00% Coil/Unstructured: 59.72%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.57
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.57
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 168 Family Scaffolds
PF00155	Aminotran_1_2	3.57
PF13701	DDE_Tnp_1_4	2.98
PF06627	DUF1153	2.38
PF00498	FHA	2.38
PF13586	DDE_Tnp_1_2	1.79
PF00580	UvrD-helicase	1.79
PF02201	SWIB	1.19
PF02371	Transposase_20	1.19
PF00072	Response_reg	0.60
PF14833	NAD_binding_11	0.60
PF13610	DDE_Tnp_IS240	0.60
PF01118	Semialdhyde_dh	0.60
PF14373	Imm_superinfect	0.60
PF12625	Arabinose_bd	0.60
PF00892	EamA	0.60
PF07940	Hepar_II_III	0.60
PF06628	Catalase-rel	0.60
PF03279	Lip_A_acyltrans	0.60
PF13565	HTH_32	0.60
PF11157	DUF2937	0.60
PF01609	DDE_Tnp_1	0.60
PF03473	MOSC	0.60
PF01566	Nramp	0.60
PF00211	Guanylate_cyc	0.60
PF00296	Bac_luciferase	0.60
PF12760	Zn_Tnp_IS1595	0.60
PF16736	sCache_like	0.60
PF00866	Ring_hydroxyl_B	0.60
PF14524	Wzt_C	0.60
PF07690	MFS_1	0.60
PF07508	Recombinase	0.60
PF02639	DUF188	0.60
PF03928	HbpS-like	0.60
PF00326	Peptidase_S9	0.60
PF10518	TAT_signal	0.60

COG ID	Name	Functional Category	% Frequency in 168 Family Scaffolds
COG0210	Superfamily I DNA or RNA helicase	Replication, recombination and repair [L]	1.79
COG1074	3Ã¢â‚¬â„¢-5Ã¢â‚¬â„¢ helicase subunit RecB of the DNA repair enzyme RecBCD (exonuclease V)	Replication, recombination and repair [L]	1.79
COG3973	DNA helicase IV	Replication, recombination and repair [L]	1.79
COG3547	Transposase	Mobilome: prophages, transposons [X]	1.19
COG5531	DNA-binding SWIB/MDM2 domain	Chromatin structure and dynamics [B]	1.19
COG0753	Catalase	Inorganic ion transport and metabolism [P]	0.60
COG1560	Palmitoleoyl-ACP: Kdo2-lipid-IV acyltransferase (lipid A biosynthesis)	Lipid transport and metabolism [I]	0.60
COG1671	Uncharacterized conserved protein YaiI, UPF0178 family	Function unknown [S]	0.60
COG1914	Mn2+ or Fe2+ transporter, NRAMP family	Inorganic ion transport and metabolism [P]	0.60
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.60
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.60
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.60
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.60
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.60
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.60
COG4261	Predicted acyltransferase, LPLAT superfamily	General function prediction only [R]	0.60
COG5360	Uncharacterized conserved protein, heparinase superfamily	General function prediction only [R]	0.60
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.60
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.60
COG5517	3-phenylpropionate/cinnamic acid dioxygenase, small subunit	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.60
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.60

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.26 %
All Organisms	root	All Organisms	32.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.26 %
cellular organisms	root	All Organisms → cellular organisms	32.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.26 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	32.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.26 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	19.05 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.60 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.26 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	16.07 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.60 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.26 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	6.55 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.38 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.79 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.60 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.26 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.55 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	1.19 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	1.19 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.60 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.60 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.26 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.55 %
Magnetospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum	1.19 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	1.19 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.60 %
Acidiphilium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium	0.60 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.26 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.55 %
unclassified Magnetospirillum	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → unclassified Magnetospirillum	1.19 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	1.19 %
unclassified Acidiphilium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium → unclassified Acidiphilium	0.60 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.60 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.26 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.55 %
Magnetospirillum sp. UT-4	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → unclassified Magnetospirillum → Magnetospirillum sp. UT-4	1.19 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	1.19 %
Acidiphilium sp. AL	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium → unclassified Acidiphilium → Acidiphilium sp. AL	0.60 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.60 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.60 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2070309004\|prs_FIHLEPW02RAWL8	Not Available	503	Open in IMG/M
3300001182\|JGI12668J13544_1007509	Not Available	590	Open in IMG/M
3300001652\|JGI20274J16320_100002	All Organisms → cellular organisms → Bacteria	4667	Open in IMG/M
3300002954\|JGI20281J44786_100320	Not Available	1049	Open in IMG/M
3300004629\|Ga0008092_10003766	All Organisms → cellular organisms → Bacteria	1455	Open in IMG/M
3300004633\|Ga0066395_10968544	Not Available	518	Open in IMG/M
3300005332\|Ga0066388_105103810	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300005610\|Ga0070763_10564965	Not Available	656	Open in IMG/M
3300005764\|Ga0066903_103075165	Not Available	903	Open in IMG/M
3300005764\|Ga0066903_105229493	Not Available	686	Open in IMG/M
3300005764\|Ga0066903_107990324	Not Available	543	Open in IMG/M
3300005764\|Ga0066903_108688589	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → unclassified Magnetospirillum → Magnetospirillum sp. UT-4	516	Open in IMG/M
3300006028\|Ga0070717_10993934	Not Available	764	Open in IMG/M
3300006163\|Ga0070715_10875581	Not Available	551	Open in IMG/M
3300006953\|Ga0074063_14259956	All Organisms → cellular organisms → Bacteria	1033	Open in IMG/M
3300009012\|Ga0066710_101005947	All Organisms → cellular organisms → Bacteria	1287	Open in IMG/M
3300009012\|Ga0066710_103602133	Not Available	584	Open in IMG/M
3300009088\|Ga0099830_11847834	Not Available	505	Open in IMG/M
3300009143\|Ga0099792_10058672	Not Available	1902	Open in IMG/M
3300009162\|Ga0075423_10935829	All Organisms → cellular organisms → Bacteria → Proteobacteria	919	Open in IMG/M
3300009162\|Ga0075423_12780660	Not Available	536	Open in IMG/M
3300009792\|Ga0126374_10630584	Not Available	796	Open in IMG/M
3300010046\|Ga0126384_11893881	Not Available	568	Open in IMG/M
3300010048\|Ga0126373_10299887	Not Available	1602	Open in IMG/M
3300010048\|Ga0126373_12698410	Not Available	554	Open in IMG/M
3300010358\|Ga0126370_10344157	Not Available	1202	Open in IMG/M
3300010359\|Ga0126376_11951072	Not Available	628	Open in IMG/M
3300010361\|Ga0126378_10314996	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1670	Open in IMG/M
3300010361\|Ga0126378_11417621	Not Available	787	Open in IMG/M
3300010361\|Ga0126378_11534195	Not Available	756	Open in IMG/M
3300010361\|Ga0126378_12464877	Not Available	594	Open in IMG/M
3300010366\|Ga0126379_10992096	Not Available	944	Open in IMG/M
3300010376\|Ga0126381_100156618	All Organisms → cellular organisms → Bacteria	2998	Open in IMG/M
3300010376\|Ga0126381_102505905	Not Available	739	Open in IMG/M
3300010398\|Ga0126383_10303594	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1595	Open in IMG/M
3300010398\|Ga0126383_13683581	Not Available	501	Open in IMG/M
3300010868\|Ga0124844_1128498	Not Available	966	Open in IMG/M
3300010868\|Ga0124844_1128753	Not Available	965	Open in IMG/M
3300010868\|Ga0124844_1156125	Not Available	860	Open in IMG/M
3300012362\|Ga0137361_11364826	Not Available	632	Open in IMG/M
3300012469\|Ga0150984_111037536	Not Available	683	Open in IMG/M
3300012927\|Ga0137416_10667331	Not Available	911	Open in IMG/M
3300012929\|Ga0137404_11605595	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	603	Open in IMG/M
3300012960\|Ga0164301_10601482	Not Available	812	Open in IMG/M
3300012971\|Ga0126369_12595776	Not Available	591	Open in IMG/M
3300012971\|Ga0126369_13130173	Not Available	542	Open in IMG/M
3300012971\|Ga0126369_13700429	Not Available	501	Open in IMG/M
3300016270\|Ga0182036_11267698	Not Available	614	Open in IMG/M
3300016294\|Ga0182041_12172505	Not Available	518	Open in IMG/M
3300016319\|Ga0182033_10334653	Not Available	1261	Open in IMG/M
3300016319\|Ga0182033_11370676	Not Available	636	Open in IMG/M
3300016341\|Ga0182035_10266885	Not Available	1389	Open in IMG/M
3300016341\|Ga0182035_11445954	Not Available	618	Open in IMG/M
3300016341\|Ga0182035_12132462	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300016357\|Ga0182032_10022279	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3716	Open in IMG/M
3300016357\|Ga0182032_10307027	Not Available	1255	Open in IMG/M
3300016357\|Ga0182032_10606250	Not Available	911	Open in IMG/M
3300016357\|Ga0182032_11315366	Not Available	624	Open in IMG/M
3300016357\|Ga0182032_12028275	Not Available	505	Open in IMG/M
3300016371\|Ga0182034_10686335	Not Available	870	Open in IMG/M
3300016404\|Ga0182037_11252698	All Organisms → cellular organisms → Bacteria	653	Open in IMG/M
3300016445\|Ga0182038_11630150	Not Available	581	Open in IMG/M
3300018433\|Ga0066667_11150967	Not Available	673	Open in IMG/M
3300018468\|Ga0066662_11651993	Not Available	669	Open in IMG/M
3300020580\|Ga0210403_10792956	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	753	Open in IMG/M
3300020580\|Ga0210403_11260349	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300020581\|Ga0210399_10417586	All Organisms → cellular organisms → Bacteria	1118	Open in IMG/M
3300021088\|Ga0210404_10578248	Not Available	638	Open in IMG/M
3300021168\|Ga0210406_10351677	All Organisms → cellular organisms → Bacteria	1189	Open in IMG/M
3300021168\|Ga0210406_11369079	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	506	Open in IMG/M
3300021178\|Ga0210408_11136212	Not Available	599	Open in IMG/M
3300021405\|Ga0210387_11075249	All Organisms → cellular organisms → Bacteria → Proteobacteria	702	Open in IMG/M
3300021406\|Ga0210386_10879814	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	767	Open in IMG/M
3300021479\|Ga0210410_11328433	Not Available	611	Open in IMG/M
3300021479\|Ga0210410_11508172	Not Available	565	Open in IMG/M
3300021560\|Ga0126371_10213663	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2030	Open in IMG/M
3300021560\|Ga0126371_10371857	Not Available	1567	Open in IMG/M
3300021560\|Ga0126371_10673825	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1183	Open in IMG/M
3300021560\|Ga0126371_10678361	Not Available	1179	Open in IMG/M
3300022532\|Ga0242655_10261780	Not Available	551	Open in IMG/M
3300022717\|Ga0242661_1017918	All Organisms → cellular organisms → Bacteria	1110	Open in IMG/M
3300025910\|Ga0207684_10941276	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	725	Open in IMG/M
3300026979\|Ga0207817_1020006	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	724	Open in IMG/M
3300026998\|Ga0208369_1028937	Not Available	547	Open in IMG/M
3300027616\|Ga0209106_1008681	Not Available	2105	Open in IMG/M
3300027874\|Ga0209465_10529863	Not Available	587	Open in IMG/M
3300027903\|Ga0209488_10041407	Not Available	3376	Open in IMG/M
3300027903\|Ga0209488_10067879	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2641	Open in IMG/M
3300031231\|Ga0170824_119549949	Not Available	1159	Open in IMG/M
3300031545\|Ga0318541_10151785	All Organisms → cellular organisms → Bacteria	1271	Open in IMG/M
3300031549\|Ga0318571_10040456	Not Available	1347	Open in IMG/M
3300031561\|Ga0318528_10082714	All Organisms → cellular organisms → Bacteria	1667	Open in IMG/M
3300031564\|Ga0318573_10478966	Not Available	670	Open in IMG/M
3300031572\|Ga0318515_10115711	Not Available	1414	Open in IMG/M
3300031572\|Ga0318515_10431114	All Organisms → cellular organisms → Bacteria	705	Open in IMG/M
3300031573\|Ga0310915_10006005	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6779	Open in IMG/M
3300031573\|Ga0310915_10625158	Not Available	762	Open in IMG/M
3300031573\|Ga0310915_10694333	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
3300031573\|Ga0310915_11117615	Not Available	547	Open in IMG/M
3300031640\|Ga0318555_10610310	Not Available	591	Open in IMG/M
3300031679\|Ga0318561_10165788	Not Available	1190	Open in IMG/M
3300031713\|Ga0318496_10202856	Not Available	1090	Open in IMG/M
3300031719\|Ga0306917_10074405	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2365	Open in IMG/M
3300031719\|Ga0306917_10439361	All Organisms → cellular organisms → Bacteria	1021	Open in IMG/M
3300031719\|Ga0306917_10974292	Not Available	662	Open in IMG/M
3300031723\|Ga0318493_10392858	Not Available	758	Open in IMG/M
3300031723\|Ga0318493_10585290	Not Available	621	Open in IMG/M
3300031736\|Ga0318501_10765001	Not Available	534	Open in IMG/M
3300031740\|Ga0307468_102178961	Not Available	536	Open in IMG/M
3300031744\|Ga0306918_10490605	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	961	Open in IMG/M
3300031748\|Ga0318492_10176497	All Organisms → cellular organisms → Bacteria → Proteobacteria	1086	Open in IMG/M
3300031751\|Ga0318494_10793794	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	555	Open in IMG/M
3300031763\|Ga0318537_10041887	All Organisms → cellular organisms → Bacteria → Proteobacteria	1649	Open in IMG/M
3300031769\|Ga0318526_10239551	Not Available	742	Open in IMG/M
3300031777\|Ga0318543_10093763	Not Available	1284	Open in IMG/M
3300031777\|Ga0318543_10455871	Not Available	573	Open in IMG/M
3300031792\|Ga0318529_10502805	Not Available	563	Open in IMG/M
3300031796\|Ga0318576_10145413	Not Available	1104	Open in IMG/M
3300031805\|Ga0318497_10514280	Not Available	671	Open in IMG/M
3300031832\|Ga0318499_10068517	All Organisms → cellular organisms → Bacteria → Proteobacteria	1346	Open in IMG/M
3300031833\|Ga0310917_10326665	Not Available	1039	Open in IMG/M
3300031835\|Ga0318517_10359653	Not Available	658	Open in IMG/M
3300031846\|Ga0318512_10605014	Not Available	559	Open in IMG/M
3300031879\|Ga0306919_10364293	Not Available	1105	Open in IMG/M
3300031879\|Ga0306919_10703097	Not Available	778	Open in IMG/M
3300031890\|Ga0306925_10512475	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1276	Open in IMG/M
3300031890\|Ga0306925_10714912	Not Available	1047	Open in IMG/M
3300031893\|Ga0318536_10327567	Not Available	776	Open in IMG/M
3300031894\|Ga0318522_10259038	Not Available	659	Open in IMG/M
3300031912\|Ga0306921_10746042	Not Available	1122	Open in IMG/M
3300031912\|Ga0306921_11003388	Not Available	941	Open in IMG/M
3300031941\|Ga0310912_10110000	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	2042	Open in IMG/M
3300031942\|Ga0310916_10567193	Not Available	965	Open in IMG/M
3300031946\|Ga0310910_10240955	Not Available	1412	Open in IMG/M
3300031946\|Ga0310910_10488421	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	977	Open in IMG/M
3300031947\|Ga0310909_10258521	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	1455	Open in IMG/M
3300031947\|Ga0310909_10591563	Not Available	927	Open in IMG/M
3300031954\|Ga0306926_11952036	Not Available	661	Open in IMG/M
3300031962\|Ga0307479_10468346	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1244	Open in IMG/M
3300032001\|Ga0306922_10413564	Not Available	1444	Open in IMG/M
3300032001\|Ga0306922_10583112	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1186	Open in IMG/M
3300032001\|Ga0306922_10910837	Not Available	913	Open in IMG/M
3300032001\|Ga0306922_10912913	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	911	Open in IMG/M
3300032001\|Ga0306922_11532294	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	665	Open in IMG/M
3300032035\|Ga0310911_10569028	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300032043\|Ga0318556_10270638	Not Available	887	Open in IMG/M
3300032059\|Ga0318533_10278292	Not Available	1211	Open in IMG/M
3300032059\|Ga0318533_11264027	Not Available	540	Open in IMG/M
3300032063\|Ga0318504_10444291	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300032066\|Ga0318514_10682407	Not Available	546	Open in IMG/M
3300032068\|Ga0318553_10237887	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → unclassified Magnetospirillum → Magnetospirillum sp. UT-4	951	Open in IMG/M
3300032076\|Ga0306924_10259570	Not Available	1995	Open in IMG/M
3300032076\|Ga0306924_10297276	Not Available	1853	Open in IMG/M
3300032076\|Ga0306924_10400918	Not Available	1570	Open in IMG/M
3300032076\|Ga0306924_11288937	Not Available	785	Open in IMG/M
3300032076\|Ga0306924_11542931	Not Available	702	Open in IMG/M
3300032091\|Ga0318577_10544576	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	552	Open in IMG/M
3300032094\|Ga0318540_10350604	Not Available	713	Open in IMG/M
3300032180\|Ga0307471_101261859	Not Available	902	Open in IMG/M
3300032205\|Ga0307472_100154761	All Organisms → cellular organisms → Bacteria	1681	Open in IMG/M
3300032205\|Ga0307472_100905646	Not Available	817	Open in IMG/M
3300032261\|Ga0306920_103633073	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300032261\|Ga0306920_103643317	Not Available	566	Open in IMG/M
3300033289\|Ga0310914_10605719	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	988	Open in IMG/M
3300033289\|Ga0310914_10843615	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium → unclassified Acidiphilium → Acidiphilium sp. AL	815	Open in IMG/M
3300033289\|Ga0310914_10931122	Not Available	768	Open in IMG/M
3300033289\|Ga0310914_11197764	Not Available	661	Open in IMG/M
3300033290\|Ga0318519_10464160	Not Available	760	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.21%
Host-Associated	Host-Associated	1.79%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.21%
Plants	Host-Associated → Plants	1.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	98.21%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	86.31%
Loam	Environmental → Terrestrial → Soil → Loam	11.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.19%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.60%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	64.29%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.45%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.12%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.38%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.79%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	1.19%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.19%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.60%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	38.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	22.62%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	13.10%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.55%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.17%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.98%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.98%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.38%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.79%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.19%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.60%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.60%
Green-Waste Compost	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Green-Waste Compost	0.60%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.60%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.60%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.60%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2070309004	Green-waste compost microbial communities at University of California, Davis, USA, from solid state bioreactor - Luquillo Rain Forest, Puerto Rico	Environmental	Open in IMG/M
3300001182	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2	Environmental	Open in IMG/M
3300001652	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF040	Environmental	Open in IMG/M
3300002954	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF047	Environmental	Open in IMG/M
3300004629	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome P72I A01 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022532	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022717	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026979	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 13 (SPAdes)	Environmental	Open in IMG/M
3300026998	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF046 (SPAdes)	Environmental	Open in IMG/M
3300027616	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
prs_02751530	2070309004	Green-Waste Compost	GLRKREVAEAHAARMRERCPRNADLIKVEELDAAD
JGI12668J13544_10075091	3300001182	Forest Soil	PRPRYNGAWTTDRRRALAFRRREAAEAHAARMRDRCPRNAELINVEEIAAAN*
JGI20274J16320_1000021	3300001652	Forest Soil	DRRRALAFRRREAAEAHAARMRDRCPRNAELINVEEIAAAN*
JGI20281J44786_1003201	3300002954	Forest Soil	VVGYYNGAWTTDRRRALAFRRREAAEAHAARMRDRCPRNAELINVEEIAAAN*
Ga0008092_100037662	3300004629	Tropical Rainforest Soil	MTDRRRALDLRKREVAEAHAARMRERCPRNADLIEVEELDAAD*
Ga0066395_109685441	3300004633	Tropical Forest Soil	WTTDRRRALTLRRREAAEAHAARMRDRCPRNAELITVEEITADD*
Ga0066388_1051038102	3300005332	Tropical Forest Soil	TVVGYYDGSWTTDRRRALDLRKREVAEAHAACMRERCPRNADLIKVEELDAAD*
Ga0070763_105649652	3300005610	Soil	TTDRRRALAFRRREAAEAHAARMRDRCPRNAELINVEEIAAAN*
Ga0066903_1030751651	3300005764	Tropical Forest Soil	SWTTDRCRAVTIPKRDAAEAHAARMRDRCPRNAELIKVEETADDD*
Ga0066903_1052294931	3300005764	Tropical Forest Soil	VVGYYNGSWTTDRCRAVTIRRRDAAEAHAARLRDQCPRNADLIKVEEIAAAND*
Ga0066903_1079903242	3300005764	Tropical Forest Soil	VGCYNGSWTTDRCRAAALGKHDAAEAHAARLRDLCPRNADLIQVEEIVAAD*
Ga0066903_1086885891	3300005764	Tropical Forest Soil	GYYNGAWTTDRRRALTLRWREAAEAHAARMRERCPRNAELITVE*
Ga0070717_109939343	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	GYYNGAWTTDRRRALSLRWREAAEAHAARMRDRCPRNAELINVEEAAAAD*
Ga0070715_108755811	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	GYYNGAWTTDRHRAIALPKREVAEDHAARMRDLCPRNAELINVEEIAAAD*
Ga0074063_142599561	3300006953	Soil	WTTDRRRALTLRRREAAEVHAARMRDCCPRNADVIKVDEIAAAD*
Ga0066710_1010059471	3300009012	Grasslands Soil	RRRALTLRWREAAEADAARMRDCCPRNADLIKVEEIATADII
Ga0066710_1036021331	3300009012	Grasslands Soil	TDRRRALALRRREAAEAHAARMRGCCPRNADLIKVEEIAAAD
Ga0099830_118478341	3300009088	Vadose Zone Soil	WTTDRRRALAFRRREAAEAHAARMRDHCPRNAELINVEEIAAAD*
Ga0099792_100586721	3300009143	Vadose Zone Soil	ALAFRRREAAEAHAARMRDRCPRNAELINVEAVAAAN*
Ga0075423_109358292	3300009162	Populus Rhizosphere	SAGLGRRRALRLPKRDMAEPQAARLRECCPRNTDLIKVEELEAAD*
Ga0075423_127806601	3300009162	Populus Rhizosphere	VVGYYNGCWTTDPCRAVILHSREEAETHAARMRDRCPHNADLIKVEELAAAD*
Ga0126374_106305841	3300009792	Tropical Forest Soil	AVVGYYDGSWTTDRLRAVALRKREAAEAHAARLRQRCPRNADLIKIEELEAD*
Ga0126384_118938811	3300010046	Tropical Forest Soil	TDRRRALALRKRDAAEAHAARMRERCPRNADLIKVEELEAAD*
Ga0126373_102998876	3300010048	Tropical Forest Soil	GSWTTDRCRAVTIPKRDAAEAHAARMRDRCPRNAELIKVEETADDD*
Ga0126373_126984102	3300010048	Tropical Forest Soil	RRALTLRWREAAEAHAARMRDCCPRNAELITVEEITTGD*
Ga0126370_103441571	3300010358	Tropical Forest Soil	GSWTTDRCRAVTIPKRDAAEAHAARMRDRCPRNAELIKVEESAADD*
Ga0126376_119510722	3300010359	Tropical Forest Soil	YYSGSWTTDRWRAVTIWKCDAAEAHAARLRDQCPRNSDLIKVEEIAAADD*
Ga0126378_103149961	3300010361	Tropical Forest Soil	RRALELRKREMAEAHAVRMRERCPRNADLIKVEELDAAD*
Ga0126378_114176211	3300010361	Tropical Forest Soil	RAVTLRKREAAEAHAARMRDRCPRSADLIKGEELAAGD*
Ga0126378_115341952	3300010361	Tropical Forest Soil	YDGSWTTDRRRALDLRKREVAEAHAACMRERCPRNADLIKVEELDAAD*
Ga0126378_124648771	3300010361	Tropical Forest Soil	WTTDRRRAVALRKRDVAEAHADRLRKRCPRNADLIKVESWTPPTS*
Ga0126379_109920963	3300010366	Tropical Forest Soil	GYYDGSWTTDRRRALVHRKREVAEAHAARMRERCPRNAELIKVEELDAAD*
Ga0126381_1001566181	3300010376	Tropical Forest Soil	YYDGSWTTDRRRALDLRKREVAEAHAARLRERCPRNADLIKVEELDAAD*
Ga0126381_1025059053	3300010376	Tropical Forest Soil	LDLWKREVAEAHAARMRERCPRNADLIKVEELDAAD*
Ga0126383_103035943	3300010398	Tropical Forest Soil	LRKREVAETHAARLRELSPRNADLIKVEESDAAD*
Ga0126383_136835811	3300010398	Tropical Forest Soil	ALTLRWREAAEAHAARMRDRCPRNAELITVEEIAAGD*
Ga0124844_11284982	3300010868	Tropical Forest Soil	LDTNGAWTTDRRRALTLRWREAAEAHAARMRDRCPRNAELITVEEIAAGD*
Ga0124844_11287532	3300010868	Tropical Forest Soil	DTNGAWTTDRRRALTLRWREAAEAHAARMRDRCPRNAELITVEEIAAGD*
Ga0124844_11561253	3300010868	Tropical Forest Soil	TNGAWTTDRRRALTLRWREAAEAHAARMRDRCPRNAELITVEEIAAGD*
Ga0137361_113648261	3300012362	Vadose Zone Soil	WTTDRRRALTVRRREAAEAHAARMRDCCPRNADVIKVEEIAAAD*
Ga0150984_1110375363	3300012469	Avena Fatua Rhizosphere	TDRHRAIALPKREVAEDHAARMRDLCPRNAGLINVEEIAAATST*
Ga0137416_106673312	3300012927	Vadose Zone Soil	QTVVGYYNGAWTTDQRRALTLRWREAAEAHAARLRERCPRNADVIKVEEIAAAD*
Ga0137404_116055952	3300012929	Vadose Zone Soil	TVVGYYDGAWTTDRHRALTLRWREAVEAHAARMRDRCPRNADVIKVEEIASAD*
Ga0164301_106014822	3300012960	Soil	GYYNGAWTTDRRRALAFRRREAAEAHAARMRDRCPRNAELINVEEIAAAN*
Ga0126369_125957761	3300012971	Tropical Forest Soil	VGYYNGSWTTDRYRAAALRKRDTAEAHAARLRDLCPRNADLIQVEEIAAAD*
Ga0126369_131301732	3300012971	Tropical Forest Soil	WTTDRCRAVALPEREVAEAHADCMRERCPRNADLITVEELEAAD*
Ga0126369_137004292	3300012971	Tropical Forest Soil	LRKRDVAEAHADRLRKRCPRNADLIKVEELDAAD*
Ga0182036_112676981	3300016270	Soil	YYDGSWTTDRRRALDLRKREVAEAHAASMRERCPRNADLIKVEELDAAD
Ga0182041_121725051	3300016294	Soil	GYYNGSWTTDRCRAATIRKRDAAEAHAARLRDQCPRNSDLIKVEEIAAADD
Ga0182033_103346534	3300016319	Soil	TTDRRRALGLRKREVAEAHAACMRERCPRNADLIKVEELDAAD
Ga0182033_113706761	3300016319	Soil	TDRCRAVTIRKRDAAEAHAARLRDQCPRNSDLIKVEEIAAADD
Ga0182035_102668851	3300016341	Soil	NGTWTTDRCRALTIRRREVAEADAARMRDRCPRNADLIKIEKFAAAD
Ga0182035_114459541	3300016341	Soil	SWTTDRRRALGLRKREVAEAHAACMRERCPRNADLIKVEELDAAD
Ga0182035_121324622	3300016341	Soil	YYDGSWTTDRRRALDLRKREVAEAHAARMRERCPRNSDLIKVEELDAAD
Ga0182032_100222791	3300016357	Soil	TWTTDPRRALTLRWREAAEAQAARMRDRCPRNAKLIAVEEIAAAD
Ga0182032_103070272	3300016357	Soil	DGSWTTDRRRALGLRKREVAEAHAACMRERCPRNADLIKVEELDAAD
Ga0182032_106062503	3300016357	Soil	VGYYNGAWTTDQRRALTLRKRETAEAQAVRMRDRCPRNAELIAVEETAADD
Ga0182032_113153661	3300016357	Soil	RRRALDLRKRELAEAHAARMRERCPRNADLIKVEELDAAD
Ga0182032_120282751	3300016357	Soil	LRKREVAEVHAARMRERCPRNADLIKVEELDAADEL
Ga0182034_106863351	3300016371	Soil	VGYYDGSWTTDRRRALDLRKREVAEAHAACMRERCPRNADLIKVEELDAAD
Ga0182037_112526982	3300016404	Soil	WTTDRRRALDLRKREVAEAHAACMRERCPRNADLIKVEELDAAD
Ga0182038_116301502	3300016445	Soil	RALGLRRREVAEVHAARMRERCPRNADLIKVEELDAAD
Ga0066667_111509671	3300018433	Grasslands Soil	TVVGYYDGAWTTDRRRALTLRWREAAEAHAARMRGCCPRNADLIKVEEIAAAD
Ga0066662_116519931	3300018468	Grasslands Soil	NGAWTTDQRRALAFRRREAAEAHAARMRDRCPRNAELINVEAVVAAN
Ga0210403_107929563	3300020580	Soil	VGYFNGAWTTDRRRALAFRRREAAEAHAARMRDRCPRNAELINVEEIAVAN
Ga0210403_112603491	3300020580	Soil	FNGAWTTDQRRAMALRRREAEAHAARLRDCCPRNAEFINVEEIAVAD
Ga0210399_104175861	3300020581	Soil	TTDGRRALTLPERKAAEAHAARMRDRCPRNADLIKVEEFAAAD
Ga0210404_105782481	3300021088	Soil	SWTTDRCRAVTVDKRDAAEDHAARMRSQCPRNAELIKVEEIAADD
Ga0210406_103516772	3300021168	Soil	QTVVGYYDGSWTTDRRRALGLRKREVAEAHAACMRERCPRNADLIKVEELDAAD
Ga0210406_113690793	3300021168	Soil	VVGYFNGAWTTDRRRALAFRRREAAEAHAARMRDRCPRNAELINVEEIAVAN
Ga0210408_111362121	3300021178	Soil	TDRWRAVTVDKRDAAEDHAARMRSQCPRNAELIKVEEIAAADD
Ga0210387_110752491	3300021405	Soil	WTTDRCRAVTVDKRDAAEDHAARMRSQCPRNAELIKVEEIAADD
Ga0210386_108798142	3300021406	Soil	NGAWTTDRHRAIAVPKREAAEDHAARMRDLCPRNAELINVEEIAAD
Ga0210410_113284331	3300021479	Soil	QRRAMALHRCEAEDHAARLRDCCPRNAELINVEEIAAAD
Ga0210410_115081721	3300021479	Soil	TTDRRRALTLRRREAAEAHAARMRDCCPRNADVIKVEEMAAAD
Ga0126371_102136633	3300021560	Tropical Forest Soil	VGCYNGSWTTDRCRAAALGKHDAAEAHAARLRDLCPRNADLIQVEEIVAAD
Ga0126371_103718575	3300021560	Tropical Forest Soil	GSWTTDRCRAVTIPKRDAAEAHAARMRDRCPRNAELIKVEETADDD
Ga0126371_106738251	3300021560	Tropical Forest Soil	TVVGYYNGAWTTDRRRALTLRRREAAEAHAARMRDRCPRNAELISVEEITAAD
Ga0126371_106783611	3300021560	Tropical Forest Soil	YYNGAWTTDRQRAVTLRERDADEAHDAIMRDRCPGNADLIEVEELAVAD
Ga0242655_102617801	3300022532	Soil	IALPKREVAEDHAARMRDLCPRNGELINVEEIAAAD
Ga0242661_10179182	3300022717	Soil	AIALPKREVAEDHAARMRDLCPRNAELINVEEMAAAD
Ga0207684_109412762	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	LALRRREAAEAHAARLRDRCPRNADVINVEEAAAAD
Ga0207817_10200063	3300026979	Tropical Forest Soil	ALDLRKREVAEAHAARMRERCPRNADLIKVEELDAAD
Ga0208369_10289372	3300026998	Forest Soil	FNGAWTTDQRRAMALHRCEAEDHAARLRDCCPRNAELINVEEIAAAD
Ga0209106_10086812	3300027616	Forest Soil	ALAFRRREAAEAHAARMRDRCPRNAELINVEAVAAAN
Ga0209465_105298631	3300027874	Tropical Forest Soil	AWTTDRRRALTLRRREAAEAHAARMRDRCPRNAELITVEEITADD
Ga0209488_100414074	3300027903	Vadose Zone Soil	YNGAWTTDRRRALAFRRREAAEAHAARMRDRCPRNAELINVEEIAIAD
Ga0209488_100678791	3300027903	Vadose Zone Soil	WTTDQRRALTLRRREAAEAHAARMRDCCPRNADVIKVEEIAAAD
Ga0170824_1195499491	3300031231	Forest Soil	TTDRRRALTLRWREAAEAHAARMRDRCPRNAELITVEEIAAAD
Ga0318541_101517853	3300031545	Soil	GSWTTDRRRALGLRKREVAEAHAACMRERCPRTADLIKVEELDAAD
Ga0318571_100404561	3300031549	Soil	ALALRKREVAEAHAARLRERCPRNADCIKVEELEAAD
Ga0318528_100827141	3300031561	Soil	GAWTTDQRRALTIRRRDAAEAHAARMRDRCPRNAELIIVEETSADD
Ga0318573_104789661	3300031564	Soil	LGLRKREVAEAHAARMRERCPRNADLIKVEELDAAD
Ga0318515_101157111	3300031572	Soil	LTIRRRDAAEAHAARMRDRCPRNAELIIVEEISADD
Ga0318515_104311141	3300031572	Soil	DLRKREVAEAHATRMRERCPRNADLIKVEQLDAAD
Ga0310915_1000600510	3300031573	Soil	VIARKTVVGYYDGSWTTDRRRALDLRKREVAEAHAACMRERCPRNADLIKVEELDAAD
Ga0310915_106251582	3300031573	Soil	WTTDRRRALGLRKREVAEAHAACMRERCPRNADLIKVEELDAAD
Ga0310915_106943331	3300031573	Soil	TVVGYYDGSWTTDRRRALDLRKREVAEAHATRMRERCPRNADLIKVEQLDAAD
Ga0310915_111176152	3300031573	Soil	GRALALRKREAAEAHAARLRERCPRNADCIKVEELEAAD
Ga0318555_106103101	3300031640	Soil	GYYDGSWTTDGRRALALRKREAAEAHADRLRERCPRNADLIKVEELDAAD
Ga0318561_101657881	3300031679	Soil	ALAVHRREAVEAHAARMRDRSPRDADLIKVEQIAAAD
Ga0318496_102028561	3300031713	Soil	LTIRRRDAAEAHAARMRDRCPRNAELIIVEETSADD
Ga0306917_100744051	3300031719	Soil	DRRRALDLRKRELAEAHAARMRERCPRNADLIKVEELDAAD
Ga0306917_104393611	3300031719	Soil	WTTDRRRALGLRKREVAEAHAARMRERCPRNADLIKVEELDAAD
Ga0306917_109742921	3300031719	Soil	LGLRKREVAEAHAACMRERCPRNADLIKVEELDAAD
Ga0318493_103928581	3300031723	Soil	YDGSWTTDRRRALGLRKREVAEAHAACMRERCPRNADLIKVEELDAAD
Ga0318493_105852901	3300031723	Soil	RDPNVLGYYNGSWTTDRCRALDLRKREVAEAHAARMRECCPRNADLIKVEELDAAD
Ga0318501_107650011	3300031736	Soil	YNGAWTKDRRRALTLRWREAAEAHAARMRDRCPRNAELITVEEIAAAD
Ga0307468_1021789611	3300031740	Hardwood Forest Soil	MTAPWTTDRRRALTLRWREAAEAHAARMRDRCPRNADVIKVDEIAAAD
Ga0306918_104906052	3300031744	Soil	VIARKTVVGYYDGSWTTDRRRALDLRKREVAEAHAACMRERCPRNADLIKVEELDD
Ga0318492_101764972	3300031748	Soil	VVGYYDGAWTTDRRRALTLRWREAAEAHAARMRDRCPRNAELITVEEIAATD
Ga0318494_107937942	3300031751	Soil	QTVVGYYNGTWTTDRRRALTLRWREAAEAQAARMRDRCPRNAKLIAVEEIAAAD
Ga0318537_100418871	3300031763	Soil	VGYYNGAWTTDQHRALTLRRREAAEDHAARMRDRCPRNAELTTVEEIPAAD
Ga0318526_102395511	3300031769	Soil	YNGAWTTDRRRALAVHRREAVEAHAARMRDRSPRDADLIKVEQIAAAD
Ga0318543_100937633	3300031777	Soil	YNGAWTRDQRRALTLRRRETAEAHAARIRDRCPRNAELIVVEEIAAAD
Ga0318543_104558712	3300031777	Soil	RRALDLRKRELAEAHAARMRERCPRNADLIKVEELDAAD
Ga0318529_105028051	3300031792	Soil	GYYNGAWTTDRRRALTLRWREAAEAHAARMRDRCPRNAELITVEEIAAAD
Ga0318576_101454132	3300031796	Soil	VVGYYNGAWTTDRRRALAVHRREAVEAHAARMRDRSPRDADLIKVEQIAAAD
Ga0318497_105142801	3300031805	Soil	GSWTTDRRRALDLRKREVAEVHAARMRERCPRNADLIKVEELDAAD
Ga0318499_100685172	3300031832	Soil	DGAWTTDRRRALTLRWREAAEAHAARMRDRCPRNAELITVEEIAATD
Ga0310917_103266651	3300031833	Soil	YDGSWTTDRRRALGLRKREVAEAHAARMRERCPRNADLIKVEELDAAD
Ga0318517_103596531	3300031835	Soil	GYYDGSWTTDRGRALSLRKREVAEAHAARLRERCPRNADCIKVEELEAAD
Ga0318512_106050142	3300031846	Soil	TQTVVGYYDGSWTTDRRRALDLRKREVAEAHAACMRERCPRNADLIKVEELDAAD
Ga0306919_103642932	3300031879	Soil	GYYNGAWTTDPCRAVILRSREEAETHASRMRDRCPHNAELITVEEIAAVD
Ga0306919_107030972	3300031879	Soil	DRCRALDLRKREVAEAHAARMRECCPRNADLIKVEELDAAD
Ga0306925_105124751	3300031890	Soil	RALGLRKREVAEAHAACMRERCPRNADLIKVEKLDAAD
Ga0306925_107149121	3300031890	Soil	MQTVVGYYDGSWTTDPRRALALRKRDVAEAHAARMRKRCPRNADLIKVEKPPTSSTPP
Ga0318536_103275671	3300031893	Soil	YNGSWTTDRCRALDLRKREVAEAHAARMRECCPRNADLIKVEELDAAD
Ga0318522_102590381	3300031894	Soil	IRRRDAAEAHAARMRDRCPRNAELIIVEEISADDG
Ga0306921_107460424	3300031912	Soil	MQTVVGYYDGSWTTDPRRALALRKRDVAEAHAARMRKRCPRNADLIKVEELEAAD
Ga0306921_110033881	3300031912	Soil	TVVGYYNGAWTTDQRRALTIRRRDAAEAHAARMRDRCPRNAELIIVEETSADD
Ga0310912_101100001	3300031941	Soil	RCRALDLRKREVAEAHAARMRECCPRNADLIKVEELDAAD
Ga0310916_105671932	3300031942	Soil	SWTTDPRRALALRKRDVAEAHAARMRKRCPRNADLIKVEELEAAD
Ga0310910_102409552	3300031946	Soil	GSWTTDRRRALGLRKREVAEAHAACMRERCPRNADLIKVEELDAAD
Ga0310910_104884212	3300031946	Soil	ALTLRWREAAEAQAARMRDRCPRNAKLIAVEEIAAAD
Ga0310909_102585213	3300031947	Soil	LDLRKREVAEAHAARMRECCPRNADLIKVEELDAAD
Ga0310909_105915631	3300031947	Soil	YYNGAWTTDPCRAVILRSREEAETHASRMRDRCPHNAELITVEEIAAVD
Ga0306926_119520361	3300031954	Soil	WTTDRCRAVTIRKCDAAEAHAARLRDQCPRNSDLIKVEEIAAADD
Ga0307479_104683462	3300031962	Hardwood Forest Soil	GYYNGTWTTDGDRAITLRERMAAENHAARMRDRCPRNADLIKVEEFAAAD
Ga0306922_104135641	3300032001	Soil	DGSWTTDRRRALDLRKRELAEAHAARMRERCPRNADLIKVEELDAAD
Ga0306922_105831123	3300032001	Soil	RRALGLRKREVAEAHAARMRERCPRNADLIKVEELDAAD
Ga0306922_109108372	3300032001	Soil	TTDRRRALELRKHEMADAHAARMRGRCPRNADLIKVEAMPTSSKSRN
Ga0306922_109129131	3300032001	Soil	RRALTTRKREAAEARAALMRDRCPRNAELITVEEIPADD
Ga0306922_115322942	3300032001	Soil	TVVGYYDGTWTTDRRRALDLRKREVAEAHAARMRERCPRNADLINVEELDAAD
Ga0310911_105690282	3300032035	Soil	GYYDGCWTTDRRRALDLRKREVAEAHAACMRERCPRNADLIKVEELDAAD
Ga0318556_102706381	3300032043	Soil	TIRRRDAAEAHAARMRDRCPRNAELIIVEETSADD
Ga0318533_102782922	3300032059	Soil	RRALGLRKREVAEAHAACMRERCPRNADLIKVEELDAAD
Ga0318533_112640273	3300032059	Soil	YDGSWTTDPRRALALRKRDVAEAHAARMRKRCPRNADLIKVEELEAAD
Ga0318504_104442911	3300032063	Soil	ALDLRKREVAEAHAACMRERCPRNADLIKVEELDAAD
Ga0318514_106824071	3300032066	Soil	DGSWTTDRRRALDLRKREVAEAHAVRMRERCPRNADLIKVEELDAAD
Ga0318553_102378873	3300032068	Soil	RGPAQTTDQRRAFTLRRREAAEAHATRMRDRCPRNAELITVEKIAAAD
Ga0306924_102595701	3300032076	Soil	GLRKREVAEVHAARMRERCPRNADLIKVEKLDAAD
Ga0306924_102972763	3300032076	Soil	SWTTDRCRAVTIRKRDAAEAHAARLRDQCPRNSDLIKVEEIAAADD
Ga0306924_104009184	3300032076	Soil	NGSWTTDRCRALDLRKREVAEAHAARMRECCPRNADLIKVEELDAAD
Ga0306924_112889371	3300032076	Soil	RALDLRKREVAEAHAVRMRERCPRNADLIKVEELDAAD
Ga0306924_115429312	3300032076	Soil	GSWTTDRRRALDLRKREVAEVHAARMRERCPRNADLIKVEELDAADEL
Ga0318577_105445761	3300032091	Soil	GTWTTDRRRALTLRWREAAEAQAARMRDRCPRNAKLIAVEEIAAAD
Ga0318540_103506042	3300032094	Soil	RLSDQVSANTYDGSWTTDRRRALDLRKREVAEAHAVRMRERCPRNADLIKVEELDAAD
Ga0307471_1012618591	3300032180	Hardwood Forest Soil	TVVGYYNGSWTTDRCRAVTVDKRDAAEDHAARMRSQCPRNAELIKVEEIAAADD
Ga0307472_1001547612	3300032205	Hardwood Forest Soil	YDGAWTTDRRRALTLRRREAAEAHAARMRDCCPRNADVIKVDEILAAD
Ga0307472_1009056461	3300032205	Hardwood Forest Soil	VGYYNGAWTTDRRRALTLRWREAAEAHAARMRDRCPRNAELITVEEIAAAD
Ga0306920_1036330731	3300032261	Soil	RRAFDLRKREVAEVHAARMRERCPRNADLIKVEELDAAD
Ga0306920_1036433172	3300032261	Soil	ALTIRRRDAAEAHAARMRDRCPRNAELIIVEETSADD
Ga0310914_106057191	3300033289	Soil	YDGSWTTDRRRALDLRKREVAEAHAARMRERCPRNADLIKVEELDAAD
Ga0310914_108436151	3300033289	Soil	GYYDGSWTTDRRRVLDLRKREVAEAHAARMRERCPRNADLIKVEELDAAD
Ga0310914_109311224	3300033289	Soil	TLRRREAAEDHAARMRDRCPRNAELITVEEIPAAD
Ga0310914_111977641	3300033289	Soil	VVGYYNGAWTTDPCRAVILRSREEAETHASRMRDRCPHNAELITVEEIAAVD
Ga0318519_104641602	3300033290	Soil	RALTLRRRETAEAHAARIRDRCPRNAELIVVEEIAAAD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F037438

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences