Metagenome / Metatranscriptome Family F037868

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F037868
Family Type	Metagenome / Metatranscriptome
Number of Sequences	167
Average Sequence Length	48 residues
Representative Sequence	LAQVTTPIIKLPMKIRRQCGRCGDFNSVLVEPGQAVPAFKCSACGYAAG
Number of Associated Samples	112
Number of Associated Scaffolds	167

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	97.60 %
% of genes from short scaffolds (< 2000 bps)	89.82 %
Associated GOLD sequencing projects	102
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (93.413 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (41.317 % of family members)
Environment Ontology (ENVO)	Unclassified (55.090 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.707 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 8.16% Coil/Unstructured: 91.84%
Feature Viewer

Powered by Feature Viewer

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 167 Family Scaffolds
PF00313	CSD	5.39
PF04392	ABC_sub_bind	4.19
PF13683	rve_3	3.59
PF02653	BPD_transp_2	1.80
PF13460	NAD_binding_10	1.20
PF00561	Abhydrolase_1	1.20
PF03401	TctC	0.60
PF07331	TctB	0.60
PF00140	Sigma70_r1_2	0.60
PF05362	Lon_C	0.60
PF01165	Ribosomal_S21	0.60
PF11431	Transport_MerF	0.60
PF03150	CCP_MauG	0.60
PF08388	GIIM	0.60
PF01936	NYN	0.60
PF00589	Phage_integrase	0.60
PF02668	TauD	0.60
PF00528	BPD_transp_1	0.60
PF04546	Sigma70_ner	0.60
PF12681	Glyoxalase_2	0.60
PF12838	Fer4_7	0.60
PF02482	Ribosomal_S30AE	0.60
PF01263	Aldose_epim	0.60

COG ID	Name	Functional Category	% Frequency in 167 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	4.19
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	1.20
COG0466	ATP-dependent Lon protease, bacterial type	Posttranslational modification, protein turnover, chaperones [O]	0.60
COG0676	D-hexose-6-phosphate mutarotase	Carbohydrate transport and metabolism [G]	0.60
COG0828	Ribosomal protein S21	Translation, ribosomal structure and biogenesis [J]	0.60
COG1067	Predicted ATP-dependent protease	Posttranslational modification, protein turnover, chaperones [O]	0.60
COG1432	NYN domain, predicted PIN-related RNAse, tRNA/rRNA maturation	General function prediction only [R]	0.60
COG1544	Ribosome-associated translation inhibitor RaiA	Translation, ribosomal structure and biogenesis [J]	0.60
COG1750	Predicted archaeal serine protease, S18 family	General function prediction only [R]	0.60
COG1858	Cytochrome c peroxidase	Posttranslational modification, protein turnover, chaperones [O]	0.60
COG2017	Galactose mutarotase or related enzyme	Carbohydrate transport and metabolism [G]	0.60
COG2175	Taurine dioxygenase, alpha-ketoglutarate-dependent	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.60
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.60
COG3480	Predicted secreted protein YlbL, contains PDZ domain	Signal transduction mechanisms [T]	0.60

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	94.61 %
Unclassified	root	N/A	5.39 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	94.61 %
Unclassified	root	N/A	5.39 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	93.41 %
Unclassified	root	N/A	5.39 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	1.20 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	83.23 %
Unclassified	root	N/A	5.39 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	1.20 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.60 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	79.04 %
Unclassified	root	N/A	5.39 %
Methanomada group	clade	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group	1.20 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.60 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	61.68 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8.98 %
Unclassified	root	N/A	5.39 %
Methanobacteria	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria	1.20 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.60 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	61.68 %
Unclassified	root	N/A	5.39 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.59 %
Methanobacteriales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales	1.20 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.60 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.60 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	61.68 %
Unclassified	root	N/A	5.39 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3.59 %
Methanobacteriaceae	family	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae	1.20 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.60 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.60 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	61.68 %
Unclassified	root	N/A	5.39 %
Methanobrevibacter	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter	1.20 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.60 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.60 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.60 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	61.68 %
Unclassified	root	N/A	5.39 %
Methanobrevibacter arboriphilus	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → Methanobrevibacter arboriphilus	1.20 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.60 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.60 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.60 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000580\|AF_2010_repII_A01DRAFT_1000532	Not Available	5716	Open in IMG/M
3300000956\|JGI10216J12902_112229372	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	773	Open in IMG/M
3300002245\|JGIcombinedJ26739_101462996	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	578	Open in IMG/M
3300004633\|Ga0066395_10029780	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2264	Open in IMG/M
3300004633\|Ga0066395_10056338	All Organisms → cellular organisms → Bacteria	1760	Open in IMG/M
3300004633\|Ga0066395_10189560	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1069	Open in IMG/M
3300005165\|Ga0066869_10007789	All Organisms → cellular organisms → Bacteria → Proteobacteria	1394	Open in IMG/M
3300005167\|Ga0066672_10097409	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1788	Open in IMG/M
3300005167\|Ga0066672_10889590	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	552	Open in IMG/M
3300005174\|Ga0066680_10274341	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1074	Open in IMG/M
3300005332\|Ga0066388_102067760	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1023	Open in IMG/M
3300005332\|Ga0066388_103680584	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	782	Open in IMG/M
3300005332\|Ga0066388_106203114	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300005434\|Ga0070709_10706854	All Organisms → cellular organisms → Bacteria	785	Open in IMG/M
3300005445\|Ga0070708_100643152	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	999	Open in IMG/M
3300005467\|Ga0070706_100189950	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1919	Open in IMG/M
3300005518\|Ga0070699_100470386	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1140	Open in IMG/M
3300005713\|Ga0066905_100436757	All Organisms → cellular organisms → Bacteria	1072	Open in IMG/M
3300005713\|Ga0066905_102161389	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	518	Open in IMG/M
3300005764\|Ga0066903_103540490	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	841	Open in IMG/M
3300005764\|Ga0066903_107439374	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	565	Open in IMG/M
3300005764\|Ga0066903_107727537	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	553	Open in IMG/M
3300005764\|Ga0066903_108582701	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	520	Open in IMG/M
3300006028\|Ga0070717_10283993	All Organisms → cellular organisms → Bacteria → Proteobacteria	1468	Open in IMG/M
3300006175\|Ga0070712_100027491	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3799	Open in IMG/M
3300006797\|Ga0066659_10082947	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2132	Open in IMG/M
3300006854\|Ga0075425_100757905	All Organisms → cellular organisms → Bacteria	1113	Open in IMG/M
3300006854\|Ga0075425_101772865	All Organisms → cellular organisms → Bacteria → Proteobacteria	693	Open in IMG/M
3300006871\|Ga0075434_100643596	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1078	Open in IMG/M
3300009162\|Ga0075423_12023976	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	624	Open in IMG/M
3300010043\|Ga0126380_10172087	Not Available	1416	Open in IMG/M
3300010043\|Ga0126380_10251172	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1225	Open in IMG/M
3300010047\|Ga0126382_10389161	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1083	Open in IMG/M
3300010048\|Ga0126373_10831916	All Organisms → cellular organisms → Bacteria	986	Open in IMG/M
3300010048\|Ga0126373_12909186	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	534	Open in IMG/M
3300010358\|Ga0126370_10496915	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1029	Open in IMG/M
3300010358\|Ga0126370_11008809	All Organisms → cellular organisms → Bacteria → Proteobacteria	760	Open in IMG/M
3300010359\|Ga0126376_12648773	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	550	Open in IMG/M
3300010361\|Ga0126378_11459115	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	775	Open in IMG/M
3300010362\|Ga0126377_10607518	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1139	Open in IMG/M
3300010376\|Ga0126381_102414722	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	754	Open in IMG/M
3300010376\|Ga0126381_103558612	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	611	Open in IMG/M
3300010398\|Ga0126383_10431555	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1362	Open in IMG/M
3300010398\|Ga0126383_13616375	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	505	Open in IMG/M
3300010868\|Ga0124844_1253146	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	617	Open in IMG/M
3300012200\|Ga0137382_10922611	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	629	Open in IMG/M
3300012201\|Ga0137365_10702869	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	739	Open in IMG/M
3300012202\|Ga0137363_11728541	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	518	Open in IMG/M
3300012207\|Ga0137381_11341016	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	608	Open in IMG/M
3300012359\|Ga0137385_11486876	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	541	Open in IMG/M
3300012361\|Ga0137360_11890563	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	503	Open in IMG/M
3300012582\|Ga0137358_10685633	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	685	Open in IMG/M
3300014166\|Ga0134079_10597095	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	548	Open in IMG/M
3300015359\|Ga0134085_10234638	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	796	Open in IMG/M
3300015371\|Ga0132258_13617420	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1056	Open in IMG/M
3300016270\|Ga0182036_11114032	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	654	Open in IMG/M
3300016270\|Ga0182036_11138399	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	647	Open in IMG/M
3300016270\|Ga0182036_11530920	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	560	Open in IMG/M
3300016294\|Ga0182041_11026091	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → Methanobrevibacter arboriphilus	746	Open in IMG/M
3300016294\|Ga0182041_11092727	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	724	Open in IMG/M
3300016319\|Ga0182033_10275898	All Organisms → cellular organisms → Bacteria	1377	Open in IMG/M
3300016319\|Ga0182033_11408019	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	628	Open in IMG/M
3300016357\|Ga0182032_10438809	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1063	Open in IMG/M
3300016357\|Ga0182032_11147754	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	667	Open in IMG/M
3300016371\|Ga0182034_10367673	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1172	Open in IMG/M
3300016371\|Ga0182034_10898883	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	761	Open in IMG/M
3300016387\|Ga0182040_10124447	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1795	Open in IMG/M
3300016404\|Ga0182037_10214714	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1501	Open in IMG/M
3300016445\|Ga0182038_11263036	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	659	Open in IMG/M
3300016445\|Ga0182038_12132216	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	508	Open in IMG/M
3300018482\|Ga0066669_12357404	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	509	Open in IMG/M
3300021405\|Ga0210387_10721098	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	883	Open in IMG/M
3300021405\|Ga0210387_11217995	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	653	Open in IMG/M
3300021478\|Ga0210402_10106437	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2524	Open in IMG/M
3300021560\|Ga0126371_11195050	All Organisms → cellular organisms → Bacteria	897	Open in IMG/M
3300021560\|Ga0126371_12245267	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	659	Open in IMG/M
3300021560\|Ga0126371_13340072	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	542	Open in IMG/M
3300021560\|Ga0126371_13573875	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	525	Open in IMG/M
3300025898\|Ga0207692_10688021	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	663	Open in IMG/M
3300025905\|Ga0207685_10709375	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	548	Open in IMG/M
3300025910\|Ga0207684_10058010	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3285	Open in IMG/M
3300025915\|Ga0207693_10738139	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	761	Open in IMG/M
3300026482\|Ga0257172_1002248	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2537	Open in IMG/M
3300026499\|Ga0257181_1021816	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	957	Open in IMG/M
3300026540\|Ga0209376_1402928	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	511	Open in IMG/M
3300027882\|Ga0209590_10053493	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2261	Open in IMG/M
3300028047\|Ga0209526_10081226	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2283	Open in IMG/M
3300028875\|Ga0307289_10124390	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1057	Open in IMG/M
3300030905\|Ga0308200_1106080	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	604	Open in IMG/M
3300031543\|Ga0318516_10039226	All Organisms → cellular organisms → Bacteria → Proteobacteria	2537	Open in IMG/M
3300031545\|Ga0318541_10011465	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3998	Open in IMG/M
3300031545\|Ga0318541_10149119	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1282	Open in IMG/M
3300031545\|Ga0318541_10263990	All Organisms → cellular organisms → Bacteria	957	Open in IMG/M
3300031545\|Ga0318541_10502565	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	678	Open in IMG/M
3300031546\|Ga0318538_10124422	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1348	Open in IMG/M
3300031546\|Ga0318538_10807877	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	509	Open in IMG/M
3300031549\|Ga0318571_10140778	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	826	Open in IMG/M
3300031561\|Ga0318528_10414995	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	723	Open in IMG/M
3300031573\|Ga0310915_10208891	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1366	Open in IMG/M
3300031573\|Ga0310915_10275647	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1186	Open in IMG/M
3300031573\|Ga0310915_10340981	All Organisms → cellular organisms → Bacteria	1061	Open in IMG/M
3300031573\|Ga0310915_10720994	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	703	Open in IMG/M
3300031573\|Ga0310915_11237211	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	515	Open in IMG/M
3300031679\|Ga0318561_10157450	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1221	Open in IMG/M
3300031680\|Ga0318574_10090150	All Organisms → cellular organisms → Bacteria	1685	Open in IMG/M
3300031681\|Ga0318572_10053843	Not Available	2173	Open in IMG/M
3300031682\|Ga0318560_10159607	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1195	Open in IMG/M
3300031719\|Ga0306917_10109022	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1998	Open in IMG/M
3300031719\|Ga0306917_10233010	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1405	Open in IMG/M
3300031719\|Ga0306917_10311037	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1218	Open in IMG/M
3300031724\|Ga0318500_10250098	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	859	Open in IMG/M
3300031736\|Ga0318501_10048862	All Organisms → cellular organisms → Bacteria → Proteobacteria	1968	Open in IMG/M
3300031736\|Ga0318501_10058152	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1832	Open in IMG/M
3300031736\|Ga0318501_10515793	Not Available	652	Open in IMG/M
3300031771\|Ga0318546_10239107	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1248	Open in IMG/M
3300031771\|Ga0318546_11161909	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	542	Open in IMG/M
3300031777\|Ga0318543_10138677	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1064	Open in IMG/M
3300031777\|Ga0318543_10491293	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	550	Open in IMG/M
3300031781\|Ga0318547_10391295	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	852	Open in IMG/M
3300031782\|Ga0318552_10189372	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1039	Open in IMG/M
3300031795\|Ga0318557_10335451	Not Available	694	Open in IMG/M
3300031797\|Ga0318550_10092095	All Organisms → cellular organisms → Bacteria	1420	Open in IMG/M
3300031797\|Ga0318550_10369820	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	694	Open in IMG/M
3300031799\|Ga0318565_10568810	Not Available	545	Open in IMG/M
3300031821\|Ga0318567_10430235	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	748	Open in IMG/M
3300031879\|Ga0306919_11066735	All Organisms → cellular organisms → Bacteria → Proteobacteria	616	Open in IMG/M
3300031879\|Ga0306919_11178359	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300031879\|Ga0306919_11288286	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	553	Open in IMG/M
3300031890\|Ga0306925_10341434	Not Available	1608	Open in IMG/M
3300031896\|Ga0318551_10150367	All Organisms → cellular organisms → Bacteria	1270	Open in IMG/M
3300031897\|Ga0318520_10893453	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	559	Open in IMG/M
3300031910\|Ga0306923_10048498	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4677	Open in IMG/M
3300031912\|Ga0306921_11453120	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	751	Open in IMG/M
3300031941\|Ga0310912_10591907	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	863	Open in IMG/M
3300031942\|Ga0310916_10558893	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	973	Open in IMG/M
3300031946\|Ga0310910_10478678	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	988	Open in IMG/M
3300031947\|Ga0310909_10951071	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	703	Open in IMG/M
3300031947\|Ga0310909_11024249	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	673	Open in IMG/M
3300031947\|Ga0310909_11240908	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300031954\|Ga0306926_10802343	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1134	Open in IMG/M
3300031954\|Ga0306926_10943636	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1030	Open in IMG/M
3300031962\|Ga0307479_10947871	All Organisms → cellular organisms → Bacteria	832	Open in IMG/M
3300031981\|Ga0318531_10261975	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	780	Open in IMG/M
3300032001\|Ga0306922_10042750	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	4663	Open in IMG/M
3300032001\|Ga0306922_11914928	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	580	Open in IMG/M
3300032035\|Ga0310911_10793230	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	547	Open in IMG/M
3300032042\|Ga0318545_10160013	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	801	Open in IMG/M
3300032044\|Ga0318558_10178595	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1030	Open in IMG/M
3300032051\|Ga0318532_10121787	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	923	Open in IMG/M
3300032051\|Ga0318532_10138661	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	863	Open in IMG/M
3300032052\|Ga0318506_10118866	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1142	Open in IMG/M
3300032052\|Ga0318506_10246564	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	791	Open in IMG/M
3300032055\|Ga0318575_10175006	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1073	Open in IMG/M
3300032055\|Ga0318575_10310302	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	798	Open in IMG/M
3300032059\|Ga0318533_10041933	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3016	Open in IMG/M
3300032059\|Ga0318533_10315368	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1136	Open in IMG/M
3300032059\|Ga0318533_10833969	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	676	Open in IMG/M
3300032059\|Ga0318533_10840934	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	673	Open in IMG/M
3300032068\|Ga0318553_10249320	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	928	Open in IMG/M
3300032068\|Ga0318553_10559705	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	599	Open in IMG/M
3300032089\|Ga0318525_10523985	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	606	Open in IMG/M
3300032091\|Ga0318577_10607616	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	519	Open in IMG/M
3300032094\|Ga0318540_10157177	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → Methanobrevibacter arboriphilus	1090	Open in IMG/M
3300032094\|Ga0318540_10662986	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	502	Open in IMG/M
3300033290\|Ga0318519_10402522	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	815	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.01%
Host-Associated	Host-Associated	2.99%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.01%
Plants	Host-Associated → Plants	2.99%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.01%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.40%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.60%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	82.04%
Loam	Environmental → Terrestrial → Soil → Loam	14.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.40%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.60%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	59.28%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.56%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.98%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.99%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.19%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.40%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.60%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	41.32%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.77%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	7.78%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.99%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.59%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.20%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.20%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.60%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.60%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.60%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.60%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.60%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005165	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026482	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-B	Environmental	Open in IMG/M
3300026499	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-B	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300030905	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_204 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A01DRAFT_100053210	3300000580	Forest Soil	QGIQALAQVTTPIIKLPMKIRRQCGRCGDFNSVLVQPGQAVPAFKCSACGYAAG*
JGI10216J12902_1122293721	3300000956	Soil	PIVKLPMKIRRQCGRCGDFNSVLVEPGQVVPAFKCSACGYPAE*
JGIcombinedJ26739_1014629961	3300002245	Forest Soil	AQVTTPIIKLPMKIRRQCGHCGDFNSVLVEPGQAVPAFKCLACGYAAG*
Ga0066395_100297806	3300004633	Tropical Forest Soil	ALAQVTTPIIKLPMKIRRQCGRCGDFNSVLVEPGQAVPAFKCSACGYAAGNPRSV*
Ga0066395_100563381	3300004633	Tropical Forest Soil	LAQVTTPIIKLPMKIRRQCGRCGDFNSVLVEPGQAVPAFKCSACGYAAG*
Ga0066395_101895601	3300004633	Tropical Forest Soil	AELRAQGIQALAQVTTPIIKLPMKIRRQCGRCGDFNSVLVQPGQAVPAFKCSACGYPAG*
Ga0066869_100077891	3300005165	Soil	PIIKLPMKIRRQCGRCGDFNSVLVEPGQAVPAFKCSACGHAAG*
Ga0066672_100974091	3300005167	Soil	PIIKLPMKIRRQCGRCGDFNSVLVEPGQAVPAFKCSACGYAAG*
Ga0066672_108895901	3300005167	Soil	PIIKLPMKIRRQCGRCGDFNSVLVEPGQAVPAFKCSACGYPAG*
Ga0066680_102743412	3300005174	Soil	AELRAQGIQALAQVTTPIIKLPMKIRRQCGRCGDFNSVLVEPGQAVPAFKCSACGYAAG*
Ga0066388_1020677601	3300005332	Tropical Forest Soil	IIKLPMKIRRQCGRCGDFNSVLVEPGQAVPAFKCWACGYPAG*
Ga0066388_1036805841	3300005332	Tropical Forest Soil	IIKLPMKIRRQCGRCGDFNSVLVEPGQAVPAFKCSACGYGAR*
Ga0066388_1062031142	3300005332	Tropical Forest Soil	KLPMKIRRQCGRCGDFNSVLVEPGQAVPAFKCSACGYAADRMSRLR*
Ga0070709_107068542	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	QALAQVTTPIIKLPMKIRRQCGRCGDFNSVLVEPGQAVPVFKCSACGYPAG*
Ga0070708_1006431521	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	RAQGIQALAQVTTPIIKLPMKIRRQCGRCGDFNSVLVEPGQAVPAFKCSACGYPAG*
Ga0070706_1001899503	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	IIKLPMKIRRQCGRCGDFNSVLVEPGQAVPAFKCSACGYPAG*
Ga0070699_1004703863	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	LAQVTTPIIKLPMKIRRQCGRCGDFNSVLVEPGQAVPAFKILV*
Ga0066905_1004367574	3300005713	Tropical Forest Soil	ELRAQGIQALAQVTTPIIKLPMKIRRQCGRCGDFNSVLVDPGQAVPAFKCSACGYAAG*
Ga0066905_1021613892	3300005713	Tropical Forest Soil	LRAQGIQALAQVTTPIIKLPMKIRRQCGRCGDFNSVLVEPGQAVPAFKCSACGYAAG*
Ga0066903_1035404901	3300005764	Tropical Forest Soil	PIIKLPMKIRRQCGRCGDFNSVLVEPGQAVPTFKCSACGYPAG*
Ga0066903_1074393742	3300005764	Tropical Forest Soil	LAQVTTPIIKLPMKIRRQCGRCGDFNSVLVEPGQAAPAFKCSACGYAAG*
Ga0066903_1077275372	3300005764	Tropical Forest Soil	PMKIRRQCGRCGDFNSVLVEPGQAVPAFKCSACGYAAG*
Ga0066903_1085827012	3300005764	Tropical Forest Soil	MKIKRQCGHCDRFNTVLVQPGEAVPDFKCSACGYSKARP*
Ga0070717_102839935	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	TTPIIKLPMKIRRQCGRCGDFNSVLVEPGQAVPVFKCSACGYPAG*
Ga0070712_1000274911	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	LAQVTTPIIKLPMKIRRQCGRCGDFNSVLVEPGQAVPVFKCSACGYPAG*
Ga0066659_100829476	3300006797	Soil	PIIKLPMKIRRQCGRCGDFNSVLVEPGQAVPAFKCSACSYAAG*
Ga0075425_1007579051	3300006854	Populus Rhizosphere	QVTTPIIKLPMKIRRQCGHCGDFNSVLVEPGQAVPAFKCSACGYAAR*
Ga0075425_1017728651	3300006854	Populus Rhizosphere	RAQGIQALAQVTTPIIKLPMKIRRQCGRCGDFNSVLVEPGQAVPAFKCSACGYAAG*
Ga0075434_1006435961	3300006871	Populus Rhizosphere	QVTTPIIKLPMKIRRQCGHCGDFNSVLVEPGQAVPAFKCLACGYAAG*
Ga0075423_120239761	3300009162	Populus Rhizosphere	QGIQALAQVTTPIIKLPMKIRRQCGHCGDFNSVLVEPGQAVPAFKCSACGYAAR*
Ga0126380_101720871	3300010043	Tropical Forest Soil	KLPMKIRRQCGRCGDFNSVLVEPGQAVPAFKCSACGYAAG*
Ga0126380_102511721	3300010043	Tropical Forest Soil	TPIIKLPMKIRRQCGRCGDFNSVLVEPGQAVPAFKCSACGYPAG*
Ga0126382_103891611	3300010047	Tropical Forest Soil	TPIIKLPMKIRRQCGRCGDFNSVLVEPGQAVPAFKCSACGYAAG*
Ga0126373_108319161	3300010048	Tropical Forest Soil	IKLPMKIRRQCGRCGDFNSVLVEPGQAVPAFKCSACGYAAGNPRLV*
Ga0126373_129091861	3300010048	Tropical Forest Soil	IKLPMKIRRQCGRCGDFNSVLVEPGQAVPAFKCSACGYAAG*
Ga0126370_104969151	3300010358	Tropical Forest Soil	TPIIKLPMKIRRQCGRCGDFNSVLVQPGQAVPAFKCSACGYPAG*
Ga0126370_110088091	3300010358	Tropical Forest Soil	TPIIKLPMKIRRQCGRCGDFNSVLVQPGQAVPAFKCSACGYAAG*
Ga0126376_126487731	3300010359	Tropical Forest Soil	IIKLPMKIRRQCGRCGDFNSVLVEPGQAVPAFKCSACGYAAG*
Ga0126378_114591151	3300010361	Tropical Forest Soil	LRAQGIQALAQVTTPIIKLPMKIRRQCGRCGDFNSVLVQPGQAVPAFKCSACGYPAG*
Ga0126377_106075181	3300010362	Tropical Forest Soil	KLPMKIRRQCGRCGDFNSVLVEPGQAVPAFKCSACGYPAG*
Ga0126381_1024147221	3300010376	Tropical Forest Soil	IQALAQVTTPIIKLPMKIRRQCGRCGDFNSVLVEPGQAVPAFKCSACGYPAG*
Ga0126381_1035586121	3300010376	Tropical Forest Soil	RRQCGRCGDFNSVLVEPGQAVPAFKCSACGYAAG*
Ga0126383_104315555	3300010398	Tropical Forest Soil	LAQVTTPIIKLPMKIRRQCGRCGDFNSVLVEPGQVVPAFECSACGYPAR*
Ga0126383_136163751	3300010398	Tropical Forest Soil	ELRAQGIQALAQVTTPIIKLPMKIRRQCGRCGDFNSVLVEPGQAVPAFKCSACGYAAG*
Ga0124844_12531462	3300010868	Tropical Forest Soil	LARVTTPIIKLPMKIRRQCGRCGDFNSVLVQPGQAVPAFKCSACGYPAG*
Ga0137382_109226111	3300012200	Vadose Zone Soil	VLALAQASKPVMKLPMKIKRQCARCDHFNSVLVEPGEAVPAFKCLACGYSMARP*
Ga0137365_107028691	3300012201	Vadose Zone Soil	LAQVTTPIVKLPMKIRRQCGRCGDFNSVLVEPGQVVPAFKCSACG*
Ga0137363_117285411	3300012202	Vadose Zone Soil	QALAQVTTPIIKLPMKIRRQCGRCGDFNSVLVEPGQAVPAFKCSACGYAAG*
Ga0137381_113410161	3300012207	Vadose Zone Soil	GIKALAQVTTPVTKLPMKIRRQCGRCGDFNSVLVEPGQAVPAFKCLACG*
Ga0137385_114868761	3300012359	Vadose Zone Soil	IQALAQVTTPIIKVPMKIRRQCGHCGDFNSVLAEPGHAVPAFKCLACGYAAG*
Ga0137360_118905632	3300012361	Vadose Zone Soil	PMKIRRQCGRCGDFNSVLVEPGQAVPAFKCSACGYPAG*
Ga0137358_106856332	3300012582	Vadose Zone Soil	MTKADLRAQGIKALAQVTTPIIKLPMKIRRQCGRCGDFNSVLVEPGQAVPAFKCSACGYPAG*
Ga0134079_105970951	3300014166	Grasslands Soil	PIIKLPMKIRRQCGHCGDFNSVLAEPGHAVPAFKCLACGYAAG*
Ga0134085_102346381	3300015359	Grasslands Soil	IQALAQVTTPIIKLPMKIRRQCGRCGDFNSVLVEPGQAVPAFKCSACSYAAG*
Ga0132258_136174203	3300015371	Arabidopsis Rhizosphere	AELRAQGIQALAQVTTPIIKLPMKIKRQCGRCSDFNSVLVEPGQAVPAFKCSACGYPAG*
Ga0182036_111140321	3300016270	Soil	IIKLPMKIRRQCGRCGDFNSVLVEPGQAVPAFKCSACGYAAR
Ga0182036_111383991	3300016270	Soil	IKLPMKIRRQCGRCGDFNSVLVEPGQAVPAFKCSACGYAAGNPRLV
Ga0182036_115309201	3300016270	Soil	PMKIRRQCGRCGDFNSVLVEPGQAVPAFKCSACGYAAG
Ga0182041_110260911	3300016294	Soil	IQALAQVTTPIIKLPIKIRRQCGRCGDFNSVLVQPGQAVPAFKCSACGYRAG
Ga0182041_110927271	3300016294	Soil	ELRAQGIQALAQVTTPIIKLPMKIRRQCGRCGGFNSVLVEPGQAVPAFKCSACGYPAG
Ga0182033_102758981	3300016319	Soil	PIIKLPMKIRRQCGRCGDFNSVLVEPGQAVPAFKCSACRYPAG
Ga0182033_114080191	3300016319	Soil	IIKLPMKIRRQCGRCGDFNSVLVEPGQAVPAFKCSACGYAGVKPAILV
Ga0182032_104388091	3300016357	Soil	TPIIKLPMKIRRQCGRCGDFNSVLVQPGQAVPAFKCSACGYPAG
Ga0182032_111477541	3300016357	Soil	PMKIRRQCGRCGDFNSVLVEPGQAVPAFKCSACGYAAR
Ga0182034_103676731	3300016371	Soil	LRAQGIQALAQVTTPIIKLPMKIRRQCGRCGDFNSVLVKPGQAVPAFKCSACGYPAG
Ga0182034_108988831	3300016371	Soil	QGIQALAQVTTPIIKLPMKIRRQCGRCGDFNSVLAEPGQAVPAFKCSACGYAAG
Ga0182040_101244471	3300016387	Soil	IIKLPMKIRRQCGHCGDFNSVLVEPGQAVPAFKCLACGYAAG
Ga0182037_102147141	3300016404	Soil	QGIQALAQVTTPIIKLPMKIRRQCGHCGDFNSVLVEPGQAVPAFKCLACGYAAG
Ga0182038_112630361	3300016445	Soil	AQVTTPIIKLPMKIRRQCGRCGDFNSVLVKPGQAVPAFKCSACGYPAG
Ga0182038_121322161	3300016445	Soil	KIRRQCGRCGDFNSVLVQPGQAVPAFKCSACGYPAG
Ga0066669_123574041	3300018482	Grasslands Soil	TKPIIKLPMKIKRQCGRCGDFNSVLVEPGAAAPAFKYSSCGYPAA
Ga0210387_107210981	3300021405	Soil	LAQVTTPIIKLPMKIRRQCGRCGDFNSVLVEPGQAVPAFKCSACGYPAG
Ga0210387_112179951	3300021405	Soil	TTPIIKLPMKIRRQCGRCGDFNSVLVEPGQAVPAFKCSACGYPAG
Ga0210402_101064371	3300021478	Soil	IIKLPMKIRRQCGRCGDFNSVLVEPGQAVPAFKCSACGYAAG
Ga0126371_111950501	3300021560	Tropical Forest Soil	KIRRQCGRCGDFNSVLVEPGQAVPAFKCSACGYAAG
Ga0126371_122452671	3300021560	Tropical Forest Soil	IIKLPMKIRRQCGRCGDFNSVLVEPGQAVPAFKCWACGYPAG
Ga0126371_133400722	3300021560	Tropical Forest Soil	QALAQVTTPIIKLPMKIRRQCGRCGDFNSVLVEPGQAVPAFKCSACGYPAG
Ga0126371_135738752	3300021560	Tropical Forest Soil	ALAQVTTPIIKLPMKIRRQCGRCGDFNSVLVEPGQAVPAFKCSACGYAAG
Ga0207692_106880211	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	AQVTTPIVKLPMKIRRQCGRCGDFNSVLAEPGQAVPAFKCSACGYPAG
Ga0207685_107093752	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	AQVTTPIIKLPMKVRRQCGRCGDFNSVLVEPGQAVPVFKCSACGYPAG
Ga0207684_100580101	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	AQVTTPIIKLPMKIRRQCGRCGDFNSVLVEPGQAVPAFKCSACGYPAG
Ga0207693_107381393	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	IIKLPMKIRRQCGRCGDFNSVLVEPGQAVPAFKCSACGYPAG
Ga0257172_10022481	3300026482	Soil	LAQVTTPIIKLPMKIRRQCGRCGDFNSVLVEPGQAVPAFKCLACGYAAG
Ga0257181_10218161	3300026499	Soil	QVTTPIIKLPMKIRRQCGHCGDFNSVLVEPGQAVPAFKCLACGYAAG
Ga0209376_14029281	3300026540	Soil	TTPIIKLPMKIRRQCGRCGDFNLVLVEPGQAAPAFKCSACGYSAG
Ga0209590_100534932	3300027882	Vadose Zone Soil	PMKIRRQCGRCGDFNSVLVEPGQAVPAFKCSACGYPAG
Ga0209526_100812264	3300028047	Forest Soil	IIKLPMKIRRQCGRCGDFNSVLVEPGQAVPAFKRLACGYAAG
Ga0307289_101243902	3300028875	Soil	TTPIVKLPMKIRRQCGRCGDFNSVLVEPGQAVPAFKCSACGYPAE
Ga0308200_11060801	3300030905	Soil	ELRAQGIQALAQVTTPIIKLPMKIRRQCGRCGDFNSVLVEPGQAVPAFKCSACGYPAG
Ga0318516_100392261	3300031543	Soil	IKLPMKIRRQCGRCGDFNSVLVEPGQAVPAFKCSACGYAAG
Ga0318541_100114655	3300031545	Soil	QALAQVTTPIVKLPMKIRRQCGRCGDFNSVLVQPGQAVPAFKCSACGYAAG
Ga0318541_101491191	3300031545	Soil	LIIKLPMKIRRQCGRCGDFNSVLVEPGQAVPAFKCSACGYAAG
Ga0318541_102639901	3300031545	Soil	IRRQCGRCGDFNSVLVEPGQAVPAFKCSACGYAAG
Ga0318541_105025651	3300031545	Soil	GIQALAQVTTPIIKLPMKIRRQCGRCGDFNSVRVEPGQAVPAFKCSACGYPAA
Ga0318538_101244222	3300031546	Soil	AELRAQGIQALAQVTTPIIKLPMKIRRQCGRCGGFNSVLVEPGQAVPAFKCSACGYPAG
Ga0318538_108078771	3300031546	Soil	ELRAQGIEAMAQVTTPIIKLPMKIRRQCGRCGDFNSVLVGPGQAVPAFKCSACGYAAG
Ga0318571_101407781	3300031549	Soil	IQALAQVTTPIIKLPMKIRRQCGRCGGFNSVLVEPGQAVPAFKCSACGYPAG
Ga0318528_104149951	3300031561	Soil	PIIKLPMKIRRQCGRCGDFNSVLVGPGQAVPAFKCSACGYAAG
Ga0310915_102088912	3300031573	Soil	QALAQVTTPIIKLPMKIRRQCGRCGDFNSVLVEPGQAVPAFKCSACGYAAG
Ga0310915_102756471	3300031573	Soil	RAQGIQALAQVTTPIIKLPMKIRRQCGHCGDFNSVLVEPGQAVPAFKCLACGYAAG
Ga0310915_103409811	3300031573	Soil	PIIKLPMKIRRQCGRCGDFNSVLVEPGQAVPAFKCSACGYAAR
Ga0310915_107209941	3300031573	Soil	KLPMKIRRQCGRCGDFNSVLVEPGQAVPAFKCSACGYAAG
Ga0310915_112372112	3300031573	Soil	AQGIQALAQVTTPIIKLPMKIRRQCGRCGDFNSVLVEPGQAVQAFKCSACGYAAG
Ga0318561_101574502	3300031679	Soil	LRAQGIQALAQVTTPIIKLPMKIRRQCGRCGDFNSVLVQPGQAVPAFKCSACGYPAG
Ga0318574_100901501	3300031680	Soil	TTPIIKLPMKIRRQCGRCGDFNSVLVEPGQAVPAFKCSACGYAAGNPRSV
Ga0318572_100538435	3300031681	Soil	ALAQVTTPIIKLPMKIRRQCGRCGDFNSVLVEPGQAVPAFKCSACGYAAGNPRSV
Ga0318560_101596071	3300031682	Soil	TTPIIKLPMKIRRQCGRCGDFNSVLVKPGQAVPAFKCSACGYPAG
Ga0306917_101090226	3300031719	Soil	LAQVTTPIIKLPMKIRRQCGHCGDFNSVLVEPGQAVPAFKCLACGYAAG
Ga0306917_102330102	3300031719	Soil	LAQVTPPIIKLPMKIRRQCGRCGDFNSVLVEPGQAVPAFKCSACGYAAG
Ga0306917_103110371	3300031719	Soil	TTPIIKLPMKIRRQCGRCGDFNSVLVQPGQAVPAFKCSACGYPAG
Ga0318500_102500982	3300031724	Soil	RQPPMTKTELRAQGIQALAQVTTPIIKLPMKIRRQCGRCGDFNSVLVEPGQAVPAFKCSACGYAAG
Ga0318501_100488624	3300031736	Soil	QGIQALAQVTTPIIKLPMKIRRQCGRCGDFNSVLVQPGQAVPAFKCSACGYAAG
Ga0318501_100581524	3300031736	Soil	RAQGIQALAQVTTPIIKLPMKIRRQCGRCGDFNSVLVEPGQAVPAFKCSACGYAAG
Ga0318501_105157931	3300031736	Soil	RQCGRCGDFNSVLVEPGQAVPAFKCSACGYAAGNPRLV
Ga0318521_108660821	3300031770	Soil	GELRAQGIEALAQVTTPIIKLPMKIRRQCGRCGHFNSVLVEPGQAVPTFKCSACGYAAG
Ga0318546_102391071	3300031771	Soil	LPMKIRRQCGRCGDFNSVLVEPGQAVPAFKCSACGYPAG
Ga0318546_111619092	3300031771	Soil	GTSIQALAQVTTPIIKLPMKIRRQCGRCGDFNSVLVEPGQAVPAFKCSACGYAAG
Ga0318543_101386771	3300031777	Soil	IQALAQVTTPIIKLPMKIRRQCGRCGDFNSVLVQPGQAVPAFKCSACGYPAG
Ga0318543_104912931	3300031777	Soil	AQGIQALAQVTTPIIKLPMKIRRQCGHCGDFNSVLVEPGQAVPAFKCLACGYAAG
Ga0318547_103912951	3300031781	Soil	TTPIIKLPKKIRRQCGHCGDFNSVLVEPGQAVPAFKCLACGYAAG
Ga0318552_101893721	3300031782	Soil	AELRAQGIQALAQVTTPIIKLPMKIRRQCGRCGDFNSVLVQPGQAVPAFKCSACGYPAG
Ga0318557_103354511	3300031795	Soil	MKIRRQCGRCGDFNSVLVEPGQAVPAFKCSACGYAAGNPRLV
Ga0318550_100920952	3300031797	Soil	IIKLPMKIRRQCGRCGDFNSVLVEPGQAVPAFKCSACGYAAGNPRSV
Ga0318550_103698202	3300031797	Soil	TTPIIKLPMKIRRQCGRCGDFNSVLVEPGQAVPAFKCSACGYAAG
Ga0318565_105688102	3300031799	Soil	VTTPIIKLPMKIRRQCRRCGDFNSVLVEPGQAVPAFKCSACGYPAG
Ga0318567_104302351	3300031821	Soil	IIKLPMKIRRQCGRCGDFNSVLVEPGQAVQAFKCSACGYAAG
Ga0306919_110667352	3300031879	Soil	TTPIIKLPMKIRRQCGRCGDFNSVLVQPGQAVPAFKCSACGYAAG
Ga0306919_111783591	3300031879	Soil	PMKIRRQCGCCGDFNSVLVEPGQAVPAFKCSVCGYAAG
Ga0306919_112882861	3300031879	Soil	ELRAQGIQALAQVTTPIIKLPMKIRRQCGRCGDFNSVLVEPGQAVPAFKCSACGYAAG
Ga0318544_103780241	3300031880	Soil	PGELRAQGIEALAQVTTPIIKLPMKIRRQCGRCCHFNSVLVEPGQAVPTFKCSACGYAAG
Ga0306925_103414343	3300031890	Soil	MTKTELRAQGIQALAQVTTPIIKLPMKIRRQCGRCGDFNSVLVEPGQAVPAFKCSACGYAAG
Ga0318551_101503674	3300031896	Soil	IKLPMKIRRQCGRCGDFNSVLVEPGQAVPAFKCSACGYAAR
Ga0318520_108934532	3300031897	Soil	ELRAQGIQALAQVTTPIIKLPMKIRRQCGRCGGFNSVLVEPGQAVPAFKCSACGYAAG
Ga0306923_100484981	3300031910	Soil	QGIQALAQVTTPIIKLPMKIRRQCGRCGDFNSVLVKPGQAVPAFKCSACGYPAG
Ga0306921_114531202	3300031912	Soil	LAQVTTPIIKLPMKIRRQCGRCGDFNSVLAEPGQAVPAFKCSACGYAAG
Ga0310912_105919071	3300031941	Soil	KIRRQCGHCGDFNSVLVEPGQAVPAFKCLACGYAAG
Ga0310916_105588931	3300031942	Soil	LAQVTTPIIKLPMKIRRQCGRCGDFNSVLVQPGQAVPAFKCSACGYAPG
Ga0310910_104786783	3300031946	Soil	IKLPMKIRRQCGRCGDFNSVLVEPGQAVPAFKCSACRYPAG
Ga0310909_109510711	3300031947	Soil	AQGIQALAQITTPIIKLPMKIRLQCGRCGDFNSVLVEPGQAVPAFKCSACGYAAG
Ga0310909_110242492	3300031947	Soil	MTKTELRAQGIQALAQVTTPIIKLPMKIRRQCGRCGDFNSVLVEPGQAVPAFKCSA
Ga0310909_112409083	3300031947	Soil	MKIRRQCGCCGDFNSVLVEPGQAVPAFKCSVCGYAAG
Ga0306926_108023433	3300031954	Soil	ALAQVTTPIIKLPMKIRRQCGRCGDFNSVLVEPGQAVPAFKCWACGYPAG
Ga0306926_109436362	3300031954	Soil	AQVTTPIIKLPMKIKRQCGRCGDFNSVLVEPGQAVPAFKCSACGYPAG
Ga0307479_109478711	3300031962	Hardwood Forest Soil	RAQGIQALAQVTTPIIKLPTKIRRQCGCCGDFNSVLVEPGQAVPAFKCSACGYAAG
Ga0318531_102619751	3300031981	Soil	AELRAQGIQALAQVTTPIIKLPMKIRRQCGRCGDFNSVLAEPGQAVPAFKCSACGYAAG
Ga0306922_100427508	3300032001	Soil	LAQVTTPIIKLPMKIRRQCGRCGDFNSVLVKPGQAVPAFKCSACGYPAG
Ga0306922_119149281	3300032001	Soil	IIKLPMKIRRQCGRCGDFNSVLVEPGQAVPAFKCSACRYPAG
Ga0310911_107932302	3300032035	Soil	LRAQGIEALAQVTTPIIKLPMKIRRQCGRCCHFNSVLVEPGQAVPTFKCSACGYAAG
Ga0318545_101600131	3300032042	Soil	QALAQVTTPIIKLPMKIRRQCGRCGDFNSVLVEPGQAVPAFKCSACGYAAR
Ga0318558_101785951	3300032044	Soil	IQALAQVTTPIIKLPMKIRRQCGRCGGLNSVLVEPGQAVPAFKCSACGYPAG
Ga0318532_101217871	3300032051	Soil	LAQVTTPIIKLPMKIRRQCGRCGDFNSVLVEPGQAVPAFKCSACGYAAG
Ga0318532_101386612	3300032051	Soil	GIQALAQVTTPIIKLPMKIRRQCGRCGDFNSVLVKPGQAVPAFKCSACGYPAG
Ga0318506_101188664	3300032052	Soil	ELRAQGIQALAQVTTPIIKLPMKIRRQCGRCGDFNSVLVKPGQAVPAFKCSACGYPAG
Ga0318506_102465641	3300032052	Soil	KLPMKIRRQCGRCGDFNSVLVEPGQAVPAFKCSACGYPAG
Ga0318575_101750061	3300032055	Soil	PIIKLPMKIRRQCGRCGDFNSVLVEPGQAVPAFKCSACGYAAG
Ga0318575_103103021	3300032055	Soil	MTKTELRAQGIQALAQVTTPIIKLPMKIRRQCGRCGDFNSVLVEPGQAVPAFKC
Ga0318533_100419331	3300032059	Soil	IKLPMKIRRQCGRCGDFNSVLVEPGQAVPAFKCSACGYPAG
Ga0318533_103153681	3300032059	Soil	IQALAQVTTPIIKLPMKIRRQCGRCGDFNSVLVEPGQAVPAFKCSACRYPAG
Ga0318533_108339691	3300032059	Soil	QALAQVTTPIIKLPMKIRRQCGRCGDFNSVLVEPGQAVPAFKCSACGYAAGNPRLV
Ga0318533_108409341	3300032059	Soil	QGIQALAQVTTPIIKLPMKIRRQCGCCGDFNSVLVEPGQAVPAFKCSVCGYAAG
Ga0318553_102493201	3300032068	Soil	VTTPIVKLPMKIRRQCRRCGDFNSVLVEPGQAVPAFKCSACGYPAG
Ga0318553_105597051	3300032068	Soil	IIKLPMKIRRQCGRCGDFNSVRVEPGQAVPAFKCSACGYPAA
Ga0318525_105239851	3300032089	Soil	LAQVTTPIIKLPMKIRRQCGRCGGFNSVLVEPGQAVPAFKCSACGYPAG
Ga0318577_106076161	3300032091	Soil	AELRAQGIQALAQVTTPIIKLPMKIRRQCGRCGDFNSVLVQPGQAVPAFKCSACGYAAG
Ga0318540_101571771	3300032094	Soil	IKLPIKIRRQCGRCGDFNSVLVQPGQAVPAFKCSACGYRAG
Ga0318540_106629861	3300032094	Soil	PMKIRRQCGRCGDFNSVLVEPGQAVPAFKCSACGYAAGNPRLV
Ga0318519_104025221	3300033290	Soil	QALAQVTTPIIKLPMKIRRQCGRCGDFNSVLAEPGQAVPAFKCSACGYAAG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F037868

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences