NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F037879

Metagenome / Metatranscriptome Family F037879

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F037879
Family Type Metagenome / Metatranscriptome
Number of Sequences 167
Average Sequence Length 49 residues
Representative Sequence WVWYVGPFAGGALAALAYDYLYLRPPRPEPVGPPETGVIEPRPGDAATS
Number of Associated Samples 147
Number of Associated Scaffolds 167

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 1.20 %
% of genes near scaffold ends (potentially truncated) 98.80 %
% of genes from short scaffolds (< 2000 bps) 94.61 %
Associated GOLD sequencing projects 140
AlphaFold2 3D model prediction Yes
3D model pTM-score0.50

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (86.826 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(14.371 % of family members)
Environment Ontology (ENVO) Unclassified
(28.144 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(49.102 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Fibrous Signal Peptide: Yes Secondary Structure distribution: α-helix: 33.77%    β-sheet: 0.00%    Coil/Unstructured: 66.23%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.50
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 167 Family Scaffolds
PF13442Cytochrome_CBB3 14.37
PF01380SIS 9.58
PF00034Cytochrom_C 6.59
PF00127Copper-bind 6.59
PF13473Cupredoxin_1 5.99
PF14742GDE_N_bis 2.99
PF08359TetR_C_4 2.40
PF02230Abhydrolase_2 2.40
PF00881Nitroreductase 2.40
PF02583Trns_repr_metal 1.80
PF01709Transcrip_reg 1.80
PF00300His_Phos_1 1.80
PF00293NUDIX 1.20
PF03358FMN_red 1.20
PF13537GATase_7 1.20
PF00092VWA 0.60
PF00463ICL 0.60
PF13522GATase_6 0.60
PF00248Aldo_ket_red 0.60
PF03631Virul_fac_BrkB 0.60
PF07676PD40 0.60
PF00166Cpn10 0.60
PF00685Sulfotransfer_1 0.60
PF02543Carbam_trans_N 0.60
PF07883Cupin_2 0.60
PF13231PMT_2 0.60
PF04185Phosphoesterase 0.60
PF13419HAD_2 0.60

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 167 Family Scaffolds
COG1309DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmATranscription [K] 2.40
COG0217Transcriptional and/or translational regulatory protein YebC/TACO1Translation, ribosomal structure and biogenesis [J] 1.80
COG1937DNA-binding transcriptional regulator, FrmR familyTranscription [K] 1.80
COG0234Co-chaperonin GroES (HSP10)Posttranslational modification, protein turnover, chaperones [O] 0.60
COG1295Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)Function unknown [S] 0.60
COG2192Predicted carbamoyl transferase, NodU familyGeneral function prediction only [R] 0.60
COG2224Isocitrate lyaseEnergy production and conversion [C] 0.60
COG3511Phospholipase CCell wall/membrane/envelope biogenesis [M] 0.60

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms86.83 %
UnclassifiedrootN/A13.17 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2170459009|GA8DASG01BYG9UNot Available512Open in IMG/M
3300000956|JGI10216J12902_110719796All Organisms → cellular organisms → Bacteria838Open in IMG/M
3300002568|C688J35102_119676825All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria746Open in IMG/M
3300004081|Ga0063454_100697018All Organisms → cellular organisms → Bacteria764Open in IMG/M
3300004081|Ga0063454_101617638All Organisms → cellular organisms → Bacteria560Open in IMG/M
3300004153|Ga0063455_100051282All Organisms → cellular organisms → Bacteria1415Open in IMG/M
3300004153|Ga0063455_101137382All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria580Open in IMG/M
3300004635|Ga0062388_101292551All Organisms → cellular organisms → Bacteria727Open in IMG/M
3300004643|Ga0062591_102239175All Organisms → cellular organisms → Bacteria569Open in IMG/M
3300005171|Ga0066677_10814973All Organisms → cellular organisms → Bacteria516Open in IMG/M
3300005179|Ga0066684_10193095All Organisms → cellular organisms → Bacteria1313Open in IMG/M
3300005179|Ga0066684_10226477All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1218Open in IMG/M
3300005184|Ga0066671_10245892All Organisms → cellular organisms → Bacteria1099Open in IMG/M
3300005187|Ga0066675_10506568All Organisms → cellular organisms → Bacteria903Open in IMG/M
3300005329|Ga0070683_100356027All Organisms → cellular organisms → Bacteria1394Open in IMG/M
3300005330|Ga0070690_101280173All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria587Open in IMG/M
3300005336|Ga0070680_100055283All Organisms → cellular organisms → Bacteria3243Open in IMG/M
3300005339|Ga0070660_100753872All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria817Open in IMG/M
3300005339|Ga0070660_100761107All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria813Open in IMG/M
3300005355|Ga0070671_100967926All Organisms → cellular organisms → Bacteria745Open in IMG/M
3300005435|Ga0070714_101118620All Organisms → cellular organisms → Bacteria768Open in IMG/M
3300005439|Ga0070711_102067115Not Available501Open in IMG/M
3300005450|Ga0066682_10149047All Organisms → cellular organisms → Bacteria1489Open in IMG/M
3300005458|Ga0070681_10895757All Organisms → cellular organisms → Bacteria806Open in IMG/M
3300005467|Ga0070706_101502299All Organisms → cellular organisms → Bacteria616Open in IMG/M
3300005535|Ga0070684_100870663All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria843Open in IMG/M
3300005536|Ga0070697_101224389All Organisms → cellular organisms → Bacteria669Open in IMG/M
3300005540|Ga0066697_10479549All Organisms → cellular organisms → Bacteria710Open in IMG/M
3300005545|Ga0070695_100246345All Organisms → cellular organisms → Bacteria1299Open in IMG/M
3300005558|Ga0066698_10711667All Organisms → cellular organisms → Bacteria661Open in IMG/M
3300005561|Ga0066699_11143504All Organisms → cellular organisms → Bacteria536Open in IMG/M
3300005566|Ga0066693_10433565All Organisms → cellular organisms → Bacteria537Open in IMG/M
3300005576|Ga0066708_10803574All Organisms → cellular organisms → Bacteria590Open in IMG/M
3300005578|Ga0068854_101752141All Organisms → cellular organisms → Bacteria569Open in IMG/M
3300005718|Ga0068866_10496770All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium806Open in IMG/M
3300005764|Ga0066903_104598901All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria735Open in IMG/M
3300005764|Ga0066903_107413721All Organisms → cellular organisms → Bacteria566Open in IMG/M
3300006031|Ga0066651_10584340All Organisms → cellular organisms → Bacteria593Open in IMG/M
3300006046|Ga0066652_100637498All Organisms → cellular organisms → Bacteria1009Open in IMG/M
3300006046|Ga0066652_100943398All Organisms → cellular organisms → Bacteria821Open in IMG/M
3300006173|Ga0070716_101769636Not Available511Open in IMG/M
3300006794|Ga0066658_10521232All Organisms → cellular organisms → Bacteria647Open in IMG/M
3300006796|Ga0066665_10398520All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1135Open in IMG/M
3300006800|Ga0066660_11215148All Organisms → cellular organisms → Bacteria591Open in IMG/M
3300006844|Ga0075428_101713188All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae656Open in IMG/M
3300006871|Ga0075434_101871385Not Available606Open in IMG/M
3300006903|Ga0075426_11401319Not Available531Open in IMG/M
3300006904|Ga0075424_102652747All Organisms → cellular organisms → Bacteria523Open in IMG/M
3300006914|Ga0075436_100764381All Organisms → cellular organisms → Bacteria718Open in IMG/M
3300006918|Ga0079216_10648775All Organisms → cellular organisms → Bacteria739Open in IMG/M
3300007076|Ga0075435_100510400All Organisms → cellular organisms → Bacteria1040Open in IMG/M
3300009012|Ga0066710_104292992All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria533Open in IMG/M
3300009089|Ga0099828_10712143All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria901Open in IMG/M
3300009090|Ga0099827_10023071All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria4360Open in IMG/M
3300009137|Ga0066709_102087114All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium784Open in IMG/M
3300009137|Ga0066709_102622458Not Available674Open in IMG/M
3300009148|Ga0105243_11976657All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium617Open in IMG/M
3300009551|Ga0105238_11381756All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria731Open in IMG/M
3300009551|Ga0105238_11614359All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria679Open in IMG/M
3300009840|Ga0126313_11071966All Organisms → cellular organisms → Bacteria662Open in IMG/M
3300009840|Ga0126313_11414799All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria576Open in IMG/M
3300010036|Ga0126305_10584801All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium750Open in IMG/M
3300010040|Ga0126308_10091038All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae1852Open in IMG/M
3300010042|Ga0126314_11358872All Organisms → cellular organisms → Bacteria533Open in IMG/M
3300010044|Ga0126310_10122379All Organisms → cellular organisms → Bacteria1615Open in IMG/M
3300010045|Ga0126311_10582774All Organisms → cellular organisms → Bacteria884Open in IMG/M
3300010045|Ga0126311_10939673All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium704Open in IMG/M
3300010166|Ga0126306_10668101All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria831Open in IMG/M
3300010321|Ga0134067_10496555All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium505Open in IMG/M
3300010326|Ga0134065_10451420Not Available526Open in IMG/M
3300010335|Ga0134063_10483348All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium618Open in IMG/M
3300010371|Ga0134125_11318265All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium788Open in IMG/M
3300010373|Ga0134128_10920199All Organisms → cellular organisms → Bacteria968Open in IMG/M
3300010375|Ga0105239_12761578All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium573Open in IMG/M
3300010375|Ga0105239_13171501All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria535Open in IMG/M
3300010400|Ga0134122_10566129All Organisms → cellular organisms → Bacteria1042Open in IMG/M
3300012008|Ga0120174_1064223All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria974Open in IMG/M
3300012189|Ga0137388_10533102Not Available1091Open in IMG/M
3300012199|Ga0137383_11040969All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium595Open in IMG/M
3300012200|Ga0137382_10128607Not Available1699Open in IMG/M
3300012200|Ga0137382_10853125Not Available656Open in IMG/M
3300012206|Ga0137380_11009177Not Available711Open in IMG/M
3300012207|Ga0137381_11079613All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium691Open in IMG/M
3300012208|Ga0137376_11418605All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria585Open in IMG/M
3300012210|Ga0137378_10852549All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium824Open in IMG/M
3300012211|Ga0137377_11403797Not Available627Open in IMG/M
3300012211|Ga0137377_11640151Not Available566Open in IMG/M
3300012351|Ga0137386_10608242Not Available787Open in IMG/M
3300012353|Ga0137367_10051761All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales3085Open in IMG/M
3300012354|Ga0137366_10469579All Organisms → cellular organisms → Bacteria911Open in IMG/M
3300012356|Ga0137371_11266244All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium547Open in IMG/M
3300012532|Ga0137373_10421305All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1033Open in IMG/M
3300012930|Ga0137407_11270946All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria699Open in IMG/M
3300012930|Ga0137407_11909343All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria566Open in IMG/M
3300012941|Ga0162652_100046739All Organisms → cellular organisms → Bacteria695Open in IMG/M
3300012958|Ga0164299_10010354All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3439Open in IMG/M
3300012988|Ga0164306_10214654All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1358Open in IMG/M
3300013100|Ga0157373_10888665All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria660Open in IMG/M
3300013105|Ga0157369_11760249All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria629Open in IMG/M
3300013307|Ga0157372_10381346All Organisms → cellular organisms → Bacteria1643Open in IMG/M
3300013766|Ga0120181_1051329All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium930Open in IMG/M
3300014166|Ga0134079_10168134All Organisms → cellular organisms → Bacteria897Open in IMG/M
3300014166|Ga0134079_10681364Not Available522Open in IMG/M
3300014829|Ga0120104_1086000All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium621Open in IMG/M
3300015356|Ga0134073_10363415All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium535Open in IMG/M
3300015373|Ga0132257_104610883Not Available501Open in IMG/M
3300018027|Ga0184605_10254553Not Available798Open in IMG/M
3300018052|Ga0184638_1160624All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes807Open in IMG/M
3300018066|Ga0184617_1089479All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium846Open in IMG/M
3300018071|Ga0184618_10274765All Organisms → cellular organisms → Bacteria715Open in IMG/M
3300018071|Ga0184618_10515211All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium501Open in IMG/M
3300018072|Ga0184635_10271387All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium669Open in IMG/M
3300018433|Ga0066667_11265706All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria644Open in IMG/M
3300018468|Ga0066662_11147401All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria781Open in IMG/M
3300019255|Ga0184643_1434136All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium649Open in IMG/M
3300019362|Ga0173479_10636952All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium564Open in IMG/M
3300020001|Ga0193731_1014473Not Available2041Open in IMG/M
3300020069|Ga0197907_10660393All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria659Open in IMG/M
3300020070|Ga0206356_10061312All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria708Open in IMG/M
3300020078|Ga0206352_10480242All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria866Open in IMG/M
3300021073|Ga0210378_10321304All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria580Open in IMG/M
3300021377|Ga0213874_10189422All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria735Open in IMG/M
3300021951|Ga0222624_1501205Not Available617Open in IMG/M
3300022756|Ga0222622_10527708All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium846Open in IMG/M
3300024288|Ga0179589_10234967Not Available811Open in IMG/M
3300024323|Ga0247666_1007040All Organisms → cellular organisms → Bacteria2503Open in IMG/M
3300025904|Ga0207647_10085906All Organisms → cellular organisms → Bacteria1881Open in IMG/M
3300025910|Ga0207684_10215385All Organisms → cellular organisms → Bacteria1657Open in IMG/M
3300025914|Ga0207671_10937165All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria684Open in IMG/M
3300025915|Ga0207693_10268129All Organisms → cellular organisms → Bacteria1338Open in IMG/M
3300025920|Ga0207649_10113807All Organisms → cellular organisms → Bacteria1812Open in IMG/M
3300025929|Ga0207664_10779485All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria860Open in IMG/M
3300025981|Ga0207640_11285809All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria653Open in IMG/M
3300026067|Ga0207678_11114917All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria699Open in IMG/M
3300026089|Ga0207648_10923902All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium816Open in IMG/M
3300026312|Ga0209153_1092962All Organisms → cellular organisms → Bacteria1125Open in IMG/M
3300026326|Ga0209801_1364226All Organisms → cellular organisms → Bacteria509Open in IMG/M
3300026552|Ga0209577_10683246All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria584Open in IMG/M
3300027882|Ga0209590_10513963All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria773Open in IMG/M
3300028714|Ga0307309_10184259All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium543Open in IMG/M
3300028717|Ga0307298_10148274All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium681Open in IMG/M
3300028717|Ga0307298_10275539All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium502Open in IMG/M
3300028784|Ga0307282_10383476All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria680Open in IMG/M
3300028787|Ga0307323_10085679All Organisms → cellular organisms → Bacteria1125Open in IMG/M
3300028793|Ga0307299_10184964All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria784Open in IMG/M
3300028799|Ga0307284_10024080All Organisms → cellular organisms → Bacteria1982Open in IMG/M
3300028807|Ga0307305_10029188All Organisms → cellular organisms → Bacteria2515Open in IMG/M
3300028807|Ga0307305_10515311All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium535Open in IMG/M
3300028811|Ga0307292_10325846All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium646Open in IMG/M
3300028814|Ga0307302_10529438All Organisms → cellular organisms → Bacteria585Open in IMG/M
3300028819|Ga0307296_10621706All Organisms → cellular organisms → Bacteria591Open in IMG/M
3300028824|Ga0307310_10578736All Organisms → cellular organisms → Bacteria571Open in IMG/M
3300028828|Ga0307312_10742091All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium650Open in IMG/M
3300028828|Ga0307312_11110592All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium523Open in IMG/M
3300028828|Ga0307312_11178782All Organisms → cellular organisms → Bacteria506Open in IMG/M
3300028875|Ga0307289_10322830All Organisms → cellular organisms → Bacteria635Open in IMG/M
3300028881|Ga0307277_10033054Not Available2067Open in IMG/M
3300028884|Ga0307308_10096258Not Available1408Open in IMG/M
3300030058|Ga0302179_10325490All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium677Open in IMG/M
3300031548|Ga0307408_100703569All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium908Open in IMG/M
3300031708|Ga0310686_113003557All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium615Open in IMG/M
3300031903|Ga0307407_10785635All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium723Open in IMG/M
3300031938|Ga0308175_102333253All Organisms → cellular organisms → Bacteria600Open in IMG/M
3300031996|Ga0308176_11929822All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria631Open in IMG/M
3300032004|Ga0307414_11224938All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium695Open in IMG/M
3300032013|Ga0310906_10033269All Organisms → cellular organisms → Bacteria2375Open in IMG/M
3300034172|Ga0334913_082837All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria677Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil14.37%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil12.57%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil11.98%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil5.39%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.19%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment3.59%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil3.59%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil3.59%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere3.59%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere2.40%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere2.40%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil2.99%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere2.99%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment1.80%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.80%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere1.80%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost1.80%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil1.80%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.80%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere1.80%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.80%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.20%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil1.20%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.20%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil0.60%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.60%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.60%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.60%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil0.60%
Sub-Biocrust SoilEnvironmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil0.60%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.60%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.60%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa0.60%
SoilEnvironmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil0.60%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.60%
Plant RootsHost-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots0.60%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.60%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.60%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2170459009Grass soil microbial communities from Rothamsted Park, UK - July 2009 indirect DNA Tissue lysis 0-10cmEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300004081Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)EnvironmentalOpen in IMG/M
3300004153Grasslands soil microbial communities from Hopland, California, USA (version 2)EnvironmentalOpen in IMG/M
3300004635Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3EnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005171Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126EnvironmentalOpen in IMG/M
3300005179Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133EnvironmentalOpen in IMG/M
3300005184Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120EnvironmentalOpen in IMG/M
3300005187Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124EnvironmentalOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005336Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaGEnvironmentalOpen in IMG/M
3300005339Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaGHost-AssociatedOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005450Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131EnvironmentalOpen in IMG/M
3300005458Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaGEnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005535Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146EnvironmentalOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147EnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005566Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142EnvironmentalOpen in IMG/M
3300005576Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157EnvironmentalOpen in IMG/M
3300005578Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2Host-AssociatedOpen in IMG/M
3300005718Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006031Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100EnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006794Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107EnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300006918Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100EnvironmentalOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300009840Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105AEnvironmentalOpen in IMG/M
3300010036Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26EnvironmentalOpen in IMG/M
3300010040Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55EnvironmentalOpen in IMG/M
3300010042Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105BEnvironmentalOpen in IMG/M
3300010044Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60EnvironmentalOpen in IMG/M
3300010045Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61EnvironmentalOpen in IMG/M
3300010166Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27EnvironmentalOpen in IMG/M
3300010321Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015EnvironmentalOpen in IMG/M
3300010326Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300012008Permafrost microbial communities from Nunavut, Canada - A39_80cm_12MEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012353Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012354Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012532Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012941Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t4i015EnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300012988Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MGEnvironmentalOpen in IMG/M
3300013100Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaGHost-AssociatedOpen in IMG/M
3300013105Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaGHost-AssociatedOpen in IMG/M
3300013307Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaGHost-AssociatedOpen in IMG/M
3300013766Permafrost microbial communities from Nunavut, Canada - A26_65cm_6MEnvironmentalOpen in IMG/M
3300014166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015EnvironmentalOpen in IMG/M
3300014829Permafrost microbial communities from Nunavut, Canada - A10_35cm_6MEnvironmentalOpen in IMG/M
3300015356Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300018027Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coexEnvironmentalOpen in IMG/M
3300018052Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2EnvironmentalOpen in IMG/M
3300018066Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1EnvironmentalOpen in IMG/M
3300018071Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1EnvironmentalOpen in IMG/M
3300018072Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300019255Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019362Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)EnvironmentalOpen in IMG/M
3300020001Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a2EnvironmentalOpen in IMG/M
3300020069Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020070Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300021073Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redoEnvironmentalOpen in IMG/M
3300021377Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7Host-AssociatedOpen in IMG/M
3300021951Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300024288Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungalEnvironmentalOpen in IMG/M
3300024323Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK07EnvironmentalOpen in IMG/M
3300025904Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025914Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025920Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025929Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025981Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026067Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026312Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)EnvironmentalOpen in IMG/M
3300026326Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)EnvironmentalOpen in IMG/M
3300026552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)EnvironmentalOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300028714Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_196EnvironmentalOpen in IMG/M
3300028717Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158EnvironmentalOpen in IMG/M
3300028784Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121EnvironmentalOpen in IMG/M
3300028787Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381EnvironmentalOpen in IMG/M
3300028793Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159EnvironmentalOpen in IMG/M
3300028799Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123EnvironmentalOpen in IMG/M
3300028807Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186EnvironmentalOpen in IMG/M
3300028811Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149EnvironmentalOpen in IMG/M
3300028814Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183EnvironmentalOpen in IMG/M
3300028819Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153EnvironmentalOpen in IMG/M
3300028824Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197EnvironmentalOpen in IMG/M
3300028828Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202EnvironmentalOpen in IMG/M
3300028875Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143EnvironmentalOpen in IMG/M
3300028881Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116EnvironmentalOpen in IMG/M
3300028884Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195EnvironmentalOpen in IMG/M
3300030058Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_1EnvironmentalOpen in IMG/M
3300031548Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3Host-AssociatedOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031903Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1Host-AssociatedOpen in IMG/M
3300031938Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1EnvironmentalOpen in IMG/M
3300031996Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2EnvironmentalOpen in IMG/M
3300032004Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3Host-AssociatedOpen in IMG/M
3300032013Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3EnvironmentalOpen in IMG/M
3300034172Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 9HMSEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
F47_038086702170459009Grass SoilLAGGVIAACVYEMLYLRPTKPAPVGPPETGVLEHAPGEAAAS
JGI10216J12902_11071979613300000956SoilVQNVWTDAWVWYVGPVLGGVLAALAYEWLYLRPLSPVPVGPPETGVEEPGPGRAAAS*
C688J35102_11967682523300002568SoilAGGVIAASLYELLYLRPPRPVPVGPPETGVEEIRPGDAAVE*
Ga0063454_10069701813300004081SoilVWYVGPFAGAVIAAALYELLYLRPTAPEPVGPPETGVEEPGAGEAAYS*
Ga0063454_10161763813300004081SoilRDWSDAWVWYLGPFLGGALAAVVYEWLYLRPPAPLPVGPPETGVIEPRPGDAAVS*
Ga0063455_10005128223300004153SoilWVWYVGPFAGGALAAVAYEWLYLRPPAPLPVGPPETGVIEPRPGDAAVS*
Ga0063455_10113738223300004153SoilAGAVIAGSLYELLYLRPDRPEPVGPPESGVEEPGAGEAALS*
Ga0062388_10129255113300004635Bog Forest SoilNGWVWYAGPVLGAAVAALLYEFLYLRPAASEQAGPPETGVLEPGISDAAS*
Ga0062591_10223917523300004643SoilWVWYAGPFIGGVLAALAYEYLYLRSPGPLPVGPPDSGVIEPRPGDTALS*
Ga0066677_1081497323300005171SoilANGWVWYVGPAIGGALAAIAYELLYLRPLAPVPVGPAETGVQEPRPGDTAAS*
Ga0066684_1019309513300005179SoilWGHFWVWYVGPLAGGAIAALLYEALYLGPPKPEPVGPPETGVEEAAPGTAALE*
Ga0066684_1022647713300005179SoilVWYIGPFAGAVIAASLYELLYLRPARPVPVGPPETGVVEIRPGDAAVE*
Ga0066671_1024589213300005184SoilWWVWYAGPVVGACVAALTYEWLYLRMRPLPVGPPESGVIEPRPGETAVT*
Ga0066675_1050656823300005187SoilGPLLGGALAALAYEWLYLRPLSPVPVGPPETGVEEPGPGRAAAQ*
Ga0070683_10035602743300005329Corn RhizosphereGPLLGAGLAALAYEWLYLRPLSPEPVGPPETGLEEPGAGDPAAI*
Ga0070690_10128017313300005330Switchgrass RhizosphereWYIGPFAGGVIAASLYELLYLRPTKPVPVGPPETGVEEVRPGDAAVE*
Ga0070680_10005528373300005336Corn RhizosphereGPLIGAGLAALAYEHLYLRPLSPEPVGPPETGLEEPGAGDPAAI*
Ga0070660_10075387223300005339Corn RhizosphereGPLAGGVIAASVYELLYLRPSRPAPVGPPETGVEEPGAGEAALS*
Ga0070660_10076110723300005339Corn RhizospherePFAGAVIAASLYELLYLRPAGPEPVGPPESGVEEPGAGEAALS*
Ga0070671_10096792633300005355Switchgrass RhizosphereGPLIGGGLAALAYDRLYLRPASPEPVGPPETGVEQPGAGEAATL*
Ga0070714_10111862013300005435Agricultural SoilGNHWSHFWVWYVGPLAGGVIAASIYEMLYLRPSRPVPVGPPETGVVEIAPGEAAAG*
Ga0070711_10206711523300005439Corn, Switchgrass And Miscanthus RhizosphereVDNHWSHFWVWYIGPIAGGAIAALVYEALYLGPPKPEPVGPPETGVEEIAPGTAALE*
Ga0066682_1014904733300005450SoilHWADAWVWYAGPFLGGVLAALAYEYLYLRSPGPLPVGPPDTGVIEPRPGDAAAS*
Ga0070681_1089575713300005458Corn RhizosphereFWVWYVGPLAGGVIAASVYELLYLRPDRPAPVGPPESGVEEPGAGEAALS*
Ga0070706_10150229913300005467Corn, Switchgrass And Miscanthus RhizosphereNGWVWYAGPAVGAVVAALAYEWLYLRPLRPEPVGPAETGVREPRPGDAAAS*
Ga0070684_10087066323300005535Corn RhizosphereGPFAGAVIAASLYELLYLRPAGPEPVGPPESGVEEPGAGEAALS*
Ga0070697_10122438923300005536Corn, Switchgrass And Miscanthus RhizosphereHEWTDAWVWYVGPFAGAVLAALSYEWLYLRPLRPLTVGPPETGVLEPGAGDSP*
Ga0066697_1047954913300005540SoilDAWVWYVGPFLGAALAALAYEYLYLRPPRPVPVGPPDTGVVEPRPGDAAVS*
Ga0070695_10024634513300005545Corn, Switchgrass And Miscanthus RhizosphereAWVWYAGPFVGGALAALVYEWLYLRPPRPLPVGPPDTGVLEPRPGDSAAS*
Ga0066698_1071166713300005558SoilQNAWGSGWVWYLGPVLGAVLAALAYEWLYLRPLSPEPVGPPETGVEEPAPGQAATG*
Ga0066699_1114350423300005561SoilPQLAGGHWANGWVWYVGPVAGATVAALAYEWLYLRPLRPKPVGPAETGVREPRPGDAAAS
Ga0066693_1043356513300005566SoilQNVWSDAWVWYLGPLLGAALGALAYEWLYLRPLSPVPVGPPETGVEEPAPGRAATS*
Ga0066708_1080357423300005576SoilNHWGHFWVWYVGPIAGGAIAALVYEALYLGPPRPEPVGPPETGVQETAPGTAALE*
Ga0068854_10175214113300005578Corn RhizosphereDSWKHWWVWYVGPFAGAVIAASLYEILYLRPSRPEPVGPPETGVEEPGAGDAALS*
Ga0068866_1049677013300005718Miscanthus RhizosphereLGPAIGAVAAALVYEYLYLRPASPEPVGPPETGVEEPGAGETATA*
Ga0066903_10459890133300005764Tropical Forest SoilPLLGGGVAALLYEFLYPKKLGPEPVGPPETGVEEPRPGQTAADV*
Ga0066903_10741372123300005764Tropical Forest SoilGNYWSHAWIWYAGPFLGGAAAALVYDLVYLRVIAPVTPVGPPETGLEEPRPGDTAVS*
Ga0066651_1058434033300006031SoilTNWWVWYAGPVVGAVLAAGVYEWLYLRPPRPFPVGPPETGVIEPRPGDTAVS*
Ga0066652_10063749813300006046SoilWVWYVGPFAGGALAALAYDYLYLRPPRPEPVGPPETGVIEPRPGDAATS*
Ga0066652_10094339813300006046SoilWYVGPLAGGAIAALLYEALYLGPPKPEPVGPPETGVEEAAPGTAALE*
Ga0070716_10176963623300006173Corn, Switchgrass And Miscanthus RhizosphereHFWVWYVGPIAGGAIAALVYEALYLGPPKPEPVGPPETGVEEIAPGTAALE*
Ga0066658_1052123213300006794SoilWGQCWIYYLGPALGAVIAALGYEWLYLRPLRPVPVGPPETGVEDPRLGDTAAS*
Ga0066665_1039852033300006796SoilGWVWYAGPALGAVVAALAYEYLYLRPLSPVPVGPSETGVREPRPGDTAAS*
Ga0066660_1121514823300006800SoilHTAGSNGWVWYLGPALGAVLAALAYEWLYLRPLGPEPVGPPETGVEEPAPGQAATG*
Ga0075428_10171318823300006844Populus RhizospherePFLGGAAAALLYEYLYLRPLEPEPVGPPETGLDEPAPGEAAGV*
Ga0075434_10187138523300006871Populus RhizospherePFAGAVIAAVIYEVLYLRPPRPLPVGPPESGLEEPAPGEAALE*
Ga0075426_1140131923300006903Populus RhizosphereVWSNAWIWYAGPFLGGAAAALAYDLLYLRHGGPTPVGPPESGLEEPRPGDAAVS*
Ga0075424_10265274723300006904Populus RhizosphereVWYVGPLVGGAVAALAYEWLYLRPPAPMPVGPPETGVIEPRPGDTAVS*
Ga0075436_10076438113300006914Populus RhizosphereWVYWVGPLIGAGLAALAYERLYLRPVSPEPVGPPETGLEEPGAGDPAAL*
Ga0079216_1064877523300006918Agricultural SoilGGDWADAWIYYLGPLGGGAAAALLYETLYLRPARPVPVGPPETGLEEPRPGDTAAR*
Ga0075435_10051040013300007076Populus RhizosphereVGPLLGAGIAALAYHHLYLRTLSLEPPGPPETGLEEPRPGDAASI*
Ga0066710_10429299213300009012Grasslands SoilVWYVGPLAGGAIASLVYEALYLGPPKPEPVGPPETGVEEIAPGTAALE
Ga0099828_1071214333300009089Vadose Zone SoilWYAGPLVGGAIAALVYEYLYLRPLAPVPVGPPETGVQEPRPGDTAAS*
Ga0099827_1002307113300009090Vadose Zone SoilWYAGPLVGGAIAALAYEYLYLRPLAPVPVGPPETGVQEPRPGDTAAS*
Ga0066709_10208711423300009137Grasslands SoilAVLAAFAYEFLYLRPTEPAPVGPPETGVEEPGVGRAAAG*
Ga0066709_10262245823300009137Grasslands SoilLAGGAIAALVYEALYLGPPKPEPVGPPETGVEEIAPGTAALE*
Ga0105243_1197665723300009148Miscanthus RhizosphereYWVGPLIGGGLAALAYDRLYLRPPSPEPVGPPETGLDEPGAGEAASL*
Ga0105238_1138175613300009551Corn RhizosphereGPLAGGVIAASIYEMLYLRPSRPEPVGAPETGVIEIAPGEAAAG*
Ga0105238_1161435923300009551Corn RhizosphereVWYIGPCAGGVIAAAVYELLYLRPTRPEPVGPPETGVEEPRAGDAALS*
Ga0126313_1107196623300009840Serpentine SoilDGWVWYLGPLLGGGLGALTYEYLYLRPARPAPVGPPETGIEEPRPGDAAVS*
Ga0126313_1141479913300009840Serpentine SoilAWVWYLGPALGGVVAALAYERLYLSPLAPEPVGPPETGVLEPRPGDTALS*
Ga0126305_1058480113300010036Serpentine SoilLVQNIWSDAWVWYLGPAIGAIAAAWLYEYLYLRPLSPEPVGPPETGIEEPRPGQAAAS*
Ga0126308_1009103813300010040Serpentine SoilVGPAIGAVAAAWLYEYLYLRPLSPEPVGPPETGLEEPGAGEAALR*
Ga0126314_1135887223300010042Serpentine SoilVWYLGPALGGVVAALAYERLYLSPLAPEPVGPPETGVLEPRPGDTALS*
Ga0126310_1012237933300010044Serpentine SoilWYVGPLAGGVIAAVVYELLYLRPPRPAVVGPPETGVEEPRPGDTALS*
Ga0126311_1058277433300010045Serpentine SoilFWIWYVGPLAGGVIAAVVYELLYLRPPRPAVVGPPETGVEEPRPGDTALS*
Ga0126311_1093967313300010045Serpentine SoilDAWVWYVGPVIGAVIAAVLYEWLYLRPLAPVPVGPAESGVLEPRPGDTAAS*
Ga0126306_1066810123300010166Serpentine SoilYIGPFAGAVIAAVAYELLYLRPVGPAVVGPPETGVEEPRPGDTALS*
Ga0134067_1049655523300010321Grasslands SoilGWIYYLGPALGAVVAALAYEWLYLRPLAPTPVGPPETGVEEPRPGDTAVS*
Ga0134065_1045142013300010326Grasslands SoilHWTDGWVWYAGPVVGGCLAALAYEWLYLRMRPLPVGPPESGVIEPCPGETAVT*
Ga0134063_1048334823300010335Grasslands SoilNAWVWYVGPAAGALAAALAYEWLYLRPTEPEPVGPPETGVEEPGAGRAAAS*
Ga0134125_1131826513300010371Terrestrial SoilWVWYLGPAIGALAAALVYEYLYLRPVSPEPVGPPETGLEEPGAGETATA*
Ga0134128_1092019933300010373Terrestrial SoilFAGAVIAASLYELLYLRPERPAPVGPPESGVEEPGAGEAALS*
Ga0105239_1276157823300010375Corn RhizosphereSYWVGPLIGGALAALAYEHLYLRTLGPEPPGPPETGLEEPRPGDAASI*
Ga0105239_1317150113300010375Corn RhizospherePFAGGVIAASLYELLYLRPARPAPVGPPETGVEEPRPGDAALS*
Ga0134122_1056612933300010400Terrestrial SoilAGPFVGGALAALLYDTLYLRSPRPVEPVGTPDTGVIEPRPGDAALS*
Ga0120174_106422323300012008PermafrostSHFWVWYIGPFAGAVIAASTYELLYLRPARPVPVGSPETGVQEPRPGDAAVS*
Ga0137388_1053310213300012189Vadose Zone SoilWVWYVGPFLGGALAALAYDFLYLRPPRPVPVGPPETGVLEPRPGDAAVS*
Ga0137383_1104096913300012199Vadose Zone SoilVGPFIGGALAALAYDTLYLRTPRPLLPVGPPDSGVIEPRPGDTAAS*
Ga0137382_1012860713300012200Vadose Zone SoilGHWTDAWIWYVGPVAGATLATLAYEYLYLRPPRPLPVGPPDTGVIEPRPGDAAVS*
Ga0137382_1085312513300012200Vadose Zone SoilWVWYVGPFLGGALAALAYEYLYLRPPRPVPVGPPDTGVVEPRPGDAAVS*
Ga0137380_1100917713300012206Vadose Zone SoilHWSDAWVWYVGPFVGGALAALAYNYLYLRPPRPIPVGPPDTGVLEPRPGDAAVS*
Ga0137381_1107961313300012207Vadose Zone SoilAWVWYVGPAAGALAAALAYEWLYLRPTEPEPVGPPETGVEEPGAGRTAAG*
Ga0137376_1141860513300012208Vadose Zone SoilHWGHFWVWYVGPLAGGAIAALLYEALYLGPPKPEPVGPPETGVEETAPGTAALE*
Ga0137378_1085254923300012210Vadose Zone SoilGWVWYLGPALGAVLAALAYEWLYLRPLGPEPVGPPETGVEEPAPGQAATG*
Ga0137377_1140379723300012211Vadose Zone SoilPELVGNFWSHAWIWYAGPFLGGAAAALAYDLLYLRHGGPTPVGPPETGLEEPRAGDAAVS
Ga0137377_1164015123300012211Vadose Zone SoilVWYAGPFAGGALAALAYDFLYLRPPRPEPVGPPETGVLEPRPGDASTT*
Ga0137386_1060824223300012351Vadose Zone SoilWYVGPFVGGALAALAYDFLYLRPLRSLPVGPPETGVLEPRPGDTAVS*
Ga0137367_1005176113300012353Vadose Zone SoilWYIGPVLGAAAAALVYEFLYLRPLAPVPVGPAETGVREPRPGDAAAS*
Ga0137366_1046957913300012354Vadose Zone SoilQLVGGHWADCWIWYVGPTAGAVVAALAYEWLYLRPLGPTPVGPAATGVLEPRPGDAAAS*
Ga0137371_1126624413300012356Vadose Zone SoilWVWYAGPILGAVVAGLAYEFLYLRPLAPVPVGPPETGLDEPGPRETAVS*
Ga0137373_1042130513300012532Vadose Zone SoilLAGGHWADGWVWYLGPVIGAAAAALAYEWLYLRPLAPVPVGPAETGVREPRPGDAAAS*
Ga0137407_1127094613300012930Vadose Zone SoilAGAVIAASLYELLYLRPARPEPVGPPETGVEEPGAGEAAIS*
Ga0137407_1190934313300012930Vadose Zone SoilWVWYIGPFAGAVIAASVYELLYLRPDRPEPVGPAETGVSEPGAGEAALS*
Ga0162652_10004673913300012941SoilDRAHRAVGPLAGGVIAAVTYEMLYLRPLGPEVVGPPETGVEEPRPGDTALS*
Ga0164299_1001035413300012958SoilGPFAGGVIAASLYELLYLRPTKPVPVGPPETGVEEVRPGDAAVE*
Ga0164306_1021465413300012988SoilWVWYIGPFAGGVIAASLYELLYLRPTKPVPVGPPETGVEEVRPGDAAVE*
Ga0157373_1088866523300013100Corn RhizosphereAVIAASLYELLYLRPERPEPVGTPESGVEEPGAGKAALS*
Ga0157369_1176024913300013105Corn RhizosphereLAGGVIAASVYELLYLRPSRPAPVGPPETGVEEPGAGEAALS*
Ga0157372_1038134643300013307Corn RhizosphereYWVGPLLGAGLAALAYEWLYLRPLSPEPVGPPETGLEEPGAGDPAAI*
Ga0120181_105132913300013766PermafrostTDAWVWYAGPFVGGALAALVYDTLYLRTLRPLLPVGPPDSGVIEPRPGDTAVS*
Ga0134079_1016813413300014166Grasslands SoilVWSNAWVWYLGPLIGGALAALAYEWLYLRPVEPEPVGPPETGVEEPGAGRSAA*
Ga0134079_1068136433300014166Grasslands SoilQNHWTDGWVWYAGPVVGGCLAALAYEWLYLRMRPLPVGPPESGVIEPRPGETAVT*
Ga0120104_108600023300014829PermafrostVWYAGPFVGGALAALVYDALYLRTLRPLMPVGPPDSGVIEPRPGDTAVS*
Ga0134073_1036341513300015356Grasslands SoilNFWGEAWIYYLGPALGAVIAALAYEYLYLRPPRPEPVGPPETGVEEPRPGDTAAS*
Ga0132257_10461088323300015373Arabidopsis RhizosphereWVGPLIGAGLAALAYERLYLRPVSPEPVGPPETGLEEPGAGDPAAL*
Ga0184605_1025455313300018027Groundwater SedimentWIWYLGPFAGGALGALTYEWLYLRPPAPLPVGPPESGVIEPRPGDTAVS
Ga0184638_116062413300018052Groundwater SedimentNFWGDAWIYYTAPLVGGAAAALLYDYLYLRAPALVPPGPPETGLVEPRPGDAAAS
Ga0184617_108947913300018066Groundwater SedimentPAIGAVAAAWLYEYLYLRPLSPEPVGPPETGLDEPGPGRAAAT
Ga0184618_1027476523300018071Groundwater SedimentWANGWIWYIGPLIGGGAAALAYEFLYLRPLRPVPVGPPETGIEEPRPGDAAVS
Ga0184618_1051521123300018071Groundwater SedimentYVGPAIGGVLAALAYEWLYLRPVEPEPVGPPETGVEEPGAGEAALS
Ga0184635_1027138723300018072Groundwater SedimentVWSDAWVWYLGPAIGAVAAALVYEYLYLRPVSPEPVGPPETGLEEPGAGETATA
Ga0066667_1126570623300018433Grasslands SoilWYVGPLAGGAIAALVYEALYLGPPKPEPVGPPETGVEEIAPGTAALE
Ga0066662_1114740113300018468Grasslands SoilAGPFAGAVIAAALYEMLYLRPPTPEPVGPPETGVVEPRPGDAALS
Ga0184643_143413623300019255Groundwater SedimentWYLGPALGAVLAALAYEWLYLRPLEPEPVGPPETGIEEPAPGRAATE
Ga0173479_1063695223300019362SoilYVGPLVGGAAAALLYEYLYLRPPGPEPVGPPETGLDEPAPGEAAGV
Ga0193731_101447313300020001SoilDAWIWYVGPFVGGALAALVYDTLYLRTPRPLLPVGPPDSGVAEPRPGDTAAS
Ga0197907_1066039323300020069Corn, Switchgrass And Miscanthus RhizosphereVGPFAGAVIAASVYELLYLRPPRPEPVGPPETGVEEPGAGEAALS
Ga0206356_1006131213300020070Corn, Switchgrass And Miscanthus RhizosphereVWYVGPLAGGVIAASVYELLYLRPARPDPVGSPNSGVDEPGVGEAALS
Ga0206352_1048024213300020078Corn, Switchgrass And Miscanthus RhizosphereWYVGPLAGAVIAASLYELLYLRPERPTPVGPAESGVEEPGVGRAALS
Ga0210378_1032130423300021073Groundwater SedimentIWYLGPLVGGGLAALAYELLYLRPLRPVPVGPPETGIEEPRPGDAAVS
Ga0213874_1018942213300021377Plant RootsPLAGAVIAAALYELLYLRPTQPAVVGTPEAPVDEPAAGEAALS
Ga0222624_150120523300021951Groundwater SedimentYVGPVAGATLAALVYEYLYLRPPRPIPVGPPDTGVIEPRPGDAAVS
Ga0222622_1052770813300022756Groundwater SedimentWYVGPAIGAVAAAWLYEYLYLRPLSPEPVGPPETGLDEPGPGRAAAT
Ga0179589_1023496723300024288Vadose Zone SoilAWIWYVGPVAGATLAALAYEYLYLRPPRPLPVGPPDTGVIEPRPGDAAVS
Ga0247666_100704013300024323SoilKHFWIWYIGPFAGAVIAASLYELLYLRPARPEPVGPSETGVEEPGAGEAAIS
Ga0207647_1008590643300025904Corn RhizosphereVYWVGPLIGGGLAALAYDRLYLRPASPEPVGPPETGLDEPGAGEAATL
Ga0207684_1021538543300025910Corn, Switchgrass And Miscanthus RhizospherePISAIGAALAALTYEWLYLRPLSPEVVGPPETGIEEPAAGRAATE
Ga0207671_1093716513300025914Corn RhizosphereAVIAASLYELLYLRPERPTPVGPAESGVEEPGVGRAALS
Ga0207693_1026812933300025915Corn, Switchgrass And Miscanthus RhizosphereIYYLGPALGAVIAALAYEYLYLRPLAPEPVGPPETGIEEPRPGDAAVS
Ga0207649_1011380713300025920Corn RhizosphereYWVGPLLGAGIAALAYHHLYLRTLSLEPPGPPETGLEEPRPGDAASI
Ga0207664_1077948513300025929Agricultural SoilLPISHFWVWYVGPLAGGVIAACVYELLYLRPQRPVPVGPPESGVEEPGAGEAALS
Ga0207640_1128580913300025981Corn RhizosphereVWYVGPLAGGVIAASVYELLYLRPSRPAPVGPPETGVEEPGAGEAALS
Ga0207678_1111491723300026067Corn RhizosphereGPLAGAVIAASLYELLYLRPERPDPVGPPESGVEEPGVGKAALS
Ga0207648_1092390233300026089Miscanthus RhizosphereYLGPAIGAVAAALVYEYLYLRPASPEPVGPPETGVEEPGAGETATA
Ga0209153_109296213300026312SoilWWVWYAGPVVGACVAALTYEWLYLRMRPLPVGPPESGVIEPRPGETAVT
Ga0209801_136422623300026326SoilSWVWYVGPLAGGAIAALLYEALYLGPPKPEPVGPPETGVEEAAPGTAALE
Ga0209577_1068324613300026552SoilSQGWIYWIGPAIGALIAALGYEWLYLRPLAPAVVGPPETGVEEPRPGDAAAG
Ga0209590_1051396323300027882Vadose Zone SoilANCWVWYAGPLVGGAIAALAYEYLYLRPLAPVPVGPPETGVQEPRPGDTAAS
Ga0307309_1018425913300028714SoilAWVWYVGPVIGAVIAVLAYEWLYLRPVEPEPVGPPETGVEEPAPGRAAT
Ga0307298_1014827413300028717SoilGPQLVQNVWGSGWVWYLGPALGGVLAALAYEWLYLRPLSPEPVGPPETGVEEPAPGQAAT
Ga0307298_1027553913300028717SoilYVGPVIGAVIAVLAYEWLYLRPVEPEPVGPPETGVEEPAPGRAAT
Ga0307282_1038347623300028784SoilNGWIWYIGPLIGGGAAALAYEFLYLRPLRPVPVGPPETGIEEPRPGDAAVS
Ga0307323_1008567933300028787SoilAWVWYAGPFIGAALAALVYDTLYLRVQRPLLPVGPPDSGVIEPRPGDTAVS
Ga0307299_1018496423300028793SoilLVGGYWANGWVWYVGPVVGGTIAALLYEWLYLRPLAPVPVGPAETGVLEPRPGDAAAS
Ga0307284_1002408013300028799SoilWVWYAGPFVGGVLAALAYEYLYLRSPRPLPVGPPDSGVIEPRPGDAALS
Ga0307305_1002918813300028807SoilDAWVWYAGPFLGAALAALVYDTLYLRVQRPLLPVGPPDTGVIEPRPGDAAAS
Ga0307305_1051531123300028807SoilVQNVWSNAWVWYVGPAIGAVAAALLYEYLYLRPLSPEPVGPPETGLDEPGPGRAAAT
Ga0307292_1032584613300028811SoilGPFVGGALAALVYDTLYLRSPRPVVPVGPPDTGVIEPRPGDAAVS
Ga0307302_1052943823300028814SoilWSDFWVWYLGPLAGGALAALAYDRLYLRPLAPEPVGPPETGVLEPRPGDAALS
Ga0307296_1062170613300028819SoilWVWYVGPLLGGAAAALAYQWLYLRPGAPGIVSSAEGLDEPRPGDAAAR
Ga0307310_1057873623300028824SoilWTDAWVWYAGPFVGAVLAALAYDTLYLRTRRPLSPVGTPETGVIEPRPGDAALS
Ga0307312_1074209113300028828SoilWTDAWVWYAGPFLGGALAALVYDTLYLRAQRPLLPVGPPDTGVIEPRPGDAAAS
Ga0307312_1111059213300028828SoilWVWYAGPFVGAALAALLYDMLYLRVQKPLLPVGTPETGVIEPRPGDAAVS
Ga0307312_1117878223300028828SoilWAWYVGPFVGGALAALVYDTLYLRTPRPLLPVGPPDSGVAEPRPGDTAAS
Ga0307289_1032283013300028875SoilVGPFAGGVIAAVAYEFLYLRPVAPAVVGPPETGVEEPRPGDTALS
Ga0307277_1003305423300028881SoilAGPIVGAVLAAFAYEWLYLRPPAPVPVGPPETGVLEPRPGDTAVS
Ga0307308_1009625823300028884SoilHWTDAWVWYAGPFVGAVLAALAYDTLYLRTRRPLSPVGTPETGVIEPRPGDAALS
Ga0302179_1032549023300030058PalsaQLVGDHWANGWVWYVGPVLGAAVAGLLYEFLYLRPAASEQTGPPETGVLEPGISSDPAAS
Ga0307408_10070356923300031548RhizosphereWIWYVGPAVGAVAAALAYEHLYLRPLAPVPVGPPETGVEEPRPGDTAAS
Ga0310686_11300355713300031708SoilHWANGWVWYAGPLLGGAVAALLYEFLYLRPVAPEPVGPAETGVREPRPGDAATS
Ga0307407_1078563523300031903RhizosphereDFWVWYIGPFAGAVIAAVVYDLLYLRPPRPVPVGPPETGLEEPRPGDAALE
Ga0308175_10233325323300031938SoilSRHWSDAWVWYAGPLVGGALAALAYEWLYLRPPVPIPVGPPETGVIEPRPGDTAVS
Ga0308176_1192982213300031996SoilGPLAGGVIAASVYELLYLRPSRPAPVGPAETGVEEPGAGEAALS
Ga0307414_1122493813300032004RhizosphereVDRALVGGALAALLYEYLYLRPVSPEPVGPPETGLEEPRPGNAAAM
Ga0310906_1003326953300032013SoilWVWWVGPLVGGALAALLYEYLYLRPVSPEPVGPPETGLDEPVPGDTATT
Ga0334913_082837_521_6763300034172Sub-Biocrust SoilDAWVWYLGPLAGGAAAALLYEALYLRPLRPVPVGPPETGVEEPGAGEAARS

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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