Metagenome / Metatranscriptome Family F038032

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F038032
Family Type	Metagenome / Metatranscriptome
Number of Sequences	166
Average Sequence Length	39 residues
Representative Sequence	MFVGRFFGKTGRGLAVAAAILAAIGLTTVPRPADAGGGW
Number of Associated Samples	94
Number of Associated Scaffolds	166

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	92.17 %
% of genes from short scaffolds (< 2000 bps)	85.54 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (51.807 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (66.265 % of family members)
Environment Ontology (ENVO)	Unclassified (85.542 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (67.470 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 38.81% β-sheet: 0.00% Coil/Unstructured: 61.19%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 166 Family Scaffolds
PF04392	ABC_sub_bind	1.81
PF13676	TIR_2	1.20
PF01177	Asp_Glu_race	1.20
PF11746	DUF3303	0.60
PF12773	DZR	0.60
PF02371	Transposase_20	0.60
PF04972	BON	0.60
PF00872	Transposase_mut	0.60
PF00378	ECH_1	0.60
PF09286	Pro-kuma_activ	0.60
PF12840	HTH_20	0.60
PF16576	HlyD_D23	0.60
PF00072	Response_reg	0.60
PF01135	PCMT	0.60
PF01007	IRK	0.60

COG ID	Name	Functional Category	% Frequency in 166 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	1.81
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	0.60
COG2518	Protein-L-isoaspartate O-methyltransferase	Posttranslational modification, protein turnover, chaperones [O]	0.60
COG2519	tRNA A58 N-methylase Trm61	Translation, ribosomal structure and biogenesis [J]	0.60
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.60
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.60
COG4122	tRNA 5-hydroxyU34 O-methylase TrmR/YrrM	Translation, ribosomal structure and biogenesis [J]	0.60
COG4934	Serine protease, subtilase family	Posttranslational modification, protein turnover, chaperones [O]	0.60

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	51.81 %
Unclassified	root	N/A	48.19 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	51.81 %
Unclassified	root	N/A	48.19 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	51.81 %
Unclassified	root	N/A	48.19 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.19 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	43.37 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.19 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	34.34 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.41 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.19 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	10.84 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.81 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.81 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.20 %
Neisseriales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.19 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	10.84 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1.81 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	1.20 %
Chromobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales → Chromobacteriaceae	0.60 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.19 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	10.84 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1.81 %
Noviherbaspirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Noviherbaspirillum	1.20 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.60 %
Chromobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales → Chromobacteriaceae	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.19 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	10.84 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1.81 %
Noviherbaspirillum denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Noviherbaspirillum → Noviherbaspirillum denitrificans	1.20 %
Bradyrhizobium archetypum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium archetypum	0.60 %
Chromobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales → Chromobacteriaceae	0.60 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005764\|Ga0066903_105766973	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300005764\|Ga0066903_107748417	Not Available	552	Open in IMG/M
3300010048\|Ga0126373_10814064	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	996	Open in IMG/M
3300010048\|Ga0126373_11408177	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	763	Open in IMG/M
3300010048\|Ga0126373_12293002	Not Available	600	Open in IMG/M
3300010162\|Ga0131853_11334111	Not Available	529	Open in IMG/M
3300010358\|Ga0126370_11192651	Not Available	707	Open in IMG/M
3300010361\|Ga0126378_10209467	All Organisms → cellular organisms → Bacteria	2029	Open in IMG/M
3300010361\|Ga0126378_11716776	Not Available	714	Open in IMG/M
3300010361\|Ga0126378_12338510	Not Available	610	Open in IMG/M
3300010361\|Ga0126378_12455552	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	595	Open in IMG/M
3300010366\|Ga0126379_12965672	Not Available	568	Open in IMG/M
3300010376\|Ga0126381_100759419	All Organisms → cellular organisms → Bacteria	1390	Open in IMG/M
3300010376\|Ga0126381_103112332	Not Available	657	Open in IMG/M
3300010398\|Ga0126383_11861616	All Organisms → cellular organisms → Bacteria → Proteobacteria	690	Open in IMG/M
3300012989\|Ga0164305_10139038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1630	Open in IMG/M
3300016270\|Ga0182036_10663683	Not Available	841	Open in IMG/M
3300016270\|Ga0182036_11537651	Not Available	559	Open in IMG/M
3300016294\|Ga0182041_11453805	All Organisms → cellular organisms → Bacteria → Proteobacteria	630	Open in IMG/M
3300016319\|Ga0182033_10492891	Not Available	1051	Open in IMG/M
3300016357\|Ga0182032_10805206	Not Available	794	Open in IMG/M
3300016357\|Ga0182032_11148510	Not Available	667	Open in IMG/M
3300016371\|Ga0182034_10043990	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales → Chromobacteriaceae	2903	Open in IMG/M
3300016371\|Ga0182034_10083320	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2236	Open in IMG/M
3300016387\|Ga0182040_10210227	All Organisms → cellular organisms → Bacteria → Proteobacteria	1437	Open in IMG/M
3300016387\|Ga0182040_10394684	All Organisms → cellular organisms → Bacteria → Proteobacteria	1084	Open in IMG/M
3300016404\|Ga0182037_10109277	Not Available	2008	Open in IMG/M
3300016445\|Ga0182038_11621350	Not Available	582	Open in IMG/M
3300021088\|Ga0210404_10213902	Not Available	1037	Open in IMG/M
3300021560\|Ga0126371_13596280	Not Available	523	Open in IMG/M
3300025915\|Ga0207693_10124014	All Organisms → cellular organisms → Bacteria → Proteobacteria	2030	Open in IMG/M
3300027874\|Ga0209465_10474735	Not Available	625	Open in IMG/M
3300030967\|Ga0075399_11004757	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	570	Open in IMG/M
3300031474\|Ga0170818_111629374	Not Available	718	Open in IMG/M
3300031543\|Ga0318516_10136669	All Organisms → cellular organisms → Bacteria	1404	Open in IMG/M
3300031543\|Ga0318516_10242989	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1041	Open in IMG/M
3300031543\|Ga0318516_10430998	All Organisms → cellular organisms → Bacteria	759	Open in IMG/M
3300031543\|Ga0318516_10721201	All Organisms → cellular organisms → Bacteria → Proteobacteria	565	Open in IMG/M
3300031544\|Ga0318534_10399115	Not Available	790	Open in IMG/M
3300031545\|Ga0318541_10073470	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1798	Open in IMG/M
3300031545\|Ga0318541_10079745	Not Available	1730	Open in IMG/M
3300031545\|Ga0318541_10153214	Not Available	1265	Open in IMG/M
3300031545\|Ga0318541_10258273	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	968	Open in IMG/M
3300031545\|Ga0318541_10312313	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	876	Open in IMG/M
3300031546\|Ga0318538_10379267	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	764	Open in IMG/M
3300031546\|Ga0318538_10500561	Not Available	658	Open in IMG/M
3300031549\|Ga0318571_10340765	Not Available	573	Open in IMG/M
3300031549\|Ga0318571_10428820	Not Available	521	Open in IMG/M
3300031561\|Ga0318528_10068862	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1819	Open in IMG/M
3300031561\|Ga0318528_10069307	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1813	Open in IMG/M
3300031561\|Ga0318528_10313567	Not Available	842	Open in IMG/M
3300031572\|Ga0318515_10127708	Not Available	1347	Open in IMG/M
3300031572\|Ga0318515_10776031	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	506	Open in IMG/M
3300031573\|Ga0310915_10095533	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1999	Open in IMG/M
3300031573\|Ga0310915_10382541	All Organisms → cellular organisms → Bacteria → Proteobacteria	999	Open in IMG/M
3300031640\|Ga0318555_10130984	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1337	Open in IMG/M
3300031640\|Ga0318555_10308331	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	857	Open in IMG/M
3300031668\|Ga0318542_10218467	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	964	Open in IMG/M
3300031668\|Ga0318542_10450014	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	667	Open in IMG/M
3300031679\|Ga0318561_10018151	All Organisms → cellular organisms → Bacteria	3223	Open in IMG/M
3300031679\|Ga0318561_10211587	Not Available	1053	Open in IMG/M
3300031681\|Ga0318572_10580675	Not Available	668	Open in IMG/M
3300031682\|Ga0318560_10187734	Not Available	1102	Open in IMG/M
3300031719\|Ga0306917_10004498	All Organisms → cellular organisms → Bacteria	7355	Open in IMG/M
3300031719\|Ga0306917_10133103	Not Available	1826	Open in IMG/M
3300031719\|Ga0306917_10183832	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1573	Open in IMG/M
3300031719\|Ga0306917_10307050	All Organisms → cellular organisms → Bacteria → Proteobacteria	1226	Open in IMG/M
3300031719\|Ga0306917_11066101	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	630	Open in IMG/M
3300031723\|Ga0318493_10738253	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium archetypum	553	Open in IMG/M
3300031724\|Ga0318500_10041868	All Organisms → cellular organisms → Bacteria	1904	Open in IMG/M
3300031736\|Ga0318501_10134722	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1260	Open in IMG/M
3300031744\|Ga0306918_10435626	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1023	Open in IMG/M
3300031747\|Ga0318502_10099604	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1610	Open in IMG/M
3300031747\|Ga0318502_10325608	Not Available	906	Open in IMG/M
3300031747\|Ga0318502_10915044	Not Available	533	Open in IMG/M
3300031753\|Ga0307477_10734412	All Organisms → cellular organisms → Bacteria → Proteobacteria	659	Open in IMG/M
3300031763\|Ga0318537_10098585	All Organisms → cellular organisms → Bacteria	1081	Open in IMG/M
3300031765\|Ga0318554_10322362	Not Available	879	Open in IMG/M
3300031768\|Ga0318509_10228580	Not Available	1037	Open in IMG/M
3300031768\|Ga0318509_10243677	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1003	Open in IMG/M
3300031768\|Ga0318509_10594961	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	616	Open in IMG/M
3300031771\|Ga0318546_10195093	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1381	Open in IMG/M
3300031777\|Ga0318543_10245121	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	799	Open in IMG/M
3300031779\|Ga0318566_10105272	All Organisms → cellular organisms → Bacteria → Proteobacteria	1386	Open in IMG/M
3300031780\|Ga0318508_1075411	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	917	Open in IMG/M
3300031781\|Ga0318547_10536456	Not Available	724	Open in IMG/M
3300031781\|Ga0318547_10731473	Not Available	615	Open in IMG/M
3300031792\|Ga0318529_10540480	Not Available	541	Open in IMG/M
3300031793\|Ga0318548_10062428	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1729	Open in IMG/M
3300031793\|Ga0318548_10120607	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1267	Open in IMG/M
3300031793\|Ga0318548_10298167	Not Available	792	Open in IMG/M
3300031796\|Ga0318576_10155508	Not Available	1067	Open in IMG/M
3300031796\|Ga0318576_10395689	Not Available	653	Open in IMG/M
3300031797\|Ga0318550_10455908	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	618	Open in IMG/M
3300031819\|Ga0318568_10299557	Not Available	998	Open in IMG/M
3300031821\|Ga0318567_10049407	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2169	Open in IMG/M
3300031833\|Ga0310917_11132651	Not Available	522	Open in IMG/M
3300031835\|Ga0318517_10027940	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2241	Open in IMG/M
3300031846\|Ga0318512_10161542	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1085	Open in IMG/M
3300031846\|Ga0318512_10221891	All Organisms → cellular organisms → Bacteria → Proteobacteria	928	Open in IMG/M
3300031879\|Ga0306919_10432628	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1011	Open in IMG/M
3300031880\|Ga0318544_10448789	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	502	Open in IMG/M
3300031890\|Ga0306925_11349254	Not Available	706	Open in IMG/M
3300031890\|Ga0306925_11636059	Not Available	624	Open in IMG/M
3300031890\|Ga0306925_12238901	Not Available	507	Open in IMG/M
3300031893\|Ga0318536_10426759	Not Available	669	Open in IMG/M
3300031896\|Ga0318551_10378919	Not Available	803	Open in IMG/M
3300031896\|Ga0318551_10939919	Not Available	505	Open in IMG/M
3300031897\|Ga0318520_10408172	Not Available	831	Open in IMG/M
3300031897\|Ga0318520_10454581	Not Available	787	Open in IMG/M
3300031910\|Ga0306923_10497099	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1380	Open in IMG/M
3300031910\|Ga0306923_10806258	Not Available	1036	Open in IMG/M
3300031912\|Ga0306921_10547446	Not Available	1342	Open in IMG/M
3300031912\|Ga0306921_10872395	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1023	Open in IMG/M
3300031941\|Ga0310912_10455987	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	997	Open in IMG/M
3300031942\|Ga0310916_10299558	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1361	Open in IMG/M
3300031945\|Ga0310913_10560993	All Organisms → cellular organisms → Bacteria	810	Open in IMG/M
3300031947\|Ga0310909_10207032	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1631	Open in IMG/M
3300031947\|Ga0310909_10218760	All Organisms → cellular organisms → Bacteria	1586	Open in IMG/M
3300031947\|Ga0310909_11042102	Not Available	667	Open in IMG/M
3300031954\|Ga0306926_11593350	Not Available	749	Open in IMG/M
3300031954\|Ga0306926_12172230	Not Available	619	Open in IMG/M
3300031959\|Ga0318530_10060033	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Noviherbaspirillum → Noviherbaspirillum denitrificans	1452	Open in IMG/M
3300031962\|Ga0307479_11264731	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	700	Open in IMG/M
3300032009\|Ga0318563_10096388	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1560	Open in IMG/M
3300032010\|Ga0318569_10462267	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	592	Open in IMG/M
3300032041\|Ga0318549_10050013	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Noviherbaspirillum → Noviherbaspirillum denitrificans	1722	Open in IMG/M
3300032041\|Ga0318549_10092766	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1308	Open in IMG/M
3300032041\|Ga0318549_10389910	Not Available	628	Open in IMG/M
3300032044\|Ga0318558_10160305	Not Available	1086	Open in IMG/M
3300032044\|Ga0318558_10281555	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	821	Open in IMG/M
3300032055\|Ga0318575_10241725	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	910	Open in IMG/M
3300032055\|Ga0318575_10513339	Not Available	608	Open in IMG/M
3300032059\|Ga0318533_10033599	All Organisms → cellular organisms → Bacteria	3343	Open in IMG/M
3300032059\|Ga0318533_10037727	All Organisms → cellular organisms → Bacteria	3165	Open in IMG/M
3300032059\|Ga0318533_10114829	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1878	Open in IMG/M
3300032059\|Ga0318533_10145999	Not Available	1671	Open in IMG/M
3300032059\|Ga0318533_10237792	All Organisms → cellular organisms → Bacteria	1312	Open in IMG/M
3300032059\|Ga0318533_10693212	Not Available	747	Open in IMG/M
3300032059\|Ga0318533_10825869	Not Available	680	Open in IMG/M
3300032059\|Ga0318533_11002302	Not Available	612	Open in IMG/M
3300032059\|Ga0318533_11454996	Not Available	500	Open in IMG/M
3300032065\|Ga0318513_10283297	Not Available	804	Open in IMG/M
3300032066\|Ga0318514_10309672	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	835	Open in IMG/M
3300032068\|Ga0318553_10272208	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	885	Open in IMG/M
3300032076\|Ga0306924_10461891	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1449	Open in IMG/M
3300032076\|Ga0306924_11989378	Not Available	599	Open in IMG/M
3300032091\|Ga0318577_10148755	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1114	Open in IMG/M
3300032094\|Ga0318540_10644689	Not Available	510	Open in IMG/M
3300032261\|Ga0306920_101835412	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	854	Open in IMG/M
3300033289\|Ga0310914_10267642	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1538	Open in IMG/M
3300033289\|Ga0310914_11174402	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	669	Open in IMG/M
3300033290\|Ga0318519_10809409	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	576	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.40%
Host-Associated	Host-Associated	0.60%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.40%
Arthropoda	Host-Associated → Arthropoda	0.60%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	99.40%
Digestive System	Host-Associated → Arthropoda → Digestive System	0.60%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	96.99%
Loam	Environmental → Terrestrial → Soil → Loam	2.41%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	0.60%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	88.55%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	8.43%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.60%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	0.60%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	66.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	20.48%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.81%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.60%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.60%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.60%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	0.60%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010162	Labiotermes labralis P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Lab288 P1 (version 2)	Host-Associated	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300030967	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA11 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066903_1057669731	3300005764	Tropical Forest Soil	MTVRRFLGKTGRGLTVAAAILAVIGLTAVPRRADAGGGWGGGW
Ga0066903_1077484172	3300005764	Tropical Forest Soil	MTVISFFARTGRGLAVAAAIVAAIGLTALPRPADAGGGWGG
Ga0126373_108140642	3300010048	Tropical Forest Soil	MFVGRFFGKTDRVLAVTAAILAVVGLTTVSRPADAGGGWG
Ga0126373_114081771	3300010048	Tropical Forest Soil	MTVISFFERTGRGLAVAAAILTAIGVTTVPRPADAGGGWGGGISPGAA
Ga0126373_122930021	3300010048	Tropical Forest Soil	MTVDRFFGKTGRGLAIAAAILAAIGLTTVPRPADAGGGW
Ga0131853_113341112	3300010162	Termite Gut	MIVGRLFGKTGRGLTVTAAILAAIGLTTVPRPADAGGGWG
Ga0126370_111926511	3300010358	Tropical Forest Soil	MTIVRFAGKTSRDLAVAVAILAAIGLTRVPRPADAGGWGGGGISPGAAVAL
Ga0126378_102094671	3300010361	Tropical Forest Soil	MIAFFGKTGRGLAVAAAILAAIGLTTAPRPADAGGGWGGG
Ga0126378_117167762	3300010361	Tropical Forest Soil	MTVDRFFGKTGRGLAVAAAILAAIGLTTVPRPADAGGGWGGG
Ga0126378_123385101	3300010361	Tropical Forest Soil	MIVGRLFGKTGRGLAVAAAILAAIGLTTVPRPADAGGGW
Ga0126378_124555521	3300010361	Tropical Forest Soil	MTVISFFERTGRGLAIAAAIFAAIGVTTLPRPADAGGGWG
Ga0126379_129656721	3300010366	Tropical Forest Soil	MTVGRFFVKTGRGLAIAAAILVAVGLTTAPRPADAGGWGGGGI
Ga0126381_1007594191	3300010376	Tropical Forest Soil	MSFGRFFGKPGRGLAVAAAILAAIGLTTMPRPADAGGGW
Ga0126381_1031123321	3300010376	Tropical Forest Soil	MTVDRFFGKTGRGLAVTVAILAVVGLTTAPRPAHAGG
Ga0126383_118616161	3300010398	Tropical Forest Soil	MTVGKFFGKTGRGLAAAAILSIIGLTALPQPADAGEGWGGGGISPGAA
Ga0164305_101390381	3300012989	Soil	MSVGRFFGKTSPGLAVTAAILAAIGLPTVPRPADAGGGWVGVGSALV
Ga0182036_106636831	3300016270	Soil	MTVGRLFGKTGRGLVVAAAILAAIGLTTVPRPADAGG
Ga0182036_115376511	3300016270	Soil	MTIGRFFGKTSRALAVAAAILAAIGLTAVPRPADAGGGWGG
Ga0182041_114538051	3300016294	Soil	MTVGRFFGKTGRGLAVVAIFAATGLTTEPRPADAGG
Ga0182033_104928913	3300016319	Soil	MTAGRFFGTTGRGLAVAAILAAIGLTTVPRPADAGGGWGG
Ga0182032_108052061	3300016357	Soil	MTVGRNSGKTGRRLAAGAAILAAVGLTTLPRPADA
Ga0182032_111485101	3300016357	Soil	MTGGRFFEKTGRGLTAAAAILAAVGLTTVPRPADAGGWGGGG
Ga0182034_100439908	3300016371	Soil	MTSGRFFGKTSRTLAVAAAILAAVGLTTLPKPADA
Ga0182034_100833201	3300016371	Soil	MIVGRFFGKTGRGLATAAAIFAAIGLTTVPRPADAGGVWGGGGISPGAA
Ga0182040_102102273	3300016387	Soil	MIVGRFFGKTGRGLAVAAAILAAIGLTTVPRPAGAG
Ga0182040_103946841	3300016387	Soil	MFVGRFFGKTGRGLAVAAAILAAIGLTTLPRPADAGGG
Ga0182037_101092771	3300016404	Soil	MTVGRLFGKTGRGLVFAAAILAAIGLTTVPRPADAGGG
Ga0182037_114632732	3300016404	Soil	MIARFIGKIGRPLATAAAILAVIGLATVPRPADAGGGW
Ga0182038_101297041	3300016445	Soil	MIGRFIGKIGRPLATAAAILAVIGLATVPRPADAGGGWGG
Ga0182038_116213502	3300016445	Soil	MTVGRFFGKTSRVLAVAAAILAAVGLTAVPRPADAGGGWGGG
Ga0210404_102139023	3300021088	Soil	MIVGRFFGKTGRGLAIAAAILAAIGLTTVPRPAYAGGGW
Ga0126371_135962801	3300021560	Tropical Forest Soil	MMVGRFFGKAGRGLAVAAAIVATIGLTTLPHPANAGGG
Ga0207693_101240143	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MIVGRFFGKTGRGLAIAAAILAAIGLTTVPRPAYAGGG
Ga0209465_104747351	3300027874	Tropical Forest Soil	MMLGNFLGKTGRGLAVAAAILAAVGLTTAPRPAHAGGIGPGA
Ga0075399_110047572	3300030967	Soil	MTVRRFSGKTGRGLAAAAAILAAIGSATVPRPADAG
Ga0170818_1116293741	3300031474	Forest Soil	MIVGRFFGKTGWRLAVAAALLATIGLTTVPRPADAGGGWG
Ga0318516_101366691	3300031543	Soil	MKVGRFFFGKTGRALAVTAAILAGIGLTTVPRSATAGGGW
Ga0318516_102429892	3300031543	Soil	MIVGRFFGKTGRGLAATAAILTAIGLTTVPRPADAGGGWGG
Ga0318516_104309982	3300031543	Soil	MTSGRFFGKTRRTLAVAAAILAAVGLTTLPEPADAGGGGISPS
Ga0318516_107212012	3300031543	Soil	MTVCKFFGRTGRGLAVAAAILAAIGLTTVPRPADAGEGWHGGGISPGAAVGI
Ga0318534_103991152	3300031544	Soil	MTVRRFFGRTSRKLAVAATILAAIGLTTAPRPADAGG
Ga0318534_106420321	3300031544	Soil	MMFGRLLEKTGRGLAVATALVAAVGLTTVPRPADAG
Ga0318541_100734701	3300031545	Soil	MIVGRFFGKTGRGLAATAAILTAIGLTTVPRPADAGGG
Ga0318541_100797451	3300031545	Soil	MTVRRFFGRTSRKLAVAATILAAIGLTTAPRPADAGGGW
Ga0318541_101532143	3300031545	Soil	MIVGKFFGKTGRGLTITAAILAAIGLTAVPRPADAGGGW
Ga0318541_102191761	3300031545	Soil	MAVDRFFRKTGRGLAVAAAILAAIGLTTAPRPADAGGWGGDQTSELVSEIPQIPC
Ga0318541_102582731	3300031545	Soil	MKVGRFFFGKTGRGLAVTAAILAAIGLTTVPRPATAGG
Ga0318541_103123131	3300031545	Soil	MIVGRFFGKTGRGLATAAAILAAIGLTTVPRAADAGGWGGGGISPGAAV
Ga0318538_103792673	3300031546	Soil	MTVNRFFRKTGRGLATAAAVLTAIGLTTVPRPADAGGGW
Ga0318538_105005612	3300031546	Soil	MIVARFFGKTGRGLAVAASILAAIGLTTVPRPADAGGGWVGGGIS
Ga0318571_103407652	3300031549	Soil	MTIGRFFGKTSRALAVAAAILAAIGLTAVPRPADA
Ga0318571_104288201	3300031549	Soil	MKVGRFFFGKTGRGLAVTAAILAAIGLTTVPRPATAGGGW
Ga0318528_100688625	3300031561	Soil	MTVGRIFGKTGRGLAVAAAILAAIGLTTVPRPAEAGGG
Ga0318528_100693074	3300031561	Soil	MIVGRLFGKTGRGLAATAAILTAIGLTTVPRPADAGGG
Ga0318528_103135672	3300031561	Soil	MIVGRFFGKTGRGLATAAAILAAIGLTTVPRPADA
Ga0318515_101277083	3300031572	Soil	MTVRRFFGRTSRKLAVAATILAAIGLTTAPRPADAGGGWGGGAISPGA
Ga0318515_107760312	3300031572	Soil	MTVGRIFGKTGRGLAVAAAILAAIGLTTVPRPAEAGGGWGGG
Ga0310915_100955333	3300031573	Soil	MIVSRFFGKTGRGLAVAAAILAAIGLTAVPRPADAGGGWGGG
Ga0310915_103825411	3300031573	Soil	MIVGRFFGKTGRGLAVAAAILAAIGLTAVPRPADAGG
Ga0318555_101309842	3300031640	Soil	MTICRFFGKTVRGLAVAAAILAIIGLTTTPRPAHAGGGW
Ga0318555_103083313	3300031640	Soil	MTVGRFFRKTGRGLAMATAILAAIGLTTVPRPADAGG
Ga0318542_102184673	3300031668	Soil	MKVGRFFFGKTGRGLAVTAAILAAIGLTTVPRPATAGGGWSGGG
Ga0318542_104500142	3300031668	Soil	MIVGRFFGKTVRGVAATAAILTAIGLTTVPRPADAGGGWGG
Ga0318561_100181515	3300031679	Soil	MTVDRFFGKTGRRLAIAAAILAVIGLTTAPRPADAG
Ga0318561_102115871	3300031679	Soil	MIVSRFFGKTGRGLTITTAILAAIGLTAVPRPADAGGGW
Ga0318561_108158122	3300031679	Soil	VGRLFGKSSRGLAVAIAMLAAIGLTTIPRPAAAGGGW
Ga0318572_105806751	3300031681	Soil	LTVRWFFGKTGRGLAVAVAILTAIGLTTVPQPADAGGGWG
Ga0318560_101877342	3300031682	Soil	MTVRRFFGRTSRKLAVAATILAAIGLTTAPRPADA
Ga0306917_1000449814	3300031719	Soil	MIVGKFFGKTGRGLTITTAILAAIGLTAVPRPADAGGG
Ga0306917_101331034	3300031719	Soil	MTVNRFFGKTGRGLAVAAAILAALGLTTVPRPADAGGGWGG
Ga0306917_101838321	3300031719	Soil	MKVGRFFFGKTGRGLAVTAAILAGIGLTTVPRPATAGG
Ga0306917_103070502	3300031719	Soil	MIVARFFGKTGRGLAVAASILAAIGLTTVPRPADAGGGWG
Ga0306917_110661011	3300031719	Soil	MTVNTSFRKTGRGLAVAAAILAAIGLTTVPRPADAGGGW
Ga0318493_107382531	3300031723	Soil	MTIGKTGRGLAVAAAILAAVGLATASRPADAGGGW
Ga0318500_100418681	3300031724	Soil	MTICRFFGKTVRGLAVAAAILAIIGLTTTPRPAHAG
Ga0318501_101347221	3300031736	Soil	MIVSRFFGKTGRGLAVAAAILAAIGLTAVPRPADAGGGW
Ga0306918_104356263	3300031744	Soil	MIVGRFFGKTGRGLAATAAILTAIGLTTVPRPADAGGGW
Ga0318502_100996043	3300031747	Soil	MIVGRFFGKTGRGLATAAAILAAIGLTTVPRPADAGGG
Ga0318502_103256081	3300031747	Soil	MKVGRFFFGKTGRALAVTAAILAGIGLTTVPRSATAGGGWGG
Ga0318502_109150441	3300031747	Soil	MIVSRFFGKTGRGLAVAAAILAAIGLTAVPRPADAGG
Ga0318494_103699741	3300031751	Soil	MIGRFIGKIGRPLATAAAILAVIGLATVPRPADAGGGW
Ga0307477_107344121	3300031753	Hardwood Forest Soil	MIVSRFFGKTGRGLAVAAAILVAIGLTTVPRPADAG
Ga0318537_100985851	3300031763	Soil	MTVDRFFWKTGRRLAIATAILAVIGLTTAPRPADAGGGW
Ga0318535_103476472	3300031764	Soil	MIGRFIGKIGRPLATAAAILAVIGLATVPRPADAG
Ga0318554_103223622	3300031765	Soil	MTVRRFFGRTSRKLAVAATILAAIGLTTAPRPADAGGG
Ga0318509_102285802	3300031768	Soil	MTVRRFFGRTSRKLAVAATILAAIGLTTAPRPADAGGGWGG
Ga0318509_102436771	3300031768	Soil	MKVGRFFFGKTGRGLAVTAAILAAIGLTTVPRPAT
Ga0318509_105949611	3300031768	Soil	MTIGRFFGKTGRGLAVAAAILAAIGSTTVPRPAVA
Ga0318546_101950934	3300031771	Soil	MIVGRFFGKTGRGLATAAAILAAIGLTTVPRPADAGGGWGGG
Ga0318543_102451213	3300031777	Soil	MTIGRFFGKTGRGLAVAAAILAAIGSTTVPRPADAGGWGGGGISP
Ga0318566_101052723	3300031779	Soil	MIVARFFGKTGRGLAVAASILAAIGLTTVPRPADAG
Ga0318508_10754112	3300031780	Soil	MKVGRFFFGKTGRGLAVTAAILAAIGLTTVPRPATA
Ga0318547_105364561	3300031781	Soil	MIVAKFFGKTGRGFAAAAAILAAIGLTTVPRPADAGGGGHGG
Ga0318547_107314732	3300031781	Soil	MTVDRFFWKTGRRLAIATAILAVIGLTTAPRPADAGGGWGGG
Ga0318529_105404802	3300031792	Soil	MMLGRFFGKTGRGLAVAAAILAAVGLATAPRPAHA
Ga0318548_100624281	3300031793	Soil	MIVARFFGKTGRGLAVAASILAAIGLTTVPRPADAGGGWVGG
Ga0318548_101206071	3300031793	Soil	MIVSRFFGKTGRGLAVAAAILAAIGLTAVPRPADAGGG
Ga0318548_102981671	3300031793	Soil	MIVGKFFGKTGRGLTITAAILAAIGLTAVPRPADAGGGWGGG
Ga0318576_101555081	3300031796	Soil	MIVGKYFGKTGRGLAVAVAILAAIGLTTVPRPADAGEG
Ga0318576_103956891	3300031796	Soil	MTVGRFFGKTSRVLAVAAAILAAVGLTAVPRPADAGGG
Ga0318550_104559082	3300031797	Soil	MIVGRFFGKTVRGVAATAAILTAIGLTTVPRPADAGGG
Ga0318568_102995572	3300031819	Soil	MIVGKYFGKTGRGLAVAVAILAAIGLTTVPRPADAGG
Ga0318567_100494074	3300031821	Soil	MIVGRFFGKTVRGVAATAAILTAIGLTTVPRPAVAGGGGG
Ga0310917_111326511	3300031833	Soil	MTVGRFFGKTGRGLAMATATLAAIGSATVPRPADAGG
Ga0318517_100279401	3300031835	Soil	MIVGRFFGKTGRGLATAAAILAAIGLTTVPRPADAGGGWGG
Ga0318517_101059471	3300031835	Soil	MIARFIGKIGRPLATAAAILAVIGLATVPRPADAGGGWGG
Ga0318512_101615422	3300031846	Soil	MIVGRFFGKTGRGLAATAAILTAIGLTTVPRPADA
Ga0318512_102218911	3300031846	Soil	MIVARFFGKTGRGLAVAASILAAIGLTTVPRPADAGGGWGGG
Ga0306919_104326283	3300031879	Soil	MKVGRFFFGKTGRGLAVTAAILAGIGLTTVPRPATAGGGWGG
Ga0318544_104487892	3300031880	Soil	MTVNRFFRKTGRGLGVAAAILAAIGLTTVPRPADAGGGWG
Ga0306925_113492541	3300031890	Soil	MTVAGFFGKTGRGLAVAAAILAVIGLTTAPRPAHA
Ga0306925_116360591	3300031890	Soil	MKVGRFFFGKTGRALAVTAAILAGIGLTTVPRSATAGGGWG
Ga0306925_122389011	3300031890	Soil	MTVGRFFGKTGRGLAMATAILAAIGSATVPRPADAG
Ga0318536_104267591	3300031893	Soil	MSVGRFFGKTGRGLAAAAGILAAVGLTTTPRPANAGGIGPGA
Ga0318551_103789191	3300031896	Soil	MIVAKFFGKTGRGFAAAAAILAAIGLTTVPRPADAGGGGHGSGISPG
Ga0318551_109399191	3300031896	Soil	MTVGRFFHKTGHGLAVAAAILATIGLTTAPRPAHAGGGW
Ga0318520_104081721	3300031897	Soil	MTVGRLFGKTGRGLVVAAAILAAIGLTTVPRPADAGGGWGG
Ga0318520_104545813	3300031897	Soil	MMLGRFFGKTGRGLAVAAAILAAVGLATAPRPALA
Ga0306923_104970991	3300031910	Soil	MRVGRFFFAKTGRGLAVAAVILAAIGLTTVPRPADAGGGWGGG
Ga0306923_108062581	3300031910	Soil	MIVGKFFGKTGRGLTITAAILAAIGLTAVPRPADAGGGWG
Ga0306921_105474461	3300031912	Soil	MTVGRFFGKTSRVLAVAAAILAAVGLTAVPRPADAGGGWG
Ga0306921_108723953	3300031912	Soil	MTVNTSFRKTGRGLAVAAAILAAIGLTTVPRPADAGGGWGG
Ga0310912_104559871	3300031941	Soil	MTVNTSFRKTGRGLAVAAAILAAIGLTTVPRPADAGG
Ga0310916_1001035210	3300031942	Soil	MAVDRFFRKTGRGLAVAAAILAAIGLTTAPRPADAGGWGGDQTSELVS
Ga0310916_102995581	3300031942	Soil	MKVGRFFFGKTGKALAVAVAILAAIGLTTVPRPADA
Ga0310913_105609933	3300031945	Soil	MTVDRFFGKTGRRLAIAAAILAVIGLTTAPRPADAGGGW
Ga0310909_102070323	3300031947	Soil	MIVARFFGKTGRGLAVAASILAAIGLTTVPRPADA
Ga0310909_102187601	3300031947	Soil	MKVGRFFFGKTGRALAVTAAILAGIGLTTVPRSATA
Ga0310909_110421021	3300031947	Soil	MTVSRFFRKTGRGLAMATAILAAIGLTTVPRSADAGGGGISPGAA
Ga0306926_105836911	3300031954	Soil	MIVSRLFGKAGRGLAVAAAILAVIGLATVPRPADA
Ga0306926_115933501	3300031954	Soil	MVVSRFFGKAGRVLATAAAILAAIGLTTLPRPADAG
Ga0306926_121722302	3300031954	Soil	VGRLFGKTSRGLAVAAAIFAAIGLTTLPRPAHAGGGWG
Ga0318530_100600332	3300031959	Soil	MIVSRFFGKTGRGLAVAAAILAAIGLTAVPRPADAGWGGVE
Ga0307479_112647312	3300031962	Hardwood Forest Soil	MIVGRFFGKTGRGLATAAAILAAIGLTTVPRPADAG
Ga0318531_102901631	3300031981	Soil	VGRLFGKSSRGLAVAIAMLAAIGLTTIPRPADAGGGWGG
Ga0318563_100963883	3300032009	Soil	MIVGRFFGKTGRGLAATAAILTAIGLTTVPRPADAGG
Ga0318569_104622671	3300032010	Soil	MTVNRFFRKIGRGLAVAAAILAAIGLTTVPRPADAGGGWGGG
Ga0318549_100500132	3300032041	Soil	MIVSRFFGKTGRGLAVAAAILAAIGLTAVPRPADAGGGWGG
Ga0318549_100927661	3300032041	Soil	MIVGRFFGKTVRGVAATAAILTAIGLTTVPRPADAGGGWG
Ga0318549_103899102	3300032041	Soil	MKVGRFFFGKTGRGLAVTAAILAAIGLTTVPRPATAGGGWSG
Ga0318558_101603051	3300032044	Soil	MKVGRFFFGKTGRGLAVTAAILAGIGLTTVPRPATAGGGW
Ga0318558_102815553	3300032044	Soil	MIVGRFFGKTVRGVAATAAILTAIGLTTVPRPADAGG
Ga0318506_104222673	3300032052	Soil	MIARFIGKIGRPLATAAAILAVIGLATVPRPADAGG
Ga0318575_102417251	3300032055	Soil	MIVGRFFGKTVRGVAATAAILTAIGLTTVPRPADA
Ga0318575_103480141	3300032055	Soil	MIARFIGKIGRPLATAAAILAVIGLATVPRPADAGGGWG
Ga0318575_105133392	3300032055	Soil	MFVGRFFGKTGRGLAVAAAILAAIGLTTVPRPADAGGGW
Ga0318533_100335991	3300032059	Soil	MTVNRFFRKTGRGLAVAAAILAAIGLTTLPRPADAGGGWGG
Ga0318533_100377273	3300032059	Soil	MTICRFFGKTVRGLAVAAAILAIIGLTTTPRPAHAGGGWGG
Ga0318533_101148293	3300032059	Soil	MTVVRFLERTGRGLAVAGAILAAIGVTTVPRPADAGGGWGG
Ga0318533_101459991	3300032059	Soil	MTVGRFFRKTSRALAVAAAILAAIGLTAVPRPADAGGG
Ga0318533_102377921	3300032059	Soil	MIVGKYFGKTGRGLAVAVAILAAIGLTTVPRPADAGGGWGGG
Ga0318533_106932122	3300032059	Soil	MTVDRFLGKTGRGLAVAAAILAVIGLTTTPRPAHAG
Ga0318533_108258693	3300032059	Soil	MTVGRFFVKTGRGLAIAAAILVAIGLTTAPRPADAGGGWGG
Ga0318533_110023021	3300032059	Soil	MTSGRFFGKTRRTLAVAAAILAAVGLTTLPEPADAGGGGISPGA
Ga0318533_114549962	3300032059	Soil	MTVVSFFETTGRGLAVAAAIFAAVGLTTLPRPADAGGGW
Ga0318513_102832972	3300032065	Soil	MTVRRFFGRTSRKLAVAATILAAIGLTTAPRPADAGGGWGGG
Ga0318514_103096721	3300032066	Soil	MKVGRFFFGKTGRALAVTAAILAGIGLTTVPRSATAGG
Ga0318553_102722082	3300032068	Soil	MIVGRFFGKTGRGLATAAAILAAIGLTTVPRPADAGGGWG
Ga0306924_104618911	3300032076	Soil	MTIGRFFGKTGRGLAVAAAILAAIGSTTVPRPADAGGWG
Ga0306924_119893781	3300032076	Soil	MIVAKFFGKTGRGFAAAAAILAAIGLTTVPRPADAGGG
Ga0318577_101487551	3300032091	Soil	MTVDRFFGKTGRRLAIAAAILAVIGLTTAPRPADA
Ga0318540_106446892	3300032094	Soil	MTVCKFFGRTGRGLAVAAAILAAIGLTTVPRPADAGEGWHGGG
Ga0306920_1018354123	3300032261	Soil	VTVQGFFGKTGRGLAAAAILAAVGLTTVPRPAHAGGGWGGG
Ga0310914_102676423	3300033289	Soil	MVDRFFGKAGRGLTLAATIVAAIGLTTVPHPANAGGGG
Ga0310914_111744022	3300033289	Soil	MTVNTSFRKTGRGLAVAAAILAAIGLTTVPRPADAGGGWGGG
Ga0318519_108094091	3300033290	Soil	MTVNRFFRKTGRGLGVAAAILAAIGLTTVPRPADAGGG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F038032

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences