Metagenome / Metatranscriptome Family F038060

Basic Information
Family ID	F038060
Family Type	Metagenome / Metatranscriptome
Number of Sequences	166
Average Sequence Length	69 residues
Representative Sequence	MFNGSFLRVCRILRFVKKLDFAFLSLGGPSHGARVWCLGRVPKHRNQWQEVEGLLFSPKNSQLVHILSFHS
Number of Associated Samples	80
Number of Associated Scaffolds	166

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	87.80 %
% of genes near scaffold ends (potentially truncated)	51.81 %
% of genes from short scaffolds (< 2000 bps)	98.80 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Switchgrass Phyllosphere (61.446 % of family members)
Environment Ontology (ENVO)	Unclassified (90.361 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant surface (89.759 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 10.10% β-sheet: 30.30% Coil/Unstructured: 59.60%
Feature Viewer

Powered by Feature Viewer

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Scaffold	Taxonomy	Length	IMG/M Link
3300005355\|Ga0070671_100387048	Not Available	1195	Open in IMG/M
3300005355\|Ga0070671_101510391	Not Available	594	Open in IMG/M
3300005841\|Ga0068863_101803861	Not Available	621	Open in IMG/M
3300005842\|Ga0068858_102396171	Not Available	521	Open in IMG/M
3300005843\|Ga0068860_101712470	Not Available	650	Open in IMG/M
3300005843\|Ga0068860_101717755	Not Available	649	Open in IMG/M
3300005843\|Ga0068860_101798428	Not Available	634	Open in IMG/M
3300005844\|Ga0068862_102422989	Not Available	536	Open in IMG/M
3300005844\|Ga0068862_102432123	Not Available	535	Open in IMG/M
3300009101\|Ga0105247_11400927	Not Available	566	Open in IMG/M
3300010400\|Ga0134122_12981235	Not Available	527	Open in IMG/M
3300010403\|Ga0134123_11941917	Not Available	645	Open in IMG/M
3300014968\|Ga0157379_11919014	Not Available	584	Open in IMG/M
3300015273\|Ga0182102_1010724	Not Available	739	Open in IMG/M
3300015273\|Ga0182102_1037552	Not Available	536	Open in IMG/M
3300015278\|Ga0182099_1009414	Not Available	873	Open in IMG/M
3300015278\|Ga0182099_1035116	Not Available	621	Open in IMG/M
3300015280\|Ga0182100_1039476	Not Available	689	Open in IMG/M
3300015280\|Ga0182100_1054724	Not Available	620	Open in IMG/M
3300015280\|Ga0182100_1065862	Not Available	583	Open in IMG/M
3300015284\|Ga0182101_1049630	Not Available	640	Open in IMG/M
3300015293\|Ga0182103_1010703	Not Available	990	Open in IMG/M
3300015297\|Ga0182104_1061708	Not Available	639	Open in IMG/M
3300015297\|Ga0182104_1087708	Not Available	566	Open in IMG/M
3300015297\|Ga0182104_1114069	Not Available	513	Open in IMG/M
3300015297\|Ga0182104_1119786	Not Available	503	Open in IMG/M
3300015297\|Ga0182104_1120540	Not Available	501	Open in IMG/M
3300015306\|Ga0182180_1067969	Not Available	567	Open in IMG/M
3300015306\|Ga0182180_1072017	Not Available	556	Open in IMG/M
3300015309\|Ga0182098_1117380	Not Available	519	Open in IMG/M
3300015312\|Ga0182168_1035324	Not Available	824	Open in IMG/M
3300015312\|Ga0182168_1121117	Not Available	528	Open in IMG/M
3300015313\|Ga0182164_1065373	Not Available	668	Open in IMG/M
3300015313\|Ga0182164_1104965	Not Available	559	Open in IMG/M
3300015316\|Ga0182121_1104911	Not Available	577	Open in IMG/M
3300015316\|Ga0182121_1120984	Not Available	544	Open in IMG/M
3300015317\|Ga0182136_1066013	Not Available	671	Open in IMG/M
3300015317\|Ga0182136_1115562	Not Available	545	Open in IMG/M
3300015318\|Ga0182181_1102276	Not Available	526	Open in IMG/M
3300015319\|Ga0182130_1130383	Not Available	513	Open in IMG/M
3300015320\|Ga0182165_1062161	Not Available	702	Open in IMG/M
3300015320\|Ga0182165_1101059	Not Available	585	Open in IMG/M
3300015325\|Ga0182148_1110975	Not Available	560	Open in IMG/M
3300015326\|Ga0182166_1075165	Not Available	645	Open in IMG/M
3300015326\|Ga0182166_1144060	Not Available	504	Open in IMG/M
3300015327\|Ga0182114_1043748	Not Available	834	Open in IMG/M
3300015327\|Ga0182114_1101057	Not Available	612	Open in IMG/M
3300015327\|Ga0182114_1114779	Not Available	582	Open in IMG/M
3300015328\|Ga0182153_1072699	Not Available	669	Open in IMG/M
3300015328\|Ga0182153_1104653	Not Available	585	Open in IMG/M
3300015329\|Ga0182135_1095056	Not Available	611	Open in IMG/M
3300015329\|Ga0182135_1132617	Not Available	536	Open in IMG/M
3300015329\|Ga0182135_1141265	Not Available	522	Open in IMG/M
3300015330\|Ga0182152_1100504	Not Available	599	Open in IMG/M
3300015330\|Ga0182152_1125403	Not Available	548	Open in IMG/M
3300015330\|Ga0182152_1135322	Not Available	531	Open in IMG/M
3300015331\|Ga0182131_1099525	Not Available	603	Open in IMG/M
3300015332\|Ga0182117_1046963	Not Available	842	Open in IMG/M
3300015334\|Ga0182132_1115922	Not Available	591	Open in IMG/M
3300015334\|Ga0182132_1131686	Not Available	560	Open in IMG/M
3300015334\|Ga0182132_1143653	Not Available	539	Open in IMG/M
3300015336\|Ga0182150_1057824	Not Available	756	Open in IMG/M
3300015336\|Ga0182150_1079721	Not Available	673	Open in IMG/M
3300015336\|Ga0182150_1089948	Not Available	643	Open in IMG/M
3300015337\|Ga0182151_1125421	Not Available	565	Open in IMG/M
3300015337\|Ga0182151_1139554	Not Available	541	Open in IMG/M
3300015338\|Ga0182137_1143802	Not Available	553	Open in IMG/M
3300015340\|Ga0182133_1143252	Not Available	572	Open in IMG/M
3300015348\|Ga0182115_1144602	Not Available	761	Open in IMG/M
3300015348\|Ga0182115_1170208	Not Available	698	Open in IMG/M
3300015348\|Ga0182115_1198806	Not Available	642	Open in IMG/M
3300015349\|Ga0182185_1110653	Not Available	796	Open in IMG/M
3300015349\|Ga0182185_1184509	Not Available	629	Open in IMG/M
3300015349\|Ga0182185_1251199	Not Available	539	Open in IMG/M
3300015349\|Ga0182185_1288896	Not Available	501	Open in IMG/M
3300015350\|Ga0182163_1261839	Not Available	542	Open in IMG/M
3300015352\|Ga0182169_1200835	Not Available	651	Open in IMG/M
3300015352\|Ga0182169_1253374	Not Available	572	Open in IMG/M
3300015352\|Ga0182169_1290379	Not Available	528	Open in IMG/M
3300015352\|Ga0182169_1291880	Not Available	527	Open in IMG/M
3300015353\|Ga0182179_1081879	Not Available	941	Open in IMG/M
3300015353\|Ga0182179_1162537	Not Available	700	Open in IMG/M
3300015353\|Ga0182179_1180918	Not Available	666	Open in IMG/M
3300015353\|Ga0182179_1227074	Not Available	599	Open in IMG/M
3300015353\|Ga0182179_1228443	Not Available	597	Open in IMG/M
3300015353\|Ga0182179_1294943	Not Available	527	Open in IMG/M
3300015353\|Ga0182179_1316132	Not Available	509	Open in IMG/M
3300015353\|Ga0182179_1323622	Not Available	503	Open in IMG/M
3300015354\|Ga0182167_1154277	Not Available	847	Open in IMG/M
3300015354\|Ga0182167_1267289	Not Available	614	Open in IMG/M
3300015354\|Ga0182167_1279071	Not Available	597	Open in IMG/M
3300017412\|Ga0182199_1037217	Not Available	943	Open in IMG/M
3300017414\|Ga0182195_1034675	Not Available	1002	Open in IMG/M
3300017414\|Ga0182195_1166001	Not Available	567	Open in IMG/M
3300017414\|Ga0182195_1186563	Not Available	540	Open in IMG/M
3300017421\|Ga0182213_1228005	Not Available	533	Open in IMG/M
3300017432\|Ga0182196_1049313	Not Available	747	Open in IMG/M
3300017432\|Ga0182196_1079257	Not Available	637	Open in IMG/M
3300017435\|Ga0182194_1083178	Not Available	634	Open in IMG/M
3300017435\|Ga0182194_1085269	Not Available	628	Open in IMG/M
3300017440\|Ga0182214_1106766	Not Available	600	Open in IMG/M
3300017445\|Ga0182198_1105621	Not Available	648	Open in IMG/M
3300017447\|Ga0182215_1047384	Not Available	912	Open in IMG/M
3300017447\|Ga0182215_1133942	Not Available	566	Open in IMG/M
3300017447\|Ga0182215_1149976	Not Available	538	Open in IMG/M
3300017691\|Ga0182212_1040626	Not Available	1014	Open in IMG/M
3300017693\|Ga0182216_1058414	Not Available	847	Open in IMG/M
3300017693\|Ga0182216_1175311	Not Available	556	Open in IMG/M
3300017693\|Ga0182216_1191323	Not Available	536	Open in IMG/M
3300017693\|Ga0182216_1198356	Not Available	528	Open in IMG/M
3300020023\|Ga0182178_1012470	Not Available	619	Open in IMG/M
3300020033\|Ga0182146_104744	Not Available	562	Open in IMG/M
3300026035\|Ga0207703_12312445	Not Available	513	Open in IMG/M
3300026088\|Ga0207641_12438146	Not Available	522	Open in IMG/M
3300026095\|Ga0207676_12189364	Not Available	551	Open in IMG/M
3300028049\|Ga0268322_1008126	Not Available	916	Open in IMG/M
3300028049\|Ga0268322_1046880	Not Available	538	Open in IMG/M
3300028049\|Ga0268322_1049333	Not Available	528	Open in IMG/M
3300028054\|Ga0268306_1002439	Not Available	1123	Open in IMG/M
3300028054\|Ga0268306_1012673	Not Available	697	Open in IMG/M
3300028055\|Ga0268338_1021033	Not Available	640	Open in IMG/M
3300028056\|Ga0268330_1010160	Not Available	925	Open in IMG/M
3300028056\|Ga0268330_1018597	Not Available	765	Open in IMG/M
3300028056\|Ga0268330_1021104	Not Available	735	Open in IMG/M
3300028056\|Ga0268330_1023055	Not Available	715	Open in IMG/M
3300028056\|Ga0268330_1051440	Not Available	540	Open in IMG/M
3300028056\|Ga0268330_1062063	Not Available	504	Open in IMG/M
3300028057\|Ga0268352_1009099	Not Available	979	Open in IMG/M
3300028058\|Ga0268332_1015422	Not Available	875	Open in IMG/M
3300028058\|Ga0268332_1018468	Not Available	829	Open in IMG/M
3300028058\|Ga0268332_1022551	Not Available	779	Open in IMG/M
3300028058\|Ga0268332_1056877	Not Available	570	Open in IMG/M
3300028058\|Ga0268332_1079648	Not Available	501	Open in IMG/M
3300028061\|Ga0268314_1007156	Not Available	991	Open in IMG/M
3300028061\|Ga0268314_1042176	Not Available	551	Open in IMG/M
3300028062\|Ga0268342_1024990	Not Available	613	Open in IMG/M
3300028139\|Ga0268355_1018402	Not Available	508	Open in IMG/M
3300028142\|Ga0268347_1002542	Not Available	1079	Open in IMG/M
3300028142\|Ga0268347_1007178	Not Available	808	Open in IMG/M
3300028142\|Ga0268347_1009733	Not Available	741	Open in IMG/M
3300028143\|Ga0268348_1006960	Not Available	756	Open in IMG/M
3300028151\|Ga0268308_1002684	Not Available	1118	Open in IMG/M
3300028151\|Ga0268308_1003352	Not Available	1040	Open in IMG/M
3300028151\|Ga0268308_1005173	Not Available	912	Open in IMG/M
3300028151\|Ga0268308_1012150	Not Available	698	Open in IMG/M
3300028151\|Ga0268308_1014721	Not Available	657	Open in IMG/M
3300028151\|Ga0268308_1014998	Not Available	654	Open in IMG/M
3300028151\|Ga0268308_1028193	Not Available	534	Open in IMG/M
3300028151\|Ga0268308_1030591	Not Available	520	Open in IMG/M
3300028154\|Ga0268341_1001869	Not Available	1170	Open in IMG/M
3300028154\|Ga0268341_1004297	Not Available	916	Open in IMG/M
3300028251\|Ga0268324_1002953	Not Available	941	Open in IMG/M
3300028251\|Ga0268324_1006953	Not Available	748	Open in IMG/M
3300028262\|Ga0268310_1008110	Not Available	911	Open in IMG/M
3300028262\|Ga0268310_1026136	Not Available	635	Open in IMG/M
3300028467\|Ga0268333_1007953	Not Available	599	Open in IMG/M
3300028469\|Ga0268337_1010586	Not Available	606	Open in IMG/M
3300028470\|Ga0268307_1013970	Not Available	602	Open in IMG/M
3300028472\|Ga0268315_1011608	Not Available	658	Open in IMG/M
3300028525\|Ga0268305_112210	Not Available	506	Open in IMG/M
3300028529\|Ga0268311_1020143	Not Available	570	Open in IMG/M
3300028529\|Ga0268311_1022649	Not Available	549	Open in IMG/M
3300028529\|Ga0268311_1027459	Not Available	516	Open in IMG/M
3300032465\|Ga0214493_1054264	Not Available	947	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	98.80%
Environmental	Environmental	1.20%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	98.80%
Terrestrial	Environmental → Terrestrial	1.20%

Habitat	Taxonomy	Distribution
Phyllosphere	Host-Associated → Plants → Phyllosphere	90.36%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.02%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.41%
Soil	Environmental → Terrestrial → Soil	1.20%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified	90.36%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.02%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	1.20%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.20%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.20%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified	90.36%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.02%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	1.20%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.20%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.20%

Habitat	Taxonomy	Distribution
Switchgrass Phyllosphere	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Switchgrass Phyllosphere	61.45%
Phyllosphere	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Phyllosphere	28.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	6.02%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.20%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.20%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.60%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.60%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015273	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015278	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015280	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015284	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015293	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015297	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015306	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015309	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015312	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015313	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015316	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015317	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015318	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015319	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015320	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015325	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015326	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015327	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015328	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015329	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015330	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015331	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015332	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015334	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015336	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015337	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015338	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015340	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015348	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015349	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015350	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015352	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015353	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015354	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300017412	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017414	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017421	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017432	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017435	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017440	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017445	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017447	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017691	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017693	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300020023	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_22AUG2016_LD2 MG	Host-Associated	Open in IMG/M
3300020033	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_12JUL2016_LD2 MG	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028049	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_26JUN2017_LD1	Host-Associated	Open in IMG/M
3300028054	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_15MAY2017_LD1	Host-Associated	Open in IMG/M
3300028055	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_07AUG2017_LD1	Host-Associated	Open in IMG/M
3300028056	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_17JUL2017_LD1	Host-Associated	Open in IMG/M
3300028057	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_NF_18SEP2017_LD1	Host-Associated	Open in IMG/M
3300028058	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_07AUG2017_LD1	Host-Associated	Open in IMG/M
3300028061	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_05JUN2017_LD1	Host-Associated	Open in IMG/M
3300028062	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_MAIN_28AUG2017_LD1	Host-Associated	Open in IMG/M
3300028139	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_18SEP2017_LD1	Host-Associated	Open in IMG/M
3300028142	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_28AUG2017_LD1	Host-Associated	Open in IMG/M
3300028143	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_18SEP2017_LD1	Host-Associated	Open in IMG/M
3300028151	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_05JUN2017_LD1	Host-Associated	Open in IMG/M
3300028154	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_MAIN_28AUG2017_LD1	Host-Associated	Open in IMG/M
3300028251	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_17JUL2017_LD1	Host-Associated	Open in IMG/M
3300028262	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_MAIN_05JUN2017_LD1	Host-Associated	Open in IMG/M
3300028467	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_MAIN_07AUG2017_LD1	Host-Associated	Open in IMG/M
3300028469	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_NF_07AUG2017_LD1	Host-Associated	Open in IMG/M
3300028470	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_15MAY2017_LD1	Host-Associated	Open in IMG/M
3300028472	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_05JUN2017_LD1	Host-Associated	Open in IMG/M
3300028525	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_NF_15MAY2017_LD1	Host-Associated	Open in IMG/M
3300028529	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_MAIN_05JUN2017_LD1	Host-Associated	Open in IMG/M
3300032465	Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_MAIN_12JUL2016_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0070671_1003870481	3300005355	Switchgrass Rhizosphere	MFNGSFIRVCRKLRIVKKLDFAFLSLGGPSHGARVWSLGRVPKHRNHWKEVEGLLFSPKNS*
Ga0070671_1015103911	3300005355	Switchgrass Rhizosphere	MFNGSFLRVCRILRSVKKIDFAFLSLGGPSHGARVWCLGRVPKHRNQWQEVEGLLFSP
Ga0068863_1018038611	3300005841	Switchgrass Rhizosphere	MFNGSYLRACRILWFVKKLDFPFLSLGGPSHGARVCCLGRVPMHRNQWQEVEGLLFSPQNFQLVHILSFRS*
Ga0068858_1023961711	3300005842	Switchgrass Rhizosphere	MFNGSYLRACMKLRIVQKIRFPFMSLGRPSHGARVWCLGRVPKRSNQWQEVEALLFRTKNSHLVHILSFRS*
Ga0068860_1017124701	3300005843	Switchgrass Rhizosphere	MFNGSFCRVCRILRFVKKIDFAFLSVSGPSHGARVWCLGRVPKHRNQWLEIEGLLFIPKNSQLVHILSF
Ga0068860_1017177552	3300005843	Switchgrass Rhizosphere	MFNGSFLRVCRILRFVKKFDFAFLSLGGASHGARVWCLGRVPKPRNKWQEVEGLLFSPQNSQLVHIL
Ga0068860_1017984281	3300005843	Switchgrass Rhizosphere	MFNDSYLRACMKLWIVQKIIFSHLEFGRTKAGARVWCLGQVPKHRNQWQEVEGLLFSPQNSQLLHIL
Ga0068862_1024229891	3300005844	Switchgrass Rhizosphere	VCRILRFVKKLDFAFLSLGGPSHGARVWCLGRVPKHRNQWQEVEGLLFSPQNSQLVHILSFRSLGVVS*
Ga0068862_1024321232	3300005844	Switchgrass Rhizosphere	LDFAFLSLGGPSHGARVWCLGRVPKNRNHWQEVEGSGDVEGVLFNTKNSQLVHILSFHS*
Ga0105247_114009271	3300009101	Switchgrass Rhizosphere	MFNGLFLRVCRILRVVKKLDFAFLSLGRPSHGARVWCLGRVPKHRNHWQELEGLLFSPKNSQLVHILNFSS*
Ga0134122_129812351	3300010400	Terrestrial Soil	MFNGLFLRVCRILWVVKKLDFAFLSLGGPSHGARVWCLGRVPKHMNHWQEVEGLLFRHKNSQLVHILSFHS*
Ga0134123_119419171	3300010403	Terrestrial Soil	MFNGSFLRVCRKLRIVKKLDFAFLSLGGPSHGARDWSLGRVPQHRNHWKEVEGLLFSPKNSHLVHILSFHS*
Ga0157379_119190141	3300014968	Switchgrass Rhizosphere	MFNGSFLRVCSILRFVKKLNFPFMSLGGPRHGARVWCLGRVPKHRNTWQELEGLLFSPQNSQLVHILRFHS*
Ga0182102_10107241	3300015273	Switchgrass Phyllosphere	MFNGLFLRVCRILRFVKKLDFAFLSLGGPSHGAWVWCLGRVPKHRNKWQEVEGLLFSPQNYLVSRPSAKS*
Ga0182102_10375521	3300015273	Switchgrass Phyllosphere	MINGSFLRVCRKLRFVKKLDFAFLSLGGPSHGARVWYLGRVPKHRNQGQEVEGLLFSLQNSQLVHILSF*
Ga0182099_10094141	3300015278	Switchgrass Phyllosphere	MLNGSFLRVCRILWFVKKLDFAFLSLGGSSHGAQVLSLGRVPKHRNQWQEVEGLLFSPKNSQLVHILSFHS*
Ga0182099_10351161	3300015278	Switchgrass Phyllosphere	MFNGLFLRVCRILRVVKKLDFAFLSLGGPSHGARVWCLGRVPKHRNQWQEVEGLLFSPQNSQLVH
Ga0182100_10394761	3300015280	Switchgrass Phyllosphere	MFNGSFLRVCRILQFVKKLDFAFLSRGGPSHGARVWCLGRVPKHRDQWQEVEGLLFSPQNSQLVHILSFHS*
Ga0182100_10497501	3300015280	Switchgrass Phyllosphere	MFNGSFLRVRRILRFVKKLDVAFLSLGGSSHGAQILCLGRVPKHRNQWQEVEGLLFS
Ga0182100_10547241	3300015280	Switchgrass Phyllosphere	MFNDSYLRACMKLWIVQRIRFPFLSLGGPRHGALVWCLGRVPKHRNQWQELEGLLFSPKN
Ga0182100_10658621	3300015280	Switchgrass Phyllosphere	WRIIVFNGSLLRVCRILRFVKKLDFAFLSLGGLSHGDRVWCLGRVLKHRNQWQEVEGMLFSPQNSQLVHILSFHS*
Ga0182101_10496301	3300015284	Switchgrass Phyllosphere	MFNGSFLIACRILRFVKKLDFAFLSLGGPSHGARLWCLGRVPKHRNHWQEEEGLLFSPKNSQLVHILSFH
Ga0182103_10107031	3300015293	Switchgrass Phyllosphere	MFNSSFLRVCRILWFVKKLDFAFLSLGGPSHGARVWCLGRGPKHRNQWKEVEGLLFNPKN
Ga0182104_10617081	3300015297	Switchgrass Phyllosphere	MFNGSFLRVCSILRFVKKLDFAFLSLGGPSHSAWVWCLGRVPKHRNQWQEVEGLLFSPQNSQLVHIFSFRS*
Ga0182104_10877081	3300015297	Switchgrass Phyllosphere	GSLLRVCRILRFVKKLDFAFLSLGGLSHGDRVWCLGRVLKHRNQWQEVEGMLFSPQNSQLVHILSFHS*
Ga0182104_11140691	3300015297	Switchgrass Phyllosphere	TIFIQGPSIVLLVWRSIMFNGSFLRVCRIVRFVKKLDFAFLSLGGPSHGARVWCLGRVPKRSNQWQEVEALLFRTKNSHLVHILSFRS*
Ga0182104_11197861	3300015297	Switchgrass Phyllosphere	MFNGSYLRACMKLRIVKKLDFAFLSLGGPSHGARVWCQGRVTKHRNQWQAVEGLLFSPQNSQLVHILSFRS*
Ga0182104_11205401	3300015297	Switchgrass Phyllosphere	MINGSFLRVCRILRFVKKLDFAFFSLGGPSPGARVWCLGRVPMHRNQWQEVEGLLFSPQ
Ga0182180_10679691	3300015306	Switchgrass Phyllosphere	MFNGSFLRVCRILRFVNKLDFAFLSLGGPRHGARVWCLNRVPKHRNQWQEVEGLLFSPQNYLLVHILSFPNNAVVSLFLFPTG*
Ga0182180_10720171	3300015306	Switchgrass Phyllosphere	MFNGSFLRVCRILRFVKKLDFAFLSLGKPRHGARVLCLGRVPKHRKQWQEVGGLLFSPQNSKLVHILSFRY*
Ga0182098_11173801	3300015309	Switchgrass Phyllosphere	MFNGSFIRVCRILRFVKKLDFAFLSLGGPRHGDRVWCLGRVPKHRNQWQEVEGLLFSLKTLSW
Ga0182168_10353242	3300015312	Switchgrass Phyllosphere	MFNGSFLRVCRILRFVKNLDFAFLSLGRPRHGAQVWCLGRVPKHRNQWQEAEGLLFSPKNSQLLHILSFRF*
Ga0182168_11211171	3300015312	Switchgrass Phyllosphere	QFVKKLDFAFLSLGGPSHGARVWCLGRVPKLRNQWQEVEGLLFSPQKSQLVHILSFHS*
Ga0182164_10653731	3300015313	Switchgrass Phyllosphere	MFNGSYLRLCMKLRIVKKLDFAFLSLGGPSHGARVWCQGRVPKHRNQGQEVEGLLFSLQNSQLAHILSFYS*
Ga0182164_11049651	3300015313	Switchgrass Phyllosphere	MFNGSLLRVCRILRFVKKLDFAFLSLGGLSHGARVWCLGRVPKHRNQWQEVEGLLFSPQNSQLVHILSF
Ga0182121_11049111	3300015316	Switchgrass Phyllosphere	MFNDSFLRVCRILRFVKKLDFAFLSLGGPSHGARVWCLGRVPKHRNQWQEVEGLLFSPQNSQLVHIL
Ga0182121_11209841	3300015316	Switchgrass Phyllosphere	IMFNGSFLRVCRILRFVKKLDFAFLSLGGPSHGARVWYRGRVQKHRNQWQEVEGLLFSPKNS*
Ga0182136_10660131	3300015317	Switchgrass Phyllosphere	MFNGSYLRACMKLRIVQKIRFPFMSLGRPSHGARVWCLGRVPKHSNQWQEVEALLFRTKNSHLVHILSFRS*
Ga0182136_11155621	3300015317	Switchgrass Phyllosphere	MFNGSLLRVCRILRFVKKKLDFPFLSLGGPSHGARVWCLGRVPKHRNQWQEVQGLLFIPQNSQLVHILI
Ga0182181_11022761	3300015318	Switchgrass Phyllosphere	MFNGSFLRVCRILRLVKKLDFAFLSLGEPSHGARVWCLGRVPKPRNHRQEVEGLLFIPQNSQLVHILSFPS*
Ga0182130_11303831	3300015319	Switchgrass Phyllosphere	MFNGSFLRERRILRFVKKLDFAFLSLGGPRHGARVWCLGRVPKHRNQWQEVVGLLFSPKNSQLLHILSFRS*
Ga0182165_10621611	3300015320	Switchgrass Phyllosphere	MFNGSFLRVCRILRFAKKLDFAFLSLGGPSHGARVWYLGRVPKHRNQWQEVEGLLFNPKNSQLVHILSFHS*
Ga0182165_11010591	3300015320	Switchgrass Phyllosphere	MFNGSYLRACMKLRIVKKLDFAFFSLGGPSHGARVWCLGRVPKHRNQWQEVEGSLFCPKNSQLVH
Ga0182148_11109751	3300015325	Switchgrass Phyllosphere	MFNGSFLRVCRILRLVKKLDFAFLSLGGPSHGARVWCLGRVPMHRNQWQEVDGLLFSAQNSHLVHILSFHS*
Ga0182166_10751651	3300015326	Switchgrass Phyllosphere	MFNGSFLRVCRKLWIVKKFDFAFLSLGGPSHGARVWSLGRVPKHRNHWKEVEGLLFSPKNSQLVHILSFHS*
Ga0182166_11440601	3300015326	Switchgrass Phyllosphere	VFNGSLLRVCRILRFVKKLDFAFLSLGGQSHGARVWCLGRVPKHRNQWQEVEGLLFNPKNSQ
Ga0182114_10437481	3300015327	Switchgrass Phyllosphere	MFNGSFLSVCKILRFVKKFDFAFLSLGGSSHGARVWCLGRVPKPRNQWQEVEGLLFIPQNSQLVHILSFLS*
Ga0182114_11010571	3300015327	Switchgrass Phyllosphere	MFNGSFCRVCRILRFVKKIDFAFLSVSGPSHGARVWCLGRVPKHRNQWQEVEGLLFSPKN
Ga0182114_11147791	3300015327	Switchgrass Phyllosphere	MFNGSFLRVCSILRFLKKLDFAFLSLGGPSHGARVWCLGRVPKHRNHWQEVEGMLFNPKNSQLVHILSFRS*
Ga0182153_10726991	3300015328	Switchgrass Phyllosphere	MFNGSFLRVCRILRFVKKLDFAFLSLGGSRHGAWVWCLGLVPKHRNQWQEVGGLLFSPQN
Ga0182153_11046531	3300015328	Switchgrass Phyllosphere	MFNGSFLRVCRILRLVKKLDFAFLSLGGPSHGARVWCLGRVPMHRNQWQEVDGLLFSPQNSQLVHILSFHSKA
Ga0182135_10950561	3300015329	Switchgrass Phyllosphere	MFNGSYLRACMKLRIVQKNRFPFMSLGRPSHGARVWCLGRVPKRSNQWQEVEALLFRTKNYHLVHILSFRS*
Ga0182135_11326171	3300015329	Switchgrass Phyllosphere	MFNGSFLRVCRILRVVKKLDFAFLSLGGPSHGARVWCLGRGPKHRNQWKEVEGLLFNPKNSHLVHILRFHS*
Ga0182135_11412651	3300015329	Switchgrass Phyllosphere	MFNGSFLRVCRILQIVKKLDFAFLSLGGPSHGARVWCLGRVPKHRNQWQEVEGLLFSPQNSQFVHILSFRS*
Ga0182152_11005041	3300015330	Switchgrass Phyllosphere	MFNGSILRMCRILRFVKKLDFAFLSLDGLSHGARVWCLGRVPKHRNQWQEVEGLLFSPQNSQLVHILSF
Ga0182152_11254031	3300015330	Switchgrass Phyllosphere	FVKKLDFAFLSLGGLSHGALVWCLGRVPKHTNPWQEVEGLLFSPQNSQLVQILSFHS*
Ga0182152_11353221	3300015330	Switchgrass Phyllosphere	MFNGSLLRVCRILRFVKKLDFAFLSLGGLSHGARVWCLGRVPKHRNQWQEVEGLLFSPQNSQLVHI
Ga0182131_10995251	3300015331	Switchgrass Phyllosphere	MFNGSFLRVCRILQFVKKLDFAFLCLGRPSHGARVWCLGRVPKHRNQWQEVEGLLFSPKNSQLVHIL
Ga0182117_10469631	3300015332	Switchgrass Phyllosphere	MFNGSFLRVCRILWFVKKLDFAFLSPGGPSHGARVWCLGRVPKDRNQWQELEGLLFSPQNSQLVHILSFHF*
Ga0182132_11159221	3300015334	Switchgrass Phyllosphere	LQVWRSIMFNGSFLRVCRILWFVKKLDIAFLSLGGSSHGAQVLCLGRVPKHRNQWQEVEGLLFSPKNSQMVHILSFHS*
Ga0182132_11316861	3300015334	Switchgrass Phyllosphere	MFNGSFLRECRILRIVKKLDFAFLSLSGPSHGARVWCLGRVPKHRNQWQEVEGLLFNPKN
Ga0182132_11436531	3300015334	Switchgrass Phyllosphere	MFNGSFLRLCRILRFVKKLDFAFLSLGGLSHGARVWCLGRDPKHRNQWQEIEGLLFSPK
Ga0182150_10578241	3300015336	Switchgrass Phyllosphere	MFNGSLLRVCRILRFVKKLDFAFLSLGGPSHGARVWCLGRGPKHRNQWKEVEGLLVNPKNSHLVHILRFHS*
Ga0182150_10797211	3300015336	Switchgrass Phyllosphere	MKLRIMQKIRFSLHESGWTRHGARVWCLGRVPKHRNQWQEVEGLLFSPHNAQLVHILSF
Ga0182150_10899481	3300015336	Switchgrass Phyllosphere	MFNGSFLRVCRILQFLKKLDFAFLSLGGPSHGARVWCLSRVPKHRNQWQEVEGLLFNPKNSQLVHILSFHS*
Ga0182151_11254211	3300015337	Switchgrass Phyllosphere	MFNGSFLRVCRKLRFVKKLDFAFLSLGGPSHGARVWYLGRVPKHRNQGQEVEGLLFSLQNSQLVHILSFCS*
Ga0182151_11395541	3300015337	Switchgrass Phyllosphere	MKLRIVKKLDFAFLSLGGPSHGARVWCQGRVPKHRNQWQEVEGLLFSPQNSQLVHILSFH
Ga0182137_11438021	3300015338	Switchgrass Phyllosphere	IILQVWRRIMFIGSFLRVCRILRFVKKLDFAFLSLGGPSHGARVWFLGRVPKHRNQWQEVEGLLFSPQNSQLVYILSFSS*
Ga0182133_11432521	3300015340	Switchgrass Phyllosphere	MFNGSFLRVCRILRSVTKIDFAFLSLGGPSHGARVWCLGRVPKHRNQWQEVEGLLFS
Ga0182115_11446021	3300015348	Switchgrass Phyllosphere	MFNDSFLRVCRILQFVKKLDSAFSSLGGPSHGARVWCLGRVPKHRNQWQEVEGLLFSPKNPQLVHILSFHS*
Ga0182115_11702081	3300015348	Switchgrass Phyllosphere	MFNGLFLRVCRILWVVKKLDFAFLSLGGPSHGARVWCLGRVPKHRNQWQEVEGLLFSPKISQLVHILSF
Ga0182115_11988061	3300015348	Switchgrass Phyllosphere	MFNGSFLRVCRIIRFVKKLDFAFLSLGGPSHGAWVWCLGRVPKHRNQWQEIEGLLFSPKNSQLVHILSTNPGHHGLVRPDS*
Ga0182185_11106531	3300015349	Switchgrass Phyllosphere	MFNGSLLRVCRILQFLKKLDFAFLSLGGLSHGARVWCLGRVLKHRNQWQEVEGLLFSPQNSQLVHILSFHS*
Ga0182185_11845091	3300015349	Switchgrass Phyllosphere	MFNGSYLRACMKLQIVKKLDFAFLSLGGPRHGARVWCLGRVPKHRNLWQEVEGMLFSRKNSQLVHIWSFHS*
Ga0182185_12511991	3300015349	Switchgrass Phyllosphere	MFNGSLLRVCMILWFVKKLDFAFLCLGGPSHGARVWCLGRVQKHRNQWQEVEGLLFSHKNS*
Ga0182185_12888961	3300015349	Switchgrass Phyllosphere	MFNGSLLRVCRILRFVKKLDFAFLSLGGPSHGARVWCLGRVPKHRNLWQEVEGLLFSPQNSQLVHILSIHS*
Ga0182163_12618391	3300015350	Switchgrass Phyllosphere	MFNGSFLRVCRILRLVKKLDFAFLSLGGPSHGARVWCLGRVPMHRNQWQEVDGLLFSPQNSQLVHILSFHS*
Ga0182169_12008351	3300015352	Switchgrass Phyllosphere	MFNGSFLRVCRILRFVKQLDFAFLSLGGPSPGARVWCLGRVPKHRNQWQEVEGLLFSPQNSQLVH
Ga0182169_12216801	3300015352	Switchgrass Phyllosphere	MLRFVKKLDSAFLSLGGPSPGAWVWCLGRVPKHRNQWQEVEGLLFSPKISQLVHIL
Ga0182169_12533741	3300015352	Switchgrass Phyllosphere	MFNGSYLRACMKLRIVKKLDFAFLSLGGPRHGARVWCLGRVPKHRNQWQEVEGLLFSPQNSQLVHILSFSS*
Ga0182169_12903791	3300015352	Switchgrass Phyllosphere	MFNGSFLRVCRILRFVKKLDFAFLSLGGPRLGAWVWCLGRVPKHRNQWQEVEGLLFSPQNSQLVHILS
Ga0182169_12918801	3300015352	Switchgrass Phyllosphere	MFNGSFLRVCRILRFVKKLDFAFLSLGGPSYGARVWCLVRVPKHRNQWQELVGLLFSPQNIHLFQ
Ga0182179_10818792	3300015353	Switchgrass Phyllosphere	MFNGSFLRVCRILRFVKKLDFAFLSLGGPGHGARVWCLNRVPKHRNQWQEVEGMLFSPQNSQLVHILSFLS*
Ga0182179_11625371	3300015353	Switchgrass Phyllosphere	MFNGSLLRVCRILRFVKKLDFAFLSLGGLSHGALVWCLGRGPKHRNQWQEVEGLLFSPLFNPKNSQLVHILSFRS*
Ga0182179_11809181	3300015353	Switchgrass Phyllosphere	MLNDSFLRVCRILRFVKKLDFPFWSLGGPRHGARVWCLGRVPKHRNLWQEVEGLLFSPKKLSVGAYFE
Ga0182179_12270741	3300015353	Switchgrass Phyllosphere	IQGPSIVLPVWRCIMFNGSYLRACMKLRIVKKLDFAFLSLGGPRHGARVWCLGRVPKHRNQWQEVERLLFSPQNSQLVHILSFSS*
Ga0182179_12284431	3300015353	Switchgrass Phyllosphere	MFNGSYLRACMKLRIVKKLDFAFLSLGGPSHGARVWCQGRVPKHRNQWQEVEGLLFSPQNSQLVHILSFHF*
Ga0182179_12949431	3300015353	Switchgrass Phyllosphere	MFNGSFLRVCRILRFVKKLHFAFLSLGGPSHGARVWCLGRVPMHRNHWQEVEGSGKKVGGLLFSPKNSQLVHILSFCS*
Ga0182179_13161321	3300015353	Switchgrass Phyllosphere	MFNDSFLRVCRILQFVKKLDSAFSSLGGPSPGARVWCLGRVPKHRNQWQKVEGLLFSPQNSQLVHILSF
Ga0182179_13236221	3300015353	Switchgrass Phyllosphere	MFNGSFLRVCRILWFVKKLDFTFLSLCGPSRGARVWYLGRVPKHRNQWQEVEGLLFSLQNSQLVHILSFYS*
Ga0182167_11542771	3300015354	Switchgrass Phyllosphere	MFNGSFLRVCRILRFVKKLDFAFMSLGGPSHGARVSCLGRVPKHRNQWQEVEGLLFSPQNSQLVHILSFRWCIF*
Ga0182167_12672891	3300015354	Switchgrass Phyllosphere	GSFLRVCSILRFVKKLDFAFLSLGGPSHGARVWCFGRVPKYRNQWQEVEGLLFGPQNSQLVHILSFRS*
Ga0182167_12790711	3300015354	Switchgrass Phyllosphere	MLNGSFLRVCRILRFVKKLDFAFLSLGGSSHGAQVLSLGRVPKHRNQWQEVEGLLFSPKNSQLVHILSFHS*
Ga0182199_10372171	3300017412	Switchgrass Phyllosphere	VFNGLFLRVCRILLIVEKLDFPSLSLGGPRNGARVWCLGRVPKHRNQWQEVEGLLFSPQNSQLV
Ga0182195_10346751	3300017414	Switchgrass Phyllosphere	MFNASFLRVCRKLQFVKKLDFAFLSLGGPSHGARVWYLGRVPKHRNQGQEVEGLLFSPQNSQLVHILSFCS
Ga0182195_11660012	3300017414	Switchgrass Phyllosphere	MFNDSYLRVCRILWFVKKLDFTFLSLGGPSHGARVWCLGRVPMHRNQWQEVEGLLFSPQNSQLVHILSFRSLGVVS
Ga0182195_11865631	3300017414	Switchgrass Phyllosphere	MFNGSFLRVCMILRFVKKLDFAFLSLCGPSHGARVWYLGRVPKHRNQWQEVEGLLFSP
Ga0182213_12280052	3300017421	Switchgrass Phyllosphere	MINGSFLRVCRKLRFVKKLDFAFLILGGPSHGARVWCLGRVPKHRNHWQEVESLLFSPQNSQLVHILSIHSKAVVSLFIFPT
Ga0182196_10493131	3300017432	Switchgrass Phyllosphere	MFNGSFLRVCRILRVVKKLDFAFLSLGGPSHGARVWCLGRGPKHRNQWKEVEGLLFNPKNSHLVHILRFHS
Ga0182196_10792571	3300017432	Switchgrass Phyllosphere	MFNGSYLRACMKLRIVQKIRFPFMSLGRPSHGARVWCLGRVPKHSNQWQEVEALLFSPKNSHLVHILSFRS
Ga0182194_10831781	3300017435	Switchgrass Phyllosphere	MFHGSFLRVCRRLRVVKKLDFAFLSLGGPSYGARVWCLGRVPKHRNQWQDVEGLLFSTKNSQLVHILSFRS
Ga0182194_10852691	3300017435	Switchgrass Phyllosphere	MFNASFLRVCRKLRFVKKLDFAFLSMGGPSHGARVWYLGRVPKHRNQGQEVEGLLFSPQNSQLVHILSFCS
Ga0182214_11067661	3300017440	Switchgrass Phyllosphere	MDCVKKLDYPFMSLGGPSHGAQVWCLGRVPKHRNQWQEVEGLLFSPQNSQLVHILSSHSYGVVSLFIFPTG
Ga0182198_11056211	3300017445	Switchgrass Phyllosphere	MFNGSFLRVCRILWFAKKLDFAFLSLGGPSHGARVWCLDRVSKHRNHWQEVEGLLFNPKNSQLVH
Ga0182215_10473842	3300017447	Switchgrass Phyllosphere	MFNGSFLRVCRMLRFVKKLDSAFLSLGGPSPGAWVWCLGRVPKHRNHWQEVEGLLFSPKNSQLVHIL
Ga0182215_11339421	3300017447	Switchgrass Phyllosphere	MFNDSFLRVCRILRFVKKLDFAFLSLGGPSNGARVWCLGRVPKHRNQWQEVEGLLFSPQNSQLVHILSFHS
Ga0182215_11499761	3300017447	Switchgrass Phyllosphere	MFNGSFLRVCIILRFVKKLDFAFLSLGGPSHGARVWCLGQVPKHRNHWEEVEGLLFNPKNSKLVHILCFHS
Ga0182212_10406261	3300017691	Switchgrass Phyllosphere	MFNGSFLRVCRKLWIVKKFDFAFLSLGGPSHGARVWSLGRVPKHRNHWKEVEGLLFSPKNSQLVHILSFHS
Ga0182216_10584141	3300017693	Switchgrass Phyllosphere	MFNGSLLRVCRILRFVKKLDFAFLSLGGLSHGARVWCLGRVPKHRNQWQEVEGLLFSPPK
Ga0182216_11753111	3300017693	Switchgrass Phyllosphere	MFNGSFLRVCRILWFVKKLDFAFLSLGGLSHGAQVWCLGRVPKHRNQWQEVEGLLFS
Ga0182216_11913231	3300017693	Switchgrass Phyllosphere	LLLVWRSIMFNGSFLRVCSILRFVKKLDFAFLSLGGPSHGARVWCFGRVPKYRNQWQEVEGLLFGPQNSQLVHILSFRS
Ga0182216_11983561	3300017693	Switchgrass Phyllosphere	MFNGSFLRVCRILRFVKKLDVAFLSLGGSNHGAQILCLGRVPKHRNQWQEVEGLLFSPKNSQLVHILSFH
Ga0182178_10124701	3300020023	Switchgrass Phyllosphere	MFNGFFLRVCRILRFVKKKLDFAFLSLGEPSHGARVWCLGRVPKHRKHWQEVEGLLFNPKNSQLVHILSFCS
Ga0182146_1047441	3300020033	Switchgrass Phyllosphere	MFNDSYLRVCRILWFVKKLDFSFLSLGGPSHGARVWCLGRVPKHRNKWQEVEGLLFSPQNSQLVHILSFRS
Ga0207703_123124451	3300026035	Switchgrass Rhizosphere	MFNGSFLRVCRILRFVKKLDFAFLSLGGPSHGARVWCLGRVPKHRNQWQEVEGLLFSPKNSQLVHILSFHS
Ga0207641_124381461	3300026088	Switchgrass Rhizosphere	MFNGSLLRVCRILRFVKKLDFAFLSLGGLSHGARVWCLGRVPKHRNQWQEVEGLLFSHQNSQLVHILSFHS
Ga0207676_121893641	3300026095	Switchgrass Rhizosphere	VFIQGPSIVVPVWRCIMFNGSYLRACMKLRIVQKIRFPFMSLGRPSHGARVWCLGRVPKRSNQWQEVEALLFRTKNSHLVHILSFRS
Ga0268322_10081262	3300028049	Phyllosphere	MFNGSLLRVCRILRFVKKLDFAFLSLGGLSHGALVWCLGRGPKHRNQWQEVEGLLFSPLFNPKNSQLVHILSFRSLGVVS
Ga0268322_10468801	3300028049	Phyllosphere	MFNGSFLRVCRKLRFVKKLDFAFLSLGGPSHGARVWYLGRVPKHRNQGQEVEGLLFSPQNSQLVHILSFCS
Ga0268322_10493331	3300028049	Phyllosphere	MFNDSFLRLCRILRFVKKLDFPFLSLGGPRHGARVWCLGRVPKHRNLWQEVEGLLFSPKKLSVG
Ga0268306_10024391	3300028054	Phyllosphere	MFNGSFLRVCRILRFVKKLDFAFLSLGGPSHGARVWCLGRVPKHRNQWQEVEGFLFSPQNSQLVHILSFDS
Ga0268306_10126731	3300028054	Phyllosphere	MFNGSFLRVCRILRFVKKLDFAFLSLGGPSYGARVWCLVRVPKHRNQWQELVGLLFSPQNIHLFQQVI
Ga0268338_10210331	3300028055	Phyllosphere	MFNGSFLRVCRILWFVKKLDFAFLSLGVPRHGARVWCLGRVPRHRNQWQEVEGLLFSPQNSQLV
Ga0268330_10101601	3300028056	Phyllosphere	MFNGSFLRVRRILRILKKLDFPFLSLGGPSHCARVWCLGRVPKHRNQWQEVEGLLFGPKNSQLVRILSFHS
Ga0268330_10185971	3300028056	Phyllosphere	MFNGSFLRVCRILWFVKKFDFAFLSLGGPSHGARVWCLGRVPKPRNQWQEVEGLLFIPQNSQLVHILSFPS
Ga0268330_10211041	3300028056	Phyllosphere	MFNGSFLRVCRILRFVKKLDFAFLSQGGPRHGARVWCLGRVPKHRNQWQEVGGLLFSPQN
Ga0268330_10230551	3300028056	Phyllosphere	MFNGSFLRVCRILRLVKKLDFAFLSLGGPSHGARVWCLGRVPMHRNQWQEVDGLLFSPQNSQLVHILSFRSKAVVS
Ga0268330_10514401	3300028056	Phyllosphere	VWRIIMFNGSLLRVCRILRFVKKLDFAFLSLGGLSHGALVWCLGRGPKHRNQWQEVEGLLFSPLFNPKNSQLVHILSFRS
Ga0268330_10620631	3300028056	Phyllosphere	MFNGSFLRVCSILRFVKKLDFAFLSLGGPSHSAWVWCLGRVPKHRNQWQEVEGLLFSPQNSQLVHIFSFRS
Ga0268352_10090991	3300028057	Phyllosphere	MFNGSFLRVCRILRFVKNLDFAFLSLGGPRHGARVWCLGRVPKHRNQWQEVGGLLFSPQNSQLMHILSFH
Ga0268332_10154221	3300028058	Phyllosphere	MFNGSFLRVCRILRIVKKLDFAFLSLGGPRHGARVWCLNRVPKHRNQRQEVEGLLFSP
Ga0268332_10184681	3300028058	Phyllosphere	MFNGSYLRACMKLRIVKKLGFAFLSLGGPSHGARAWCQGRVPKHRKQWQEVEGLLFSPQNSQLVHILSFRS
Ga0268332_10225511	3300028058	Phyllosphere	MFNSSFLRVCRILRIVKKLDFAFLSLGGPSHGARVWCLDRGPKHRILWKKVEGLLFNPKNSHLVHILR
Ga0268332_10568771	3300028058	Phyllosphere	MFNGSFLRVCRILRFVKKLDFAFLSLGKPRHGARVLCLGRVPKHRKQWQEVGGLLFSP
Ga0268332_10796481	3300028058	Phyllosphere	MFNGSYLRACMKLRIVKKLDFAFLSVGGPRHGARVWCLGRVPKHRNQWQEVEGLLFRPQNSQLVH
Ga0268314_10071561	3300028061	Phyllosphere	MFNGSFLRVCRILRFVKKLDFAFLSLGGPRHGARVWCLGRVPKHRNQWQEVEGLLFSPQNSQL
Ga0268314_10421761	3300028061	Phyllosphere	MFNGSYLRACMKLRIVKKLDFAFLSLGGPRHGARVWCLGRVPKHRNQWQEVEGLLFSPQNSQLVH
Ga0268342_10249901	3300028062	Phyllosphere	GSYLRARMKLRIVKKLDFAFLSLGGPSHGARVWCQGRVTKHRNQWQAVEGLLFSPQNSQLVHILSFRS
Ga0268355_10184021	3300028139	Phyllosphere	TVFIQGPSIVLPVWRCIMFNGSYLRACMKLRIVQKIRFPFMSLGRPSHGARVWCLGRVPKRSNQWQEVEALLFRTKNSHLVHILSFRS
Ga0268347_10025421	3300028142	Phyllosphere	MFNGSFLRVCRIIRFVKKLDFAFLSLGGPSHGAWVWCLGRVPKHRNQWQEIEGLLFSPKNSQLVHILSSKPGYHGLVRPDS
Ga0268347_10071781	3300028142	Phyllosphere	MFNGSFLRVCRILWFLKKLDFAFLSLGGPSHGARVCCLGRVPKHRNQWQEVEGLLFNPKNSQLVHILSF
Ga0268347_10097331	3300028142	Phyllosphere	RSIMFNGSFLRVCRILRFVKKLDFAFLSLGGPSHGARVWYRGRVQKHRNQWQEVEGLLFSPKNS
Ga0268348_10069601	3300028143	Phyllosphere	MFNGSFLRVCRILWFVKKLDFAFLNLGGPSHGARVWCLGRVPKHRNQWQEVEGLLFSPQNSQLVHILIFHS
Ga0268308_10026841	3300028151	Phyllosphere	MFNGSLLRVCRILRFVKKLDFAFLSLGGLSHGALVWCLGRGPKHRNQWQEVEGLLFSPLFNPKNSQLVHILSFRS
Ga0268308_10033521	3300028151	Phyllosphere	MFNGSFLSVCKILRFVKKFDFAFLSLGGSSHGARVWCLGRVPKPRNQWQEVEGLLFIPQNSQLVHILSFPS
Ga0268308_10051731	3300028151	Phyllosphere	MFNGSFLRVCRILRFVKKLDFAFLSLGGPRHGARVWCLGRVPKHRNQWQEVGGLLFSPQNSQL
Ga0268308_10121501	3300028151	Phyllosphere	MFNGSFLRVCRILWFVKKLDFAFLSLGGPSHCAWVWCLGRVTKHRNQWQEIEGLLCSPKNSQWVH
Ga0268308_10147211	3300028151	Phyllosphere	MFIGSFLRVCGILWFVKKLDFAFLSLGGPSHGALVWCLGRVPKHTNQWQEVEGLLFSPQNSQLVQILSFHS
Ga0268308_10149981	3300028151	Phyllosphere	MFNGSLLRVCRILRFLKKLDFAFLSLGGPSHGARVSCLGRVPKHRNQWQEVEGLLFSPQNSQLVHILSFHS
Ga0268308_10281932	3300028151	Phyllosphere	MFNDSYLRACMKLRIVQKKDFPFLSLGRPRHGARVWCLGRVPKHRNQGQEVEGLLFSPQNSQLVHILSFRSYGVVS
Ga0268308_10305911	3300028151	Phyllosphere	MFNGSLLRVCRILRFVKKLDFAFLSLGGLSHGARVWCLGRVPKHRNQWQEVEGLLFSHQ
Ga0268341_10018691	3300028154	Phyllosphere	MFNGSFLRVCRILQFVKKLDFAFLSLGGPRHGARVWCLGRVPKHRNQWQEVEGLLFSPQNSQFVHI
Ga0268341_10042971	3300028154	Phyllosphere	MFNGSYLRACMKLRIVKKLDFAFLSLGGPRHGARVWCLGRVPKHRNQWQEVEVLLFSPQ
Ga0268324_10029531	3300028251	Phyllosphere	MFNGSYLRACMKLRIVKKLDFAFLSLGGPSHGARVWCQGRVPKHRNQWQEVEGLLFSPQNSQLLHILSFCS
Ga0268324_10069531	3300028251	Phyllosphere	MFNGSFLRVCRILWFVKKFDFAFLSLGGPSHGARVWCLGRVPKPRNQWQEVEGLLFVPQNSRLVHI
Ga0268310_10081102	3300028262	Phyllosphere	MFSGSFLRVCRILRFVKKIDFAFLSLGGPSHGARIWCLSRVPKHRNQWQEVEGLLFIPQN
Ga0268310_10261361	3300028262	Phyllosphere	MFNGSFLRVCRILRLVKKLDFAFLSLGGPSHGARVWCLGRVPMHRNQWQEVDGLLFSPQNSQLVHILSFHSKAVVSLFIFPTGTISLDSEP
Ga0268333_10079531	3300028467	Phyllosphere	MFNGSFLRVCRKLRFVKKLDFAFLSLGGPSHGARVWYLGRVPKHRNQGQEVEGLLFSLQNSQLVHILSF
Ga0268337_10105861	3300028469	Phyllosphere	MFNGSFLRVCRILRFVKKLDFAFLSLGGPSHGAQVWCLGRVPKHRNHWQEVEGLLFNPKNYQLVHIFSFHY
Ga0268307_10139701	3300028470	Phyllosphere	MFNGSFLRVCRILWFVKKLDFAFLSLGGPRHGARVWCLDCVPKPRNQWQEVEGLLFIPQNSQLVHILSFPS
Ga0268315_10116081	3300028472	Phyllosphere	MLNGSILRVCRILRFVKKLDFAFFSLGGPSHGARVWCLGRVPKHRNQWQEVEGLLFGPQNSQLVHILSFHSYGVV
Ga0268305_1122101	3300028525	Phyllosphere	MFNGSLLRVCRILQFLKKLDFAFLSLGGLSHGARVWCLGRVLKHRNQWQEVEGLLFSPQNSQLVHILSFHSKAVVSLFIFPTG
Ga0268311_10201431	3300028529	Phyllosphere	MFNGSFLSVCRILWFVKQLDFAFMSLGGPSHGTRVWCLGRVPKHRNHWQEVEGLLFSPQNSQLVHILSFHS
Ga0268311_10226491	3300028529	Phyllosphere	MFDGSFLGVCRILRFVKKLDFAFLSLGGPRHGVWVWCLGRVPKHRNLWQEVEGLLFSPQNTQLVHILSFHS
Ga0268311_10274591	3300028529	Phyllosphere	MFNGSFLRVCRILWFVKKLDFAFLSPGGPSHGARVWCLGRVPKDRNQWQELEGLLFSPQNRQLV
Ga0214493_10542641	3300032465	Switchgrass Phyllosphere	MFNGSFLRVCRILRFVKKLDFAFLSLGGPRHGARVWCLGRVPKHRNQWQELEGWLFSPQNSQLVHIL

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F038060

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign