Metagenome / Metatranscriptome Family F038169

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F038169
Family Type	Metagenome / Metatranscriptome
Number of Sequences	166
Average Sequence Length	55 residues
Representative Sequence	MHSGGGFGIFGMGVLFEEMGAEQHSAIGAWLRKLAGRPGKDLGKNSFSQIRG
Number of Associated Samples	98
Number of Associated Scaffolds	166

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	3.03 %
% of genes near scaffold ends (potentially truncated)	94.58 %
% of genes from short scaffolds (< 2000 bps)	86.75 %
Associated GOLD sequencing projects	82
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (95.181 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (65.060 % of family members)
Environment Ontology (ENVO)	Unclassified (63.855 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (65.663 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 18.75% β-sheet: 7.50% Coil/Unstructured: 73.75%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 166 Family Scaffolds
PF07593	UnbV_ASPIC	3.61
PF02446	Glyco_hydro_77	3.01
PF07238	PilZ	3.01
PF01850	PIN	2.41
PF08241	Methyltransf_11	2.41
PF16697	Yop-YscD_cpl	1.81
PF13429	TPR_15	1.81
PF13545	HTH_Crp_2	1.20
PF13620	CarboxypepD_reg	1.20
PF13551	HTH_29	1.20
PF02388	FemAB	1.20
PF00498	FHA	1.20
PF13899	Thioredoxin_7	1.20
PF00072	Response_reg	0.60
PF04365	BrnT_toxin	0.60
PF03551	PadR	0.60
PF13489	Methyltransf_23	0.60
PF02669	KdpC	0.60
PF07992	Pyr_redox_2	0.60
PF08818	DUF1801	0.60
PF02371	Transposase_20	0.60
PF13784	Fic_N	0.60
PF02661	Fic	0.60
PF00005	ABC_tran	0.60
PF12700	HlyD_2	0.60
PF13427	DUF4111	0.60
PF00593	TonB_dep_Rec	0.60
PF07690	MFS_1	0.60
PF04366	Ysc84	0.60
PF06250	YhcG_C	0.60
PF02597	ThiS	0.60
PF13365	Trypsin_2	0.60

COG ID	Name	Functional Category	% Frequency in 166 Family Scaffolds
COG1640	4-alpha-glucanotransferase	Carbohydrate transport and metabolism [G]	3.01
COG2348	Lipid II:glycine glycyltransferase (Peptidoglycan interpeptide bridge formation enzyme)	Cell wall/membrane/envelope biogenesis [M]	1.20
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.60
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.60
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.60
COG1977	Molybdopterin synthase sulfur carrier subunit MoaD	Coenzyme transport and metabolism [H]	0.60
COG2104	Sulfur carrier protein ThiS (thiamine biosynthesis)	Coenzyme transport and metabolism [H]	0.60
COG2156	K+-transporting ATPase, KdpC subunit	Inorganic ion transport and metabolism [P]	0.60
COG2929	Ribonuclease BrnT, toxin component of the BrnT-BrnA toxin-antitoxin system	Defense mechanisms [V]	0.60
COG2930	Lipid-binding SYLF domain, Ysc84/FYVE family	Lipid transport and metabolism [I]	0.60
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.60
COG4430	Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family	Function unknown [S]	0.60
COG4804	Predicted nuclease of restriction endonuclease-like (RecB) superfamily, DUF1016 family	General function prediction only [R]	0.60
COG5646	Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)	Posttranslational modification, protein turnover, chaperones [O]	0.60
COG5649	Uncharacterized conserved protein, DUF1801 domain	Function unknown [S]	0.60

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.18 %
Unclassified	root	N/A	4.82 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.18 %
Unclassified	root	N/A	4.82 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	95.18 %
Unclassified	root	N/A	4.82 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	77.11 %
Unclassified	root	N/A	4.82 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.60 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.60 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	24.70 %
Unclassified	root	N/A	4.82 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.20 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.60 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.60 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	24.70 %
Unclassified	root	N/A	4.82 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.20 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.60 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.60 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	24.70 %
Unclassified	root	N/A	4.82 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.20 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.60 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.60 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	24.70 %
Unclassified	root	N/A	4.82 %
Verrucomicrobia subdivision 3	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3	0.60 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.60 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.60 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	24.70 %
Unclassified	root	N/A	4.82 %
Pedosphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera	0.60 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.60 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.60 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	24.70 %
Unclassified	root	N/A	4.82 %
Pedosphaera parvula	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	0.60 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.60 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.60 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001661\|JGI12053J15887_10074038	All Organisms → cellular organisms → Bacteria	1882	Open in IMG/M
3300002886\|JGI25612J43240_1034961	All Organisms → cellular organisms → Bacteria → Acidobacteria	725	Open in IMG/M
3300002914\|JGI25617J43924_10232849	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	618	Open in IMG/M
3300002914\|JGI25617J43924_10234122	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	617	Open in IMG/M
3300002915\|JGI25387J43893_1076150	All Organisms → cellular organisms → Bacteria → Acidobacteria	503	Open in IMG/M
3300002917\|JGI25616J43925_10008155	All Organisms → cellular organisms → Bacteria → Proteobacteria	4554	Open in IMG/M
3300005167\|Ga0066672_10482616	All Organisms → cellular organisms → Bacteria → Acidobacteria	806	Open in IMG/M
3300005176\|Ga0066679_10777303	All Organisms → cellular organisms → Bacteria → Acidobacteria	613	Open in IMG/M
3300005177\|Ga0066690_10837430	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	594	Open in IMG/M
3300005178\|Ga0066688_10299636	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1037	Open in IMG/M
3300005180\|Ga0066685_10024331	All Organisms → cellular organisms → Bacteria	3678	Open in IMG/M
3300005180\|Ga0066685_10666050	All Organisms → cellular organisms → Bacteria → Acidobacteria	715	Open in IMG/M
3300005181\|Ga0066678_10335643	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	995	Open in IMG/M
3300005518\|Ga0070699_100984272	All Organisms → cellular organisms → Bacteria → Acidobacteria	773	Open in IMG/M
3300005556\|Ga0066707_10558052	All Organisms → cellular organisms → Bacteria → Acidobacteria	737	Open in IMG/M
3300005560\|Ga0066670_10069872	All Organisms → cellular organisms → Bacteria → Acidobacteria	1884	Open in IMG/M
3300005560\|Ga0066670_10080944	Not Available	1772	Open in IMG/M
3300005586\|Ga0066691_10471313	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300005598\|Ga0066706_10385775	All Organisms → cellular organisms → Bacteria → Acidobacteria	1114	Open in IMG/M
3300005598\|Ga0066706_10577868	All Organisms → cellular organisms → Bacteria	892	Open in IMG/M
3300006796\|Ga0066665_10670196	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	823	Open in IMG/M
3300007258\|Ga0099793_10107793	All Organisms → cellular organisms → Bacteria → Acidobacteria	1293	Open in IMG/M
3300007258\|Ga0099793_10437072	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	646	Open in IMG/M
3300009012\|Ga0066710_103157011	All Organisms → cellular organisms → Bacteria → Acidobacteria	635	Open in IMG/M
3300009038\|Ga0099829_10193717	All Organisms → cellular organisms → Bacteria → Acidobacteria	1642	Open in IMG/M
3300009038\|Ga0099829_10997584	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	694	Open in IMG/M
3300009088\|Ga0099830_10353370	All Organisms → cellular organisms → Bacteria	1182	Open in IMG/M
3300009088\|Ga0099830_10917514	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	724	Open in IMG/M
3300009088\|Ga0099830_10979522	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	700	Open in IMG/M
3300009143\|Ga0099792_10195003	All Organisms → cellular organisms → Bacteria	1148	Open in IMG/M
3300010303\|Ga0134082_10217679	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	785	Open in IMG/M
3300010320\|Ga0134109_10039102	All Organisms → cellular organisms → Bacteria → Acidobacteria	1538	Open in IMG/M
3300010322\|Ga0134084_10428410	All Organisms → cellular organisms → Bacteria → Acidobacteria	522	Open in IMG/M
3300010325\|Ga0134064_10015456	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2109	Open in IMG/M
3300010326\|Ga0134065_10294169	Not Available	620	Open in IMG/M
3300011269\|Ga0137392_11509893	All Organisms → cellular organisms → Bacteria → Acidobacteria	531	Open in IMG/M
3300011271\|Ga0137393_10076794	All Organisms → cellular organisms → Bacteria → Acidobacteria	2678	Open in IMG/M
3300011271\|Ga0137393_11094779	All Organisms → cellular organisms → Bacteria → Acidobacteria	677	Open in IMG/M
3300012096\|Ga0137389_10928952	All Organisms → cellular organisms → Bacteria → Acidobacteria	746	Open in IMG/M
3300012189\|Ga0137388_11663576	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	573	Open in IMG/M
3300012198\|Ga0137364_10975662	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300012198\|Ga0137364_11266038	All Organisms → cellular organisms → Bacteria → Acidobacteria	550	Open in IMG/M
3300012198\|Ga0137364_11266340	All Organisms → cellular organisms → Bacteria → Acidobacteria	550	Open in IMG/M
3300012198\|Ga0137364_11322834	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300012200\|Ga0137382_10097791	All Organisms → cellular organisms → Bacteria → Acidobacteria	1932	Open in IMG/M
3300012200\|Ga0137382_10454403	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	907	Open in IMG/M
3300012200\|Ga0137382_10609032	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	780	Open in IMG/M
3300012202\|Ga0137363_10138939	All Organisms → cellular organisms → Bacteria → Acidobacteria	1897	Open in IMG/M
3300012202\|Ga0137363_10454641	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1072	Open in IMG/M
3300012202\|Ga0137363_10496351	All Organisms → cellular organisms → Bacteria → Acidobacteria	1025	Open in IMG/M
3300012202\|Ga0137363_10841274	All Organisms → cellular organisms → Bacteria → Acidobacteria	779	Open in IMG/M
3300012202\|Ga0137363_11151940	All Organisms → cellular organisms → Bacteria → Acidobacteria	660	Open in IMG/M
3300012203\|Ga0137399_10667477	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	875	Open in IMG/M
3300012203\|Ga0137399_10689606	All Organisms → cellular organisms → Bacteria → Acidobacteria	860	Open in IMG/M
3300012203\|Ga0137399_11061209	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	682	Open in IMG/M
3300012203\|Ga0137399_11420398	All Organisms → cellular organisms → Bacteria → Acidobacteria	580	Open in IMG/M
3300012203\|Ga0137399_11519323	All Organisms → cellular organisms → Bacteria → Acidobacteria	557	Open in IMG/M
3300012203\|Ga0137399_11590387	All Organisms → cellular organisms → Bacteria → Acidobacteria	541	Open in IMG/M
3300012203\|Ga0137399_11747809	All Organisms → cellular organisms → Bacteria → Acidobacteria	510	Open in IMG/M
3300012205\|Ga0137362_10243589	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1552	Open in IMG/M
3300012205\|Ga0137362_10525362	All Organisms → cellular organisms → Bacteria → Acidobacteria	1023	Open in IMG/M
3300012205\|Ga0137362_11009752	All Organisms → cellular organisms → Bacteria → Acidobacteria	708	Open in IMG/M
3300012207\|Ga0137381_10124276	All Organisms → cellular organisms → Bacteria	2206	Open in IMG/M
3300012207\|Ga0137381_11715962	All Organisms → cellular organisms → Bacteria → Acidobacteria	518	Open in IMG/M
3300012210\|Ga0137378_10369983	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1331	Open in IMG/M
3300012211\|Ga0137377_11397445	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300012211\|Ga0137377_11415925	All Organisms → cellular organisms → Bacteria → Acidobacteria	623	Open in IMG/M
3300012285\|Ga0137370_10168701	All Organisms → cellular organisms → Bacteria → Acidobacteria	1273	Open in IMG/M
3300012349\|Ga0137387_10930310	All Organisms → cellular organisms → Bacteria → Acidobacteria	627	Open in IMG/M
3300012361\|Ga0137360_10913913	All Organisms → cellular organisms → Bacteria → Acidobacteria	757	Open in IMG/M
3300012361\|Ga0137360_11861057	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	508	Open in IMG/M
3300012362\|Ga0137361_10581964	All Organisms → cellular organisms → Bacteria	1026	Open in IMG/M
3300012362\|Ga0137361_11417955	All Organisms → cellular organisms → Bacteria → Acidobacteria	618	Open in IMG/M
3300012363\|Ga0137390_10756241	All Organisms → cellular organisms → Bacteria	931	Open in IMG/M
3300012582\|Ga0137358_10014493	All Organisms → cellular organisms → Bacteria	4976	Open in IMG/M
3300012582\|Ga0137358_10234677	All Organisms → cellular organisms → Bacteria → Acidobacteria	1249	Open in IMG/M
3300012582\|Ga0137358_10323212	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1046	Open in IMG/M
3300012582\|Ga0137358_10334656	All Organisms → cellular organisms → Bacteria → Acidobacteria	1026	Open in IMG/M
3300012582\|Ga0137358_10874628	All Organisms → cellular organisms → Bacteria → Acidobacteria	591	Open in IMG/M
3300012582\|Ga0137358_10944831	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	562	Open in IMG/M
3300012582\|Ga0137358_11009744	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	537	Open in IMG/M
3300012917\|Ga0137395_10167032	All Organisms → cellular organisms → Bacteria → Acidobacteria	1516	Open in IMG/M
3300012917\|Ga0137395_10842115	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	664	Open in IMG/M
3300012918\|Ga0137396_10121970	All Organisms → cellular organisms → Bacteria	1879	Open in IMG/M
3300012918\|Ga0137396_11035775	All Organisms → cellular organisms → Bacteria → Acidobacteria	592	Open in IMG/M
3300012918\|Ga0137396_11041055	All Organisms → cellular organisms → Bacteria → Acidobacteria	590	Open in IMG/M
3300012922\|Ga0137394_10765729	All Organisms → cellular organisms → Bacteria → Acidobacteria	810	Open in IMG/M
3300012923\|Ga0137359_10063656	All Organisms → cellular organisms → Bacteria → Acidobacteria	3216	Open in IMG/M
3300012923\|Ga0137359_10776169	All Organisms → cellular organisms → Bacteria → Acidobacteria	831	Open in IMG/M
3300012923\|Ga0137359_11280340	All Organisms → cellular organisms → Bacteria → Acidobacteria	621	Open in IMG/M
3300012924\|Ga0137413_11255512	All Organisms → cellular organisms → Bacteria → Acidobacteria	593	Open in IMG/M
3300012924\|Ga0137413_11425380	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300012924\|Ga0137413_11782109	All Organisms → cellular organisms → Bacteria → Acidobacteria	508	Open in IMG/M
3300012925\|Ga0137419_10003522	All Organisms → cellular organisms → Bacteria → Acidobacteria	7486	Open in IMG/M
3300012925\|Ga0137419_10009837	All Organisms → cellular organisms → Bacteria → Acidobacteria	5113	Open in IMG/M
3300012925\|Ga0137419_10296261	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1235	Open in IMG/M
3300012925\|Ga0137419_10805916	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	768	Open in IMG/M
3300012925\|Ga0137419_11076228	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	669	Open in IMG/M
3300012925\|Ga0137419_11324349	All Organisms → cellular organisms → Bacteria → Acidobacteria	606	Open in IMG/M
3300012927\|Ga0137416_10440820	All Organisms → cellular organisms → Bacteria	1111	Open in IMG/M
3300012927\|Ga0137416_11107588	All Organisms → cellular organisms → Bacteria	710	Open in IMG/M
3300012927\|Ga0137416_11510848	All Organisms → cellular organisms → Bacteria → Acidobacteria	610	Open in IMG/M
3300012927\|Ga0137416_11920532	All Organisms → cellular organisms → Bacteria → Acidobacteria	542	Open in IMG/M
3300012929\|Ga0137404_11253627	All Organisms → cellular organisms → Bacteria → Acidobacteria	683	Open in IMG/M
3300012930\|Ga0137407_10144176	All Organisms → cellular organisms → Bacteria → Acidobacteria	2098	Open in IMG/M
3300012930\|Ga0137407_12060840	All Organisms → cellular organisms → Bacteria → Acidobacteria	545	Open in IMG/M
3300012944\|Ga0137410_10303056	All Organisms → cellular organisms → Bacteria → Acidobacteria	1266	Open in IMG/M
3300012944\|Ga0137410_11401523	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	607	Open in IMG/M
3300012944\|Ga0137410_11707139	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	554	Open in IMG/M
3300014157\|Ga0134078_10052800	All Organisms → cellular organisms → Bacteria → Acidobacteria	1412	Open in IMG/M
3300014166\|Ga0134079_10095876	All Organisms → cellular organisms → Bacteria	1125	Open in IMG/M
3300015051\|Ga0137414_1205799	All Organisms → cellular organisms → Bacteria → Acidobacteria	4478	Open in IMG/M
3300015053\|Ga0137405_1276849	All Organisms → cellular organisms → Bacteria → Acidobacteria	591	Open in IMG/M
3300015054\|Ga0137420_1338246	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1081	Open in IMG/M
3300015241\|Ga0137418_10203999	All Organisms → cellular organisms → Bacteria → Acidobacteria	1706	Open in IMG/M
3300015245\|Ga0137409_10133390	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	2281	Open in IMG/M
3300015264\|Ga0137403_10012753	All Organisms → cellular organisms → Bacteria → Acidobacteria	9198	Open in IMG/M
3300015264\|Ga0137403_10098014	All Organisms → cellular organisms → Bacteria → Acidobacteria	2942	Open in IMG/M
3300015264\|Ga0137403_10369561	All Organisms → cellular organisms → Bacteria → Acidobacteria	1318	Open in IMG/M
3300015264\|Ga0137403_10970311	All Organisms → cellular organisms → Bacteria → Acidobacteria	698	Open in IMG/M
3300017659\|Ga0134083_10188434	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	848	Open in IMG/M
3300018468\|Ga0066662_10905051	All Organisms → cellular organisms → Bacteria → Acidobacteria	866	Open in IMG/M
3300018482\|Ga0066669_10721939	All Organisms → cellular organisms → Bacteria → Acidobacteria	878	Open in IMG/M
3300018482\|Ga0066669_10895542	All Organisms → cellular organisms → Bacteria → Acidobacteria	794	Open in IMG/M
3300020004\|Ga0193755_1145108	All Organisms → cellular organisms → Bacteria → Acidobacteria	724	Open in IMG/M
3300020018\|Ga0193721_1077675	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	862	Open in IMG/M
3300020199\|Ga0179592_10441584	All Organisms → cellular organisms → Bacteria → Acidobacteria	563	Open in IMG/M
3300020199\|Ga0179592_10505029	Not Available	517	Open in IMG/M
3300020199\|Ga0179592_10506895	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	516	Open in IMG/M
3300021088\|Ga0210404_10026516	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2552	Open in IMG/M
3300021170\|Ga0210400_11293738	Not Available	584	Open in IMG/M
3300021171\|Ga0210405_10116091	All Organisms → cellular organisms → Bacteria → Acidobacteria	2114	Open in IMG/M
3300024288\|Ga0179589_10307226	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300024330\|Ga0137417_1051123	Not Available	1255	Open in IMG/M
3300026317\|Ga0209154_1258738	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	594	Open in IMG/M
3300026328\|Ga0209802_1285185	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	550	Open in IMG/M
3300026333\|Ga0209158_1238088	All Organisms → cellular organisms → Bacteria → Acidobacteria	625	Open in IMG/M
3300026359\|Ga0257163_1016407	All Organisms → cellular organisms → Bacteria → Acidobacteria	1138	Open in IMG/M
3300026515\|Ga0257158_1125325	All Organisms → cellular organisms → Bacteria → Acidobacteria	517	Open in IMG/M
3300026530\|Ga0209807_1008885	All Organisms → cellular organisms → Bacteria	4956	Open in IMG/M
3300026552\|Ga0209577_10044946	All Organisms → cellular organisms → Bacteria	3759	Open in IMG/M
3300026555\|Ga0179593_1112401	Not Available	2294	Open in IMG/M
3300026557\|Ga0179587_10708570	All Organisms → cellular organisms → Bacteria → Acidobacteria	663	Open in IMG/M
3300026557\|Ga0179587_10990706	All Organisms → cellular organisms → Bacteria → Acidobacteria	553	Open in IMG/M
3300027643\|Ga0209076_1092921	All Organisms → cellular organisms → Bacteria → Acidobacteria	857	Open in IMG/M
3300027643\|Ga0209076_1156872	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	635	Open in IMG/M
3300027651\|Ga0209217_1004736	All Organisms → cellular organisms → Bacteria	4545	Open in IMG/M
3300027846\|Ga0209180_10185367	All Organisms → cellular organisms → Bacteria → Acidobacteria	1201	Open in IMG/M
3300027862\|Ga0209701_10242525	All Organisms → cellular organisms → Bacteria → Acidobacteria	1057	Open in IMG/M
3300027882\|Ga0209590_10198375	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1267	Open in IMG/M
3300027882\|Ga0209590_10740026	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	627	Open in IMG/M
3300027903\|Ga0209488_10315637	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1165	Open in IMG/M
3300027903\|Ga0209488_11087546	Not Available	547	Open in IMG/M
3300028047\|Ga0209526_10005445	All Organisms → cellular organisms → Bacteria	8681	Open in IMG/M
3300028047\|Ga0209526_10697003	All Organisms → cellular organisms → Bacteria → Acidobacteria	640	Open in IMG/M
3300028884\|Ga0307308_10080027	All Organisms → cellular organisms → Bacteria	1548	Open in IMG/M
3300029636\|Ga0222749_10139852	All Organisms → cellular organisms → Bacteria → Acidobacteria	1171	Open in IMG/M
3300030991\|Ga0073994_10018986	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	641	Open in IMG/M
3300031057\|Ga0170834_102819704	All Organisms → cellular organisms → Bacteria → Acidobacteria	1153	Open in IMG/M
3300031231\|Ga0170824_127704062	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300031474\|Ga0170818_107596440	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300031474\|Ga0170818_115322993	All Organisms → cellular organisms → Bacteria	934	Open in IMG/M
3300031720\|Ga0307469_10957095	All Organisms → cellular organisms → Bacteria	797	Open in IMG/M
3300031720\|Ga0307469_12201478	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	537	Open in IMG/M
3300032180\|Ga0307471_102493308	All Organisms → cellular organisms → Bacteria → Acidobacteria	654	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	96.99%
Loam	Environmental → Terrestrial → Soil → Loam	3.01%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	71.69%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	16.87%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	8.43%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.41%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.60%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	65.06%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	11.45%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.42%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	4.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.22%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.41%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.81%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.81%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.60%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002886	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300002915	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300015051	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300020018	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026359	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-A	Environmental	Open in IMG/M
3300026515	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-A	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030991	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12053J15887_100740382	3300001661	Forest Soil	MSTCELPGKVIYMHSGGGFGIFGMGVLFGEMSPEQQSTIDAWLRGLAGRPGGDLGKNSFSQIRG*
JGI25612J43240_10349612	3300002886	Grasslands Soil	TCELHGKVLYMHSGGGFGIFGMGVLFEEMSAEQHSTIDAWLRVLAGRAGKDLGKTFFSQCSHISG*
JGI25617J43924_102328491	3300002914	Grasslands Soil	IFGMGVLFEEMGPEQHSTIGAWLRKLAGRPGKDLGKNSFSQITG*
JGI25617J43924_102341222	3300002914	Grasslands Soil	IFGMGVLFEEMGPEQHSTIGAWLRKLAGRPGKDLGKNSFSQIRG*
JGI25387J43893_10761502	3300002915	Grasslands Soil	ISDGTSACELRGKVLYLHSGGGFGIFGMGLVFEEMGAEQHSAIDAWVRRLARRPAADVQQSSFS*
JGI25616J43925_100081555	3300002917	Grasslands Soil	HSGGGFGIFGMGVLFEEMGTEQHSAIDGWLRDLAVRQGKELGNNSFSQIRG*
Ga0066672_104826162	3300005167	Soil	DGTSTCELHGKVIYMHSGGGFGIFGMGVLFEEMDAEQRSAIEKWLRELAAQARKDLGNNPASRIRG*
Ga0066679_107773031	3300005176	Soil	ELQGKVIYMHSGGGFGIFGMGVLFEEMDAEQRSAIEAWLRGLAAQAKKDLGDNTVSQIRG
Ga0066690_108374301	3300005177	Soil	GMSTCELDGKVIYMHSGGGFGIFGVGVLFEEMDAEQRSAVEAWLRELAGHAGKDLGLNSEAQKPG*
Ga0066688_102996361	3300005178	Soil	DGTSKCDVQGRVLYMHSGGGFGIFGMGVLFEEMEAEQKFAIDKWLRELAVRQGNDLRNNSFSQVK*
Ga0066685_100243315	3300005180	Soil	HSGGGFGIFGMGVLFEEMDAEQRSAIEAWLRGLAAQAKKDVGDNTVSQIRG*
Ga0066685_106660502	3300005180	Soil	HSGGGFGIFGMGVLFEEMDAEQRSAIEAWLRGLAAQAKKDLGDNTVSQIRG*
Ga0066678_103356432	3300005181	Soil	GFGIFGMGVLFEEMEAEQKFAIDKWLRELAVRQGNDLRNNSFSQVK*
Ga0070699_1009842721	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MNTCELHGKVLYLHSGGGFGIFGMGVVFEEMDADQQSAIGAWLRGLAGRPGKDSAKDSFSQSRI*
Ga0066707_105580522	3300005556	Soil	MHSGGGFGIFGMGVLFEEMGAEQHSAIGAWLRKLAGRPGKDLGKNSFSQIRG*
Ga0066670_100698724	3300005560	Soil	QGKVIYMHSGGGFGIFGMGVLFEEMDAEQRSAIEAWLRGLAAQAKKDLGDNTVSQIRG*
Ga0066670_100809441	3300005560	Soil	SDGTSTCELHGKVIYMHSGGGFGIFGMGVLFEEMDAEQRSAIEKWLRELAAQARKDLGNNPASRIRG*
Ga0066691_104713132	3300005586	Soil	GKVIYMHSGGGFGIFGMGVLFEEMSAEQHSAIDAWLRGLAAHPGKDLGKNSLLSNQRLRPA*
Ga0066706_103857752	3300005598	Soil	SDGISTCELGGKVIYLHSGGGFGIFGMGVVFEEMGAEQQAAIEAWLRGLAGRPGKDSATNSSSQVRG*
Ga0066706_105778681	3300005598	Soil	HGKVIYVHSGGGFGIFGMGVLFEEMDSEQRSAIDAWLRGLAAYTGEDSGKNSFSQIGLRPA*
Ga0066665_106701962	3300006796	Soil	KVIYIHSGGGFGIFGMGVLFGEMGPEQQSTIDAWLRRLDGRPGRDLGKNSFSQIRG*
Ga0099793_101077931	3300007258	Vadose Zone Soil	FGIFGMGVLFEEMGPEQHSTIEAWLGGLARHPGKGLGNASSSQIRG*
Ga0099793_104370721	3300007258	Vadose Zone Soil	LDGKVIYMHSGGGFGIFGVGVLFEEMDAEQRTAVEAWLRELAGHAGKDVGMNSEAQKPG*
Ga0066710_1031570111	3300009012	Grasslands Soil	MHSGGGFGIFGMGVLFEEMDAEQRSAIEAWLRGLAAQAKKDLGDNTVSQIRG
Ga0099829_101937171	3300009038	Vadose Zone Soil	GKVLYMHSGGGFGIFGMGVLFEEMGAEQHSSIDAWLRKLARRPGKDLGKNSFSQIRG*
Ga0099829_109975841	3300009038	Vadose Zone Soil	GKVLYMHSGGGFGIFGMGVLFEEMGAEQHSSIDAWLRKLAKRPGKDLGKNSFSQIKG*
Ga0099830_103533701	3300009088	Vadose Zone Soil	KVIYMHSGGGFGIFGVGVLFEEMDPEQRSAVEAWLRELARHPGKDAGMDSEAQKPG*
Ga0099830_109175141	3300009088	Vadose Zone Soil	KVLYMHSGGGFGIFGMGVLFGEMGPEQQSTIDAWLRRLAGRPGRDLGKNSFSQIRG*
Ga0099830_109795221	3300009088	Vadose Zone Soil	IFGMGVLFEEMGAEQHSSIDAWLRKLAGRPGKDLGKNSFSQIRG*
Ga0099792_101950031	3300009143	Vadose Zone Soil	MSTCELDGKVIYMHSGGGFGIFGVGVLFEEMDPEQRSAVEAWLRELARHPGKDAGMDSEAQKLG*
Ga0134082_102176792	3300010303	Grasslands Soil	IFGMGVLFGEMGPEQQSTIDAWLRRLGGRPGRDLGKNSFSQIRG*
Ga0134109_100391021	3300010320	Grasslands Soil	DGTSTCELHGKVIYMYSGGGFGIFGMGVLFEEMDAEQRSAIEKWLRELAAQARKDLGNNPASRIRG*
Ga0134084_104284102	3300010322	Grasslands Soil	HSGGGFGIFGMGVLFEEMDSEQRSAIDAWLRGLAAYPGEDSGKDSFSQSG*
Ga0134064_100154561	3300010325	Grasslands Soil	HGKVIYMHSGGGFGIFGMGVLFEEMDAEQRSAIEKWLRELAAQARKDLGNNPASRIRG*
Ga0134065_102941693	3300010326	Grasslands Soil	SKCDVQGRVLYMHSGGGFGIFGMGVLFEEMEAEQKFAIDKWLRELAVRQGNDLRNNSFSQVK*
Ga0137392_115098931	3300011269	Vadose Zone Soil	GMGVLFEEMGAEQHSSIDAWLRKLAGRPGQDLGKNSFSQIRG*
Ga0137393_100767941	3300011271	Vadose Zone Soil	VFEEMGAEQQSAIEAWLRGLAGRPGKDSANNPFPQPRS*
Ga0137393_110947791	3300011271	Vadose Zone Soil	VLFEEMGPEQHSTIGAWLRKLAGRPGKDQGKNSFSQIRG*
Ga0137389_109289521	3300012096	Vadose Zone Soil	VNEKVLYMHSGGGFGIFGMGVLFEEMGAEQHSSIDAWLRKLAGRPGKDLGKNSLSQIRG*
Ga0137388_116635762	3300012189	Vadose Zone Soil	GGFGIFGMGVLFEEMGAEQHSAIGAWLRKLAGRPGKDLGKNSFSQIRG*
Ga0137364_109756621	3300012198	Vadose Zone Soil	CEVHGKVIYVHSGGGFGIFGMGVLFEEMDSEQRSAIDAWLRGLAAYTGEDSGKDSFSQIVLRPA*
Ga0137364_112660381	3300012198	Vadose Zone Soil	PGKVIYIHSGGGFGIFGMGVLFGEMGPEQQSTIDAWLRRLDGRPGRDLGKNSFSQIRG*
Ga0137364_112663401	3300012198	Vadose Zone Soil	PGKVIYIHSGGGFGIFGMGVLFGEMGPEQQSTIDAWLRRLGGRPGRDLGKNSFSQIRG*
Ga0137364_113228341	3300012198	Vadose Zone Soil	CEVHGKVIYVHSGGGFGIFGMGVLFEEMDSEQRSAIDAWLRGLAAYPGEDSGKNSFSQIGLRPA*
Ga0137382_100977911	3300012200	Vadose Zone Soil	LRLRICDGMSTCELDGKVIYMHSGGGFGIFGVGVLFEEMDPEQRSAVEAWLRELARHPGKDAGMDSEAQKSG*
Ga0137382_104544032	3300012200	Vadose Zone Soil	CDGTSKCDVQGRVLYMHSGGGFGIFGMGVLFEEMEAEQKFAIDKWLRELAVRQGNDLRNNSFSQVK*
Ga0137382_106090321	3300012200	Vadose Zone Soil	LRLRICDGMSTCELDGKVIYMHSGGGFGIFGVGVLFEEMDPEQRSAVEAWLRELARHPGKDAGMDSEAQKPG*
Ga0137363_101389391	3300012202	Vadose Zone Soil	LYMHSGGGFGIFGMGVLFEEMGPEQHSTIHGWLDKLAGRPGKDLGKTSFSQIRG*
Ga0137363_104546411	3300012202	Vadose Zone Soil	TCELNGKVIYMHSGGGFGIFGVGVLFEEMDAEQRSAVEAWLRELARHSGKDAAMDSEAQKPG*
Ga0137363_104963511	3300012202	Vadose Zone Soil	GFGIFGMGVLFEEMGAEQHSAIGAWLRELAGRPRKDLGKNSFSQIRG*
Ga0137363_108412741	3300012202	Vadose Zone Soil	GIFGMGVLFEEMGAEQHSTINAWLSGLAGQSGKNLRKNSFSQIRD*
Ga0137363_111519401	3300012202	Vadose Zone Soil	GMNTCELHGKVLYMHSGGGFGIFGMGVLFEEMGAEEHSAIDAWIRGLAGQPRKDSGKSPFSQIRG*
Ga0137399_106674771	3300012203	Vadose Zone Soil	CELDGKVIYMHSGGGFGIFGVGVLFEEMDPKQRSAVEAWLRELARHPGKDAGMDSEAQKPG*
Ga0137399_106896063	3300012203	Vadose Zone Soil	GVLFEEMGAEQHSAIGAWLRKLAGRPGKDSGKNSFSQIRG*
Ga0137399_110612091	3300012203	Vadose Zone Soil	KVIYMHSGGGFGIFGVGVLFEEMDAEQRTAVEAWLRELAGPAGKDVGMNSEAQKQG*
Ga0137399_114203982	3300012203	Vadose Zone Soil	GGGFGIFGMGVLFEEMGAEQHSAIGAWLHKLAGRPGKDSGKNSFSQIRG*
Ga0137399_115193231	3300012203	Vadose Zone Soil	RGCYIETLKPILMGTELLLSICDGLNTNELHGKVIYVQSGGGLGLFGMGVQFGEMGAEQHSVIDAWLRELAGNRGKVLGKNSELQNPD*
Ga0137399_115903871	3300012203	Vadose Zone Soil	HSGGGFGIFGMGVLFEEMGAEQHSAIGAWLRKLAGRPGKDLGKNSFSQIRG*
Ga0137399_117478092	3300012203	Vadose Zone Soil	HSGGGFGIFGMGVLFGEMGPEQHSTIDAWLRRLAGRPGRDLGKNSFSQIRG*
Ga0137362_102435891	3300012205	Vadose Zone Soil	LHGKVLYMHSGGGFGIFGMGVLFEEMGPEQHSTIDAWLRKLSRRPGKDLGKTSSLKSGAKSR*
Ga0137362_105253621	3300012205	Vadose Zone Soil	KVLYMHSGGGFGIFGMGVLFEEMGPEQHSAIDAWLRRLAGHPGKDLGKTSFSQIRG*
Ga0137362_110097521	3300012205	Vadose Zone Soil	GKVLYMHSGGGFGIFGMGVLFEEMGPEQHSTIGAWLRKLAGRPGKDLGKNSFSQIRG*
Ga0137381_101242765	3300012207	Vadose Zone Soil	HSGGGFGIFGMGVLFGEMGPEQQSTIDAWLRRLDGRPGRDLGKNSFSQIRG*
Ga0137381_117159622	3300012207	Vadose Zone Soil	HSGGGFGIFGMGVLFEEMGAEQHSSIDAWLRKLAGRPGKDFGKNSFSQIKG*
Ga0137378_103699833	3300012210	Vadose Zone Soil	FGIFGMGVLFGEMGPEQQSTIDAWLRRLDGRPGRDLGKNSFSQIRG*
Ga0137377_113974452	3300012211	Vadose Zone Soil	GKVIYVHSGGGFGIFGMGVLFEEMDSEQRSAIDAWLRGLAAYPGEDSGKNSFSQIGLRPA
Ga0137377_114159251	3300012211	Vadose Zone Soil	GKVIYVHSGGGFGIFGMGVLFEEMDAEQHSAIDAWLRGLAAYPGEDSGKNSFSQIRLRPA
Ga0137370_101687011	3300012285	Vadose Zone Soil	SGGGLGIFGMGVLFGDLGAEQHSAIDAWLHRLAGQPGKNSGKHSFTQIRV*
Ga0137387_109303101	3300012349	Vadose Zone Soil	IYMHSGGGLGIFGMGVLFGDMGAGQHTAIDAWLHRLAGQTGKNSGKHSFTQIRG*
Ga0137360_109139132	3300012361	Vadose Zone Soil	TCELHGKVLYMHSGGGFGIFGMGVLFEEMGAEQHSAIDAWLHGLAGHSRKDSGKNPFSQIRG*
Ga0137360_118610571	3300012361	Vadose Zone Soil	MSTCELDGKVIYMHSGGGFGIFGVGVLFEEMDPEQRSAVEAWLRELARHPGKDAGMDSEAQKPG*
Ga0137361_105819643	3300012362	Vadose Zone Soil	LHGKVLYMHSGGGFGIFGMGVLFEEMGAEQHSAIDAWLHGLAGHSRKDSGKNPFSQIRG*
Ga0137361_114179552	3300012362	Vadose Zone Soil	GMGVLFEEMGAEQHSAIGAWLRKLAGRPGKDLGKNSFSQIRG*
Ga0137390_107562412	3300012363	Vadose Zone Soil	NTCELHGKVLYMHSGGGFGIFGMGVLFEEMGAEQHSSIDAWLRKLAGRPGKDLGKNSLSQIRG*
Ga0137358_100144931	3300012582	Vadose Zone Soil	ELHGKVLYMHSGGGFGIFGMGVLFEEMGPEQHSTIRGWLNKLAGRPGKDLGKTSFSQIRG
Ga0137358_102346771	3300012582	Vadose Zone Soil	LYGKVIYMHCGGGFGIFGMGVVFEKMGAEQQSAIETWLCGLARPGKDSAKNSCAQTRN*
Ga0137358_103232122	3300012582	Vadose Zone Soil	RICDGMSACELDGKVIYMHSGGGFGIFGVGVLFEEMDAEQRTAVEAWLRELAGPAGKDVGMNSEAQKQG*
Ga0137358_103346561	3300012582	Vadose Zone Soil	LHSGGGFGIFGMGVVFEEMGAEQQSAIEAWLRGLAGRAGKNSAKKLPLPD*
Ga0137358_108746281	3300012582	Vadose Zone Soil	LHGKVLYMHSGGGFGIFGMGVLFEEMGPEQHSAIDAWLRRLAGHPGKDLGKTSFSQIRG*
Ga0137358_109448311	3300012582	Vadose Zone Soil	RICDGMSACELDGKVIYMHSGGGFGIFGVGVLFEEMDAEQRSAVEAWLRELAGPAGKDVGMNSEAQKPG*
Ga0137358_110097442	3300012582	Vadose Zone Soil	GMGVLFEEMGAEQHSAIGAWLRKLAGRPGKDLGKNSFSQISG*
Ga0137395_101670322	3300012917	Vadose Zone Soil	SGKVIYMHSGGGFGIFGMGVVFEKMGAEQQSAIETWLCGLAGRPGKDSAKSSFSQTRS*
Ga0137395_108421152	3300012917	Vadose Zone Soil	FEEMGAEEHSAIGAWLRKLAGRSGNDSGENSFSQIRG*
Ga0137396_101219703	3300012918	Vadose Zone Soil	DGKVIYMHSGGGFGIFGVGVLFEEMDPEQRSAVEAWLRELARHPGKDAGMDSEAQKPG*
Ga0137396_110357751	3300012918	Vadose Zone Soil	LHGKVLYMHSGGGFGIFGMGVLFEEMGAEQQSVIGAWLRELAGRPGKDFGKNSFSQIRG*
Ga0137396_110410551	3300012918	Vadose Zone Soil	GKVLYMHSGGGFGIFGMGVLFEEMGPEQHSAIDAWLRKLAARPGKDLGKNTFSQIRD*
Ga0137394_107657293	3300012922	Vadose Zone Soil	FEEMGAEQHSAIGAWLRKLAGRPGKDSGKNSFSQIRG*
Ga0137359_100636563	3300012923	Vadose Zone Soil	HSGGGFGIFGMGVLFEEMGPEQHSTIHGWLNKLAGRPGKDLGKTSFSQIRG*
Ga0137359_107761691	3300012923	Vadose Zone Soil	TCELHGKVLYMHSGGGFGIFGMGVLFEEMGAEQHSAIDAWLRGLAGHPGKAVGKNSFS*
Ga0137359_112803401	3300012923	Vadose Zone Soil	ELHGKVLYLHSGGGFGIFGMGVVFEEMDADQQSAIEAWLRGLAGRPGKDSAKDSFSQSRI
Ga0137413_112555122	3300012924	Vadose Zone Soil	GTNTCELHGKVLYMHSGGGFGIFGMGVLFEEMGTEQHSAIDGWLRDLAVRQGKELGNNSFSQIRG*
Ga0137413_114253801	3300012924	Vadose Zone Soil	EMGTEQHSAIDGWLRDLAVRQGKELGNNSFSQISG*
Ga0137413_117821092	3300012924	Vadose Zone Soil	MHSGGGFGIFGMGVLFEEMSAEQHSAIDAWLRGLAGRPRKDSGKTSFSQNRR*
Ga0137419_100035226	3300012925	Vadose Zone Soil	MHSWGGFGIFGMGVLLEEMGAEQHSAIGAWLRELAGRPGKDLGKSSFSQIRG*
Ga0137419_100098379	3300012925	Vadose Zone Soil	GGGFGIFGMGVLFEEMGAEQHSTIDAWLCGLAGHRGKDLGKNSFSQIRS*
Ga0137419_102962611	3300012925	Vadose Zone Soil	MSTCELHGKVIYMHSGGGFGIFGMGVLFEEMGAEQHSAIGAWLRKLAGRPGKDLGKNSFSQIRG*
Ga0137419_108059161	3300012925	Vadose Zone Soil	GGFGIFGMGVLFEEMGAEQHSAIGAWLHKLAGPPGKDLKKNSFSQIRG*
Ga0137419_110762282	3300012925	Vadose Zone Soil	TCELPGKVIYMHSGGGFGIFGMGVLFGEMGPEQHSTIDAWLRRLGGRPGRDLGKNSFSQIRG*
Ga0137419_113243491	3300012925	Vadose Zone Soil	MHSGGGFGIFGMGVLFGEMSPEQQSTIDAWLRGLAGRPGGDLGKNSFSQIRG*
Ga0137416_104408202	3300012927	Vadose Zone Soil	CTELLLRIRDGMSTHELHGKVIYVQSGGGLGLFGMGVQFGEMGAEQRSVIDTWLRELAGHRGKALGKNSELQNSD*
Ga0137416_111075881	3300012927	Vadose Zone Soil	LYMHSGGGFGIFGMGVLFEEMGTEQHSAIDGWLRDLAVRQGKELGNNSFSQIRG*
Ga0137416_115108482	3300012927	Vadose Zone Soil	ELPGKVIYMHSGGGFGIFGMGVLFGEMGPEQQSTIDAWLRLLAGRPGRDLGKNSFSQIRG
Ga0137416_119205322	3300012927	Vadose Zone Soil	MSTCELPGKVIYMHSGGGFGIFGMGVLFGEMGPEQHSTIDAWLRRLGGRPGRDLGKNSFSQIRG*
Ga0137404_106527151	3300012929	Vadose Zone Soil	MHSGGGFGIFGMGVLFEEMEAEQKFAIDKWLRELAVRQGNDLRNNSFSQVK*
Ga0137404_112536271	3300012929	Vadose Zone Soil	HSGGGFGIFGMGVVFEEMGAEQQSAIEAWLRGLAGRAGKNSAKKLPLPD*
Ga0137407_101441761	3300012930	Vadose Zone Soil	HGKVLYMHSGGGFGIFGMGVLFEEMGPEQHSTIDAWLRKLSRRPGKDLGKTSSLKSGAKSR*
Ga0137407_120608401	3300012930	Vadose Zone Soil	GMGVLFEEMGAEQHSAIGAWLRKLAGRPGKDSGKNSFSQIRG*
Ga0137410_103030561	3300012944	Vadose Zone Soil	ELHGKVIYMHSGGGFGIFGMGVLFEEMGAEQQSAIGAWLRKLAGRPGKDLGKNSFSQIRG
Ga0137410_114015231	3300012944	Vadose Zone Soil	GKVLYMHSGGGFGIFGMGVLFEEMGAEQHSTINAWLSGLAGQSGNNLRKNSFSQIRD*
Ga0137410_117071391	3300012944	Vadose Zone Soil	HSGGGFGIFGMGVLFEEMGAEQHSAIGAWLRKLAGRPGKDLGKNSFSQIGS*
Ga0134078_100528001	3300014157	Grasslands Soil	YMHSGGGFGIFGMGVLFEEMDAEQRSAIEKWLRELAAQARKDLGNNPASRIRG*
Ga0134079_100958761	3300014166	Grasslands Soil	KVIYVHSGGGFGIFGMGVLFEEMDSEQRSAIDAWLRGLAAYPGEDSGKDSFSQIGLRPA*
Ga0137414_12057997	3300015051	Vadose Zone Soil	MHSGGGFGIFGMGVLFEEMGTAQHSAINAWLHELAGVMGKISGNNSLHSNRQRNRVTRN*
Ga0137405_12768492	3300015053	Vadose Zone Soil	GIFGMGVMFEEMGAEQHSVIGAWLHKLAVRPGKDLGKNSFSQIRG*
Ga0137420_13382461	3300015054	Vadose Zone Soil	GIFGMGVLFEEMGPEQHSAIDAWLRKLAGRPGKDLGKNSFSQIRD*
Ga0137418_102039994	3300015241	Vadose Zone Soil	PGKVIYMHSGGGFGIFGMGVLFGEMGPEQQSTIDAWLRRLAGRPGKDLGKNSFSQIRG*
Ga0137409_101333901	3300015245	Vadose Zone Soil	MSTCELQGRVLYMHSGGGFGVFGMGVLFEEMDAEQHSAIESWLRELAKQSKRELAKNSPAQLKG*
Ga0137403_100127531	3300015264	Vadose Zone Soil	KVLYMHSGGGFGIFGMGVLFEEMGPEQHSTIGAWLRKLAGRPGKDLGKNSLSQIRG*
Ga0137403_100980144	3300015264	Vadose Zone Soil	THELHGKVIYVQSGGGLGLFGMGVQFGEMGAEQRSVIDPWLRELAGHRGKVLGKNSELQNSD*
Ga0137403_103695611	3300015264	Vadose Zone Soil	GKVLYMHSGGGFGIFGMGVLFEEMGAEEHSAIDAWIRGLAGQPRKDSGKSPFSQIRG*
Ga0137403_109703112	3300015264	Vadose Zone Soil	SGGGFGIFGMGVVFEEMGAEQQSAIEAWLRGLAGRPGKDSAKNASPDVRG*
Ga0134083_101884342	3300017659	Grasslands Soil	FGMGVLFEEMGAEQHSSIDAWLRKLAGRPGKDLGKNSLSQIRG
Ga0066662_109050512	3300018468	Grasslands Soil	HSGGGFGIFGMGVLFEEMGAEQHSSIDAWLRKLAGRPGKDSGKNSYSQLRG
Ga0066669_107219391	3300018482	Grasslands Soil	VHGRVLYMHSGGGFGIFGMGVLFEEMEAEQKFAIDKWLRELAVRQGNDLRNNSFSQVK
Ga0066669_108955421	3300018482	Grasslands Soil	TNTCELPGRVIYMHSGGGLGIFGMGVLFGDMGAEQHSAIDAWLDRLAGQTGKNSGKHSFTQIRC
Ga0193755_11451082	3300020004	Soil	LLLRIRDGMSTHELHGKVIYVQSGGGLGLFGMGVQFGEMGAEQRSVIDTWLRELAGHRGKVLGKNSELQNSD
Ga0193721_10776751	3300020018	Soil	KVIYMHSGGGFGIFGVGVVFEEMDPEQRSAVEAWLRELARHPGKDAGMNSEAQKPG
Ga0179592_104415841	3300020199	Vadose Zone Soil	GGGFGVFGMGVLFEEMGPEQHSAIDAWLHGLARRPRKDSGQNSFSQIRG
Ga0179592_105050292	3300020199	Vadose Zone Soil	LFEEMGTEQHSAIDGWLRDLAVRQGKELGNNSFSQIRG
Ga0179592_105068952	3300020199	Vadose Zone Soil	GMGVLFEEMGAEEHSAIGAWLRKLAGLSGNGSGKNSFSRIRG
Ga0210404_100265165	3300021088	Soil	MHSGGGFGIFGMGVLFEEMGTEQHSAIDAWLRELAGRQGKDLGSNSLSQI
Ga0210400_112937381	3300021170	Soil	NTCELSGKVLYMHSGGGFGIFGMGVLFEEMGTEQHSAIDQWLRDLARHQGKELGTNFSTQNKA
Ga0210405_101160912	3300021171	Soil	MHSGGGFGIFGMGVLFEEMGTEQHSAIDAWLRELAGRQGKDLGSNSLFQIRG
Ga0179589_103072261	3300024288	Vadose Zone Soil	GMGVLFEEMGTEQHSAIDGWLRDLAVRQGKELGNNSFSQIRG
Ga0137417_10511232	3300024330	Vadose Zone Soil	HSGGGFGIFGMGVLFEEMSAEQHSTIDAWLRVLAGRAGKDLGKTFFSQCSHISG
Ga0209154_12587382	3300026317	Soil	ICDGMSTCELDGKVIYMHSGGGFGIFGVGVLFEEMDPEQRSAVEAWLRELARHPGKDAGMDSEAQKSG
Ga0209802_12851851	3300026328	Soil	VLFGDLGAEQHSAIDAWLHRLAGQTGKNSGKHSFTQIRG
Ga0209158_12380881	3300026333	Soil	GKVIYMHSGGGFGIFGMGVLFEEMDAEQRSAIEEWLRGLAEQARKDLGKDSLSPMRR
Ga0257163_10164071	3300026359	Soil	LHSGGGFGIFGMGVVFEEMGAEQRAAIEAWLRGLAGRPGKDSATNSSSQVRG
Ga0257158_11253251	3300026515	Soil	LYMHSGGGFGIFGMGVLFEEMGTEQHSAINAWLGELAGRQGKDSGNNSVSQIRG
Ga0209807_10088856	3300026530	Soil	TSTCELQGKVIYMHSGGGFGIFGMGVLFEEMDAEQRSAIEAWLRGLAAQAKKDLGDNTVSQIRG
Ga0209577_100449465	3300026552	Soil	RISDGTSTCELLGKVIYMHSGGGFGIFGMGVLFEEMDGEQRSAIEAWLRGLAAQAKKDLGDNTVSQIRG
Ga0179593_11124015	3300026555	Vadose Zone Soil	EMGAEQHSAIGAWLRKLAGRPGKDSRKNSFSQIRG
Ga0179587_107085701	3300026557	Vadose Zone Soil	SGGGFGIFGMGVLFEEMGAEQHSAIGAWLRKLAGRPGKDLGKNSFSQIRG
Ga0179587_109907061	3300026557	Vadose Zone Soil	ELHGKVLYMHSGGGFGIFGMGVLFEEMSAEQHSTIDAWLRVLAGRAGKDLGKTSFSQCSHISG
Ga0209076_10929211	3300027643	Vadose Zone Soil	SGGGFGIFGMGVLFEEMSAEQHSTIDAWLRVLAGRAGKDLGKTSFSQCSHISG
Ga0209076_11568721	3300027643	Vadose Zone Soil	IYMHSGGGFGIFGVGVLFEEMDAEQRSAVEAWLRELAGPAGKDVGMNSEAQKPG
Ga0209217_10047361	3300027651	Forest Soil	CELHGKILYLHSGGGFGIFGMGVVFEEMDADQQSAIEAWLRGLAGRPGKDSAKDSFSQSR
Ga0209180_101853671	3300027846	Vadose Zone Soil	GGFGIFGMGVVFEEMGAEQQSAIEAWLRGLAGRPGKDSANNPFPQPRS
Ga0209701_102425252	3300027862	Vadose Zone Soil	VLFEEMGAEQHSTIDAWLRELAGRPGRDLGKNSFSQIRG
Ga0209590_101983751	3300027882	Vadose Zone Soil	GGFGIFGMGVLFEEMGPEQHSTIHAWLDKLAGRPGKDLGKTPISQIRG
Ga0209590_107400262	3300027882	Vadose Zone Soil	STCELDGKVIYMHSGGGFGIFGVGVLFEEMDAEQRSAVEAWLRELAGHAGKDVGMNSEAQKPG
Ga0209488_103156372	3300027903	Vadose Zone Soil	FGMGVLFEEMGPEQHSTIGAWLHKLAGRPGKDLGKNSFSQIRG
Ga0209488_110875461	3300027903	Vadose Zone Soil	MHSGGGFGIFGMGVLFEEMEAEQKFAIDKWLRELAVRQGNDLRNNSFSQVK
Ga0209526_100054458	3300028047	Forest Soil	KVLYLHSGGGFGIFGMGVLFEEMGAEQHSAIDAWLSGLAGHPGKDLGRNSFPQIRA
Ga0209526_106970031	3300028047	Forest Soil	KVLYLHSGGGFGIFGMGVLFEEMGAEQHSAIDGWLSGLAGHPGKDLGRNSFPQIRA
Ga0307308_100800276	3300028884	Soil	DGMSTCELDGKVIYMHSGGGFGIFGVGVVFEEMDPEQRSAVEAWLRELARHPGKDAGMNSEAQKPG
Ga0222749_101398522	3300029636	Soil	GKVLYMHSGGGFGVFGMGVLFEEMGAEQHSAIDAWLRELAGRTGKGLRNNSFSQIRG
Ga0073994_100189861	3300030991	Soil	ICDGMSTCELNGKVIYMHSGGGFGIFGVGVLFEEMDAEQRSAVEAWLRELARHSGKDAAMDSEAQKPG
Ga0170834_1028197042	3300031057	Forest Soil	VLFEEMGAEQQSAIDAWLRGLAGHPGKNSEKAPFSQSRR
Ga0170824_1277040622	3300031231	Forest Soil	GGFGIFGMGVLFEEMGTELHSAINARLRELSLRHRKDSGNNSVSQVSD
Ga0170818_1075964402	3300031474	Forest Soil	ALYMHSGGGFGIFGMGVLFEEMGTELHSAINARLRELSLRHRKDSGNNSVSQVSD
Ga0170818_1153229933	3300031474	Forest Soil	YMHSGGGFGIFGMGVLFEEMGAEQHSAIDTWLSGLTKRPGRDSGKNPFSQIRS
Ga0307469_109570951	3300031720	Hardwood Forest Soil	GMGVLFEEMGTEQHSAIDGWLRELAVRQGKELGSGSFSQIRG
Ga0307469_122014782	3300031720	Hardwood Forest Soil	RVIYMHSGGGLGIFGMGVLFGDLGAEQHSAIDAWLHRLAGQTGKNSGKHSFTQIRG
Ga0307471_1024933081	3300032180	Hardwood Forest Soil	YVHSGGGFGIFGMGVLFEEMDAEQHSAIDAWLRGLAAYPGEDSGKNSFSQIRLRPA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F038169

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences