NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F038363

Metagenome Family F038363

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F038363
Family Type Metagenome
Number of Sequences 166
Average Sequence Length 84 residues
Representative Sequence RWVNDPANEKAAIELMVQRLKIDEAIAAQTYKFMIPENKAFRGEGVVDGAGLAEMIRLLAADNMIPERKPWETFVDPAFMPAGK
Number of Associated Samples 150
Number of Associated Scaffolds 166

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 1.20 %
% of genes near scaffold ends (potentially truncated) 95.78 %
% of genes from short scaffolds (< 2000 bps) 93.37 %
Associated GOLD sequencing projects 140
AlphaFold2 3D model prediction Yes
3D model pTM-score0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (99.398 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere
(6.627 % of family members)
Environment Ontology (ENVO) Unclassified
(31.325 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(42.771 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 40.18%    β-sheet: 0.00%    Coil/Unstructured: 59.82%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.46
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 166 Family Scaffolds
PF09084NMT1 24.70
PF00355Rieske 6.02
PF13343SBP_bac_6 2.41
PF07883Cupin_2 1.81
PF06808DctM 1.81
PF08402TOBE_2 1.81
PF03781FGE-sulfatase 1.81
PF03401TctC 1.20
PF03795YCII 1.20
PF00903Glyoxalase 1.20
PF00581Rhodanese 0.60
PF08388GIIM 0.60
PF12797Fer4_2 0.60
PF00300His_Phos_1 0.60

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 166 Family Scaffolds
COG0715ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic componentInorganic ion transport and metabolism [P] 24.70
COG4521ABC-type taurine transport system, periplasmic componentInorganic ion transport and metabolism [P] 24.70
COG1262Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domainPosttranslational modification, protein turnover, chaperones [O] 1.81
COG2350YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHisSecondary metabolites biosynthesis, transport and catabolism [Q] 1.20
COG3181Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctCEnergy production and conversion [C] 1.20


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms99.40 %
UnclassifiedrootN/A0.60 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2001200001|2001286490All Organisms → cellular organisms → Bacteria1151Open in IMG/M
3300000363|ICChiseqgaiiFebDRAFT_14291751All Organisms → cellular organisms → Bacteria1359Open in IMG/M
3300000787|JGI11643J11755_10750626All Organisms → cellular organisms → Bacteria511Open in IMG/M
3300000787|JGI11643J11755_11114191All Organisms → cellular organisms → Bacteria739Open in IMG/M
3300000789|JGI1027J11758_13040870All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium570Open in IMG/M
3300000837|AP72_2010_repI_A100DRAFT_1020258All Organisms → cellular organisms → Bacteria934Open in IMG/M
3300001431|F14TB_104059248All Organisms → cellular organisms → Bacteria659Open in IMG/M
3300003324|soilH2_10167016All Organisms → cellular organisms → Bacteria1578Open in IMG/M
3300003371|JGI26145J50221_1009576All Organisms → cellular organisms → Bacteria844Open in IMG/M
3300004022|Ga0055432_10236007All Organisms → cellular organisms → Bacteria535Open in IMG/M
3300004156|Ga0062589_100923423All Organisms → cellular organisms → Bacteria → FCB group → candidate division Zixibacteria → unclassified candidate division Zixibacteria → candidate division Zixibacteria bacterium SM1_73806Open in IMG/M
3300004268|Ga0066398_10214444All Organisms → cellular organisms → Bacteria514Open in IMG/M
3300004281|Ga0066397_10101088All Organisms → cellular organisms → Bacteria604Open in IMG/M
3300004463|Ga0063356_105467102All Organisms → cellular organisms → Bacteria545Open in IMG/M
3300004463|Ga0063356_105656410All Organisms → cellular organisms → Bacteria536Open in IMG/M
3300004643|Ga0062591_102234476All Organisms → cellular organisms → Bacteria570Open in IMG/M
3300005169|Ga0066810_10194351All Organisms → cellular organisms → Bacteria507Open in IMG/M
3300005183|Ga0068993_10076635All Organisms → cellular organisms → Bacteria1030Open in IMG/M
3300005186|Ga0066676_10230109All Organisms → cellular organisms → Bacteria1203Open in IMG/M
3300005294|Ga0065705_10943980All Organisms → cellular organisms → Bacteria563Open in IMG/M
3300005294|Ga0065705_10992205All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium549Open in IMG/M
3300005294|Ga0065705_11032287All Organisms → cellular organisms → Bacteria539Open in IMG/M
3300005295|Ga0065707_10421941All Organisms → cellular organisms → Bacteria829Open in IMG/M
3300005330|Ga0070690_101586122All Organisms → cellular organisms → Bacteria530Open in IMG/M
3300005330|Ga0070690_101743126All Organisms → cellular organisms → Bacteria507Open in IMG/M
3300005332|Ga0066388_104631265All Organisms → cellular organisms → Bacteria700Open in IMG/M
3300005332|Ga0066388_107819362All Organisms → cellular organisms → Bacteria535Open in IMG/M
3300005333|Ga0070677_10082295All Organisms → cellular organisms → Bacteria1380Open in IMG/M
3300005347|Ga0070668_100176796All Organisms → cellular organisms → Bacteria1741Open in IMG/M
3300005355|Ga0070671_100690308All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium885Open in IMG/M
3300005364|Ga0070673_100166532All Organisms → cellular organisms → Bacteria1878Open in IMG/M
3300005446|Ga0066686_10456430All Organisms → cellular organisms → Bacteria872Open in IMG/M
3300005457|Ga0070662_100576848All Organisms → cellular organisms → Bacteria944Open in IMG/M
3300005457|Ga0070662_101350027All Organisms → cellular organisms → Bacteria614Open in IMG/M
3300005457|Ga0070662_101455622All Organisms → cellular organisms → Bacteria590Open in IMG/M
3300005458|Ga0070681_11703721All Organisms → cellular organisms → Bacteria556Open in IMG/M
3300005467|Ga0070706_100946162All Organisms → cellular organisms → Bacteria795Open in IMG/M
3300005471|Ga0070698_101330259All Organisms → cellular organisms → Bacteria669Open in IMG/M
3300005535|Ga0070684_101740921All Organisms → cellular organisms → Bacteria588Open in IMG/M
3300005545|Ga0070695_100651313All Organisms → cellular organisms → Bacteria832Open in IMG/M
3300005546|Ga0070696_101230699All Organisms → cellular organisms → Bacteria633Open in IMG/M
3300005547|Ga0070693_100040934All Organisms → cellular organisms → Bacteria2604Open in IMG/M
3300005553|Ga0066695_10003235All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria7279Open in IMG/M
3300005558|Ga0066698_10822657All Organisms → cellular organisms → Bacteria → Proteobacteria600Open in IMG/M
3300005559|Ga0066700_10505615All Organisms → cellular organisms → Bacteria843Open in IMG/M
3300005564|Ga0070664_100745520All Organisms → cellular organisms → Bacteria914Open in IMG/M
3300005616|Ga0068852_100442566All Organisms → cellular organisms → Bacteria1285Open in IMG/M
3300005617|Ga0068859_100534437All Organisms → cellular organisms → Bacteria1267Open in IMG/M
3300005618|Ga0068864_101471110All Organisms → cellular organisms → Bacteria684Open in IMG/M
3300005713|Ga0066905_100131123All Organisms → cellular organisms → Bacteria → Proteobacteria1769Open in IMG/M
3300005713|Ga0066905_102035023All Organisms → cellular organisms → Bacteria533Open in IMG/M
3300005713|Ga0066905_102092408All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium526Open in IMG/M
3300005718|Ga0068866_10273293All Organisms → cellular organisms → Bacteria1044Open in IMG/M
3300005764|Ga0066903_102922337All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp. PH10926Open in IMG/M
3300005873|Ga0075287_1003736All Organisms → cellular organisms → Bacteria1833Open in IMG/M
3300005889|Ga0075290_1065799All Organisms → cellular organisms → Bacteria517Open in IMG/M
3300006032|Ga0066696_10275553All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes1090Open in IMG/M
3300006173|Ga0070716_101755402All Organisms → cellular organisms → Bacteria513Open in IMG/M
3300006175|Ga0070712_101850960All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp. PH10528Open in IMG/M
3300006806|Ga0079220_10024120All Organisms → cellular organisms → Bacteria2611Open in IMG/M
3300006845|Ga0075421_101638770All Organisms → cellular organisms → Bacteria698Open in IMG/M
3300006846|Ga0075430_100446120All Organisms → cellular organisms → Bacteria1068Open in IMG/M
3300006853|Ga0075420_101639034All Organisms → cellular organisms → Bacteria551Open in IMG/M
3300006854|Ga0075425_101711027All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → Methylobacillus → unclassified Methylobacillus → Methylobacillus sp. MM3707Open in IMG/M
3300006871|Ga0075434_100713880All Organisms → cellular organisms → Bacteria1020Open in IMG/M
3300006894|Ga0079215_11107698All Organisms → cellular organisms → Bacteria594Open in IMG/M
3300006904|Ga0075424_101367385All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → Methylobacillus → unclassified Methylobacillus → Methylobacillus sp. MM3752Open in IMG/M
3300006954|Ga0079219_10466785All Organisms → cellular organisms → Bacteria869Open in IMG/M
3300006969|Ga0075419_10350969All Organisms → cellular organisms → Bacteria1003Open in IMG/M
3300009137|Ga0066709_100414107All Organisms → cellular organisms → Bacteria1874Open in IMG/M
3300009147|Ga0114129_11887786All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium725Open in IMG/M
3300009156|Ga0111538_10158117All Organisms → cellular organisms → Bacteria2878Open in IMG/M
3300009162|Ga0075423_11875629All Organisms → cellular organisms → Bacteria647Open in IMG/M
3300009177|Ga0105248_13189261All Organisms → cellular organisms → Bacteria522Open in IMG/M
3300009609|Ga0105347_1422832All Organisms → cellular organisms → Bacteria575Open in IMG/M
3300009792|Ga0126374_11632384All Organisms → cellular organisms → Bacteria534Open in IMG/M
3300009837|Ga0105058_1037935All Organisms → cellular organisms → Bacteria1056Open in IMG/M
3300010046|Ga0126384_11482760All Organisms → cellular organisms → Bacteria635Open in IMG/M
3300010046|Ga0126384_11558101All Organisms → cellular organisms → Bacteria621Open in IMG/M
3300010046|Ga0126384_11702239All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium596Open in IMG/M
3300010326|Ga0134065_10501191All Organisms → cellular organisms → Bacteria506Open in IMG/M
3300010335|Ga0134063_10306331All Organisms → cellular organisms → Bacteria765Open in IMG/M
3300010358|Ga0126370_12247447All Organisms → cellular organisms → Bacteria539Open in IMG/M
3300010366|Ga0126379_10880768All Organisms → cellular organisms → Bacteria997Open in IMG/M
3300010375|Ga0105239_11031123All Organisms → cellular organisms → Bacteria946Open in IMG/M
3300010376|Ga0126381_105023474All Organisms → cellular organisms → Bacteria507Open in IMG/M
3300010400|Ga0134122_11997670All Organisms → cellular organisms → Bacteria618Open in IMG/M
3300011431|Ga0137438_1098496All Organisms → cellular organisms → Bacteria889Open in IMG/M
3300012174|Ga0137338_1059587All Organisms → cellular organisms → Bacteria814Open in IMG/M
3300012205|Ga0137362_10606775All Organisms → cellular organisms → Bacteria943Open in IMG/M
3300012211|Ga0137377_11293703All Organisms → cellular organisms → Bacteria659Open in IMG/M
3300012228|Ga0137459_1251063All Organisms → cellular organisms → Bacteria511Open in IMG/M
3300012360|Ga0137375_10073686All Organisms → cellular organisms → Bacteria3591Open in IMG/M
3300012483|Ga0157337_1032078All Organisms → cellular organisms → Bacteria543Open in IMG/M
3300012493|Ga0157355_1017795All Organisms → cellular organisms → Bacteria632Open in IMG/M
3300012511|Ga0157332_1005109All Organisms → cellular organisms → Bacteria1123Open in IMG/M
3300012913|Ga0157298_10276871All Organisms → cellular organisms → Bacteria582Open in IMG/M
3300012923|Ga0137359_10411731All Organisms → cellular organisms → Bacteria1198Open in IMG/M
3300012931|Ga0153915_10440305All Organisms → cellular organisms → Bacteria1481Open in IMG/M
3300012944|Ga0137410_10524625All Organisms → cellular organisms → Bacteria971Open in IMG/M
3300012948|Ga0126375_10912691All Organisms → cellular organisms → Bacteria707Open in IMG/M
3300012961|Ga0164302_10004899All Organisms → cellular organisms → Bacteria4782Open in IMG/M
3300012975|Ga0134110_10217519All Organisms → cellular organisms → Bacteria806Open in IMG/M
3300013102|Ga0157371_11266344All Organisms → cellular organisms → Bacteria570Open in IMG/M
3300013105|Ga0157369_12411744All Organisms → cellular organisms → Bacteria533Open in IMG/M
3300013308|Ga0157375_10514537All Organisms → cellular organisms → Bacteria1360Open in IMG/M
3300014318|Ga0075351_1137900All Organisms → cellular organisms → Bacteria567Open in IMG/M
3300014745|Ga0157377_10576341All Organisms → cellular organisms → Bacteria799Open in IMG/M
3300015356|Ga0134073_10024805All Organisms → cellular organisms → Bacteria1468Open in IMG/M
3300015358|Ga0134089_10403552All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium584Open in IMG/M
3300015371|Ga0132258_13419867All Organisms → cellular organisms → Bacteria1089Open in IMG/M
3300015372|Ga0132256_101101477All Organisms → cellular organisms → Bacteria909Open in IMG/M
3300015373|Ga0132257_100064213All Organisms → cellular organisms → Bacteria4132Open in IMG/M
3300015374|Ga0132255_102375937All Organisms → cellular organisms → Bacteria → FCB group → candidate division Zixibacteria → unclassified candidate division Zixibacteria → candidate division Zixibacteria bacterium SM1_73809Open in IMG/M
3300017927|Ga0187824_10051280All Organisms → cellular organisms → Bacteria1272Open in IMG/M
3300017944|Ga0187786_10365556Not Available615Open in IMG/M
3300018028|Ga0184608_10259138All Organisms → cellular organisms → Bacteria765Open in IMG/M
3300018031|Ga0184634_10457466All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium575Open in IMG/M
3300018053|Ga0184626_10257724All Organisms → cellular organisms → Bacteria731Open in IMG/M
3300018066|Ga0184617_1126476All Organisms → cellular organisms → Bacteria734Open in IMG/M
3300018074|Ga0184640_10329723All Organisms → cellular organisms → Bacteria692Open in IMG/M
3300018075|Ga0184632_10111674All Organisms → cellular organisms → Bacteria1201Open in IMG/M
3300018078|Ga0184612_10109598All Organisms → cellular organisms → Bacteria1446Open in IMG/M
3300018079|Ga0184627_10142794All Organisms → cellular organisms → Bacteria1269Open in IMG/M
3300018081|Ga0184625_10044402All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2214Open in IMG/M
3300018081|Ga0184625_10057112All Organisms → cellular organisms → Bacteria → Proteobacteria1963Open in IMG/M
3300018422|Ga0190265_10851400All Organisms → cellular organisms → Bacteria1034Open in IMG/M
3300018422|Ga0190265_12111736All Organisms → cellular organisms → Bacteria667Open in IMG/M
3300019362|Ga0173479_10218135All Organisms → cellular organisms → Bacteria817Open in IMG/M
3300019377|Ga0190264_10235927All Organisms → cellular organisms → Bacteria1046Open in IMG/M
3300019878|Ga0193715_1016359All Organisms → cellular organisms → Bacteria1605Open in IMG/M
3300020583|Ga0210401_11367639All Organisms → cellular organisms → Bacteria566Open in IMG/M
3300021080|Ga0210382_10331169All Organisms → cellular organisms → Bacteria671Open in IMG/M
3300021090|Ga0210377_10232478All Organisms → cellular organisms → Bacteria1159Open in IMG/M
3300021432|Ga0210384_10902754All Organisms → cellular organisms → Bacteria784Open in IMG/M
3300025580|Ga0210138_1014466All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1598Open in IMG/M
3300025795|Ga0210114_1027714All Organisms → cellular organisms → Bacteria1198Open in IMG/M
3300025900|Ga0207710_10652153All Organisms → cellular organisms → Bacteria551Open in IMG/M
3300025931|Ga0207644_10605047All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium910Open in IMG/M
3300025931|Ga0207644_10865417All Organisms → cellular organisms → Bacteria757Open in IMG/M
3300025934|Ga0207686_10088008All Organisms → cellular organisms → Bacteria2044Open in IMG/M
3300025941|Ga0207711_12053651All Organisms → cellular organisms → Bacteria514Open in IMG/M
3300025960|Ga0207651_10199737All Organisms → cellular organisms → Bacteria1601Open in IMG/M
3300025972|Ga0207668_12005126All Organisms → cellular organisms → Bacteria521Open in IMG/M
3300026025|Ga0208778_1010329All Organisms → cellular organisms → Bacteria877Open in IMG/M
3300026025|Ga0208778_1016185All Organisms → cellular organisms → Bacteria719Open in IMG/M
3300026088|Ga0207641_10563258All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1112Open in IMG/M
3300026320|Ga0209131_1273181All Organisms → cellular organisms → Bacteria647Open in IMG/M
3300026537|Ga0209157_1288192All Organisms → cellular organisms → Bacteria608Open in IMG/M
3300027818|Ga0209706_10520901All Organisms → cellular organisms → Bacteria541Open in IMG/M
3300027876|Ga0209974_10058376All Organisms → cellular organisms → Bacteria1304Open in IMG/M
3300027909|Ga0209382_10337292All Organisms → cellular organisms → Bacteria1692Open in IMG/M
3300028828|Ga0307312_10844462All Organisms → cellular organisms → Bacteria607Open in IMG/M
(restricted) 3300031150|Ga0255311_1086523All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium673Open in IMG/M
(restricted) 3300031248|Ga0255312_1009757All Organisms → cellular organisms → Bacteria2283Open in IMG/M
3300031854|Ga0310904_11027612All Organisms → cellular organisms → Bacteria588Open in IMG/M
3300031901|Ga0307406_11191509All Organisms → cellular organisms → Bacteria661Open in IMG/M
3300031943|Ga0310885_10215602All Organisms → cellular organisms → Bacteria956Open in IMG/M
3300032180|Ga0307471_100890097All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1057Open in IMG/M
3300032211|Ga0310896_10309521All Organisms → cellular organisms → Bacteria819Open in IMG/M
3300032261|Ga0306920_101194627All Organisms → cellular organisms → Bacteria → Proteobacteria1099Open in IMG/M
3300032892|Ga0335081_10691467All Organisms → cellular organisms → Bacteria1239Open in IMG/M
3300033233|Ga0334722_10829210All Organisms → cellular organisms → Bacteria654Open in IMG/M
3300033480|Ga0316620_10097397All Organisms → cellular organisms → Bacteria2214Open in IMG/M
3300033513|Ga0316628_100552341All Organisms → cellular organisms → Bacteria1494Open in IMG/M
3300034149|Ga0364929_0160132All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium733Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil6.63%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere6.63%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment6.02%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil5.42%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil4.82%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil4.82%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.22%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere4.22%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil3.01%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil3.01%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands2.41%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil2.41%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere2.41%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil2.41%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere2.41%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere2.41%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.81%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil1.81%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.81%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.81%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.81%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.81%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment1.20%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.20%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.20%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.20%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.20%
Sandy SoilEnvironmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil1.20%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.20%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.20%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment0.60%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment0.60%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands0.60%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment0.60%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.60%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.60%
Unplanted SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil0.60%
Sugarcane Root And Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil0.60%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.60%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.60%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.60%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands0.60%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.60%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.60%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand0.60%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment0.60%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.60%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.60%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere0.60%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.60%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.60%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.60%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.60%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.60%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
2001200001Soil microbial communities from Waseca County, Minnesota, USA - Sample 10150EnvironmentalOpen in IMG/M
3300000363Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000787Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000789Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000837Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A100EnvironmentalOpen in IMG/M
3300001431Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemlyEnvironmentalOpen in IMG/M
3300003324Sugarcane bulk soil Sample H2EnvironmentalOpen in IMG/M
3300003371Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PMHost-AssociatedOpen in IMG/M
3300004022Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D1EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004268Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBioEnvironmentalOpen in IMG/M
3300004281Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBioEnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005169Soil and rhizosphere microbial communities from Laval, Canada - mgHPAEnvironmentalOpen in IMG/M
3300005183Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D1EnvironmentalOpen in IMG/M
3300005186Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125EnvironmentalOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005295Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3EnvironmentalOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005333Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaGHost-AssociatedOpen in IMG/M
3300005347Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaGHost-AssociatedOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005457Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaGHost-AssociatedOpen in IMG/M
3300005458Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaGEnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005535Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaGEnvironmentalOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005546Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaGEnvironmentalOpen in IMG/M
3300005547Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaGEnvironmentalOpen in IMG/M
3300005553Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144EnvironmentalOpen in IMG/M
3300005558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147EnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005616Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2Host-AssociatedOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005718Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005873Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_301EnvironmentalOpen in IMG/M
3300005889Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_201EnvironmentalOpen in IMG/M
3300006032Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145EnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006846Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4Host-AssociatedOpen in IMG/M
3300006853Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006894Agricultural soil microbial communities from Utah to study Nitrogen management - NC ControlEnvironmentalOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300006969Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3Host-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009609Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890EnvironmentalOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300009837Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010326Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300011431Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT157_2EnvironmentalOpen in IMG/M
3300012174Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT366_2EnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012228Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT700_2EnvironmentalOpen in IMG/M
3300012360Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaGEnvironmentalOpen in IMG/M
3300012483Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.4.yng.040610Host-AssociatedOpen in IMG/M
3300012493Unplanted soil (control) microbial communities from North Carolina - M.Soil.10.yng.090610EnvironmentalOpen in IMG/M
3300012511Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.080610_10EnvironmentalOpen in IMG/M
3300012913Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2EnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012931Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaGEnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300012975Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015EnvironmentalOpen in IMG/M
3300013102Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaGHost-AssociatedOpen in IMG/M
3300013105Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014318Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D1_rdEnvironmentalOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300015356Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300015358Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300017927Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4EnvironmentalOpen in IMG/M
3300017944Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MGEnvironmentalOpen in IMG/M
3300018028Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coexEnvironmentalOpen in IMG/M
3300018031Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1EnvironmentalOpen in IMG/M
3300018053Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1EnvironmentalOpen in IMG/M
3300018066Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1EnvironmentalOpen in IMG/M
3300018074Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2EnvironmentalOpen in IMG/M
3300018075Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1EnvironmentalOpen in IMG/M
3300018078Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coexEnvironmentalOpen in IMG/M
3300018079Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1EnvironmentalOpen in IMG/M
3300018081Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1EnvironmentalOpen in IMG/M
3300018422Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 TEnvironmentalOpen in IMG/M
3300019362Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)EnvironmentalOpen in IMG/M
3300019377Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 TEnvironmentalOpen in IMG/M
3300019878Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m2EnvironmentalOpen in IMG/M
3300020583Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-MEnvironmentalOpen in IMG/M
3300021080Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redoEnvironmentalOpen in IMG/M
3300021090Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_b1 redoEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300025580Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300025795Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025900Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025934Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025941Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025960Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026025Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_103 (SPAdes)EnvironmentalOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026537Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)EnvironmentalOpen in IMG/M
3300027818Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027876Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)Host-AssociatedOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300028828Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202EnvironmentalOpen in IMG/M
3300031150 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH4_T0_E4EnvironmentalOpen in IMG/M
3300031248 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH5_T0_E5EnvironmentalOpen in IMG/M
3300031854Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1EnvironmentalOpen in IMG/M
3300031901Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2Host-AssociatedOpen in IMG/M
3300031943Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032211Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300032892Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5EnvironmentalOpen in IMG/M
3300033233Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_bottomEnvironmentalOpen in IMG/M
3300033480Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_BEnvironmentalOpen in IMG/M
3300033513Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_CEnvironmentalOpen in IMG/M
3300034149Sediment microbial communities from East River floodplain, Colorado, United States - 20_j17EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
20013359172001200001SoilLKIDKTIAAQTYKFMIPENKAFQHEGIIDGPGLAEMIRLLESDKMIPRREPWEAFVDPAFLPQAK
ICChiseqgaiiFebDRAFT_1429175113300000363SoilAQNRPLFTRYMRAIGQGMRWINDPANEKAAIELMVQRLKIDQAIAAKTYKFMIPENKAFRYEGMIDGAGLAEMIRLLESDKMIPKREPWEMFVDPAFMPPAK*
JGI11643J11755_1075062623300000787SoilRFMRAMGQAMHWLNDPANEKGVIEVMMQRLKIDEATAERTYKFMVPENKAFRGEGAIDVAGLIEMIRLLAADQMIPKREPWETFVDPSFPTIK*
JGI11643J11755_1111419113300000787SoilRAIGQGMRWINDPANEKAAIELMVQRLKIDQAIAAKTYKFMIPENKAFRYEGMIDGAGLAEMIRLLESDKMIPKREPWEMFVDPAFMPPAK*
JGI1027J11758_1304087023300000789SoilEVMMQRLKIDEATAERTYKXMVPXNXAFRGEGAIDVAGLIEMIRLLAADQMIPKREPWETFVDPSFPTIK*
AP72_2010_repI_A100DRAFT_102025823300000837Forest SoilMRAMGQAMHWVNDPANEKAVIEMLVQRLKIDEATAARSYKFIILENKAFRGEGAIDGPGLAEMIRLLAGDQLISKREPWESFVDASFLSVTK*
F14TB_10405924833300001431SoilNKSLSQNRPLFARFMRALGQAMRWINDPANEKAAIEVVAQRLKLDDSTSARTYKFMVAENNAFRGLGTIDPPGLTEMIRLLASDNLISKREPWETFVDSAFLPATAK*
soilH2_1016701633300003324Sugarcane Root And Bulk SoilVNDPANEKAAVELLIQKLKVDSAIAEQTYKFMIPENRAFRGEGAVDGPGLAEMIRLLAADNMIPERKPWESFVDPAFLPAK*
JGI26145J50221_100957623300003371Arabidopsis Thaliana RhizosphereMRYMRAIGQGMRWINDPANEKAAIELMVQRLKIDQAIAAKTYKFMIPENKAFRYEGMIDGAGLAEMIRLLESDKMIPKREPWEMFVDPAFMPPAK*
Ga0055432_1023600723300004022Natural And Restored WetlandsMNDPANEKPMVELMTKNLKIDETLAAQTYKFMIPDNKSFRLEGAIDGPGMAEMVRLLFEDKMIPEKKPWESFVDSAFLPAK*
Ga0062589_10092342323300004156SoilAIELMVQRLKIDEAIAAQTYKFMIPENKAFRGEGVVDGAGLAEMIRLLAADNMIPERKPWETFVDPAFMPAGK*
Ga0066398_1021444413300004268Tropical Forest SoilRFMRAMGQAMHWVNDPANEKAVIEMLVQRLKIDEATAARSYKFIILENKAFRGAGAIDGPGLAEMIRLLAGDQLIPKREPWESFVDPSFLSAPK*
Ga0066397_1010108823300004281Tropical Forest SoilANEKAVIEMLVQRLEIDEATAARSYKFIILENKAFRGAGAIDGPGLAEMIRLLAGDQLIPKREPWESFVDPSFLSAPK*
Ga0063356_10546710213300004463Arabidopsis Thaliana RhizosphereEGLAAQTYKFMVPDNKSFRLEGVVDGPGMAEMVRLLFDDKMIPEKKPWETFVDAAFLAGSK*
Ga0063356_10565641013300004463Arabidopsis Thaliana RhizosphereLMVQRLKVDQGIAAQTYKFMIPENRAFQHEGVVDGAGLAEMIRLLEGDKMIPKREPWETFVDPAFLPVGK*
Ga0062591_10223447613300004643SoilFAQTKSLAQNRPLLTRFIRAIGQAMRWINDPANEKPMVELMTKNLKVDEALAAQTYKFMIPDNKSFRLEGVVDGPGMAEMVRLLFEDKMIPEKKPWESFVDPAFLPGNK*
Ga0066810_1019435113300005169SoilMGQAMRWLNDPANEKAVIEVMMQRLKIDEATAERTYKFMVPENKAFRGEGAIDVAGLIEMIRLLAADQMIPKREPWETFVDPSFPTIK*
Ga0068993_1007663513300005183Natural And Restored WetlandsQAMRWMNDPANEKPMVELMTKNLKIDETLAAQTYKFMIPDNKSFRLEGAIDGPGMAEMVRLLFEDKMIPEKKPWESFVDSAFLPAK*
Ga0066676_1023010913300005186SoilMGQAMHWINDPANEKAVTEIVAQRLKVDESTAARTYKFMVPENNAFRNEAAVDGPGLAEMIRLLASDNMIPKREPWETFVDPAFMPAAK*
Ga0065705_1094398013300005294Switchgrass RhizosphereAMGQAMRWLNDPANEKAVIEVMMQRLKIDEATAERTYKFMVPENKAFRGEGAIDVAGLTEMIRLLTADQMIPKREPWETFVDPSFPTIK*
Ga0065705_1099220513300005294Switchgrass RhizosphereQRLKIDEATAERTYKFMVPENKAFGGEGAIDVAGLTEMIRLLAADQMIPKREPWEAYVDPSFPTIK*
Ga0065705_1103228723300005294Switchgrass RhizosphereQGMRWLNDPANEKAAIELMVQRLKVDQAIAAQTYKFMIPENKAFQYEGIVDGQGLAEMIRLLESDKMIPKREPWETFVDPGFIAQGK*
Ga0065707_1042194113300005295Switchgrass RhizosphereDPANEKAAIELMVQRLKVDPAIAAQTYQFMIPENKAFRGEGLVDGAGLAEMIRLLAADNMIPERKPWESFVDPAFMPAGK*
Ga0070690_10158612213300005330Switchgrass RhizosphereASQKSLAQSRPLLTRFMRAIGQAMHWVNDPANEKAAIELMTQALKIDATMAAQTFKFMVADNKSFRLEGANDPVGMTEMIRLLFEDKMIPEKKPWESFVDPAFLPTNK*
Ga0070690_10174312613300005330Switchgrass RhizosphereAIGQGMHWVNDPANEKAAIELMVQRLKIDEAIAAQTYKFMIPENKAFRGEGVVDGAGLAEMIRLLAADNMIPERKPWETFVDPAFMPAGK*
Ga0066388_10463126523300005332Tropical Forest SoilQNRPLLLRFMRAMGQAMHWMNDPANEKGVIEVLVQHLKIDEATATRTYKFMIPENKAFRGEGAIDGPGLVEMVRLLAGDQLIPKREPWEVFVDASFLPGTR*
Ga0066388_10781936213300005332Tropical Forest SoilQGMRWVNDPANEKAAIELMVQRLKIDEAIAAQTYKFMIPENKAFRGEGLVDGAGLAEMIRLLAADNMISERKPWETFVDPAFMPAAK*
Ga0070677_1008229523300005333Miscanthus RhizosphereELMVQRLKVDPAIAAQTYQFMIPENKAFRGEGLVDGAGLAEMIRLLAADNMIQERKPWESFVDPAFMPAGK*
Ga0070668_10017679613300005347Switchgrass RhizosphereQLFTRYIRAIGHAQRWLNDPANEKPAIELMVQRLKVDGNIAAQTYKFIVQDNKNFRYEASIDGPGLAEMIRLLEYDKLIPKREPWEMFVDPAFISQAK*
Ga0070671_10069030813300005355Switchgrass RhizosphereAQSRPLLTRFMRAIGQAMHWVNDPANEKAAIELMTQALKIDATMAAQTFKFMVADNKSFRLEGANDPVGMTEMIRLLFEDKMIPEKKPWESFVDPAFLPTNK*
Ga0070673_10016653233300005364Switchgrass RhizosphereLAQNRQLFTRFIRAIGQGMRWVNDPANEKAAIELMVQRLKVDPAIAAQTYQFMIPENKAFRGEGLVDGAGLAEMIRLLAADNMIPERKPWESFVDPAFMPAGK*
Ga0066686_1045643013300005446SoilEVLVQRLKIDEATAARTYKFMVPENKAFRGEGAIDTAGLAEMIRLLASDQMIPKREPWESFVDGSFPTIK*
Ga0070662_10057684823300005457Corn RhizosphereANEKAAIELMVQRLKVDPAIAAQTYQFMIPENKAFRGEGLVDGAGLAEMIRLLAADNMIPERKPWESFVDPAFMPAGK*
Ga0070662_10135002713300005457Corn RhizosphereYASFFALNKSLQQNRQLFTRYIRAIGHAQRWLNDPANEKPAIELMVQRLKVDGNIAAQTYKFIVQDNKNFRYEASIDGPGLAEMIRLLEYDKLIPKREPWEMFVDPAFISQAK*
Ga0070662_10145562213300005457Corn RhizospherePANEKAAIELMVQRLKVDPAIAAQTYQFMIPENKAFRGEGIVDGAGLAEMIRLLAADNMIPERKPWETFVDPAFMPAGK*
Ga0070681_1170372123300005458Corn RhizosphereELMVQRLKVDPAIAAQTYQFMIPENKAFRGEGLVDGAGLAEMIRLLAADNMIPERKPWESFVDPAFMPAGK*
Ga0070706_10094616213300005467Corn, Switchgrass And Miscanthus RhizosphereVETMMQRLKIDEATATRTYKFMVPENKSFRGEGAIDGPGLAEMIRLLASDQLISKREPWDSFVDPSFLTPAK*
Ga0070698_10133025913300005471Corn, Switchgrass And Miscanthus RhizosphereQAMHWMNDPANEKVVTEILVQRLKLDEPTAARTYKFMIPENKAFRGEGAIDGPGVAEMIRLLAGDQMIPKREPWESFVDASFLSVTK*
Ga0070684_10174092113300005535Corn RhizosphereKSLAQNRPLFMRFVRAIGQGMHWVNDPANEKAAIELMVQRLKIDEAIAAQTYKFMIPENKAFRGEAVVDGAGLAEMIRLLAADNMIPERKPWESFVDPAFMPGGK*
Ga0070695_10065131323300005545Corn, Switchgrass And Miscanthus RhizosphereDEAIAAQTYKFMIPDNKAFRGEGVIDAAGLTEMIRLLAVDNMIPERKPWETFVDPAFMPAAK*
Ga0070696_10123069913300005546Corn, Switchgrass And Miscanthus RhizosphereEVLVQRLKIDEALAGRTYKFMITDNKAFRGEGIIDAAGVSEMIRLLAADQMIPKREPLELFVDAGFAPAPK*
Ga0070693_10004093433300005547Corn, Switchgrass And Miscanthus RhizosphereLFTRFIRAIGQGMRWVNDPANEKAAIELMVQRLKVDPAIAAQTYQFMIPENKAFRGEGLVDGAGLAEMIRLLAADNMIQERKPWESFVDPAFMPAGK*
Ga0066695_1000323513300005553SoilAMGQAMRWINDPANEKAVTEVLVQRLKIDEATAARTYKFMVPENKAFRGEGAIDTAGLAEMIRLLASDQMIPKREPWESFVDGSFPTIK*
Ga0066698_1082265723300005558SoilGQAMHWLNDPANEKAVVEVMMQRLKIDEATAERTYKFMVPENKAFRGEGAIDVAGLTEMIRLLAADQMIPKREPWETFVDPSFPSIK*
Ga0066700_1050561513300005559SoilMRWLNDPANEKATVETMMQRLKIDEATATRTYKFMVPENKSFRGEGAIDGPGLAEMIRLLASDQLISKREPWESFVDPSFLTPAK*
Ga0070664_10074552033300005564Corn RhizosphereVQRLKIDEALAGRTYKFMITDNKAFRGEGTIDTAGVSEMIRLLAGDQMIPKREPLELFVDPGFAPAPK*
Ga0068852_10044256623300005616Corn RhizosphereAIGQGMHWVNDPANEKAAIELMVQRLKIDEAIAAQTYKFMIPENKAFRGEGVVDGAGLAEMIRLLAADNMIPERKPWESFVDPAFMPGGK*
Ga0068859_10053443723300005617Switchgrass RhizospherePLLTRFMRAIGQAMHWVNDPANEKAAIELMTQALKIDATMAAQTFKFMVADNKSFRLEGANDPVGMTEMIRLLFEDKMIPEKKPWESFVDPAFLPTNK*
Ga0068864_10147111023300005618Switchgrass RhizosphereANEKAAIELLVQKLKVDEAIAAQTYKFMIPDNKAFRGEGIIDGPGLAEMIRLLAADNMIPERRPWESFVDPAFLPTAK*
Ga0066905_10013112313300005713Tropical Forest SoilRLKIDEATAERTYKFMVPENKAFRGEGAIDVAGLTEMIRLLAADQMIPKREPWEIFVDPSFPTIK*
Ga0066905_10203502313300005713Tropical Forest SoilAMGQAMHWVNDPANEKAVIEMLVQRLKIDEATAARSYKFIILENKAFRGEGAIDGPGLAEMIRLLAGDQLISKREPWESFVDASFLSVTK*
Ga0066905_10209240823300005713Tropical Forest SoilKGVTEVMMQRLKIDEVTAERTYKFMVSENKAFRGEGAIDVAGLTEMIRLLAADQMIPKREPWETFVDPSFPTIK*
Ga0068866_1027329323300005718Miscanthus RhizosphereQGMRWVNDPANEKAAIELMVQRLKVDPAIAAQTYQFMIPENKAFRGEGLVDGAGLAEMIRLLAADNMIQERKPWESFVDPAFMPAGK*
Ga0066903_10292233713300005764Tropical Forest SoilRFMRAMGQAMHWVNDPANEKAVIEMLVQRLKIDEATAARSYKFIILENKAFRGEGAIDGPGLAEMIRLLAGDQLISKREPWESFVDASFLSVTK*
Ga0075287_100373633300005873Rice Paddy SoilNEKAAVELMVQRLKIDQAIATQTYKFMIPENKAFRYEGIVDGPGLAEMIRLLESDKMIPRREPWETFVDAAFMPAK*
Ga0075290_106579923300005889Rice Paddy SoilPANEKAAIELMVQRLKVDQAIATQTYKFMIPENKAFRYEGIVDGPGLAEMIRLLESDKMIPRREPWETFVDAAFMPAK*
Ga0066696_1027555313300006032SoilAVTEVLVQRLKIDEATAARTYKFMVPENKAFRGEGAIDTAGLAEMIRLLASDQMIPKREPWESFVDGSFPTIK*
Ga0070716_10175540223300006173Corn, Switchgrass And Miscanthus RhizosphereFVRYMRAISQGMRWLNDPANEKAAIELMVQRLKVDQAIAVQTYKFMIPENKAFAHEGSIDGAGLAEMIRLLESDKMIAKREPWEMFVDPAFISQAK*
Ga0070712_10185096013300006175Corn, Switchgrass And Miscanthus RhizosphereLFMRFVRAIGQGMHWVNDPANEKAAIELMVQRLKIDEAIAAQTYKFMIPENKAFRGEGVVDGAGLAEMIRLLAADNMIPERKPWETFVDPAFMPAGK*
Ga0079220_1002412013300006806Agricultural SoilAIELMVQRLKVDPAIAAQTYQFMIPENKAFRGEGLVDGAGLAEMIRLLAADNMIPERKPWETFVDPAFMPAGK*
Ga0075421_10163877023300006845Populus RhizosphereEKAAIELMVQRLKIDESIASQTYRFMIPENKAFRGEAVIDGPGLAEMIRLLAADNMIPERKPWESFVDPAFMPPGK*
Ga0075430_10044612023300006846Populus RhizosphereNEKPAIELMVQRLKVDANIAAQTYKFIVQDNKSFRYEASIDGPGLAEMIRLLEYDKLIPKREPWEMFVDPAFISPAK*
Ga0075420_10163903423300006853Populus RhizosphereNDPANEKAAIELMVQRLKIDEGIAAQTYRFMIPENKAFRGEGIVDGAGLAEMIRLLAADNMIPERKPWETFVDPAFMPTAK*
Ga0075425_10171102723300006854Populus RhizosphereAIGQGMHWVNDPANERAAIELMIQKLKVDEGIAAQTYKFMIPDNKAFRGEGAVDGPGLAEMIRLLAADNMIPERKPWESFVDPAFLPAAK*
Ga0075434_10071388023300006871Populus RhizosphereLNDPANEKAAIELMVQRLKVDQVIAVQTYKFMIPENKAFAHEGSIDGAGLAEMIRLLESDKMIAKREPWEMFVDPAFISQAK*
Ga0079215_1110769813300006894Agricultural SoilNRQLFTRYMRAIGQAQRWLNDPGNEKAAIELMVQRLKVDAGIAAQTYKFIVQDNKSFRYEAAIDGPGLAEMIRLLEYDKLIPKREPWESFVDPAFIAATK*
Ga0075424_10136738513300006904Populus RhizosphereGMHWVNDPANERAAIELMIQKLKVDEGIAAQTYKFMIPDNKAFRGEGAVDGPGLAEMIRLLAADNMIPERKPWESFVDPAFLPAAK*
Ga0079219_1046678513300006954Agricultural SoilQRLKIDEAIAAQTYKFMIPENKAFRGEGAVDGAGLAEMIRLLAADNMIPERKPWESFVDPAFMPAGK*
Ga0075419_1035096913300006969Populus RhizosphereTTKSLAQNRPLFTRYMRAIGQGMRWLNDPANEKAAIELMVQRLKVDQAIAAQTYKFMIPENKAFQHEGTIDGPGIAEMIRLLESDKMIPKREPWESFVDPAFISQAK*
Ga0066709_10041410713300009137Grasslands SoilANEKAVTEIVAQRLKVDESTAARTYKFMVPENNAFRNEAAVDGPGLAEMIRLLASDNMIPKREPWETFVDPAFMPAAK*
Ga0114129_1188778623300009147Populus RhizosphereELMTKNLKIDETLAMQTYKFMIPDNKSFRFEGTIDGPGLAEMVRLLFEDKMISKREPWESFVDPAFLPAK*
Ga0111538_1015811743300009156Populus RhizosphereRWVNDPANEKAAIELMVQRLKIDEAIAAQTYKFMIPENKAFRGEGVVDGAGLAEMIRLLAADNMIPERKPWETFVDPAFMPAGK*
Ga0075423_1187562923300009162Populus RhizosphereVELMIQRLKIDEAIAAQTYKFLITENRAFRGEGVVDGPGLAEMIRLVYGDNLIPERKPWETFVDSAFLPTVK*
Ga0105248_1318926113300009177Switchgrass RhizosphereVNDPTNEKAAIELMVQRLKVDPAIAAQTYQFMIPENKAFRGEGLVDGAGLAEMIRLLAADNMIPERKPWESFVDPAFMPAGK*
Ga0105347_142283223300009609SoilEKAVTEVMMQRLKIDDVIAARTYKFMVAENQAFRGAGAIDAAGLTEMIRLLASDQLIPKREPWETFVDPSFPTLK*
Ga0126374_1163238423300009792Tropical Forest SoilEKAVIEMLVQRLKIDEATAARSYKFIILENKAFRGEGAIDGPGLAEMIRLLAGDQLIPKREPWESFVDPSFLSAPK*
Ga0105058_103793513300009837Groundwater SandVTEVVAQRLKLDESIAARTYKFMVPENKAFRNEAAVDGPGLAEMIRLLASDNMIPERKPWETFVDPAFLPTTK*
Ga0126384_1148276023300010046Tropical Forest SoilNDPANEKAVIEMLVQRLKIDEATAARSYKFIILENKAFRGEGAIDGPGLAEMIRLLAGDQLISKREPWESFVDASFLSVTK*
Ga0126384_1155810123300010046Tropical Forest SoilNDPANEKAVIEMLVQRLKIDEATAARSYKFIILENKAFRGAGAIDGPGLAEMIRLLAGDQLIPKREPWESFVDPSFLSAPK*
Ga0126384_1170223913300010046Tropical Forest SoilPANEKAAIEVMMQRLKIDEATAERTYKFMVPENKAFRGEGAIDVAGLTEMIRLLAADQMIPKREPWETFVDPSFPTIK*
Ga0134065_1050119123300010326Grasslands SoilRLKIDEATAARTYKFMVPENKAFRGEGAIDTAGLTEMIRLLASDQMIPKREPWESFVDGSFPTIK*
Ga0134063_1030633123300010335Grasslands SoilDPANEKAVTEVLVQRLKIDEATAARTYKFMVPENKAFRGEGAIDTAGLAEMIRLLASDQMIPKREPWESFVDGSFPTIK*
Ga0126370_1224744723300010358Tropical Forest SoilWVNDPANEKAVIEMLVQRLKIDEATAARSYKFIILENKAFRGEGAIDGPGLAEMIRLLAGDQLISKREPWESFVDASFLSVTK*
Ga0126379_1088076813300010366Tropical Forest SoilAIELMIQRLKIDEAIAAQTYKFMIPENNAFRGEGAVDGPGLAEMIRLLVADNMIPERKPWETFVDPAFMPAAK*
Ga0105239_1103112323300010375Corn RhizosphereRLKVDPAIAAQTYQFMIPENKAFRGEGIVDGAGLAEMIRLLAADNMIPERKPWESFVDPAFMPGGK*
Ga0126381_10502347413300010376Tropical Forest SoilPANEKAVIEMLVQRLKIDEATAARSYKFIILENKAFRGEGAIDGPGLAEMIRLLAGDQLISKREPWESFVDASFLSVTK*
Ga0134122_1199767013300010400Terrestrial SoilGMRWLNDPANEKAAIELMVQRLKVDQAIAAQTYKFMIPENKAFQYEGMVDGQGLAEMIRLLESDKMIPKREPWETFVDPGFIAQGK*
Ga0137438_109849623300011431SoilRFMRALGQAMRWMNDPANEKSMVELMTKNLKIDENLAAQTYKFMIPENKSFRGEGVIDGQGMAEMIRFLYEDKMIAEKKPWESFVDPAFLPGK*
Ga0137338_105958723300012174SoilRWINDPANEKAAIELMVQRLKVGAAIATQTYKFIVQDNKSFRHEALIDGPGLTEMIRLLESDKMIPKREPWETFVDPAFLPQAK*
Ga0137362_1060677513300012205Vadose Zone SoilPANEKATVETMMQRLKIDEATATRTYKFMVPENKSFRGEGAIDGPGLAEMIRLLASDQLISKREPWDSFVDPSFLTPAK*
Ga0137377_1129370323300012211Vadose Zone SoilVQRLKVDQAIAVQTYKFMIPENKAFAHEGSIDGAGLAEMIRLLESDKMIGKREPWEMFVDPAFISQAK*
Ga0137459_125106313300012228SoilLGQAMRWLNDPANEKPMVELMTKNLKIDEALAAQTYKFMIPDNKSFRHEGVIDGPGMAEMLRLLADDKMIPKREPWESFVDPAFLPAK*
Ga0137375_1007368653300012360Vadose Zone SoilRPLFTRFVRAMGQAMHWINDSANEKAVTEIVAQRLKIDESTAARTYKFMVPENKAFRNEAAVDGPGLAEMIRLLASDNMIPERKPWETFVDPAFMPAAK*
Ga0157337_103207813300012483Arabidopsis RhizosphereQNRPLFVRYMRAISQGMRWLNDPANEKAAIELMVQRLKVDQAIAVQTYKFMIPENKAFAYEGSIDGAGLAEMIRLLESDKMIAKREPWEMFVDPAFISQAK*
Ga0157355_101779523300012493Unplanted SoilEKAAIELMVQRLKVDQAIAVQTYKFMIPENKAFAYEGSIDGAGLAEMIRLLESDKMIAKREPWEMFVDPAFISQTK*
Ga0157332_100510913300012511SoilLMVQRLKVDQAIAVQTYKFMIPENKAFAYEGSIDGAGLAEMIRLLESDKMIAKREPWEMFVDPAFISQAK*
Ga0157298_1027687123300012913SoilWVNDPANEKAAIELMVQRLKVDPAIAAQTYQFMIPENKAFRGEGLVDGAGLAEMIRLLAADNMIPERKPWESFVDPAFMPAGK*
Ga0137359_1041173113300012923Vadose Zone SoilDEAIAAQTYKFMIPENKAFRGEGSVDGPGLAEMIRLLAADNMIPERKPWESFVDPAFMPAGK*
Ga0153915_1044030523300012931Freshwater WetlandsMRAMGQAMHWLNDPANEKGVTEVMMQRLKIDQTTATRTYKFMVSENNAFRGEGAIDAPGLAEMIRLLANDHVIPKREPWETFVDPAFPITK*
Ga0137410_1052462523300012944Vadose Zone SoilKTQAQNRPLFVRYMRAISQGMRWLNDPANEKAAIELMVQRLKVDQAIAVQTYKFMIPENKAFAHEGSIDGAGLAEMIRLLESDKMIAKREPWEMFVDPAFISQAK*
Ga0126375_1091269113300012948Tropical Forest SoilQNRPLLVRFMRAMGQAMHWVNDPANEKVVIEMLVQRLKIDEATAARTYKFVITENKAFRGEGAIDGPGLAEMIRLLAGDQLIPKREAWESFIDASFLTAPK*
Ga0164302_1000489913300012961SoilSKSLAQNRPLFMRFVRAIGQGMHWVNDPANEKAAIELMVQRLKIDEAIAAQTYKFMIPENKAFRGEGVVDGAGLAEMIRLLAADNMIPERKPWESFVDPAFMPGGK*
Ga0134110_1021751923300012975Grasslands SoilWINDPANEKAVTEVLMQRLKIDEATAVRTYKFMVPENKAFRGEGAIDTAGLAEMIRLLASDQMIPKREPWESFVDGSFPTIK*
Ga0157371_1126634413300013102Corn RhizosphereLAQNRPLFTRFIRAIGQGMRWVNDPANEKAAIELMVQRLKVDPAIAAQTYQFMIPENKAFRGEGLVDGAGLAEMIRLLAADNMIPERKPWESFVDPAFMPAGK*
Ga0157369_1241174413300013105Corn RhizosphereTKSLAQNRQLFTRFIRAIGQGMRWVNDPANEKAAIELMVQRLKVDPAIAAQTYQFMIPENKAFRGEGLVDGAGLAEMIRLLAADNMIPERKPWESFVDPAFMPAGK*
Ga0157375_1051453723300013308Miscanthus RhizosphereEKAAIELMVQRLKVDPAIAAQTYQFMIPENKAFRGEGLVDGAGLAEMIRLLAADNMIPERKPWESFVDPAFMPAGK*
Ga0075351_113790023300014318Natural And Restored WetlandsEKPMVELMTKNLKIDEALAAQTYKFMIPDNKSFRLEGAVDGPGMAEMVRLLFEDKMIPEKKPWESFVDPAFLPAR*
Ga0157377_1057634113300014745Miscanthus RhizosphereDEAIAAQTYKFMIPENKAFRGEGVVDGAGLAEMIRLLAADNMIPERKPWESFVDPAFMPAGK*
Ga0134073_1002480523300015356Grasslands SoilVTKVLVQRLKINEATAARTYKFIVPENKAFRGEGAIDTAGLAEMIRLLASDQMIPKREPWESFVDGSFPTIK*
Ga0134089_1040355213300015358Grasslands SoilRLKIDEATAERTYKFMVPENKAFRGEGAIDVAGLTEMIRLLAADQMIPKREPWETFVDPSFPTIK*
Ga0132258_1341986723300015371Arabidopsis RhizosphereANEKAAIELMVQRLKIDEGIAAQTYRFMIPENKAFRGEGIVDGAGLAEMIRLLAADNMISERKPWETFVDPAFMPAGK*
Ga0132256_10110147723300015372Arabidopsis RhizosphereKIDEGIAAQTYRFMIPENKAFRGEGIVDGAGLAEMIRLLAADNMISERKPWETFVDPAFMPAAK*
Ga0132257_10006421313300015373Arabidopsis RhizosphereKALAQNRSLFTRFIRAIGQGMHWVNDPANEKAAIELMVQRLKIDEGIAAQTYRFMIPENKAFRGEGIVDGAGLAEMIRLLAADNMISERKPWETFVDPAFMPAAK*
Ga0132255_10237593723300015374Arabidopsis RhizosphereVQRLKIDEAIAAQTYKFMIPENKAFRGEGVVDGAGLAEMIRLLAADNMIPERKPWETFVDPAFMPAGK*
Ga0187824_1005128013300017927Freshwater SedimentLYARYMLAIGQGMRWLNDPANEKAAIELMVQRLKVDHAIAEKTYKFMIPENNAFRFEGVIDGPGLAEMIRLLESDKMIPKREPWENFVDAAFMPQGK
Ga0187786_1036555623300017944Tropical PeatlandELMVQRLKIDEAMAAKTYRFMIPDNKSFRLEGTIDGTGMAEMIRLLFEDKMIPEKKSWETFVDSAYLPTK
Ga0184608_1025913823300018028Groundwater SedimentLSQNRPLFVRFMRALGQAMRWINDPANEKAVIEVVAQRLKLDESIAARTYKFMVAENNAFRGLGTIDAAGLTEMIRLLASDNLISKREPWETFVDPAFVPATAK
Ga0184634_1045746613300018031Groundwater SedimentAMHWLNDPANEKGVIEVMMQRLKIDEATAERTYKFMVPENKAFRGEGAIDVAGLTEMIRLLAADQMIPKREPWETFVDPSFPTIK
Ga0184626_1025772423300018053Groundwater SedimentLNDPANEKATTELLVQRMKIDEPTAARTYKFMVPENKSFSAEGAIDGPGLAEMVRLLASDKMIPKQEPWENFVDAGFLPTAK
Ga0184617_112647623300018066Groundwater SedimentWINDPANEKAVTEVVAQRLKLDESIAARTYKFMVPENKAFRNEAQVDGPGLAEMIRLLASDNMIPERKPWETFVDTGFLPATAK
Ga0184640_1032972323300018074Groundwater SedimentLFVRYIRAISQGMRWLNDPANEKAAIELMVQRLKVDQAIAVQTYKFMIPENKAFAHEGSIDGAGLAEMIRLLESDKMIAKREPWEMFVDPAFISQAK
Ga0184632_1011167423300018075Groundwater SedimentGQAMRWINDPANEKAVIEVVAQRLKLDESIAARTYKFMVAENNAFRGLGTIDAAGLTEMIRLLASDNLISKREPWEAFVDPAFIAGGK
Ga0184612_1010959813300018078Groundwater SedimentAQRLKLDESTAARTYKFMVAENNAFRGLGTIDAAGLTEMIRLLASDNLISKREPWEAFVDPAFIAGGK
Ga0184627_1014279413300018079Groundwater SedimentMRALGQAMRWLNDPANDKTMVELMTKNLKIDEALAAQTYKFMIPDNKSFRLEGAVDGPGLAEMVRLLAGDNLIPKREPWEAFVDAGFLPAK
Ga0184625_1004440213300018081Groundwater SedimentNEKGVIEVMMQRLKIDEATAERTYKFMVPENKAFRGEGAIDVAGLTEMIRLLAADQMIPKREPWETFVDPSFPTIK
Ga0184625_1005711233300018081Groundwater SedimentMHWLNDPANEKGVIEVMMQRLKIDEATAERTYKFMVPENKAFRGEGAIDVAGLTEMIRLLAADQMIQKREPWETFVDPSFPTIK
Ga0190265_1085140013300018422SoilRYMRALGQGMRWINDPANEKAAIELMVQRLKIDESIAAQTYKFMIPENKAFRGEGAVDGPGLAEMIRLLEADKMIPKREPWEIFVDPAFISAGK
Ga0190265_1211173623300018422SoilALSKSLAQNRALFTRYMRALGQGMRWINDPSNEKAAIELMVQRLKIDETIAAQTYKFMIPENKAFRGEGAIDGPGLAEMIRLLEADKMIPKREPWEIFVDPTFIPAAK
Ga0173479_1021813513300019362SoilRQLFTRFIRAIGQGMRWVNDPANEKAAIELMVQRLKVDPAIAAQTYQFMIPENKAFHGEGLVDGAGLAEMIRLLAADNMIPERKPWESFVDPAFMPAGK
Ga0190264_1023592723300019377SoilLAQNRPLFTRYMRALGQGMRWINDPANEKAAIELMVQRLKIDESIAAQTYKFMIPENKAFRGEGAIDGPGLVEMIRLLEADKMIPKREPWEIFVDPAFISAGK
Ga0193715_101635923300019878SoilLKVDQAIAVQTYKFMIPENKAFAHEGSIDGAGLAEMIRLLESDKMIAKREPWEMFVDPAFISQAK
Ga0210401_1136763913300020583SoilFASSKSLAQNRPLLVRFMRAMGQAMHWMNDPANEKAVTEILVQRLKLDEPTAARTYKFMIPENKAFRGEGAIDGPGVAEMIRLLAGDQMIPKREPWESFVDASFLSVAK
Ga0210382_1033116923300021080Groundwater SedimentGRFIRALEQAMRWINDPANEKAVTEVVAQRLKLDESIAARTYKFMVPENKAFRNEAQVDGPGLAEMIRLLASDNMIPERKPWETFVDTGFLPATAK
Ga0210377_1023247813300021090Groundwater SedimentRLKVGAAIATQTYKFIVQDNKSFRHEALIDGPGLAEMIRLLELDKMIPKREPWETFVDPAFLPQAK
Ga0210384_1090275413300021432SoilAMGQAMHWMNDPANEKAVTEILVQRLKLDEPTAARTYKFMIPENKAFRGEGAIDGPGVAEMIRLLAGDQMIPKREPWESFVDASFLSVTK
Ga0210138_101446623300025580Natural And Restored WetlandsQAMRWMNDPANEKPMVELMTKNLKIDETLAAQTYKFMIPDNKSFRLEGAIDGPGMAEMVRLLFEDKMIPEKKPWESFVDSAFLPAK
Ga0210114_102771413300025795Natural And Restored WetlandsLMVQRLKVDQAIATQTYKFMIPENKAFRYEGIVDGPGLAEMIRLLESDKMIPRREPWETFVDAAFMPAK
Ga0207710_1065215313300025900Switchgrass RhizospherePANEKAAIELMVQRLKVDPAIAAQTYQFMIPENKAFRGEGLVDGAGLAEMIRLLAADNMIPERKPWESFVDPAFMPAGK
Ga0207644_1060504723300025931Switchgrass RhizosphereSLAQSRPLLTRFMRAIGQAMHWVNDPANEKAAIELMTQALKIDATMAAQTFKFMVADNKSFRLEGANDPVGMTEMIRLLFEDKMIPEKKPWESFVDPAFLPTNK
Ga0207644_1086541723300025931Switchgrass RhizospherePANEKAAIELMVQRLKIDEAIAAQTYKFMIPENKAFRGEGVVDGAGLAEMIRLLAADNMIPERKPWETFVDPAFMPGGK
Ga0207686_1008800833300025934Miscanthus RhizosphereMVQRLKVDPAIAAQTYQFMIPENKAFRGEGLVDGAGLAEMIRLLAADNMIPERKPWESFVDPAFMPAGK
Ga0207711_1205365113300025941Switchgrass RhizosphereLMVQRLKVDPAIAAQTYQFMIPENKAFRGEGLVDGAGLAEMIRLLAADNMIPERKPWESFVDPAFMPAGK
Ga0207651_1019973713300025960Switchgrass RhizosphereKAAIELMVQRLKVDPAIAAQTYQFMIPENKAFRGEGLVDGAGLAEMIRLLAADNMIPERKPWESFVDPAFMPAGK
Ga0207668_1200512613300025972Switchgrass RhizosphereFALNKSLQQNRQLFTRYIRAIGHAQRWLNDPANEKPAIELMVQRLKVDGNIAAQTYKFIVQDNKNFRYEASIDGPGLAEMIRLLEYDKLIPKREPWEMFVDPAFISQAK
Ga0208778_101032913300026025Rice Paddy SoilTHGSAIKIDQAIAAKTYKFMIPENKAFRYEGAIDGAGLAEMIRLLEYDKMIPKREPWEMFVDPAFMPPAK
Ga0208778_101618513300026025Rice Paddy SoilANEKAAVELMVQRLKIDQPIAAKTYKFMIPENKAFRYEGAIDGAGLAEMIRLLESDKMIPRREPWETFVDAAFMPAK
Ga0207641_1056325823300026088Switchgrass RhizosphereIGQAMHWVNDPANEKAAIELMTQALKIDATMAAQTFKFMVADNKSFRLEGANDPVGMTEMIRLLFEDKMIPEKKPWESFVDPAFLPTNK
Ga0209131_127318123300026320Grasslands SoilAQNRPVLTRFMHALGQAMRWMNDPANEKSMVELMTKNLKIDESLAAQTYKFMIPDNKSFRGEGVVDGPGMAEMVRLLFEDKMIPEKKPWESFVDSAFLAAK
Ga0209157_128819213300026537SoilMGQAMRWINDPANEKAVTEVLVQRLKINEATAARTYKFMVPENKAFRGEGAIDTAGLAEMIRLLASDQMIPKREPWESFVDGSFPTIK
Ga0209706_1052090123300027818Freshwater SedimentMTQRLKIDQAIAAQTYKFMIPENKAFRHEGIIDGPGLAEMIRLLESDKMIPKREPWETFVDSTFMPAR
Ga0209974_1005837613300027876Arabidopsis Thaliana RhizosphereQGMRWINDPANEKAAIELMIQRLKIDQGIAAQTYKFMIPENKAFRHEGIIDGAGLAEMIRLLESDKMIPKREPWETFVDPAFMPAAK
Ga0209382_1033729223300027909Populus RhizosphereTRYMRAIGQAQRWLNDPANEKPAIELMVQRLKVDANIAAQTYKFIVQDNKSFRYEASIDGPGLAEMIRLLEYDKLIPKREPWEMFVDPAFISQTK
Ga0307312_1084446213300028828SoilWINDPANEKAVIEIVAQRLKLDEPTAARTYKFMVPENNAFRNEAAVDGAGLAEMIRLLASDNMIPERKPWESFVDPAFMPGGK
(restricted) Ga0255311_108652323300031150Sandy SoilEKPMVELMTKNLKIDEALAAQTYKFMIPDNKSFRFEGVIDGPGMAEMVRLLFTDNMIPKREPWENFVDPSFLPAK
(restricted) Ga0255312_100975733300031248Sandy SoilKNLKVDEALAAQTYKFMIPDNKSFRLEGVVDGPGMAEMVRLLFEDKMIPEKKPWESFVDPAFLPGNK
Ga0310904_1102761213300031854SoilFIRAIGQGMRWVNDPANEKAAIELMVQRLKIDEAIAAQTYKFMIPENKAFRGEGVVDGAGLAEMIRLLAADNMIPERKPWESFVDPAFMPGGK
Ga0307406_1119150923300031901RhizosphereKVDEALAAQTYKFMVPDNKSFRLEGVVDGPGMAEMVRLLFDDKMIPEKKPWETFVDAAFLAGSK
Ga0310885_1021560213300031943SoilAQTKSLGQNRPVFTRFMRAIGQAMRWINDPANEKPMVELMTKNLKIDEGLAAQTYKFMVPDNKSFRLEGVVDGPGMAEMVRLLFDDKMIPEKKPWETFVDAAFLAGSK
Ga0307471_10089009723300032180Hardwood Forest SoilVMMQRLKIDEATAERTYKFMVPENKAFRGEGAIDVAGLIEMIRLLAADQMIPKREPWETFVDPSFPTIK
Ga0310896_1030952113300032211SoilQAMRWMNDPANEKPMVELMTKNLKVDEALAAQTYKFMIPDNKSFGLEGAVDGAGMAEMVRLLFEDKMIPEKKPWESFVDPGFLPAVAK
Ga0306920_10119462733300032261SoilVELMVQRLKIDEPTATRTYKFMVPENKSFRGEGHIDGPGLAEMIRLLASDQLIPKREPWESFVDPSFLTPAK
Ga0335081_1069146713300032892SoilRFMRAMGQAMRWMNEPGNEKAVTEILVQHLKLDEVTAARTYKFMIPENKTFRGEGAIDGPGLAEMIRLLATDQMIPKREPWESFVDPSFLSATK
Ga0334722_1082921013300033233SedimentQSRPLFTRFMRAIGQAMRWMNDPANEKPMVELMTKNLKVDEALAAQTYKFMIPDNKSFRLEGAVDGPGMSEMVRLLFSDNMIPKREPWESFVDPAFLPATK
Ga0316620_1009739733300033480SoilWLNDPANEKAAIELMVQRLKVDQAIAVKTYKFMIPENNAFRFEGAIDGPGLAEMIRLLESDKMIPKREPWENFVDAAFMPQGK
Ga0316628_10055234123300033513SoilMRWLNDPANEKAAIELMVQRLKVDHAIAEKTYKFMIPENNAFRFEGVIDGPGLAEMIRLLESDKMIPKREPWENFVDAAFMPQGK
Ga0364929_0160132_512_7183300034149SedimentMMQRLKIDEATAERTYKFMVPENKAFRGEGAIDVAGLTEMIRLLAADQMIPKRESWETFVDPSFPTIK


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