Metagenome Family F038429

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F038429
Family Type	Metagenome
Number of Sequences	166
Average Sequence Length	41 residues
Representative Sequence	VVEFRTAAGEALAISIPRTEAAVIRHFQERMPYGLFVPDVS
Number of Associated Samples	110
Number of Associated Scaffolds	166

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	7.33 %
% of genes near scaffold ends (potentially truncated)	77.71 %
% of genes from short scaffolds (< 2000 bps)	83.13 %
Associated GOLD sequencing projects	103
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (85.542 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (23.494 % of family members)
Environment Ontology (ENVO)	Unclassified (35.542 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (54.217 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 15.94% β-sheet: 11.59% Coil/Unstructured: 72.46%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 166 Family Scaffolds
PF04392	ABC_sub_bind	3.01
PF08708	PriCT_1	2.41
PF07681	DoxX	1.20
PF09261	Alpha-mann_mid	1.20
PF00483	NTP_transferase	1.20
PF03401	TctC	0.60
PF00072	Response_reg	0.60
PF00106	adh_short	0.60
PF03795	YCII	0.60
PF05239	PRC	0.60
PF00581	Rhodanese	0.60
PF03734	YkuD	0.60
PF04430	DUF498	0.60
PF01741	MscL	0.60
PF13545	HTH_Crp_2	0.60
PF00486	Trans_reg_C	0.60
PF13701	DDE_Tnp_1_4	0.60
PF07045	DUF1330	0.60
PF03695	UPF0149	0.60
PF01135	PCMT	0.60
PF01970	TctA	0.60
PF01381	HTH_3	0.60
PF02776	TPP_enzyme_N	0.60
PF06577	EipA	0.60
PF13304	AAA_21	0.60
PF13560	HTH_31	0.60
PF13709	DUF4159	0.60
PF01255	Prenyltransf	0.60
PF02518	HATPase_c	0.60
PF04326	AlbA_2	0.60
PF08241	Methyltransf_11	0.60
PF01391	Collagen	0.60
PF03144	GTP_EFTU_D2	0.60

COG ID	Name	Functional Category	% Frequency in 166 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	3.01
COG0383	Alpha-mannosidase	Carbohydrate transport and metabolism [G]	1.20
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	1.20
COG4270	Uncharacterized membrane protein	Function unknown [S]	1.20
COG0020	Undecaprenyl pyrophosphate synthase	Lipid transport and metabolism [I]	0.60
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	0.60
COG1504	Uncharacterized conserved protein, DUF498 domain	Function unknown [S]	0.60
COG1784	TctA family transporter	General function prediction only [R]	0.60
COG1970	Large-conductance mechanosensitive channel	Cell wall/membrane/envelope biogenesis [M]	0.60
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	0.60
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.60
COG2518	Protein-L-isoaspartate O-methyltransferase	Posttranslational modification, protein turnover, chaperones [O]	0.60
COG2519	tRNA A58 N-methylase Trm61	Translation, ribosomal structure and biogenesis [J]	0.60
COG2865	Predicted transcriptional regulator, contains HTH domain	Transcription [K]	0.60
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	0.60
COG3079	Uncharacterized conserved protein YgfB, UPF0149 family	Function unknown [S]	0.60
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.60
COG3333	TctA family transporter	General function prediction only [R]	0.60
COG3737	Uncharacterized protein, contains Mth938-like domain	Function unknown [S]	0.60
COG4122	tRNA 5-hydroxyU34 O-methylase TrmR/YrrM	Translation, ribosomal structure and biogenesis [J]	0.60
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	0.60

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	85.54 %
Unclassified	root	N/A	14.46 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	85.54 %
Unclassified	root	N/A	14.46 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	85.54 %
Unclassified	root	N/A	14.46 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	78.31 %
Unclassified	root	N/A	14.46 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	3.61 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	74.10 %
Unclassified	root	N/A	14.46 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.81 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.46 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	10.84 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7.23 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.81 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.20 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	0.60 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.46 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	10.24 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.81 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.20 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.60 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.60 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	0.60 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.46 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	10.24 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.41 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.81 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	1.20 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.60 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.60 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.60 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.46 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	10.24 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.81 %
unclassified Acidobacterium	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium	1.20 %
Mesorhizobium loti	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium loti	0.60 %
Bradyrhizobium diazoefficiens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	0.60 %
Bradyrhizobium manausense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium manausense	0.60 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.60 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.60 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.46 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	10.24 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.81 %
Acidobacterium sp. S8	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp. S8	1.20 %
Mesorhizobium loti	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium loti	0.60 %
Bradyrhizobium diazoefficiens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	0.60 %
Bradyrhizobium manausense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium manausense	0.60 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.60 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.60 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.60 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908045\|KansclcFeb2_ConsensusfromContig1234259	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	776	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101449217	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	814	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101462528	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	955	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10059989	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	976	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10074497	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	730	Open in IMG/M
3300000955\|JGI1027J12803_103941171	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	975	Open in IMG/M
3300000956\|JGI10216J12902_101584467	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	544	Open in IMG/M
3300000956\|JGI10216J12902_112413217	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	692	Open in IMG/M
3300004281\|Ga0066397_10020948	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	971	Open in IMG/M
3300004479\|Ga0062595_100476011	All Organisms → cellular organisms → Bacteria → Proteobacteria	928	Open in IMG/M
3300005174\|Ga0066680_10314393	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1000	Open in IMG/M
3300005332\|Ga0066388_101196029	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1299	Open in IMG/M
3300005332\|Ga0066388_101632650	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1136	Open in IMG/M
3300005332\|Ga0066388_107627439	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	542	Open in IMG/M
3300005436\|Ga0070713_100622431	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1027	Open in IMG/M
3300005445\|Ga0070708_101603273	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	606	Open in IMG/M
3300005467\|Ga0070706_100282081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1550	Open in IMG/M
3300005555\|Ga0066692_10253092	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1112	Open in IMG/M
3300005713\|Ga0066905_101194314	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	680	Open in IMG/M
3300005713\|Ga0066905_101892885	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	552	Open in IMG/M
3300005713\|Ga0066905_102216878	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	512	Open in IMG/M
3300005713\|Ga0066905_102264644	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	507	Open in IMG/M
3300005764\|Ga0066903_101341553	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1339	Open in IMG/M
3300005764\|Ga0066903_103464644	All Organisms → cellular organisms → Bacteria → Proteobacteria	851	Open in IMG/M
3300005764\|Ga0066903_104172478	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	773	Open in IMG/M
3300005764\|Ga0066903_104920986	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	709	Open in IMG/M
3300005764\|Ga0066903_105522342	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300005764\|Ga0066903_107008639	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	584	Open in IMG/M
3300005764\|Ga0066903_107388169	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	568	Open in IMG/M
3300005764\|Ga0066903_107749618	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	552	Open in IMG/M
3300005764\|Ga0066903_109167656	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	500	Open in IMG/M
3300006028\|Ga0070717_10474837	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1129	Open in IMG/M
3300006028\|Ga0070717_11163480	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	702	Open in IMG/M
3300006032\|Ga0066696_10917499	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	557	Open in IMG/M
3300006163\|Ga0070715_10900271	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	544	Open in IMG/M
3300006175\|Ga0070712_101674534	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	557	Open in IMG/M
3300006847\|Ga0075431_102010857	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	533	Open in IMG/M
3300007076\|Ga0075435_102046617	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	503	Open in IMG/M
3300009100\|Ga0075418_11179886	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	830	Open in IMG/M
3300009792\|Ga0126374_10609637	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	807	Open in IMG/M
3300010046\|Ga0126384_10256882	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1415	Open in IMG/M
3300010046\|Ga0126384_10608235	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	958	Open in IMG/M
3300010047\|Ga0126382_10457311	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1014	Open in IMG/M
3300010047\|Ga0126382_10816903	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	797	Open in IMG/M
3300010047\|Ga0126382_10925081	Not Available	757	Open in IMG/M
3300010047\|Ga0126382_11145459	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	693	Open in IMG/M
3300010321\|Ga0134067_10124760	All Organisms → cellular organisms → Bacteria → Proteobacteria	900	Open in IMG/M
3300010360\|Ga0126372_10023083	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp. S8	3722	Open in IMG/M
3300010360\|Ga0126372_10028226	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3464	Open in IMG/M
3300010361\|Ga0126378_11591617	Not Available	742	Open in IMG/M
3300010361\|Ga0126378_13322803	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	511	Open in IMG/M
3300010362\|Ga0126377_10024266	All Organisms → cellular organisms → Bacteria → Proteobacteria	5035	Open in IMG/M
3300010376\|Ga0126381_103001655	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	670	Open in IMG/M
3300010398\|Ga0126383_11388267	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	792	Open in IMG/M
3300010398\|Ga0126383_12828523	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	567	Open in IMG/M
3300010398\|Ga0126383_12875449	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	562	Open in IMG/M
3300010398\|Ga0126383_13376638	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	521	Open in IMG/M
3300012199\|Ga0137383_10089177	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2233	Open in IMG/M
3300012199\|Ga0137383_10819500	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	679	Open in IMG/M
3300012201\|Ga0137365_10024249	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4694	Open in IMG/M
3300012201\|Ga0137365_11079509	Not Available	579	Open in IMG/M
3300012202\|Ga0137363_10758753	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	822	Open in IMG/M
3300012211\|Ga0137377_11095099	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	727	Open in IMG/M
3300012211\|Ga0137377_11440271	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	616	Open in IMG/M
3300012211\|Ga0137377_11469907	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	608	Open in IMG/M
3300012354\|Ga0137366_11070724	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	556	Open in IMG/M
3300012355\|Ga0137369_10903532	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	593	Open in IMG/M
3300012356\|Ga0137371_10309378	All Organisms → cellular organisms → Bacteria → Proteobacteria	1230	Open in IMG/M
3300012356\|Ga0137371_10642486	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	813	Open in IMG/M
3300012361\|Ga0137360_10458240	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1081	Open in IMG/M
3300012929\|Ga0137404_10810654	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	851	Open in IMG/M
3300012948\|Ga0126375_10507867	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	900	Open in IMG/M
3300012948\|Ga0126375_11788773	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	536	Open in IMG/M
3300012948\|Ga0126375_12045219	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	507	Open in IMG/M
3300012961\|Ga0164302_11793794	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	518	Open in IMG/M
3300012971\|Ga0126369_10820180	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1013	Open in IMG/M
3300012971\|Ga0126369_11273925	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	825	Open in IMG/M
3300012971\|Ga0126369_13232264	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	534	Open in IMG/M
3300012984\|Ga0164309_10177813	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1443	Open in IMG/M
3300012988\|Ga0164306_10074927	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2134	Open in IMG/M
3300016294\|Ga0182041_10935290	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	781	Open in IMG/M
3300016294\|Ga0182041_11493433	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	622	Open in IMG/M
3300016319\|Ga0182033_11290523	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	656	Open in IMG/M
3300016341\|Ga0182035_10091071	All Organisms → cellular organisms → Bacteria → Proteobacteria	2207	Open in IMG/M
3300016341\|Ga0182035_10335574	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1251	Open in IMG/M
3300016341\|Ga0182035_10492699	All Organisms → cellular organisms → Bacteria	1045	Open in IMG/M
3300016357\|Ga0182032_10966731	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	726	Open in IMG/M
3300016357\|Ga0182032_11272170	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	634	Open in IMG/M
3300016371\|Ga0182034_10207311	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1520	Open in IMG/M
3300016371\|Ga0182034_10594767	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	933	Open in IMG/M
3300016387\|Ga0182040_10195522	All Organisms → cellular organisms → Bacteria → Proteobacteria	1482	Open in IMG/M
3300016445\|Ga0182038_10459820	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1079	Open in IMG/M
3300016445\|Ga0182038_11714023	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	566	Open in IMG/M
3300018073\|Ga0184624_10486174	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	538	Open in IMG/M
3300018469\|Ga0190270_11145048	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	813	Open in IMG/M
3300020580\|Ga0210403_11340688	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	545	Open in IMG/M
3300021560\|Ga0126371_10900723	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1028	Open in IMG/M
3300025910\|Ga0207684_10270366	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1466	Open in IMG/M
3300025915\|Ga0207693_10646041	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	822	Open in IMG/M
3300025916\|Ga0207663_11630418	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	519	Open in IMG/M
3300026277\|Ga0209350_1109698	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	643	Open in IMG/M
3300026325\|Ga0209152_10419726	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	530	Open in IMG/M
3300026538\|Ga0209056_10318307	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1055	Open in IMG/M
3300026551\|Ga0209648_10493874	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	716	Open in IMG/M
3300027161\|Ga0208368_105662	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium loti	662	Open in IMG/M
3300027874\|Ga0209465_10046081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2080	Open in IMG/M
3300027909\|Ga0209382_12203321	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	521	Open in IMG/M
3300031572\|Ga0318515_10161730	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1195	Open in IMG/M
3300031572\|Ga0318515_10221026	All Organisms → cellular organisms → Bacteria	1016	Open in IMG/M
3300031573\|Ga0310915_10128947	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1733	Open in IMG/M
3300031573\|Ga0310915_11089073	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	555	Open in IMG/M
3300031679\|Ga0318561_10297143	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	883	Open in IMG/M
3300031681\|Ga0318572_10166419	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1278	Open in IMG/M
3300031713\|Ga0318496_10651085	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300031720\|Ga0307469_11350321	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	678	Open in IMG/M
3300031723\|Ga0318493_10357446	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	795	Open in IMG/M
3300031724\|Ga0318500_10042556	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1890	Open in IMG/M
3300031736\|Ga0318501_10639823	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	585	Open in IMG/M
3300031763\|Ga0318537_10395611	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	510	Open in IMG/M
3300031771\|Ga0318546_11318629	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	507	Open in IMG/M
3300031777\|Ga0318543_10563731	Not Available	510	Open in IMG/M
3300031780\|Ga0318508_1231657	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	530	Open in IMG/M
3300031781\|Ga0318547_10873540	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	561	Open in IMG/M
3300031793\|Ga0318548_10424434	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	651	Open in IMG/M
3300031795\|Ga0318557_10452169	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	590	Open in IMG/M
3300031819\|Ga0318568_10764841	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	600	Open in IMG/M
3300031821\|Ga0318567_10231596	Not Available	1035	Open in IMG/M
3300031880\|Ga0318544_10008541	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp. S8	3161	Open in IMG/M
3300031890\|Ga0306925_10736398	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1028	Open in IMG/M
3300031894\|Ga0318522_10063891	Not Available	1321	Open in IMG/M
3300031896\|Ga0318551_10347314	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	839	Open in IMG/M
3300031897\|Ga0318520_10273292	All Organisms → cellular organisms → Bacteria	1013	Open in IMG/M
3300031910\|Ga0306923_11425310	Not Available	728	Open in IMG/M
3300031946\|Ga0310910_10050037	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2940	Open in IMG/M
3300031946\|Ga0310910_10261955	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1354	Open in IMG/M
3300031947\|Ga0310909_10262145	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	1445	Open in IMG/M
3300031947\|Ga0310909_10769241	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	797	Open in IMG/M
3300032001\|Ga0306922_10111099	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2907	Open in IMG/M
3300032001\|Ga0306922_11397688	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	704	Open in IMG/M
3300032025\|Ga0318507_10335139	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	659	Open in IMG/M
3300032054\|Ga0318570_10309886	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	718	Open in IMG/M
3300032059\|Ga0318533_10769090	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	707	Open in IMG/M
3300032066\|Ga0318514_10784473	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	507	Open in IMG/M
3300032076\|Ga0306924_12403183	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium manausense	531	Open in IMG/M
3300032090\|Ga0318518_10457211	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	654	Open in IMG/M
3300032180\|Ga0307471_102839691	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	615	Open in IMG/M
3300032261\|Ga0306920_100029805	All Organisms → cellular organisms → Bacteria	7769	Open in IMG/M
3300033289\|Ga0310914_11130765	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	684	Open in IMG/M
3300033290\|Ga0318519_10272454	Not Available	985	Open in IMG/M
3300033290\|Ga0318519_10387654	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	830	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.59%
Host-Associated	Host-Associated	2.41%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.99%
Plants	Host-Associated → Plants	2.41%
Aquatic	Environmental → Aquatic	0.60%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.99%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.41%
Sediment	Environmental → Aquatic → Sediment	0.60%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	77.71%
Loam	Environmental → Terrestrial → Soil → Loam	19.28%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.41%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.60%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	38.55%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.12%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.05%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.43%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.23%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.41%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.60%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.60%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	23.49%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	16.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.65%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	11.45%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.23%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.23%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.41%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.41%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.20%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.20%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.20%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.60%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.60%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.60%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004281	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027161	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF032 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
KansclcFeb2_02601450	2124908045	Soil	MMARTSYIVEFRTAEGEALAISIPGSEAAVIRHFQERMPYGLFVPDVP
INPhiseqgaiiFebDRAFT_1014492172	3300000364	Soil	VIEFMTTEGNVLAISIPRTEAHVIRHFQERMPYGLFVPDLALE*
INPhiseqgaiiFebDRAFT_1014625282	3300000364	Soil	VVEFRTAAGEALAISIPRTETAMVKHFQERMPYGLFVPDLV*
AF_2010_repII_A1DRAFT_100599892	3300000597	Forest Soil	RTAAGEALAISIPRSEASVVRYFQERTPYGLFVPEVT*
AF_2010_repII_A001DRAFT_100744973	3300000793	Forest Soil	AAGEALAISIPASETGVIRHFQERMPYGLFVPDTP*
JGI1027J12803_1039411713	3300000955	Soil	TYIVEFKTAADEALAISIPEAAVIQHFQERMPYGLFVPDVSDSR*
JGI10216J12902_1015844671	3300000956	Soil	DGTYVVEFRTAGETLAISIPRTEAAVTRHFQERMPYGLFVPDVDAGAI*
JGI10216J12902_1124132173	3300000956	Soil	MTCPAPFYLVEFRTAAGESLAISIPRTEAAVIRHFQERMPYGLFVPDVP*
Ga0066397_100209482	3300004281	Tropical Forest Soil	MEFKAAAGEALAISIPRAEAPVIRYLHARMLHGLVVPDVP*
Ga0062595_1004760113	3300004479	Soil	GTYVIEFRTAAGESLAISIPGTEAAVIRHFQERMPYGLFVPDVDSGVE*
Ga0066680_103143931	3300005174	Soil	KNDGTYIVEFRTAEGKTLAISIPRTETAVIRHFQERMPYGLFVPDVP*
Ga0066388_1011960292	3300005332	Tropical Forest Soil	VVEFKTAEGETLAISIPRTETGVIQHFQERISYGLFMPEH*
Ga0066388_1016326503	3300005332	Tropical Forest Soil	YIVEFRTAAGEALAISIPGGEARVIRHFQERMPYGLFVPDVP*
Ga0066388_1076274391	3300005332	Tropical Forest Soil	DGTYVVEFRTAAGEALAISIPATETRVIRHFQDRMRYGLFVSDVP*
Ga0070713_1006224313	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MATYVIEFKTAAGEVLAISIPRTETAVIRHFQERMPYGLFVPDIP*
Ga0070708_1016032731	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	RTSVGESLAISIRRTEAAVIRHFQERMPYGLYVPDVHESG*
Ga0070706_1002820811	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	LSNLAMADGEALAISIPIIETAVIRHFQGRMPYGLFVPDVNAI*
Ga0066692_102530921	3300005555	Soil	YIVEFRTAEGKTLAISIPRTETAVIRHFQERMPYGLFVPDAP*
Ga0066704_105723283	3300005557	Soil	QEPDHDFRPEEDGTYVVEFKTAAGEALAISIPRTECAVTGLFVPDVEAT*
Ga0066905_1011943141	3300005713	Tropical Forest Soil	KAAAGEALAISIPRTEAPMIRYFRARMPYGLVVPDVP*
Ga0066905_1018928851	3300005713	Tropical Forest Soil	MVEFRTAAGEALAISIPRNEAAVIRHFQERMPYGLFVPEVE*
Ga0066905_1022168781	3300005713	Tropical Forest Soil	KDDGTYIVAAAGEALAISIPRNEASVIRHFQERMPYGLFVPDVP*
Ga0066905_1022646442	3300005713	Tropical Forest Soil	YIVEFRTAAGEALAISITRSEASVVRYFQERMPYGLFVPDIP*
Ga0066903_1013415533	3300005764	Tropical Forest Soil	FRTAAGEALAISIPRTEASVVRHFQERMPYGLFVPDVP*
Ga0066903_1034646441	3300005764	Tropical Forest Soil	GEALAISIPRGETAVIRHFQERMPYGLFVPEVLSE*
Ga0066903_1041724781	3300005764	Tropical Forest Soil	VVEFRTAAGEALAISIPRTEAAVIRHFQERMPYGLFVPDVS*
Ga0066903_1049209862	3300005764	Tropical Forest Soil	MEFKAAAGEALAISIPRTEAPVIRYFQARMPYGLVVPDVL*
Ga0066903_1055223422	3300005764	Tropical Forest Soil	DGTYVVEFRTAAGEALAISIPRTETAVIRHFQERMPYGLFVPDVEAGAI*
Ga0066903_1070086391	3300005764	Tropical Forest Soil	TARKTTGHVVEFRTGAGEALAISIPRSEASVIRHFQERMPYGLFVPDVP*
Ga0066903_1073881692	3300005764	Tropical Forest Soil	TAAGEALAISIPRTEAAVIRYFQERMPYGLFVPDAEPQ*
Ga0066903_1077496182	3300005764	Tropical Forest Soil	LQAPTAAGEALAISIPRAEAPVIRYFQARMPYGLVVPDVP*
Ga0066903_1091676562	3300005764	Tropical Forest Soil	GTYVVEFRTAAGEALAISIPRNEAGVIRHFQERMPYGLFVPDVP*
Ga0070717_104748373	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	DGTYVIEFWRTAGEALAISVPRNEAAVLKHFQERMPYGLFVPDVP*
Ga0070717_111634802	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	AGQALAISIPSTETEVIRHFQERMPHGLFVPEVP*
Ga0066696_109174991	3300006032	Soil	EGESLAITIPRTEAAVIKHFQARMPYGPILPDGPLEVGD*
Ga0070715_109002712	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	VEFKTADGEELAISVPRNETAVLKHFQERIPYGLFVPDAPGNL*
Ga0070712_1016745343	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	AGEALAISISRTETAVIRHFQERMPYGLFVLDVP*
Ga0075431_1020108572	3300006847	Populus Rhizosphere	IVEFRTAAGEALAISIPNSETAVLKHFQERMPYGLFVPDVDQP*
Ga0075435_1020466171	3300007076	Populus Rhizosphere	VEFRTADGEALAISIPRSEAHVIRHFQERMPYGLFVPEVPTS*
Ga0075418_111798861	3300009100	Populus Rhizosphere	GTHVVEFMTSKGDALSISIPRNETAVIKHFQERMRYGLFVPDVTAF*
Ga0126374_106096372	3300009792	Tropical Forest Soil	MEFKAAAGEALAISIPRAEAPVIRYLQTRMPHGLVVPDVP*
Ga0126384_102568821	3300010046	Tropical Forest Soil	RTAQGAVLAISIPRTEAAVIRHFQERMPYGLFVPDTEPQ*
Ga0126384_106082351	3300010046	Tropical Forest Soil	MAIVEFKTAAGEALAISIPRAEASVIRHFQEVMPYGLFVPDVP*
Ga0126382_104573111	3300010047	Tropical Forest Soil	DDGTYVVEFKTAADEVLAISAPGGEARVIRHFQERVPYGLFVPEVA*
Ga0126382_108169032	3300010047	Tropical Forest Soil	DGTYVVEFRTESAVLAISIPRTEAAVVRHFQERMPYGLFVPDVP*
Ga0126382_109250811	3300010047	Tropical Forest Soil	VNTRIVEFKTANGALAISIPRTECAVIRHFQERMPHGLVVQDVS*
Ga0126382_111454591	3300010047	Tropical Forest Soil	TYVVEFRTAAGEALAISIPRTEDGVIRHFQERMPYGLFVPDVP*
Ga0126382_114709482	3300010047	Tropical Forest Soil	MANETPAISIPRTEAAVVRHFKERMPYGLFVPDVN
Ga0134067_101247603	3300010321	Grasslands Soil	EGEALAISIPRTEAAVIRHFQSKMPYGLVVPDVKPDTDR*
Ga0126372_100230831	3300010360	Tropical Forest Soil	RTAEGESLAISIPRTETAVIRHFQERMPHGLLFVPDVL*
Ga0126372_100282265	3300010360	Tropical Forest Soil	AGKALAISIPRTETAVIRHFQERMPYGLFVPEVPSE*
Ga0126378_115916171	3300010361	Tropical Forest Soil	AGEALAISIPRTEAGVIRHFQERMPYGLFVPDVP*
Ga0126378_124440342	3300010361	Tropical Forest Soil	PDDTYVIEFKTADGQTLAISMPRGEWVVLKHFQERMPYGLFVPDIQ*
Ga0126378_133228031	3300010361	Tropical Forest Soil	AAGEALAISIPGSDAGVIRHFQERMPYGLFVPDVS*
Ga0126377_100242661	3300010362	Tropical Forest Soil	TAAGKALAISIPRTETAVIRHFQERMPYGLFVPEVPSE*
Ga0126381_1030016552	3300010376	Tropical Forest Soil	AGEALAISIPRTEASVVRYFQERMPYGLFVPDVA*
Ga0126383_113882671	3300010398	Tropical Forest Soil	DGTYVVEFRTAAGEALAISIPRTETAVIRYFQERMPYGLFVADVTDATA*
Ga0126383_128285231	3300010398	Tropical Forest Soil	ISIPRTEAAVIRHFQERMPYGLFVPDEPNLGETQ*
Ga0126383_128754492	3300010398	Tropical Forest Soil	VEFKTAAGATLAISIPRTEADVVRHFQERMPYGLFVPDMNAI*
Ga0126383_133766382	3300010398	Tropical Forest Soil	EFRTAAGEALAISIPRSEASVIRHFQERMPYGLFVPDVP*
Ga0137383_100891773	3300012199	Vadose Zone Soil	VVEFRTAEGDALAISIPRTEAHVIWHFQEWMPYGVLVLDVNAVE*
Ga0137383_108195001	3300012199	Vadose Zone Soil	GEALAISIPRGETAVIRHFQERMPYGLFVPDVSVG*
Ga0137365_100242491	3300012201	Vadose Zone Soil	VVDRTAAGEALAILIPRVECAVIRHFQERMPYGLFVPDVP*
Ga0137365_110795092	3300012201	Vadose Zone Soil	RAWALAISIPRSEAAVIRHFQERVPYGLVVPEAP*
Ga0137363_107587531	3300012202	Vadose Zone Soil	AGEALAISIPRSEGGGDPAHFQERMPYGLFVPDVPS*
Ga0137399_103408222	3300012203	Vadose Zone Soil	AEGDALAISIPRTEAAVIRHFQAKMPYELVVPDVKAD*
Ga0137379_105538341	3300012209	Vadose Zone Soil	MKPAAGEALAISIPRNEAGVIRHFQERMPYGLFVPDVP*
Ga0137377_110950993	3300012211	Vadose Zone Soil	FRTADGDVLTISIPGTEAAVIRHFQERMPYGLFVPDADVFGS*
Ga0137377_114402712	3300012211	Vadose Zone Soil	MTSEGDVLAISIPRTEVHVIRHFQERMPYSLFVPDVPMSL*
Ga0137377_114699073	3300012211	Vadose Zone Soil	MKPAAGEALAISIPRNEAGVIRHFQERMPYGLFVP
Ga0137366_110707241	3300012354	Vadose Zone Soil	FRTAAGEPLAISIPGTEAAVIRHFQERMPYGLFVPDVDSGVE*
Ga0137369_109035321	3300012355	Vadose Zone Soil	PKNDGTYVVECITATGEVLAISIPRSEVHVIRYFQERMPYGLFVPDDVT*
Ga0137369_110727721	3300012355	Vadose Zone Soil	DGESLAISVPGSEGAVIRYFQERMPYGLFVPDAA*
Ga0137371_103093783	3300012356	Vadose Zone Soil	LVEFRTAAGESLAISIPRTEAAVIRHFKERMPYGLFVPDVNAG*
Ga0137371_106424862	3300012356	Vadose Zone Soil	GGEALAISIPRTEAAVIRHFQERMPYGLFVPDVNAI*
Ga0137360_104582401	3300012361	Vadose Zone Soil	FRTAAGEALAISIPRTEAAVIRHFQERMPYGLFVPDVDTSK*
Ga0137390_101829181	3300012363	Vadose Zone Soil	WQLRFEFRTSVGESLAISIRRTEAAVIHHFQERMPYGLYVPNVHESG*
Ga0137404_108106542	3300012929	Vadose Zone Soil	VIEFRTAAGESLAISIPGTEAAVIRHFQERMPYGLFVPDVDSGVE*
Ga0126375_105078671	3300012948	Tropical Forest Soil	AAGATLAISIPRTEADVVRHFQERMPYGLFVPDIP*
Ga0126375_117887732	3300012948	Tropical Forest Soil	YVVEFRTAAGEALAISIPGGEARVIRYFQERMPYGLFVPDVL*
Ga0126375_120452192	3300012948	Tropical Forest Soil	PKSDGTYVEFRTAAGEALAISVPRNEAAVIRHFQERMPYGLFVPDVP*
Ga0164302_117937941	3300012961	Soil	RTAAGEALAISIPGTEAAVIRHFQARMPYGLVVPDAD*
Ga0126369_102721141	3300012971	Tropical Forest Soil	MANETPAISIPRTEAAVVRHFKERMPYGLFVPDVNAI*
Ga0126369_108201801	3300012971	Tropical Forest Soil	IVEFKTAAGEALAISIPRTEAAVIRHFQERMPYGLFVPDVP*
Ga0126369_112739251	3300012971	Tropical Forest Soil	AGEALAISIPRTETAVIRHFQERMPYGLFVPEVP*
Ga0126369_132322641	3300012971	Tropical Forest Soil	TYVVEFRTSDGETLAISIPRTECAVVRHFQERMPYGLFVPDVDPQ*
Ga0164309_101778131	3300012984	Soil	AGDALAISIPRSEVSVIRHFQERMPYGLFVPEVET*
Ga0164306_100749273	3300012988	Soil	AEGDVLAISTPRSEAAMLRHFQERMPYGLCVPDVAM*
Ga0182041_109352901	3300016294	Soil	YIVEFRTAAGEALAISIPRTEAAVVRHFQERMPYGLFVPDVP
Ga0182041_114934332	3300016294	Soil	FRTAAGEALAISIPRSEASVVRYFQERMPYGLFVPDIS
Ga0182033_112905231	3300016319	Soil	FRTAAGEALAISIPRTEAAVARHFQERMPYGLFVPDVP
Ga0182035_100910711	3300016341	Soil	RTAEGAVLAISIPRSEAALIQHFQERMPYGLFVPDVNSGA
Ga0182035_101154905	3300016341	Soil	GEALAISIPRTEAAVIRHFQERMPYGLFVPDAEPR
Ga0182035_103355741	3300016341	Soil	PKDDGTYIVEFRTAAGEALAISIPRSEASVIRHFQERMPYGLFVPDVP
Ga0182035_104926992	3300016341	Soil	DDGTYVVEFRTAASAVLAISIPRTETAVIRYFQERMPYGLFVPDAP
Ga0182032_109667312	3300016357	Soil	TYIVEFRTAAGEALAISIPRTEAAVVRHFQERMPYGLFVPDVP
Ga0182032_112721701	3300016357	Soil	DDGTYIVEFRTAAGEALAISIPRTEAAVARHFQERMPYGLFVPDVP
Ga0182034_102073111	3300016371	Soil	KTDGTYVVEFRTAEGEALAISIPRTETAVIRHFQERMPYGLFVPDMNAI
Ga0182034_105947672	3300016371	Soil	YVIEFKAAAGEALAILIPRTETAVVRHFQERMPYGLFVPDIP
Ga0182040_101955224	3300016387	Soil	TAEGEALAISIPRTETAVIRHFQERMPYGLFVPDMNAI
Ga0182038_104598201	3300016445	Soil	KTDGTYVVEFRTAAGEALAISIPRTETAVIRHFQERMPYGLFVPDEP
Ga0182038_117140232	3300016445	Soil	RTAAGEALAISIPRSEASVVRYFQERMPYGLFVPDIS
Ga0184624_104861741	3300018073	Groundwater Sediment	LGLLLLAAGEALAISIPRTEAAVIRYFQERMPYGLFVPEVL
Ga0190270_111450482	3300018469	Soil	DGTFVIEFMTSAGEALAISIPASEARVARHFQERIPYGLFVPDVSMD
Ga0210403_113406882	3300020580	Soil	MASDGTYIVEFRTAAGEALAISIPRTEATVIRHFQARMPYGLVVRDIDNR
Ga0126371_109007232	3300021560	Tropical Forest Soil	YIVEFRTAAGEALAISIPRSEASVVRYFQERMPYGLFVPDIP
Ga0207684_101486581	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	GEALAISIPIIETAVIRHFQGRMPYGLFVPDVNAI
Ga0207684_102703663	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MATYVIEFKTAAGEVLAISIPRTETAVIRHFQERMPYGLFVPDIP
Ga0207693_106460411	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MRGKNRIVVQFRTAEGDMLAISIPRSETAVIRHFQERMPYGLFVPDVQP
Ga0207663_116304182	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	RTAAGEALAISIPRTECAVIRHFQERMPYGLFVPDLNKP
Ga0207646_111124531	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	TDDTYVIEFRTAAGEALAISVPRNETAVLKHFQERMPYELFVPDVP
Ga0209350_11096982	3300026277	Grasslands Soil	IEFRTAAGESLAISIPGTEAAVIRHFQERMPYGLFVPDVDSGVE
Ga0209152_104197262	3300026325	Soil	ETYVVEFRTAAGEALAISIPIIETAVIRHFQGRMPYGLFVPVNAI
Ga0209056_103183071	3300026538	Soil	ETYVVEFRTAAGEALAISIPIIETAVIRHFQGRMPYGLFVPDVNAI
Ga0209648_104938742	3300026551	Grasslands Soil	YVVEFRTAAGEVLAISIPRGETAVLKHFQERMPYGLFVPDVNPDADP
Ga0208368_1056622	3300027161	Forest Soil	RTAAGEALAISIPGGEARVIRHFQERMPYGLFVPDVP
Ga0209465_100460812	3300027874	Tropical Forest Soil	MEFKAAAGEALAISIPRAEAPVIRYLHARMLHGLVVPDVP
Ga0209465_105161152	3300027874	Tropical Forest Soil	MGVALAISIPRTEAAVIRHFQERMPYGLFVPDARLV
Ga0209382_122033212	3300027909	Populus Rhizosphere	PTADGEELAISAPRNETAVLKHFQERIPYGLFVPDAPGNL
Ga0318515_101617301	3300031572	Soil	SRTAAGEALAISIPRTETAVIRHFQERMPYGLFVPDVT
Ga0318515_102210262	3300031572	Soil	FRTAASAVLAISIPRTETAVIRYFQERMPYGLFVPDAP
Ga0310915_101289471	3300031573	Soil	TAAGEALAISIPRSEASVIRHFQERMPYGLSVPDVP
Ga0310915_110890732	3300031573	Soil	KDDGAYIVEFRTAAGEALAISIPRSEAVVRYFQERMPYGLFVPDIS
Ga0318561_102971432	3300031679	Soil	TYVVEFRTAAGEALAISLPASETRVIRHFQERMPSGLFVPDTP
Ga0318561_104472092	3300031679	Soil	PKTDGTYVVEFRTAEGEALAISIPRTETAVIRHFQERMPYGLFVPDMNAI
Ga0318561_108091971	3300031679	Soil	MGAALAISIPRTEAAAIRHFRERMPYGLFVPDARLV
Ga0318572_101664194	3300031681	Soil	TYVVEFRTAAGEALAISIPRTEAAVIRHFHERMPYGLFVPDVNGV
Ga0318496_106510852	3300031713	Soil	YVVEFRTAAGEALAISIPRTETAVIRHFQERMQYGLFVPDAP
Ga0307469_113503211	3300031720	Hardwood Forest Soil	EFRTAAGEALAISIPRTECAVIRHFQERMPYGLFVPDLNKP
Ga0318493_103574461	3300031723	Soil	TYVVEFRTAAGEALAISIPRTETAVIRHFQERMPYGLFVPDEP
Ga0318500_100425565	3300031724	Soil	EFRTAAGEALAISIPRSEASVVRYFQERMPYGLFVPDIS
Ga0318501_106398232	3300031736	Soil	RTAAGEALAISIPRTEAAVIRHFQERMPYGLFVPDAEPR
Ga0318537_103956111	3300031763	Soil	FKTAAGEALAISIPRTEAAVIRHFQERMPYGLFVPDVNAI
Ga0318546_113186291	3300031771	Soil	RASDGESLAISIPRTECAVIRHFQDRMPYGLVVPDLP
Ga0318543_105637311	3300031777	Soil	VIEFRTAGGDSLAISIPRTEAAVIRHFQTWMPYGLVVPDVDAAK
Ga0318508_12316572	3300031780	Soil	MTYVVEFRTAAGEALAISLPASETRVIRHFQERMPSGLFVPD
Ga0318547_108735402	3300031781	Soil	GTYIVEFRTAAGEALAISIPRTEAAVIRHFQERMPYGLFVPDAEPR
Ga0318548_104244342	3300031793	Soil	IVEVRTAAGEALAISIPRSEASVIRHFQERMPYGLFVPDIS
Ga0318557_104521691	3300031795	Soil	AAGEALAISIPRTETAVIRHFQERMPYGLFVPDEP
Ga0318568_107648411	3300031819	Soil	TDGTYVVEFRTAAGAELAISIPRSEAAVIQHFQERMPYGLFVPDEP
Ga0318567_102315963	3300031821	Soil	IVEFRTAAGEALAITIPRTECAVIRHFQERMPYGLFVPDVP
Ga0306919_100950223	3300031879	Soil	MGVALAISIPRTEAAAIRHFRERMPYGLFVPDARLV
Ga0318544_100085411	3300031880	Soil	AEGESLAISIPRTETAVIRHFQERMPHGLFVPDVL
Ga0306925_107363981	3300031890	Soil	KDDGTYIVEFRTAAGEALAISIPRTEAAVVRHFQERMPYGLFVPDVP
Ga0318522_100638912	3300031894	Soil	FRTALGESLAISIPGNEAGVIRHFQERMPYGLFVPDVP
Ga0318551_103473141	3300031896	Soil	TYVVEFRTAAGESLAISLPASETRVIRHFQERMPSGLFVPDTP
Ga0318520_102732921	3300031897	Soil	GTYVVEFRTAEGEVLAISIPTTETAVIRHFQERMPYGLSVPDEP
Ga0306923_114253102	3300031910	Soil	LAFGAATYVIEFKTVAGEALAISIPRTEAAVIRHFQARMPYSLIVPDAD
Ga0310910_100500375	3300031946	Soil	MEFKAAAGEALAISIPRAEAPVIRYLQARMPHGLVVPDVP
Ga0310910_102619551	3300031946	Soil	TYIVEFRTAAGEALAISIPRSEASVVRYFQERMPYGLFVPDIP
Ga0310909_102621453	3300031947	Soil	TNGTYVVEFRTAQGAVLAISIPRTEAAVIRHFQERMPYGLFVPDEP
Ga0310909_107692413	3300031947	Soil	TPPVPVGEALAISIPRTEAAVIKYFQERMPHGLVVPDG
Ga0310909_112503632	3300031947	Soil	MGVALAISIPRTEAAVIRHFQERMPYGLFVPDARL
Ga0306922_101110991	3300032001	Soil	TYIVEFRTADGEALAISIPGGEARVIRHFQERMPYGLFVPDVP
Ga0306922_113976881	3300032001	Soil	TYIVEFRTAEGEVLAISIPRTETAVIRHFQKRMPYGLFVPDEPRRTA
Ga0318507_103351391	3300032025	Soil	GTYVVEFRTAAGEALAISIPRTEAAVIRHFHERMPYGLFVPDVNGV
Ga0318570_103098862	3300032054	Soil	TAAGEALAISIPRTETAVIRHFQERMPYGLFVPDEP
Ga0318533_107690902	3300032059	Soil	TAAGEALAISIPRTEAAVARHFQERMPYGLFVPDVP
Ga0318514_107844731	3300032066	Soil	VEFKTAAGEALAISIPRTETAVIRHFQERMPYGLFVPDVDAGAFGKK
Ga0306924_124031831	3300032076	Soil	TSEGDVLAISIPRTETAVIRHFQERMPYGLFVPDNAI
Ga0318518_104572111	3300032090	Soil	YVVEFRTAAGEALAISIPRTEAAVIRHFHERMPYGLFVPDVNGV
Ga0307471_1028396911	3300032180	Hardwood Forest Soil	VDFRTAEGEALAISIPRTEAAVIRHFQSKMPYGLVVPDVKPDTDR
Ga0306920_10002980513	3300032261	Soil	MTYVVEFRTAAGEALAISLPASETRVIRHFQERMPSGLFVPDTP
Ga0310914_111307652	3300033289	Soil	DDGAYIVEFRTAAGEALAISIPRSEAVVRYFQERMPYGLFVPDIS
Ga0318519_102724541	3300033290	Soil	VEFRTAQGAVLAISIPRTEAAVIRHFQERMPYGLFVPDEP
Ga0318519_103876542	3300033290	Soil	FRTAAGKALAITIPRTECAVIRHFQERMPYGLFVPDVP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F038429

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences