Metagenome / Metatranscriptome Family F038446

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F038446
Family Type	Metagenome / Metatranscriptome
Number of Sequences	166
Average Sequence Length	54 residues
Representative Sequence	MIEEAMSITPIIFVLVILLFGFDSTEQVRTQLALKDRARNLKFSEISIFERLRKK
Number of Associated Samples	125
Number of Associated Scaffolds	166

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	18.01 %
% of genes near scaffold ends (potentially truncated)	31.93 %
% of genes from short scaffolds (< 2000 bps)	86.14 %
Associated GOLD sequencing projects	111
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (94.578 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (33.735 % of family members)
Environment Ontology (ENVO)	Unclassified (40.964 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (44.578 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 56.63% β-sheet: 0.00% Coil/Unstructured: 43.37%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.33
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.33
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 166 Family Scaffolds
PF02776	TPP_enzyme_N	36.14
PF12697	Abhydrolase_6	6.63
PF13515	FUSC_2	1.81
PF04966	OprB	1.20
PF00873	ACR_tran	1.20
PF06314	ADC	1.20
PF01575	MaoC_dehydratas	0.60
PF02771	Acyl-CoA_dh_N	0.60
PF00072	Response_reg	0.60
PF07992	Pyr_redox_2	0.60
PF01568	Molydop_binding	0.60
PF00171	Aldedh	0.60
PF00903	Glyoxalase	0.60
PF02515	CoA_transf_3	0.60
PF02322	Cyt_bd_oxida_II	0.60

COG ID	Name	Functional Category	% Frequency in 166 Family Scaffolds
COG3659	Carbohydrate-selective porin OprB	Cell wall/membrane/envelope biogenesis [M]	1.20
COG4689	Acetoacetate decarboxylase	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.20
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	0.60
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	0.60
COG1294	Cytochrome bd-type quinol oxidase, subunit 2	Energy production and conversion [C]	0.60
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	0.60
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.60
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	0.60

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	94.58 %
Unclassified	root	N/A	5.42 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	94.58 %
Unclassified	root	N/A	5.42 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	94.58 %
Unclassified	root	N/A	5.42 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	47.59 %
Unclassified	root	N/A	5.42 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.60 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.60 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	47.59 %
Unclassified	root	N/A	5.42 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.60 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.60 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	22.29 %
Unclassified	root	N/A	5.42 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	1.81 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.60 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.60 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	22.29 %
Unclassified	root	N/A	5.42 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	1.81 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.60 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.60 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	22.29 %
Unclassified	root	N/A	5.42 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	1.20 %
unclassified Chthoniobacterales	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales	0.60 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.60 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.60 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	22.29 %
Unclassified	root	N/A	5.42 %
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	1.20 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	0.60 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.60 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.60 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	22.29 %
Unclassified	root	N/A	5.42 %
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1.20 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	0.60 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.60 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.60 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001686\|C688J18823_10165442	All Organisms → cellular organisms → Bacteria	1511	Open in IMG/M
3300004114\|Ga0062593_102530319	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	582	Open in IMG/M
3300004463\|Ga0063356_101113982	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1139	Open in IMG/M
3300005166\|Ga0066674_10100425	All Organisms → cellular organisms → Bacteria	1343	Open in IMG/M
3300005166\|Ga0066674_10174827	All Organisms → cellular organisms → Bacteria	1019	Open in IMG/M
3300005172\|Ga0066683_10163797	All Organisms → cellular organisms → Bacteria	1368	Open in IMG/M
3300005172\|Ga0066683_10320261	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	964	Open in IMG/M
3300005175\|Ga0066673_10081240	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1705	Open in IMG/M
3300005177\|Ga0066690_10370517	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	972	Open in IMG/M
3300005178\|Ga0066688_10673060	All Organisms → cellular organisms → Bacteria	660	Open in IMG/M
3300005180\|Ga0066685_10524489	All Organisms → cellular organisms → Bacteria	818	Open in IMG/M
3300005186\|Ga0066676_10303220	All Organisms → cellular organisms → Bacteria	1057	Open in IMG/M
3300005186\|Ga0066676_10612300	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	738	Open in IMG/M
3300005187\|Ga0066675_10639357	All Organisms → cellular organisms → Bacteria	799	Open in IMG/M
3300005187\|Ga0066675_10772296	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	725	Open in IMG/M
3300005294\|Ga0065705_10288502	All Organisms → cellular organisms → Bacteria	1084	Open in IMG/M
3300005294\|Ga0065705_10945736	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	561	Open in IMG/M
3300005434\|Ga0070709_10129237	All Organisms → cellular organisms → Bacteria	1722	Open in IMG/M
3300005436\|Ga0070713_100369449	All Organisms → cellular organisms → Bacteria	1334	Open in IMG/M
3300005436\|Ga0070713_100928682	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	838	Open in IMG/M
3300005450\|Ga0066682_10389953	All Organisms → cellular organisms → Bacteria	893	Open in IMG/M
3300005451\|Ga0066681_10322822	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	946	Open in IMG/M
3300005554\|Ga0066661_10321299	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	951	Open in IMG/M
3300005555\|Ga0066692_10722213	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300005557\|Ga0066704_10699835	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	638	Open in IMG/M
3300005560\|Ga0066670_10609965	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	664	Open in IMG/M
3300005574\|Ga0066694_10363923	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	684	Open in IMG/M
3300005576\|Ga0066708_10357762	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	937	Open in IMG/M
3300005576\|Ga0066708_10384155	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	901	Open in IMG/M
3300005614\|Ga0068856_101303069	All Organisms → cellular organisms → Bacteria	742	Open in IMG/M
3300006032\|Ga0066696_10457272	Not Available	836	Open in IMG/M
3300006046\|Ga0066652_100905406	All Organisms → cellular organisms → Bacteria	841	Open in IMG/M
3300006163\|Ga0070715_10227422	All Organisms → cellular organisms → Bacteria	963	Open in IMG/M
3300006175\|Ga0070712_100547765	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	974	Open in IMG/M
3300006791\|Ga0066653_10178863	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1061	Open in IMG/M
3300006796\|Ga0066665_10207809	All Organisms → cellular organisms → Bacteria	1524	Open in IMG/M
3300006796\|Ga0066665_10503212	All Organisms → cellular organisms → Bacteria	992	Open in IMG/M
3300006800\|Ga0066660_10510344	All Organisms → cellular organisms → Bacteria	1010	Open in IMG/M
3300006893\|Ga0073928_10002430	All Organisms → cellular organisms → Bacteria	31967	Open in IMG/M
3300007258\|Ga0099793_10412167	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	665	Open in IMG/M
3300007788\|Ga0099795_10313308	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	693	Open in IMG/M
3300009012\|Ga0066710_101326869	All Organisms → cellular organisms → Bacteria	1116	Open in IMG/M
3300009012\|Ga0066710_104331223	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	530	Open in IMG/M
3300009012\|Ga0066710_104898846	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	501	Open in IMG/M
3300009038\|Ga0099829_11665396	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	525	Open in IMG/M
3300009090\|Ga0099827_10133989	All Organisms → cellular organisms → Bacteria	2010	Open in IMG/M
3300009137\|Ga0066709_102472387	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	702	Open in IMG/M
3300009137\|Ga0066709_103286793	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300009137\|Ga0066709_104183066	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	525	Open in IMG/M
3300010159\|Ga0099796_10014720	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2268	Open in IMG/M
3300010321\|Ga0134067_10116539	All Organisms → cellular organisms → Bacteria	928	Open in IMG/M
3300010322\|Ga0134084_10007882	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2613	Open in IMG/M
3300010326\|Ga0134065_10117836	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	899	Open in IMG/M
3300010337\|Ga0134062_10221609	All Organisms → cellular organisms → Bacteria	870	Open in IMG/M
3300010337\|Ga0134062_10351553	All Organisms → cellular organisms → Bacteria	710	Open in IMG/M
3300010364\|Ga0134066_10129852	All Organisms → cellular organisms → Bacteria	768	Open in IMG/M
3300010401\|Ga0134121_10345524	Not Available	1330	Open in IMG/M
3300011269\|Ga0137392_10522262	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	986	Open in IMG/M
3300012198\|Ga0137364_10248593	All Organisms → cellular organisms → Bacteria	1313	Open in IMG/M
3300012198\|Ga0137364_10574022	All Organisms → cellular organisms → Bacteria	849	Open in IMG/M
3300012199\|Ga0137383_10846156	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	668	Open in IMG/M
3300012199\|Ga0137383_10906477	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300012200\|Ga0137382_10885469	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
3300012200\|Ga0137382_10996487	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	602	Open in IMG/M
3300012201\|Ga0137365_10429861	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	973	Open in IMG/M
3300012201\|Ga0137365_10575837	All Organisms → cellular organisms → Bacteria	826	Open in IMG/M
3300012201\|Ga0137365_11125514	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300012202\|Ga0137363_10019542	All Organisms → cellular organisms → Bacteria	4514	Open in IMG/M
3300012202\|Ga0137363_10659907	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	884	Open in IMG/M
3300012203\|Ga0137399_11771323	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	506	Open in IMG/M
3300012204\|Ga0137374_10088376	All Organisms → cellular organisms → Bacteria	2970	Open in IMG/M
3300012204\|Ga0137374_10152770	All Organisms → cellular organisms → Bacteria	2058	Open in IMG/M
3300012205\|Ga0137362_10373034	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1236	Open in IMG/M
3300012205\|Ga0137362_10709176	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	864	Open in IMG/M
3300012206\|Ga0137380_10835501	All Organisms → cellular organisms → Bacteria	794	Open in IMG/M
3300012207\|Ga0137381_11047443	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	703	Open in IMG/M
3300012208\|Ga0137376_10753972	All Organisms → cellular organisms → Bacteria	839	Open in IMG/M
3300012208\|Ga0137376_10764521	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	832	Open in IMG/M
3300012209\|Ga0137379_10946958	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	766	Open in IMG/M
3300012209\|Ga0137379_11287664	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	637	Open in IMG/M
3300012210\|Ga0137378_10154930	All Organisms → cellular organisms → Bacteria	2125	Open in IMG/M
3300012285\|Ga0137370_10058699	Not Available	2083	Open in IMG/M
3300012285\|Ga0137370_10313348	All Organisms → cellular organisms → Bacteria	939	Open in IMG/M
3300012350\|Ga0137372_10563945	All Organisms → cellular organisms → Bacteria	839	Open in IMG/M
3300012350\|Ga0137372_11185155	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300012351\|Ga0137386_10351064	All Organisms → cellular organisms → Bacteria	1061	Open in IMG/M
3300012351\|Ga0137386_10408764	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	977	Open in IMG/M
3300012351\|Ga0137386_11283252	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300012354\|Ga0137366_10397096	All Organisms → cellular organisms → Bacteria	1004	Open in IMG/M
3300012354\|Ga0137366_10548497	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	832	Open in IMG/M
3300012354\|Ga0137366_10816014	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	662	Open in IMG/M
3300012356\|Ga0137371_10295886	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1261	Open in IMG/M
3300012357\|Ga0137384_10269417	All Organisms → cellular organisms → Bacteria	1419	Open in IMG/M
3300012357\|Ga0137384_10641623	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	865	Open in IMG/M
3300012357\|Ga0137384_10833642	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	745	Open in IMG/M
3300012357\|Ga0137384_11375749	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	554	Open in IMG/M
3300012361\|Ga0137360_11534498	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300012917\|Ga0137395_11103857	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300012923\|Ga0137359_11004555	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	716	Open in IMG/M
3300012930\|Ga0137407_12333049	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	511	Open in IMG/M
3300012957\|Ga0164303_10779024	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	655	Open in IMG/M
3300012957\|Ga0164303_11047363	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	585	Open in IMG/M
3300012958\|Ga0164299_10947105	All Organisms → cellular organisms → Bacteria	629	Open in IMG/M
3300012960\|Ga0164301_10749061	All Organisms → cellular organisms → Bacteria	741	Open in IMG/M
3300012960\|Ga0164301_11300087	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	589	Open in IMG/M
3300012972\|Ga0134077_10183429	All Organisms → cellular organisms → Bacteria	847	Open in IMG/M
3300012975\|Ga0134110_10345617	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	650	Open in IMG/M
3300012985\|Ga0164308_10199360	All Organisms → cellular organisms → Bacteria	1524	Open in IMG/M
3300012986\|Ga0164304_11568573	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	547	Open in IMG/M
3300013296\|Ga0157374_10701792	All Organisms → cellular organisms → Bacteria	1025	Open in IMG/M
3300014157\|Ga0134078_10307180	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	684	Open in IMG/M
3300015242\|Ga0137412_10034241	All Organisms → cellular organisms → Bacteria	4150	Open in IMG/M
3300017657\|Ga0134074_1376761	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300017659\|Ga0134083_10323776	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300018075\|Ga0184632_10423368	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	556	Open in IMG/M
3300018433\|Ga0066667_10107516	All Organisms → cellular organisms → Bacteria	1873	Open in IMG/M
3300018468\|Ga0066662_11026420	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	818	Open in IMG/M
3300018468\|Ga0066662_11566009	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	687	Open in IMG/M
3300019789\|Ga0137408_1186457	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	3819	Open in IMG/M
3300019874\|Ga0193744_1034203	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	963	Open in IMG/M
3300019877\|Ga0193722_1000211	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	12990	Open in IMG/M
3300019879\|Ga0193723_1037021	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1457	Open in IMG/M
3300019881\|Ga0193707_1096305	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	889	Open in IMG/M
3300019881\|Ga0193707_1199179	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	512	Open in IMG/M
3300019886\|Ga0193727_1002732	All Organisms → cellular organisms → Bacteria	7400	Open in IMG/M
3300019886\|Ga0193727_1069517	All Organisms → cellular organisms → Bacteria	1091	Open in IMG/M
3300019890\|Ga0193728_1037836	All Organisms → cellular organisms → Bacteria	2381	Open in IMG/M
3300020005\|Ga0193697_1099377	All Organisms → cellular organisms → Bacteria	695	Open in IMG/M
3300020012\|Ga0193732_1035067	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	865	Open in IMG/M
3300020062\|Ga0193724_1048812	All Organisms → cellular organisms → Bacteria	896	Open in IMG/M
3300020170\|Ga0179594_10194044	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	760	Open in IMG/M
3300021178\|Ga0210408_10506834	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	959	Open in IMG/M
3300021344\|Ga0193719_10217791	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	812	Open in IMG/M
3300022557\|Ga0212123_10002004	All Organisms → cellular organisms → Bacteria	51788	Open in IMG/M
3300025898\|Ga0207692_11000243	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300025905\|Ga0207685_10062784	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1477	Open in IMG/M
3300025906\|Ga0207699_10588687	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	809	Open in IMG/M
3300025915\|Ga0207693_10270864	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1330	Open in IMG/M
3300025926\|Ga0207659_11170845	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	661	Open in IMG/M
3300025936\|Ga0207670_11273871	Not Available	623	Open in IMG/M
3300025972\|Ga0207668_10502354	All Organisms → cellular organisms → Bacteria	1043	Open in IMG/M
3300026300\|Ga0209027_1037430	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1830	Open in IMG/M
3300026306\|Ga0209468_1078277	All Organisms → cellular organisms → Bacteria	1105	Open in IMG/M
3300026314\|Ga0209268_1032371	All Organisms → cellular organisms → Bacteria	1781	Open in IMG/M
3300026317\|Ga0209154_1091536	All Organisms → cellular organisms → Bacteria	1302	Open in IMG/M
3300026324\|Ga0209470_1092379	All Organisms → cellular organisms → Bacteria	1369	Open in IMG/M
3300026329\|Ga0209375_1147280	All Organisms → cellular organisms → Bacteria	997	Open in IMG/M
3300026335\|Ga0209804_1125172	All Organisms → cellular organisms → Bacteria	1165	Open in IMG/M
3300026538\|Ga0209056_10147904	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1805	Open in IMG/M
3300026551\|Ga0209648_10059866	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3233	Open in IMG/M
3300026552\|Ga0209577_10080077	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2688	Open in IMG/M
3300027512\|Ga0209179_1015232	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1425	Open in IMG/M
3300027821\|Ga0209811_10010069	All Organisms → cellular organisms → Bacteria	3033	Open in IMG/M
3300027882\|Ga0209590_10082592	All Organisms → cellular organisms → Bacteria	1880	Open in IMG/M
3300028536\|Ga0137415_10505165	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1017	Open in IMG/M
3300028708\|Ga0307295_10145202	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	657	Open in IMG/M
3300030847\|Ga0075405_11919075	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	772	Open in IMG/M
3300031057\|Ga0170834_101103942	All Organisms → cellular organisms → Bacteria	1135	Open in IMG/M
3300031446\|Ga0170820_12183999	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300031474\|Ga0170818_113004638	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300031962\|Ga0307479_11159895	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	737	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.99%
Host-Associated	Host-Associated	3.01%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	95.18%
Plants	Host-Associated → Plants	3.01%
Aquatic	Environmental → Aquatic	1.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	95.18%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.81%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.20%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.20%
Sediment	Environmental → Aquatic → Sediment	0.60%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	87.35%
Loam	Environmental → Terrestrial → Soil → Loam	7.83%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.20%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.20%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.20%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.60%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	55.42%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	27.11%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.63%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.22%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.20%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.20%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.20%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.20%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.60%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.60%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	33.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	20.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	12.65%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	6.63%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	6.63%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.02%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.41%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.20%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.20%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.20%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.60%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.60%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.60%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.60%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.60%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.60%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.60%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.60%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.60%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.60%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300019874	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1a1	Environmental	Open in IMG/M
3300019877	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1	Environmental	Open in IMG/M
3300019879	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2	Environmental	Open in IMG/M
3300019881	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2	Environmental	Open in IMG/M
3300019886	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300020005	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m2	Environmental	Open in IMG/M
3300020012	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s1	Environmental	Open in IMG/M
3300020062	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a1	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300026314	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027512	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300030847	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA10 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J18823_101654422	3300001686	Soil	MSITLIVFVLVILLFGFDSAGQVRTQLAQKDRARNLKFSEISIFGRLRKK*
Ga0062593_1025303192	3300004114	Soil	DFLSMTEEAMGITPIVFVLIILLFGFDSTEQVRTQLALKNRARNLKFSEISIFERLRKK*
Ga0063356_1011139822	3300004463	Arabidopsis Thaliana Rhizosphere	MTEEAMGITPIVFVLIILLFGFDSTEQVRTQLALKNRARNLKFSEISIFERLRKK*
Ga0066674_101004252	3300005166	Soil	MIEEAMSITPIIFVLVILLFGFDSTGQVRTQLALKDRARNLKFSKISIFESLRKK*
Ga0066674_101748271	3300005166	Soil	MIEEGMSLTPIIFVLVILLFGFDSTEQVRTQLALKDRARNLKFSEISIFGRLRKK*
Ga0066683_101637972	3300005172	Soil	MTEQAMSITPIIFVLVILLFGFDSTGQVRTQLALKDRARNLKFSKISIFESLRKK*
Ga0066683_103202612	3300005172	Soil	MIEEAMSTTPIVFILIILLFGFDWPGQVRTQLALKDRARNLKFSEISIFGRLRKK*
Ga0066673_100812402	3300005175	Soil	MMEQAMSITPIIFVLVILLFGFDSTGQVRTQLALKDRARNLKFSKISIFESLRKK*
Ga0066690_103705172	3300005177	Soil	MSITPIVFVLIILLFGFDSTEQVRTQLALKDRARNLKFSEISIFGRLRKK*
Ga0066688_106730601	3300005178	Soil	RHAGRGDFLSMMEQAMSITPIIFVLVILLFGFDSTGQVRTQLALKDRARNLKFSKISIFESLRKK*
Ga0066685_105244892	3300005180	Soil	MSITPIIFVLVILLFGFDSTGQVRTQLALKDRARNLKFSKISIFESLRKK*
Ga0066676_103032202	3300005186	Soil	MSLTPIIFVLVILLFGFDSTEQVRTQLALKDRARNLKFSEISIFGRLRKK*
Ga0066676_106123001	3300005186	Soil	MSLTPIIFVLVILLFGFDSTEQVRTQLALKDRARNLKFSEISIFERLRKK*
Ga0066675_106393572	3300005187	Soil	MMEQAMSITPIIFVLVILLFGFDSTGQVRTQLALKDRARNLKFSKISIFESLR
Ga0066675_107722961	3300005187	Soil	MIEDAMSITPIIFLLVILLFGFDSTEQVRTQLALKDRARNLKFSEISIFGRLRKK*
Ga0065705_102885022	3300005294	Switchgrass Rhizosphere	MIEEGMSLIPIIFVLVILLFGFDSTEQVRTPLALKNRARTLKFSEISIFGRLRKK*
Ga0065705_109457361	3300005294	Switchgrass Rhizosphere	MIEGAMSITPIIFVLIILLFGFDSTGQVRTQLALKDRARNLNFSEISIFGRLRKK*
Ga0070709_101292371	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MIEEAMSITPIIFVLVILLFGFDSTEQVRTQLALKDRARNLKFSEISIFGRLRKK*
Ga0070713_1003694492	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MIEEAMSITPIIFVLVILLFGFDSTEQVRTQLALKDRARNLKFSEISIFGRLRKKW*
Ga0070713_1009286822	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MIDEAMSITPIVFVLIILLFGFDSTEQARRQLALKDRARNLKFSEMSIFESLRKK*
Ga0066682_103899531	3300005450	Soil	TMSITPIIFVLVILLFGFDSTGQVRTQLALKDRARNLKFSKISIFESLRKK*
Ga0066681_103228222	3300005451	Soil	MIEEAMSTTPIVFILIILLFGFDSTGQVRTQLALKDRARNLKFSEISIFERLRKK*
Ga0070693_1010501681	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MIEEAMSITLIIFLLVILLFGFDSTEQVRTQLALKDRARNLK
Ga0066661_103212992	3300005554	Soil	MIEEAMSITPIVFFLIILLFGFDSTGQVRTQLALKDRARNLKFSEISIFERLRKK*
Ga0066692_107222131	3300005555	Soil	MSLTPIIFVLVILLFGFDSTEQVRTQLALKDRARNFKFVEISIFGRLRKK*
Ga0066704_106998352	3300005557	Soil	FLSMIEEAMSTTPIVFILIILLFGFDSTGQVRTQLALKDRARNLKFSEISIFERLRKK*
Ga0066670_106099652	3300005560	Soil	MIGEAMSITSIIFVLIILLFGFDSTGQIRTQLALKDRTGNLNFSEISIFARLRKK*
Ga0066694_103639232	3300005574	Soil	MIEEAMSTTPIVFILIILLFGFDSTEQVRTQLALKDRARNLKFSEISIFGRLRKK*
Ga0066708_103577621	3300005576	Soil	MIDEAMSITPIVFVLIILLFGFDSTEQVRTQLALKDRARNLKFSKISIFESLR
Ga0066708_103841552	3300005576	Soil	MSLTPIIFVLVILLFGFDSTEQARTQLALKDRARNFKFVEISIFGRLRKT*
Ga0068856_1013030692	3300005614	Corn Rhizosphere	MIDEAMSITPIVFVLIILLFGFDSTEQARRQLALKDRARNLKFS
Ga0066696_104572722	3300006032	Soil	MMEQAMSITPIIFVLVILLFGFDSRGQVRTQLALKDRARNLKFSKISIFENLRRK*
Ga0066652_1009054062	3300006046	Soil	MIEDAMITTPIVFVLVILLFGFDSTGQVRTQLALKDRARNLKFSKISIFESLRKK*
Ga0070715_102274222	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MIEEAMSITPIIFVLIILLFGFDSTEQARTRLALKDLARNLKFSEMSIFESLRKK*
Ga0070712_1005477652	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MIEEAMSITPIIFVLIILLFGFDSTGQVRTQLALKDRARNLNFSEISIFGRLRKK*
Ga0066653_101788632	3300006791	Soil	MSITPIIFVLVILLFGFDSTGQVRTQLALKDRARNLKFSKISIFESLRK
Ga0066665_102078092	3300006796	Soil	MIEEGMSLTPIIFVLVILLFGFDSTEQVRTQLALKDRARNFKFVEISIFGRLRKK*
Ga0066665_105032122	3300006796	Soil	MIEEAMSITPIIFVLVILLFGFDSTEQVRTQLALKDRARNLKFSEISIFERLRKK*
Ga0066660_105103442	3300006800	Soil	MIEKAMSTTSIVFILIILLFGFDSTGQVRTQLALKDRARNLKFSEISIFERLRKK*
Ga0073928_1000243013	3300006893	Iron-Sulfur Acid Spring	MIEEAMSLTPIIFVLVILLFGFDSTEQVRTQLALKVRARNLKFSEISIFGRLRKK*
Ga0099793_104121671	3300007258	Vadose Zone Soil	MNVTTIVLILIILLFGFDSTGQVRTQLALKDRARNLKFSEISIFERLRKK*
Ga0099795_103133082	3300007788	Vadose Zone Soil	MIEKAMSTTPIVFILIILLFGFDSTEQVRTQLALKDRARNLKFSEISIFERLRKK*
Ga0066710_1013268693	3300009012	Grasslands Soil	MSTTPIIFILIILLFGFDSTGQVRTQLALKDRARNLKFSEISIFERLRK
Ga0066710_1043312232	3300009012	Grasslands Soil	MIEEGMSLTPIIFVLVILLFGFDSTEQVRTQLALKDRARNFKFVEISIFGRLRKK
Ga0066710_1048988461	3300009012	Grasslands Soil	MIEDAMSATLIVFVLVILLFGFDSTEEVRTQLALKDRARNLKFSEISIFERLRKK
Ga0099829_116653962	3300009038	Vadose Zone Soil	MIEEAMSITPIIFVLVILLFAFDSTGQVRTQLALKDRARNLKFSEISIFERLRKK*
Ga0099827_101339892	3300009090	Vadose Zone Soil	MIEEGMSLTPIIFVLVILLFGFDSTEQVRTQLALKDRARNLHFFEISIFGRLRKE*
Ga0066709_1024723872	3300009137	Grasslands Soil	MIEDAMSLTPIIFVLVILLFGFDSTEQVRTQLALKDRARNLKFSEISIFGRL
Ga0066709_1032867931	3300009137	Grasslands Soil	MIEDAMSATLIVFVLVILLFGFDSTEQVRTQPALKDRARNLKFSEISIFGRLRKK*
Ga0066709_1041830661	3300009137	Grasslands Soil	MSTTPIIFILIILLFGFDSTGQVRTQLALKDRARNLKFSEISIFERL
Ga0099796_100147203	3300010159	Vadose Zone Soil	MIEKAMSTTPIVFILIILLFCFDSTGPVRTQLALKDRARNLKFSEISIFERLRKK*
Ga0134067_101165392	3300010321	Grasslands Soil	ETMSITLIIFVLIILLFGFDSTEQVRTQLALKDRARNLKFSEISIFGRLRKK*
Ga0134084_100078824	3300010322	Grasslands Soil	MIEETMSTTPIVFILIILLFGFDSTGQVRTQLALKDRARNLKFSEISIFGRLRKK*
Ga0134065_101178362	3300010326	Grasslands Soil	MIEDAMSATLIVFILIILLFGFDSTGQVRTQLALKDRARNLKFSKISIFERLRKK*
Ga0134062_102216092	3300010337	Grasslands Soil	MIEEAMSTTPIVFILIILLFGVDSTEQVRTQLALKDRARNLKFSKISIFESLRKK*
Ga0134062_103515531	3300010337	Grasslands Soil	EDAMITTPIVFVLVILLFGFDSTGQVRTQLALKDRARNLKFSKISIFERLRKK*
Ga0134066_101298522	3300010364	Grasslands Soil	MIEEAMSTMTIIFVLLILLFGFDSTEQVRTQLALKDRARNLKFSEISIFGRLRKK*
Ga0134121_103455241	3300010401	Terrestrial Soil	ARFPRRGDFLSLTEAAMSITLTICVLVILLFGFDSAGQVRTQLALKDRARNLKFSKVPIVPATEVN*
Ga0137392_105222621	3300011269	Vadose Zone Soil	EEGMSLTPIIFVLVILLFGFDSTEQVRTQLALKDRARNLKFSEISIFERLRKK*
Ga0137364_102485933	3300012198	Vadose Zone Soil	MIEDAMSTTPIVFILIILLFGFDSTEQVRTQLALKDRARNLKFSEISIFERLRKK*
Ga0137364_105740222	3300012198	Vadose Zone Soil	MIEEAMSLTPIIFVLVILLFGFDSTEQVRTQLALKDRARNLKFSEMSIFGRLRKK*
Ga0137383_108461561	3300012199	Vadose Zone Soil	MIEEGMSVTPIIFVLVILLFGFDSTEQIRTQLALKDRARNLKFSEISIFGRLRKK*
Ga0137383_109064772	3300012199	Vadose Zone Soil	MMEQAMSITPIIFVLVILLFGFDSTGQVRTQLALKDRARNLKLSKISIFESLRKK*
Ga0137382_108854692	3300012200	Vadose Zone Soil	FLSMIEEAMSITPIIFVLVILLFGFDSTGQVRMQLALKDRARNLKFSKISIVEKLRKK*
Ga0137382_109964872	3300012200	Vadose Zone Soil	MIEEAMSITSIIFVLVILLFGFDSTGQVRTQLALKDRARNLKFSEISIFERLRKK*
Ga0137382_110361171	3300012200	Vadose Zone Soil	MSITPIIFVLVILLFGFDSTEQIRTQLALKDRARNLKFFEI
Ga0137365_104298612	3300012201	Vadose Zone Soil	MIEDAMSATLIVFVLVILLFGFDSTEQVRTQLALKDRARNLKFSEISIFERLRKK*
Ga0137365_105758371	3300012201	Vadose Zone Soil	TPIIFVLVILLFGFDSTEQVRTQLALKDRARNLKFSEISIFARLRKK*
Ga0137365_111255141	3300012201	Vadose Zone Soil	HAGRGDFLSMMEQAMSITPIIFVLVILLFGFDSTGQVRTQLALKDRARNLKFSKISIFESLRKK*
Ga0137363_100195423	3300012202	Vadose Zone Soil	MIDEAMSITPIVFVLIILLFGFDSTEQVRTQLALKDRARNLKFSEISIFGRLRKK*
Ga0137363_101653913	3300012202	Vadose Zone Soil	MIEDAMSATLIVFVLVILLFGFDSTEQVRTQLALKDRARNLKF
Ga0137363_106599072	3300012202	Vadose Zone Soil	MIEEGMSLTPIIFVLVILLFGFDSTEQVRTQLALKDRARNLNFSEIPIFGRLRKK*
Ga0137399_117713231	3300012203	Vadose Zone Soil	MIEDAMSTTPILFILIILLFGFDSTGQVRTKLGLKDRARNLKFSEISIFERLRKK*
Ga0137374_100883762	3300012204	Vadose Zone Soil	MIEEAMSTTPIVFVLIILLFGFDSAGQVGTQLALKDRARNLKFSEISIFERLRKK*
Ga0137374_101527702	3300012204	Vadose Zone Soil	MIEEAMSTTPIVFVLIILLFGFDSTGKVRTQLALKDRARNLNFSKISIFEGLRKK*
Ga0137362_103730342	3300012205	Vadose Zone Soil	MMEQAMSITPIIFVLVILLFGFDSTGQVRTQLALKDRARNLKFSKISI
Ga0137362_107091761	3300012205	Vadose Zone Soil	MIEGAMSLTPIIFVLLILLFGFDSTGQVKTQLALKDRTRNLNFSEISIFGRLRKK*
Ga0137380_108355012	3300012206	Vadose Zone Soil	MSLTPIIFVLVILLFGFDSTEQVRTQLALKDRARNLKFVEISIFGRLRKK*
Ga0137381_110474432	3300012207	Vadose Zone Soil	MTEEALSARLIVFVLVILLFGFDSTEQVRTQLALKDRARNLKFSEISIFERLRKK*
Ga0137376_107539722	3300012208	Vadose Zone Soil	MIEKTMSTTPILFILIILLFGFDSTEQVKTQLGLKDRARNLKFSEISIFERLRKK*
Ga0137376_107645212	3300012208	Vadose Zone Soil	DFLSMIEDAMSTTPIVFILIILLFGFDSTEQVRTQLALKDRARNLKFSEISIFERLRKK*
Ga0137379_109469582	3300012209	Vadose Zone Soil	MIEEAMSITPIILVLVILLFGFDSTGQVRTQLALKDRARNLKFSKISIF
Ga0137379_112876643	3300012209	Vadose Zone Soil	MIEEAMSTTPIVFILIILLFGFDSTGQVRTQLALKDRARNLKFSKISVFERLRKK*
Ga0137378_101549302	3300012210	Vadose Zone Soil	MMEQAMSITPIIFVLVILLFGFDSTEQVRTQLALKDRARNFKFVEISIFGRLRKK*
Ga0137370_100586992	3300012285	Vadose Zone Soil	MIEEIMSTTPIVFILIILLFGFDSAGHVRTQLALKDRARNLKFSKVPIVPATEVN*
Ga0137370_103133482	3300012285	Vadose Zone Soil	MIEDAMSTTPIVFILIILLFGFDSTEQVRTQLALKDRARNLKFSEI
Ga0137372_105639453	3300012350	Vadose Zone Soil	MIEDAMSTTPIVFVLVILLFGFDSTGQVRTQLALKDRARNLKFSKISIVEK
Ga0137372_111851552	3300012350	Vadose Zone Soil	VFVLVILLFGFDSTGQVRTQLALKDRARNLKFSKISIVEKLRKK*
Ga0137386_103510641	3300012351	Vadose Zone Soil	MIEEAMSTTPIVFILIILLFGFDSTEQVRTQLALKDRARNLKFS
Ga0137386_104087642	3300012351	Vadose Zone Soil	LSLTEEGMSLTPIIFVLVILLFGFDSTEQVRTQLALKDRARNFKFVEISIFERLRKK*
Ga0137386_112832521	3300012351	Vadose Zone Soil	MIEEATSITPIIFVLLILLFGFDSTGQVRTQLALKDRARNFKFSKI
Ga0137366_103970962	3300012354	Vadose Zone Soil	MIEDAMSTTPIVFVLVILLFGFDSTGQVRTQLALKDRARNLKFSKISIVEKLRKK*
Ga0137366_105484972	3300012354	Vadose Zone Soil	MMEQAMSTTPIVFFLIILLFGFDSTGQVRTQLALKNRVRNLKFSEISIFERLRKK*
Ga0137366_108160141	3300012354	Vadose Zone Soil	MMEQAMSITPIIFVLVILLFGFDSTGQVRTQLAQKDRARNLKFSKISIFESLRKK*
Ga0137371_102958863	3300012356	Vadose Zone Soil	MIEETMSITPIIFVLVILLFGFDSTGQVRTQLALKDRARNLKFSKISIFES
Ga0137384_102694171	3300012357	Vadose Zone Soil	LSLTEEAMSATLIVFVLVILLFGFDSTAQVRTQLALKDRARNLKFSEISIFERLRKK*
Ga0137384_106416232	3300012357	Vadose Zone Soil	LSLTEEGMSLTPIIFVLVILLFGFDSTEQVWTQLALKDRARNLHFFEISIFGSLRKK*
Ga0137384_108336422	3300012357	Vadose Zone Soil	MIEDAMSATLIVFVLVILLFGFDSTEQVRTQLALKDRARNLKFSEISIFERLR
Ga0137384_113757493	3300012357	Vadose Zone Soil	MSITPIIFVLVILLFGFDSTEQIRTQLALKDRARNFKFSEISIFGRLRKK*
Ga0137360_115344981	3300012361	Vadose Zone Soil	SMIEETMSTMTIVFVLIILLFGFDSTGQVRTQLALKDRARNLKFSEISIFERLRKK*
Ga0137395_111038571	3300012917	Vadose Zone Soil	DFLSMIEEGMSLTPIIFVLVILLFGFDSTEQVRTQLALKDRARNLHFFEISIFGRLRKE*
Ga0137359_110045553	3300012923	Vadose Zone Soil	MSLTPIIFVLVILLFGFDSTEQVRTQLALKDRARNFKFVEISIFGRLRK
Ga0137407_123330491	3300012930	Vadose Zone Soil	MIEETMSTMTIIFVLVILLFGFDSAGQVGTQLALKDRSRNLKFSEISIFESLRK
Ga0164303_107790241	3300012957	Soil	MIEEAMSITPIIFVLIILLFGFDSTEQVGTQLALKDRARNLNFSEISIFGRLRKK*
Ga0164303_110473632	3300012957	Soil	MIEEAMSMTPIIFVLIILRFGFDSTGQVRTHLALTDRARNLNFSEISIFGRLRKK*
Ga0164299_109471052	3300012958	Soil	TEPAMSITLTICVLVILLFGFDSAGQVRTQLALKDRARNLKFSKVPIVPATEVN*
Ga0164299_115358181	3300012958	Soil	LSLTEQAMSMTPIIFVLLILLFGFDSTGQVRTQLALKYRARTLK
Ga0164301_107490611	3300012960	Soil	MIEEAMSITPIIFVLLILLFGFDSTEQVRTQLALKDRARNLKFSEISIFGRLRKKW*
Ga0164301_113000871	3300012960	Soil	MSITPIIFVLIILLFGFDSTEQARTRLALKDLARNLKFSEMSI
Ga0134077_101834292	3300012972	Grasslands Soil	GRGDFLSMMEQAMSITPIIFVLVILLFGFDSTGQVRTQLALKDRARNLKFSEISIFGRLRKK*
Ga0134110_103456171	3300012975	Grasslands Soil	PMIEKAMSTTSIVFILIILLFGFDSTGQVRTQLALKDRARNLKFSEISIFERLRKK*
Ga0164308_101993604	3300012985	Soil	MIDGAMSITPIVFVLIILLFGFDSTEQARRQLALKDRARNLKFSEMSIFESLRKE*
Ga0164304_115685732	3300012986	Soil	MIEKAMSLIPIIFFLVILLFGFDSTGQVRAQLALKDRARTLKFSEISIFGRLRKK*
Ga0157374_107017922	3300013296	Miscanthus Rhizosphere	LSLTEAAMSITLTICVLVILLFGFDSAGQVRTQLALKDRARNLKFSKVPIVPATEVN*
Ga0134078_103071802	3300014157	Grasslands Soil	MIEETMSITPIIFVLIILLFGFDSTGQIRTQLALKDRTGNLNFSEISIFARLRKK*
Ga0137412_100342413	3300015242	Vadose Zone Soil	MIEEGMSLTPIIFVLVILLFGFDSTEQVRTQLALKDRARNLNFSEIWMFGRLRKK*
Ga0134074_13767612	3300017657	Grasslands Soil	MSITPIIFVLVILLFGFDSTGQVRTQLALKDRARNLKFSEISIFGRLRKK
Ga0134083_103237761	3300017659	Grasslands Soil	MMEQPMSITPIIFVLVILLFGFDSTGQVRTQLALKDRARNLKSSKISIFESLRKK
Ga0184632_104233682	3300018075	Groundwater Sediment	EQAMSITPIIFVLVILLFGFDSTGQVRTQLALKDRARNLKFSEILVFERLRKK
Ga0066667_101075162	3300018433	Grasslands Soil	MMEQAMSITPIIFVLVILLFGFDSTGQVRTQLALKDRARNLKFSKISIFESLRKK
Ga0066662_110264201	3300018468	Grasslands Soil	MIEEAMSTTPIVFILIILLFGFDWPGQVRTQLALKDRARNLKFS
Ga0066662_115660092	3300018468	Grasslands Soil	MIEEAMSTTPIVFILIILLFGFDWPGQVRTQLALKDRARNLKFSEISIFGRLRKK
Ga0137408_11864575	3300019789	Vadose Zone Soil	MIEEGMSLTPIIFVLVILLFGFDSTEQVRTQLALKDRARNLKFSEISIFGRLRKK
Ga0193744_10342032	3300019874	Soil	MIDEAMSITPIVFVLIILLFGFDSTEQARTQLALKDRARNLKFPEMSIFESLRKK
Ga0193722_10002113	3300019877	Soil	MIEDAMSTTLIVFVLIILLFGFDSTGQVRTQLALKDRARNLKFSEISIFERLRKK
Ga0193723_10370212	3300019879	Soil	MIEDTMSTTLIVFVLIILLFGFDSTGQVRTQLALKDRPRNLNFSKISIFERLRKK
Ga0193707_10963052	3300019881	Soil	MIEDAMSTTLIVFVLIILLFGFDSTGQVRTQLALKDRARNLRFSEISIFGRLRKK
Ga0193707_11991791	3300019881	Soil	MSTMTIIFVLIILLFGFDSTGQARTQLALKDRARNLKFSEI
Ga0193727_10027323	3300019886	Soil	LSLIEEAMSITPIIFVLVILLFGFDSTGQVRTQLALKYRARPLKFSKISIFESLRKK
Ga0193727_10695172	3300019886	Soil	MIEEAMSITPIIFVLIILLFGFDSTGQVRTQLALKDRAKNLNFSEISIFGRLRKK
Ga0193728_10378365	3300019890	Soil	MIEEAMSTMTIIFVLIILLFGFDSTGQARTQLALKDRARNLKFSEISIFGRLRKR
Ga0193697_10993772	3300020005	Soil	MIEDAMSTTLIVFVLIILLFGFDSTGQVRTQLALKDRARNLKFSEIS
Ga0193732_10350672	3300020012	Soil	MIEEIMSTTPIVLILIILLFGFDSTGSGQTQLALKDRARNLKFSEISIFERLRKK
Ga0193724_10488121	3300020062	Soil	ITPIIFVLVILLFGFDSTGQVRTQLALKYRARPLKFSKISIFESLRKK
Ga0179594_101940442	3300020170	Vadose Zone Soil	MIEDAMSATLIVFVLVILLFGFDSTEQVRTQLALKDRARNLKFSEISIFERLRKK
Ga0210408_105068343	3300021178	Soil	MSTTPIVFVLVILLFGFDSTAQIRTQRALKIAQENLKFSKISIFESLAWTNMKA
Ga0193719_102177911	3300021344	Soil	MIEEIMSTTPIVFILIILLFGFDSAGHVRTQLALKDRARNLKFSKVPIVPATEVN
Ga0212123_1000200416	3300022557	Iron-Sulfur Acid Spring	MIEEAMSLTPIIFVLVILLFGFDSTEQVRTQLALKVRARNLKFSEISIFGRLRKK
Ga0207692_110002432	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	SDFLSMIEEAMSITPIIFVLVILLFGFDSTEQVRTQLALKDRARNLKFSEISIFGRLRKK
Ga0207685_100627843	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MIGEGMSITPIIFALIILLFGFDSTGQVRTQLAVKDRARNLNFSEISIFGRLRKK
Ga0207699_105886872	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MIEEAMSITPIIFVLIILLFGFDSTEQARTRLALKDLARNLKFSEMSIFESLRKK
Ga0207693_102708644	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MIEEAMSITPIIFVLIILLFGFDSTGQVRTQLALKDRARNLNFSEISIFGRLRKK
Ga0207659_111708452	3300025926	Miscanthus Rhizosphere	MIEEGMTLIPIIFVLVILLFGFDSTEQVRTPLALKDRARTLKFSEISIF
Ga0207670_112738711	3300025936	Switchgrass Rhizosphere	MITILIIYALTILLFGFDSTGQVRTQLALKDRARNLNFSEISIFGRLRKK
Ga0207668_105023541	3300025972	Switchgrass Rhizosphere	LSMIEEGMSLIPIIFVLVILLFGFDSTEQVRTPLALKDRARTLKFSEISIF
Ga0209027_10374302	3300026300	Grasslands Soil	MIEEAMSTTPIVFILIILLFGFDSTGQVRTQLALKDRARNLKFSEMSIFESLRKR
Ga0209468_10782771	3300026306	Soil	MTEQAMSITPIIFVLVILLFGFDSTGQVRTQLALKDRARNFKFSKISIFESLRKK
Ga0209268_10323712	3300026314	Soil	MIEEAMSTTPIVFILIILLFGFDSTEQVRTQLALKDRARNLKFSKISIFESLRKK
Ga0209154_10915361	3300026317	Soil	MIEEAMSTTPIVFILIILLFGFDWPGQVRTQLALKDRARNLKFSEISIF
Ga0209470_10923791	3300026324	Soil	TPIIFVLVILLFGFDSTGQVRTQLALKDRARNLKSSKISIFESLRKK
Ga0209375_11472802	3300026329	Soil	MTEQAMSITPIIFVLVILLFGFDSTGQVRTQLALKDRARNLKFSKISIFESLRKK
Ga0209804_11251722	3300026335	Soil	MSLTPIIFVLVILLFGFDSTEQVRTQLALKDRARNFKFVEISIFGRLRKK
Ga0209056_101479042	3300026538	Soil	MIEEAMSITPIIFVLVILLFGFDSTEQVRTQLALKDRARNLKFSEISIFERLRKK
Ga0209648_100598664	3300026551	Grasslands Soil	MIDEAMSITPIVFVLIILLFGFDSTEQVRTQLALKDRARNLKFSEISIFGCLRKK
Ga0209577_100800775	3300026552	Soil	MIEEAMSTTPIVFILIILLFGFDSTGQVRTQLALKDRARNLKFSEISIFERLRKK
Ga0209179_10152323	3300027512	Vadose Zone Soil	MIEDAMSTTPIVFILIILLFGFDSTEQVRTQLALKDRARNLKFSEISIFERLRKK
Ga0209811_100100692	3300027821	Surface Soil	MIEEAMSITPIIFVLIILLFGFDSTEQVGTQLALKDRARNLNFSEISIFERLRKK
Ga0209590_100825922	3300027882	Vadose Zone Soil	MIEEGMSLTPIIFVLVILLFGFDSTEQVRTQLALKDRARNLHFFEISIFGRLRKE
Ga0137415_105051652	3300028536	Vadose Zone Soil	MIEDAMSTTPIVFILIILLFGFDSTGQVRTQLALKDRARNLKFSEISIFERLRKK
Ga0307295_101452021	3300028708	Soil	IEETMSTMTIVFILIILLFGFDSTGQVRTQLALKDRAKNLNFSEISIFGRLRKK
Ga0075405_119190751	3300030847	Soil	MIEEGMSLTPIIFVLVILLFGFDSTEQVGTQLALKDRARNLKFLKSRSSDA
Ga0170834_1011039422	3300031057	Forest Soil	RLPRRGDFLSMIEEAMSITPIIFVLVILLFGFDSTEQVRTQLALKDRARNLKFSEISIFGRLRKK
Ga0170820_121821212	3300031446	Forest Soil	IEEGMSLTPIIFVLVILLFGFDSTEQVGTQLALKDRARNLKFLKSRSSDA
Ga0170820_121839991	3300031446	Forest Soil	IEEGMSLTPIIFVLVILLFGFDSTEQVRTQLALKDRARNLKFSEISIFGRLRKK
Ga0170818_1130046381	3300031474	Forest Soil	PIIFVLVILLFGFDSTEQVGTQLALKDRARNLKFSEISIFGRLRKK
Ga0307479_111598952	3300031962	Hardwood Forest Soil	MIDEAMSITPIVFVLIILLFGFDSTGQARRQLALKDRARNLKFSEMSIFESLRKK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F038446

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences