Metagenome / Metatranscriptome Family F038774

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F038774
Family Type	Metagenome / Metatranscriptome
Number of Sequences	165
Average Sequence Length	69 residues
Representative Sequence	MKRYLIAGVLVFAFVSPALAEQFYVAFDPASHKCTMMHSQPAAPMKSMGGPFKTEAEAHKAMASMKECEG
Number of Associated Samples	134
Number of Associated Scaffolds	165

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	75.76 %
% of genes near scaffold ends (potentially truncated)	32.73 %
% of genes from short scaffolds (< 2000 bps)	87.88 %
Associated GOLD sequencing projects	125
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.30

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (58.788 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (16.970 % of family members)
Environment Ontology (ENVO)	Unclassified (21.212 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (34.545 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 35.71% β-sheet: 0.00% Coil/Unstructured: 64.29%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.30
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.30
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 165 Family Scaffolds
PF10431	ClpB_D2-small	5.45
PF01921	tRNA-synt_1f	3.64
PF01734	Patatin	2.42
PF01661	Macro	2.42
PF05099	TerB	2.42
PF05532	CsbD	1.82
PF07969	Amidohydro_3	1.21
PF14534	DUF4440	1.21
PF03413	PepSY	1.21
PF00171	Aldedh	1.21
PF04120	Iron_permease	0.61
PF00353	HemolysinCabind	0.61
PF07509	DUF1523	0.61
PF00440	TetR_N	0.61
PF02978	SRP_SPB	0.61
PF07536	HWE_HK	0.61
PF02843	GARS_C	0.61
PF08924	DUF1906	0.61
PF13406	SLT_2	0.61
PF13454	NAD_binding_9	0.61
PF02678	Pirin	0.61
PF04116	FA_hydroxylase	0.61
PF13442	Cytochrome_CBB3	0.61
PF03988	DUF347	0.61
PF01068	DNA_ligase_A_M	0.61
PF11953	DUF3470	0.61
PF11755	DUF3311	0.61
PF06803	DUF1232	0.61

COG ID	Name	Functional Category	% Frequency in 165 Family Scaffolds
COG1384	Lysyl-tRNA synthetase, class I	Translation, ribosomal structure and biogenesis [J]	3.64
COG1752	Predicted acylesterase/phospholipase RssA, containd patatin domain	General function prediction only [R]	2.42
COG2110	O-acetyl-ADP-ribose deacetylase (regulator of RNase III), contains Macro domain	Translation, ribosomal structure and biogenesis [J]	2.42
COG3621	Patatin-like phospholipase/acyl hydrolase, includes sporulation protein CotR	General function prediction only [R]	2.42
COG3793	Tellurite resistance protein TerB	Inorganic ion transport and metabolism [P]	2.42
COG4667	Predicted phospholipase, patatin/cPLA2 family	Lipid transport and metabolism [I]	2.42
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	1.82
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	1.21
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	1.21
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	1.21
COG0151	Phosphoribosylamine-glycine ligase	Nucleotide transport and metabolism [F]	0.61
COG0541	Signal recognition particle GTPase	Intracellular trafficking, secretion, and vesicular transport [U]	0.61
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	0.61
COG1741	Redox-sensitive bicupin YhaK, pirin superfamily	General function prediction only [R]	0.61
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.61
COG3000	Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily	Lipid transport and metabolism [I]	0.61
COG3339	Uncharacterized membrane protein YkvA, DUF1232 family	Function unknown [S]	0.61
COG3920	Two-component sensor histidine kinase, HisKA and HATPase domains	Signal transduction mechanisms [T]	0.61
COG4251	Bacteriophytochrome (light-regulated signal transduction histidine kinase)	Signal transduction mechanisms [T]	0.61
COG4705	Uncharacterized membrane-anchored protein	Function unknown [S]	0.61

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.79 %
All Organisms	root	All Organisms	41.21 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.79 %
cellular organisms	root	All Organisms → cellular organisms	41.21 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.79 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	41.21 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.79 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	33.33 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.61 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.79 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	22.42 %
Hydrogenophilalia	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Hydrogenophilalia	0.61 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.61 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.61 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.79 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	19.39 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.61 %
Hydrogenophilales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Hydrogenophilalia → Hydrogenophilales	0.61 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.61 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.61 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.79 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	4.85 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.03 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	2.42 %
Roseobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	0.61 %
unclassified Hydrogenophilales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Hydrogenophilalia → Hydrogenophilales → unclassified Hydrogenophilales	0.61 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.61 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.61 %
Syntrophobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales	0.61 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.79 %
Methyloceanibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	3.03 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.42 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2.42 %
unclassified Hyphomicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae	1.21 %
Methyloligella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloligella	0.61 %
Hydrogenophilales bacterium 17-61-9	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Hydrogenophilalia → Hydrogenophilales → unclassified Hydrogenophilales → Hydrogenophilales bacterium 17-61-9	0.61 %
Syntrophaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae	0.61 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.61 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.61 %
Roseobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	0.61 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.79 %
Methyloceanibacter caenitepidi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	3.03 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2.42 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	1.82 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1.21 %
Methyloligella halotolerans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloligella → Methyloligella halotolerans	0.61 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.61 %
Desulfomonile	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfomonile	0.61 %
Hydrogenophilales bacterium 17-61-9	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Hydrogenophilalia → Hydrogenophilales → unclassified Hydrogenophilales → Hydrogenophilales bacterium 17-61-9	0.61 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.61 %
Roseobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	0.61 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.79 %
Methyloceanibacter caenitepidi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	3.03 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2.42 %
Bradyrhizobium sp. WSM1253	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. WSM1253	1.21 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1.21 %
Bradyrhizobium sp. WSM2793	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. WSM2793	0.61 %
unclassified Actinomadura	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → unclassified Actinomadura	0.61 %
Desulfomonile tiedjei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfomonile → Desulfomonile tiedjei	0.61 %
Methyloligella halotolerans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloligella → Methyloligella halotolerans	0.61 %
Hydrogenophilales bacterium 17-61-9	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Hydrogenophilalia → Hydrogenophilales → unclassified Hydrogenophilales → Hydrogenophilales bacterium 17-61-9	0.61 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.61 %
Roseobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	0.61 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.79 %
Methyloceanibacter caenitepidi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	3.03 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2.42 %
Bradyrhizobium sp. WSM1253	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. WSM1253	1.21 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1.21 %
Actinomadura sp. BRA 177	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → unclassified Actinomadura → Actinomadura sp. BRA 177	0.61 %
Bradyrhizobium sp. WSM2793	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. WSM2793	0.61 %
Desulfomonile tiedjei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfomonile → Desulfomonile tiedjei	0.61 %
Methyloligella halotolerans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloligella → Methyloligella halotolerans	0.61 %
Hydrogenophilales bacterium 17-61-9	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Hydrogenophilalia → Hydrogenophilales → unclassified Hydrogenophilales → Hydrogenophilales bacterium 17-61-9	0.61 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.61 %
Roseobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	0.61 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.61 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_17094607	All Organisms → cellular organisms → Bacteria	1885	Open in IMG/M
2088090015\|GPICI_9213261	All Organisms → cellular organisms → Bacteria → Proteobacteria	1492	Open in IMG/M
2124908032\|Perma_A_C_ConsensusfromContig96499	Not Available	629	Open in IMG/M
2124908044\|A5_c1_ConsensusfromContig96942	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	816	Open in IMG/M
2189573001\|GZR05M101EF9BP	Not Available	500	Open in IMG/M
2209111006\|2214751073	Not Available	890	Open in IMG/M
2228664022\|INPgaii200_c0687648	Not Available	511	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101574481	Not Available	502	Open in IMG/M
3300000567\|JGI12270J11330_10002248	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	14153	Open in IMG/M
3300000956\|JGI10216J12902_108321582	All Organisms → cellular organisms → Bacteria → Proteobacteria	1124	Open in IMG/M
3300003988\|Ga0055475_10071441	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1029	Open in IMG/M
3300003997\|Ga0055466_10249044	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	535	Open in IMG/M
3300004001\|Ga0055450_10070233	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1225	Open in IMG/M
3300004157\|Ga0062590_101273054	All Organisms → cellular organisms → Bacteria → Proteobacteria	722	Open in IMG/M
3300004157\|Ga0062590_101283045	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M
3300004479\|Ga0062595_100523896	All Organisms → cellular organisms → Bacteria	898	Open in IMG/M
3300004479\|Ga0062595_100780179	Not Available	783	Open in IMG/M
3300004479\|Ga0062595_102437000	Not Available	520	Open in IMG/M
3300005093\|Ga0062594_100023761	Not Available	2646	Open in IMG/M
3300005168\|Ga0066809_10219875	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	520	Open in IMG/M
3300005204\|Ga0068997_10164596	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. WSM2793	517	Open in IMG/M
3300005365\|Ga0070688_101665237	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfomonile → Desulfomonile tiedjei	522	Open in IMG/M
3300005365\|Ga0070688_101727013	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. WSM1253	513	Open in IMG/M
3300005434\|Ga0070709_10064199	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2347	Open in IMG/M
3300005435\|Ga0070714_100711385	All Organisms → cellular organisms → Bacteria	969	Open in IMG/M
3300005440\|Ga0070705_100916545	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300005617\|Ga0068859_103159729	Not Available	502	Open in IMG/M
3300005719\|Ga0068861_101228794	All Organisms → cellular organisms → Bacteria → Proteobacteria	726	Open in IMG/M
3300005719\|Ga0068861_101677719	Not Available	628	Open in IMG/M
3300005764\|Ga0066903_101479265	Not Available	1281	Open in IMG/M
3300005844\|Ga0068862_102406564	Not Available	538	Open in IMG/M
3300006041\|Ga0075023_100153854	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	850	Open in IMG/M
3300006050\|Ga0075028_100032020	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	2417	Open in IMG/M
3300006057\|Ga0075026_100639972	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. WSM1253	629	Open in IMG/M
3300006175\|Ga0070712_101820541	Not Available	533	Open in IMG/M
3300006755\|Ga0079222_11277075	Not Available	666	Open in IMG/M
3300006954\|Ga0079219_10326145	Not Available	969	Open in IMG/M
3300006954\|Ga0079219_10492756	Not Available	855	Open in IMG/M
3300007740\|Ga0104326_132837	All Organisms → cellular organisms → Bacteria → Proteobacteria	3946	Open in IMG/M
3300009090\|Ga0099827_11680551	Not Available	553	Open in IMG/M
3300009094\|Ga0111539_10745902	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1140	Open in IMG/M
3300009094\|Ga0111539_11572141	Not Available	763	Open in IMG/M
3300009094\|Ga0111539_13250700	Not Available	524	Open in IMG/M
3300009146\|Ga0105091_10036525	Not Available	2157	Open in IMG/M
3300009148\|Ga0105243_11839879	Not Available	637	Open in IMG/M
3300009523\|Ga0116221_1007282	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	6718	Open in IMG/M
3300009545\|Ga0105237_12265449	Not Available	553	Open in IMG/M
3300009553\|Ga0105249_12125728	Not Available	634	Open in IMG/M
3300010154\|Ga0127503_11164503	Not Available	844	Open in IMG/M
3300010373\|Ga0134128_12934583	Not Available	525	Open in IMG/M
3300010375\|Ga0105239_11863076	Not Available	697	Open in IMG/M
3300010396\|Ga0134126_12660232	Not Available	543	Open in IMG/M
3300010397\|Ga0134124_13133053	Not Available	506	Open in IMG/M
3300010398\|Ga0126383_10947869	Not Available	948	Open in IMG/M
3300012469\|Ga0150984_102316511	All Organisms → cellular organisms → Bacteria → Proteobacteria	1270	Open in IMG/M
3300012497\|Ga0157319_1019594	Not Available	645	Open in IMG/M
3300012931\|Ga0153915_11279017	Not Available	857	Open in IMG/M
3300012943\|Ga0164241_10576743	Not Available	813	Open in IMG/M
3300012951\|Ga0164300_10095913	All Organisms → cellular organisms → Bacteria → Proteobacteria	1291	Open in IMG/M
3300012951\|Ga0164300_10647630	Not Available	631	Open in IMG/M
3300012957\|Ga0164303_10898186	Not Available	620	Open in IMG/M
3300012957\|Ga0164303_11218604	Not Available	552	Open in IMG/M
3300012960\|Ga0164301_10173501	All Organisms → cellular organisms → Bacteria	1346	Open in IMG/M
3300012960\|Ga0164301_11628774	Not Available	537	Open in IMG/M
3300012960\|Ga0164301_11720879	Not Available	524	Open in IMG/M
3300012961\|Ga0164302_10387447	Not Available	948	Open in IMG/M
3300012961\|Ga0164302_11168066	Not Available	613	Open in IMG/M
3300012984\|Ga0164309_11718721	Not Available	538	Open in IMG/M
3300012985\|Ga0164308_10480045	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1035	Open in IMG/M
3300012985\|Ga0164308_11633023	Not Available	596	Open in IMG/M
3300012987\|Ga0164307_11006087	All Organisms → cellular organisms → Bacteria	678	Open in IMG/M
3300012989\|Ga0164305_10563920	All Organisms → cellular organisms → Bacteria	908	Open in IMG/M
3300012989\|Ga0164305_11372357	Not Available	621	Open in IMG/M
3300013306\|Ga0163162_12794802	Not Available	562	Open in IMG/M
3300013308\|Ga0157375_12272871	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	646	Open in IMG/M
3300013768\|Ga0120155_1019065	All Organisms → cellular organisms → Bacteria → Proteobacteria	2285	Open in IMG/M
3300013770\|Ga0120123_1168265	Not Available	524	Open in IMG/M
3300014056\|Ga0120125_1044730	Not Available	967	Open in IMG/M
3300014058\|Ga0120149_1172632	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	600	Open in IMG/M
3300014318\|Ga0075351_1028747	Not Available	923	Open in IMG/M
3300014969\|Ga0157376_10097566	All Organisms → cellular organisms → Bacteria → Proteobacteria	2560	Open in IMG/M
3300015371\|Ga0132258_10828135	Not Available	2334	Open in IMG/M
3300015371\|Ga0132258_11174153	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1940	Open in IMG/M
3300015371\|Ga0132258_11875103	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1510	Open in IMG/M
3300015373\|Ga0132257_101545156	Not Available	848	Open in IMG/M
3300015374\|Ga0132255_101881730	All Organisms → cellular organisms → Bacteria → Proteobacteria → Hydrogenophilalia → Hydrogenophilales → unclassified Hydrogenophilales → Hydrogenophilales bacterium 17-61-9	910	Open in IMG/M
3300015374\|Ga0132255_103342205	Not Available	683	Open in IMG/M
3300017993\|Ga0187823_10020512	All Organisms → cellular organisms → Bacteria → Proteobacteria	1660	Open in IMG/M
3300018028\|Ga0184608_10100996	Not Available	1204	Open in IMG/M
3300018054\|Ga0184621_10265137	Not Available	610	Open in IMG/M
3300018081\|Ga0184625_10240830	Not Available	948	Open in IMG/M
3300018422\|Ga0190265_11020783	Not Available	949	Open in IMG/M
3300018466\|Ga0190268_12305672	Not Available	508	Open in IMG/M
3300019259\|Ga0184646_1056984	Not Available	656	Open in IMG/M
3300019269\|Ga0184644_1700584	Not Available	598	Open in IMG/M
3300020078\|Ga0206352_11224634	Not Available	595	Open in IMG/M
3300022171\|Ga0213857_1005129	Not Available	1135	Open in IMG/M
3300022171\|Ga0213857_1012894	Not Available	831	Open in IMG/M
3300022171\|Ga0213857_1025252	Not Available	665	Open in IMG/M
3300022171\|Ga0213857_1029658	Not Available	631	Open in IMG/M
3300022171\|Ga0213857_1031323	Not Available	620	Open in IMG/M
3300022171\|Ga0213857_1034374	Not Available	601	Open in IMG/M
3300025568\|Ga0210095_1053794	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	952	Open in IMG/M
3300025910\|Ga0207684_11480889	Not Available	553	Open in IMG/M
3300025911\|Ga0207654_10669008	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	744	Open in IMG/M
3300025955\|Ga0210071_1033629	Not Available	648	Open in IMG/M
3300025961\|Ga0207712_11765775	Not Available	554	Open in IMG/M
3300025981\|Ga0207640_11694983	Not Available	570	Open in IMG/M
3300026048\|Ga0208915_1018954	Not Available	619	Open in IMG/M
3300026078\|Ga0207702_10747688	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	965	Open in IMG/M
3300026118\|Ga0207675_101416459	Not Available	716	Open in IMG/M
3300027497\|Ga0208199_1026427	All Organisms → cellular organisms → Bacteria → Proteobacteria	1281	Open in IMG/M
3300027568\|Ga0208042_1046551	Not Available	1111	Open in IMG/M
3300027675\|Ga0209077_1018408	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → unclassified Actinomadura → Actinomadura sp. BRA 177	1859	Open in IMG/M
3300027894\|Ga0209068_10123317	All Organisms → cellular organisms → Bacteria → Proteobacteria	1384	Open in IMG/M
3300028380\|Ga0268265_11654313	Not Available	646	Open in IMG/M
3300028381\|Ga0268264_10180805	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1915	Open in IMG/M
3300028592\|Ga0247822_11216758	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	629	Open in IMG/M
3300028792\|Ga0307504_10348998	Not Available	570	Open in IMG/M
3300028792\|Ga0307504_10358745	Not Available	564	Open in IMG/M
3300028807\|Ga0307305_10335496	Not Available	686	Open in IMG/M
3300028868\|Ga0302163_10146836	Not Available	628	Open in IMG/M
3300029923\|Ga0311347_10374329	Not Available	868	Open in IMG/M
3300030000\|Ga0311337_11313124	Not Available	633	Open in IMG/M
3300030047\|Ga0302286_10202793	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1001	Open in IMG/M
3300030294\|Ga0311349_10136265	All Organisms → cellular organisms → Bacteria → Proteobacteria	2299	Open in IMG/M
3300030339\|Ga0311360_10754553	Not Available	774	Open in IMG/M
3300030829\|Ga0308203_1083451	Not Available	529	Open in IMG/M
3300030904\|Ga0308198_1078648	Not Available	551	Open in IMG/M
3300031058\|Ga0308189_10275279	Not Available	647	Open in IMG/M
3300031093\|Ga0308197_10344077	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloligella → Methyloligella halotolerans	565	Open in IMG/M
3300031114\|Ga0308187_10300211	Not Available	602	Open in IMG/M
3300031226\|Ga0307497_10035436	All Organisms → cellular organisms → Bacteria	1659	Open in IMG/M
3300031232\|Ga0302323_102548475	Not Available	584	Open in IMG/M
3300031256\|Ga0315556_1237029	Not Available	632	Open in IMG/M
3300031274\|Ga0307442_1001206	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	12802	Open in IMG/M
3300031274\|Ga0307442_1005555	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	5618	Open in IMG/M
3300031280\|Ga0307428_1003413	All Organisms → cellular organisms → Bacteria → Proteobacteria	6858	Open in IMG/M
3300031280\|Ga0307428_1008880	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3724	Open in IMG/M
3300031368\|Ga0307429_1023461	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2051	Open in IMG/M
3300031368\|Ga0307429_1162339	Not Available	590	Open in IMG/M
3300031562\|Ga0310886_10994007	Not Available	537	Open in IMG/M
3300031707\|Ga0315291_10641766	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	954	Open in IMG/M
3300031720\|Ga0307469_11240777	Not Available	706	Open in IMG/M
3300031740\|Ga0307468_101668989	Not Available	598	Open in IMG/M
3300031740\|Ga0307468_102299444	Not Available	524	Open in IMG/M
3300031820\|Ga0307473_10293403	All Organisms → cellular organisms → Bacteria	1020	Open in IMG/M
3300031820\|Ga0307473_11325929	Not Available	540	Open in IMG/M
3300031834\|Ga0315290_10025162	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4655	Open in IMG/M
3300031940\|Ga0310901_10102181	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	1037	Open in IMG/M
3300032003\|Ga0310897_10154106	All Organisms → cellular organisms → Bacteria → Proteobacteria	968	Open in IMG/M
3300032013\|Ga0310906_11117491	Not Available	571	Open in IMG/M
3300032061\|Ga0315540_10031637	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	2603	Open in IMG/M
3300032062\|Ga0315551_10342518	Not Available	554	Open in IMG/M
3300032075\|Ga0310890_10135186	All Organisms → cellular organisms → Bacteria	1607	Open in IMG/M
3300032118\|Ga0315277_10190041	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2243	Open in IMG/M
3300032164\|Ga0315283_10000042	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	65965	Open in IMG/M
3300032180\|Ga0307471_100653728	Not Available	1214	Open in IMG/M
3300032180\|Ga0307471_101085683	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	966	Open in IMG/M
3300032782\|Ga0335082_11291222	Not Available	599	Open in IMG/M
3300032805\|Ga0335078_12715207	Not Available	504	Open in IMG/M
3300033158\|Ga0335077_11449165	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	660	Open in IMG/M
3300033433\|Ga0326726_11254151	Not Available	721	Open in IMG/M
3300033551\|Ga0247830_10148903	All Organisms → cellular organisms → Bacteria → Proteobacteria	1708	Open in IMG/M
3300033551\|Ga0247830_11217772	Not Available	601	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	81.82%
Host-Associated	Host-Associated	18.18%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	58.18%
Aquatic	Environmental → Aquatic	23.64%
Plants	Host-Associated → Plants	18.18%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	53.33%
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.91%
Freshwater	Environmental → Aquatic → Freshwater	10.30%
Marine	Environmental → Aquatic → Marine	9.09%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.27%
Peat	Environmental → Terrestrial → Peat	4.85%
Sediment	Environmental → Aquatic → Sediment	4.24%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	45.45%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.67%
Sediment	Environmental → Aquatic → Freshwater → Sediment	6.06%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	5.45%
Loam	Environmental → Terrestrial → Soil → Loam	4.85%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	4.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.24%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.24%
Wetlands	Environmental → Aquatic → Marine → Wetlands	3.64%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.03%
Lake	Environmental → Aquatic → Freshwater → Lake	2.42%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.21%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.61%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.61%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.24%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.67%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	6.06%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	5.45%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.45%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.85%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	4.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.24%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.24%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.24%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.24%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	3.64%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	3.64%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.03%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.03%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	2.42%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.61%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.61%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.61%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.61%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	16.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.85%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.24%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	4.24%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.24%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	3.64%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	3.64%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	3.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.64%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	3.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.03%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	2.42%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.42%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.42%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	2.42%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.42%
Salt Marsh Sediment	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh Sediment	1.82%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.82%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.82%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.82%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.82%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.82%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.82%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.21%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.21%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	1.21%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.21%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.21%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.21%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.21%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.21%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.61%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.61%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.61%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.61%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.61%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.61%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.61%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.61%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.61%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.61%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.61%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.61%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.61%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.61%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2088090015	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
2124908032	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Perma_all	Environmental	Open in IMG/M
2124908044	Soil microbial communities from permafrost in Bonanza Creek, Alaska, sample from Active Layer A5	Environmental	Open in IMG/M
2189573001	Grass soil microbial communities from Rothamsted Park, UK - FD2 (NaCl 300g/L 5ml)	Environmental	Open in IMG/M
2209111006	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample Wild type Col-0	Host-Associated	Open in IMG/M
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003988	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Muzzi_CordB_D2	Environmental	Open in IMG/M
3300003997	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D1	Environmental	Open in IMG/M
3300004001	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Galinas_PWC_D1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005204	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D2	Environmental	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007740	Permafrost core soil microbial communities from Svalbard, Norway - sample 2-9-2 Soapdenovo	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009146	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012497	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.old.240510	Host-Associated	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012943	Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300013768	Permafrost microbial communities from Nunavut, Canada - A35_65cm_0M	Environmental	Open in IMG/M
3300013770	Permafrost microbial communities from Nunavut, Canada - A15_5cm_18M	Environmental	Open in IMG/M
3300014056	Permafrost microbial communities from Nunavut, Canada - A20_5cm_0M	Environmental	Open in IMG/M
3300014058	Permafrost microbial communities from Nunavut, Canada - A3_65cm_0.25M	Environmental	Open in IMG/M
3300014318	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D1_rd	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017993	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300019259	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019269	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022171	Metatranscriptome of freshwater sediment microbial communities from pre-fracked creek in Pennsylvania, United States - G-2016_45 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025568	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Galinas_PWA_D1 (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025955	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026048	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleB_D1 (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027497	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG (SPAdes)	Environmental	Open in IMG/M
3300027568	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG (SPAdes)	Environmental	Open in IMG/M
3300027675	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028868	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E2_3	Environmental	Open in IMG/M
3300029923	II_Fen_E1 coassembly	Environmental	Open in IMG/M
3300030000	I_Fen_N3 coassembly	Environmental	Open in IMG/M
3300030047	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E2_3	Environmental	Open in IMG/M
3300030294	II_Fen_E3 coassembly	Environmental	Open in IMG/M
3300030339	III_Bog_N1 coassembly	Environmental	Open in IMG/M
3300030829	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_357 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030904	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_202 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031256	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1603-10	Environmental	Open in IMG/M
3300031274	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1604-30	Environmental	Open in IMG/M
3300031280	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1603-240	Environmental	Open in IMG/M
3300031368	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1603-230	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031707	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_20	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031834	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0	Environmental	Open in IMG/M
3300031940	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2	Environmental	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032061	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1601-10	Environmental	Open in IMG/M
3300032062	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1602-90	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032118	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_15	Environmental	Open in IMG/M
3300032164	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_01122100	2088090014	Soil	LFALQTNAIPIEYLVAAVLIGAFSAPAFAEEIYVAFDPASHKCTMMHSQPASGMKVMGTFKSEAEAKAAMAKMKDCEG
GPICI_01449260	2088090015	Soil	MRKYLVAAVLIGAFSAPAFAEEIYVAFDPASHKCTMMHSQPASGMKVMGTFKSEAEAKAAMAKMKDCEG
Perma_A_C_01961760	2124908032	Soil	MQKYLLAAVFVVALAGPAFAEQFFVAFDPASHKCSMMHSQPAAPMKMMGKYATKAEAEKAMASMKECTAG
A5_c1_01766320	2124908044	Soil	NPVAVRHVLVVVATPWRFIMRKYLIAATLVVVFAGPAFAEQFFVAFDPASHKCSMMHSQPAAPMKSMGTFKTEAEASKAMAGMKECQG
FD2_07534730	2189573001	Grass Soil	LALTRLEDNKSKEYPSMKRYLVAGVXVFAFVSPALAEQFYVAFDPASHKCTMMHSQPAAPMKSMGGPFKTEAEAHKAMASMKECTS
2213763034	2209111006	Arabidopsis Rhizosphere	MKKYLLATALIVGIVTPALAEQFYVAFDPASHKCSMMHSQPVSPMKNMGSFATRAEAHK
INPgaii200_06876481	2228664022	Soil	MKKLLIASALIIGFVTPALAEQFYVAFDPASHKCTMMHSIPSGSMKKMGGPYSSRAAARKAMHGMKECTA
INPhiseqgaiiFebDRAFT_1015744811	3300000364	Soil	MRKYLVAAVLIGAFSAPAFAEEIYVAFDPASHKCTMMHSQPASGMKVMGTFKSEAEAKAAMAKMKDCEG*
JGI12270J11330_100022483	3300000567	Peatlands Soil	MRKYIVVATLIIGFATPALAEQFYVAFDPASHKCTMMHSQPTGSMKSMGGPYKTEAEAKKAMAGMKDCAG*
JGI10216J12902_1083215822	3300000956	Soil	MRKYLVAAVLIGAFSAPAFAETIYVAFDPASHKCTMMHSQPASGMKMMGTFKSEAEAKAAMAKMKECEG*
Ga0055475_100714412	3300003988	Natural And Restored Wetlands	VSKYVIAAALIVAFATPALAEQFYVAFDPASRKCEMMHYQPSGSKKSMGGPYATIDEARTAMAGMDECH*
Ga0055466_102490441	3300003997	Natural And Restored Wetlands	MNKYVLAAAFLVALAGPAFAEEFFVAFDPASHKCSMMHSQPGSNMKLMGTYGSKAEAHKAMAGMKECQG*
Ga0055450_100702332	3300004001	Natural And Restored Wetlands	VSKYLIAAALVVAFATPALAEQFYVAFDPASHKCEMMHSQPSGSMKSMGGPYATKAEAHAAMTNMKECN*
Ga0062590_1012730541	3300004157	Soil	ALIVAFSAPAFAEQFYVAFDPASHKCTMMHDIPGDKMKNMGGPYNSKEEAEKAMAGMEACAK*
Ga0062590_1012830452	3300004157	Soil	IPIEYLVAAVLIGAFSAPAFAETTCTMMHSQPASGMKVMGTFKSEAEAKAAMAKMKDCEG
Ga0062595_1005238962	3300004479	Soil	MKKLLIASALIIGFVTPALAEQFYVAFDPASHKCTMMHSIPSGSMKKMGGPYSSRAAARKAMHGMKECTA*
Ga0062595_1007801792	3300004479	Soil	MQKYLLSAVFVVALAGPALAEEFYVAFDPASHKCSMMHSQPVSPMKNMGSFATRAEAHKAMGSMKECTAG*
Ga0062595_1024370001	3300004479	Soil	MKKYLFAAALTVAFATPALAEQFYVAFDPASHKCTMMHNQPTGSMKSMGGPYATEDEANKAMASMKECTS*
Ga0062594_1000237615	3300005093	Soil	MKKYLVAALMVAAYVTPAFAEEFYVAFDPASHKCSMMHNQPSGNMKNMGGPYKTEAEAHKAMASMKGCEG*
Ga0066809_102198752	3300005168	Soil	MKRYLVAGVLVFAFVSPALAEQFYVAFDPASHKCTMMHSQPAAPMKSMGGPYKTKAEA
Ga0068997_101645961	3300005204	Natural And Restored Wetlands	MQKYLLAAVFVVALAGPAFAEEFYVAFDPASHKCSLMHSQPASPMKSMGKFGTKAEAEKAMGSMKECTAG*
Ga0070688_1016652371	3300005365	Switchgrass Rhizosphere	MKRYLVAGVLVFAFVSPALAEQFYVAFDPASHKCTMMHSQPAAPMKNMGGPFKTEAEAHKAMASMKECEG*
Ga0070688_1017270131	3300005365	Switchgrass Rhizosphere	MKRYLLVGAFVMAFATPALAEQFYVAFDPASHKCTMMHSQPAAPMKSMGGPFKTEAEAHKAMASIKECEG*
Ga0070709_100641995	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MQKYLLAAVFVVALAGPALAEEFYVAFDPASHKCSMMHSQPVSPMKNMGSFATRAEAHKAMGSMKECTAG*
Ga0070714_1007113851	3300005435	Agricultural Soil	VVALAGPALAEEFYVAFDPASHKCSMMHSQPVSPMKNMGSFATRAEAHKAMGSMKECTAG
Ga0070705_1009165451	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MKRYLLVGAFVMAFATPALAEQFYVAFDPASHKCTMMHSQPAAPMKSMGGPFKTEAEAHKAMASMKECEG*
Ga0068859_1031597291	3300005617	Switchgrass Rhizosphere	MKKYLLATALIVGFVTPALAEQFYVAFDPASHKCTMMHSIPSGSMKKMGGPYSSRAAARKAMHGMKECTA*
Ga0068861_1012287941	3300005719	Switchgrass Rhizosphere	MKRYLVASILVFAFVSPALAEQFHVAFDPASHKCTMMHSQPAAPMKSMGGPFKTEAEAHKAMASMKE
Ga0068861_1016777192	3300005719	Switchgrass Rhizosphere	MKRYLVAGVLVFAFVSPALAEQFYVAFDPASKKCTMMHSQPAAPMKSMGGPFKTEAEAHKAMASMKECTS*
Ga0066903_1014792653	3300005764	Tropical Forest Soil	MKKYLLASALIVGVVTPALAEQFYVAFDPASHKCTMMHTIPAAPMKNMGGPYKSKADAEKAMHGMKDCTA*
Ga0068862_1024065642	3300005844	Switchgrass Rhizosphere	MRKYVIAVAFVVAFMTPAFAEEIYVAFDPASHKCTMMHSQPTAPMKSMGKFKTEAEAKAAMAGMKDCEQ*
Ga0075023_1001538541	3300006041	Watersheds	MRKYLAAAALIVAFATPALAEQFYVAFDPASHKCTMMHSQPAAPMKSMGSFKTEAEATKAMAGMKECQG*
Ga0075028_1000320202	3300006050	Watersheds	MHKYLVAAVLVVAFAGAALAVESGQYYVGFDGKKCSMMTSEPTGSMKKMGGPYKTEAEAHKAMAGMKECQG*
Ga0075026_1006399721	3300006057	Watersheds	MKKYLLASALIVGIVTPALAEQFYVAFDPASHKCSMMHSIPSGSMKNMGGPYKSKAEASKAMHGMKECTA*
Ga0070712_1018205411	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MQKYFLAAVFVVALAGPAFAEEFYVAFDPASHKCSMMHSQPASPMKSMGKFGTKAEAEKAMSSMKECTAG*
Ga0079222_112770751	3300006755	Agricultural Soil	MKKYLVAAVLIVSFAAPAFAEEIYVAFDPASHKCTMMHSQPTAPMKSMGSFKSEAEAK
Ga0079219_103261452	3300006954	Agricultural Soil	ALIVSFAAPAFAEEIYVAFDPASHKCTMMHSQPTAPMKSMGSFKSEAEAKAAMGKMKECEG*
Ga0079219_104927561	3300006954	Agricultural Soil	MQKYLLSAVFVVALAGPALAEEFYVAFDPPSHKCSMMHSQPVSPMKNMGSFATRAEAHKAMGSMKECTAG*
Ga0104326_1328371	3300007740	Soil	TVVTTPWRFIMRKYLIAATLVVVFAGPAFAEQFFVAFDPASHKCSMMHSQPAAPMKSMGTFKTEAEASKAMAGMKECQG*
Ga0099827_116805512	3300009090	Vadose Zone Soil	MQKYLIAAALVVAFVTPALAEQFYVAFDPASHKCSMMHSQPGSGMKVMGTYATEAEATKAMAGMKECNPG*
Ga0111539_107459023	3300009094	Populus Rhizosphere	AGAFVVAFMTPAFAEEIYVAFDPASHKCTMMHSQPTAPMKSMGKFKTEAEAKAAMAGMKDCEQ*
Ga0111539_115721412	3300009094	Populus Rhizosphere	MKKLLITSALIIGFVTPALAEQFYVAFDPASHKCTMMHSIPSGSMKKMGGPYSSRAAARKAMHGMKECTA*
Ga0111539_132507002	3300009094	Populus Rhizosphere	AGAFVVAFMTPAFAEEIYVAFDPASHKCTMMHSQPTAPMKLMGKFKTEAEAKAAMAGMKDCEQ*
Ga0105091_100365252	3300009146	Freshwater Sediment	MKRYLVAGVLVFAFVSPALAEQFYVAFDPASHKMHDDAQPARGTMKSMGGPFKTEAEAHKAMASMKECTS*
Ga0105243_118398791	3300009148	Miscanthus Rhizosphere	MKKYLVAAVLVAAYASPALAEQFYVAFDPASHKCTMMHDQPAAPMKSMGGPFKTEAEAHKAMASMKECEG*
Ga0116221_10072825	3300009523	Peatlands Soil	MRKYIVVATLIIGFATPALAEQFYVAFDPASHKCTMMHSQPTGSMKSMGGPYKTEAEAKKAMTGMKDCAG*
Ga0105237_122654491	3300009545	Corn Rhizosphere	MKQYLVAAVFVAAFAAPALAEQFYVAFDPASHKCTMMHSEPAAPMKSMGAFKTEAEAHKA
Ga0105249_121257281	3300009553	Switchgrass Rhizosphere	MKKYLLAAALIVAFATPAFAEQFYVAFDPASHKCTMMHNQPSGSMKSMGGPYKTEDEANKAMASMKECQG*
Ga0127503_111645031	3300010154	Soil	MKRYLVAGVLVFAFVSPALAEQFYVAFDPASHKCTMMHNEPAAPMKSMGGPFKTEAEAHKAMASMKECTS*
Ga0134128_129345831	3300010373	Terrestrial Soil	PTQRTLMRVWQQRGNPQSKESLMKRYLLVGAFVMAFATPALAEQFYVAFDPASHKCTMMHSQPAAPMKSMGGPFKTEAEAHKAMASMKECEG*
Ga0105239_118630761	3300010375	Corn Rhizosphere	MKRYLIAGVLVFAFVSPALAEQFYVPASHKCTMMHSQPTGNMKSMGGPFKTEAEAHKAMASMKECTS*
Ga0134126_126602322	3300010396	Terrestrial Soil	MRKYVIAVAFVVAFMTPAFAEEIYVAFDPASHKCTMMHSQPTAPMKLMGKFKTEAEAKAAMAGMKDCEQ*
Ga0134124_131330531	3300010397	Terrestrial Soil	MRRYLIAGAFVVAFVTPALAEEIYVAFDPASHKCTMMHSQPASPMKSMGKFKTEAEAKKAMAGMKDCEQ*
Ga0126383_109478692	3300010398	Tropical Forest Soil	LLASALIVGVVTPALAEQFYVAFDPASHKCTMMHTIPAAPMKNMGGPYKSKAHAEKAMHGMKDCTA*
Ga0150984_1023165112	3300012469	Avena Fatua Rhizosphere	VLIGAFAAPAFAETIYVAFDPASHKCTMMHSQPASGMKVMGTYKSEAEAKAAMATMKDCEK*
Ga0157319_10195942	3300012497	Arabidopsis Rhizosphere	MKKYLLATALIVGIVTPALAEQFYVAFDPASHKCSMMHSIPSGSMKNMGGPYKTKAEAHKAMQGM
Ga0153915_112790173	3300012931	Freshwater Wetlands	KRFPSGHNSAIQGHYPKETTLMRKYLAAAALIVAFATPALAEQFYVAFDPASHKCTMMHSQPAAPMKSMGSFKTEAEATKAMAGMKECQG*
Ga0164241_105767432	3300012943	Soil	MKKYLVAAVLVAAFAGPALAEQFYVAFDPASHKCTMMHSQPAAPMKSMGAFKTEAEAHKA
Ga0164300_100959131	3300012951	Soil	LIVGFVTPALAEQFYVAFDPASHKCSMMHTIPSGSMKNMGGPYKTKAEAHKAMQGMKECTA*
Ga0164300_106476301	3300012951	Soil	MKKLLIASALIIGFVTPALAEQFYVAFDPASHKCTMMHSIPSGSMKKMGGPYSSRAAARKAMHGMKECT
Ga0164303_108981862	3300012957	Soil	MKRYLIAGVLVFAFVSPALAEQFYVAFDPASHKCTMMHSEPAAPMKSMGAFKTEAEAHKAMASMKECTS*
Ga0164303_112186041	3300012957	Soil	MKKLLIASALIIGFITPALAEQFYVAFDPASHKCTMMHSIPSGSMKKMGGPYSSRAAARKAMHGMKECTA*
Ga0164301_101735012	3300012960	Soil	VALAGPAFAEEFYVAFDPASHKCSMMHSQPASPMKSMGKFGTKAEAEKAMSSMKECTAG*
Ga0164301_116287741	3300012960	Soil	MKKLLIASALIIGFITPALAEQFYVAFDPASHNCTMMHSIPSGSMKKMGGPYSSRAAARKAMHGMKECTA*
Ga0164301_117208791	3300012960	Soil	MKRYLVASILVFAFVSPALAEQFYVAFDPASHKCTMMHSQPAAPMKSMGGPFKTEAEAHKAMASMKECEG*
Ga0164302_103874472	3300012961	Soil	MKRYLIAGVLAFAFVSPALAEQFYVAFDPASHKCTMMHSQPAAPMKSMGGPFKTEAEAHKAMASMKECEG*
Ga0164302_111680661	3300012961	Soil	KKYIVAAAFIVAFVTPAFAEEIYVAFDPASHKCTMMHSQPASPMKSMGKFKTEAEAKTAMASMKDCEQ*
Ga0164309_117187211	3300012984	Soil	VVALAGPAFAEEFYVAFDPASHKCSMMHSQPASPMKSMGKFGTKAEAEKAMSSMKECTAG
Ga0164308_104800453	3300012985	Soil	MKRYLLAGALVVAFVTPALAEQFYVAFDPASHKCTMMHDQPAAPMKSMGGPFKTEAEAHKAMASMTASRQPA*
Ga0164308_116330231	3300012985	Soil	SNEALSAGVLVFAFVSPALAEQFYVAFDPASHKCTMMHSQPAAPMKSRGGPFKTEAEAHKAMASMKECEG*
Ga0164307_110060872	3300012987	Soil	MKKLLIASALTIAFVTPALAEQFYVAFDPASHKCTMMHSIPSGSMKKMGGPYSSRAAARKAMHGMKECTA*
Ga0164305_105639201	3300012989	Soil	PRSENMKKYLLATALIVGFVTPALAEQFYVAFDPASHKCTMMHSIPSGSMKKMGGPYSSRAAARKAMHGMKECTA*
Ga0164305_113723571	3300012989	Soil	MKRYLIAGVLVFAFVSPALAEQCYVAFDPASHKCTMMHSQPAAPMKSMGGPFKTEAEAHKAMASMKECEG*
Ga0163162_127948022	3300013306	Switchgrass Rhizosphere	MKRYLVAGVLVFAFVSPALAEQFYVAFDPASKKCTMMHSQPAAPMKSMGGPFKTEAEAHKAMASMKECEG*
Ga0157375_122728711	3300013308	Miscanthus Rhizosphere	SSRSNLMKRYLLVGAFVMAFATPALAEQFYVAFDPASHKCTMMHSQPAAPMKSMGGPFKTEAEAHKAMASIKECEG*
Ga0120155_10190654	3300013768	Permafrost	MRKYVIAAAFVVAFVTPALAEEFYVAFDPASHKCTMMHSQPASPMKSMGKFATKAEAEKAMAGMKDCEK*
Ga0120123_11682651	3300013770	Permafrost	MKKYIVAVALIVAFVTPAFAEEIYVAFDPASHKCSMMHSQPASPMKSMGKYKTEAEAKTAMASMKECQG*
Ga0120125_10447301	3300014056	Permafrost	MRKYVIAAAFVVAFVTPALAEEFYVAFAPASHKCTMMHSQPASPMKSMGKFATKAEAEKAMAGMKDCEK*
Ga0120149_11726321	3300014058	Permafrost	SKETKMRKYVIAAAFVVAFVTPALAEEFYVAFDPASHKCTMMHSQPASPMKSMGKFATKAEAEKAMAGMKDCEK*
Ga0075351_10287471	3300014318	Natural And Restored Wetlands	MQKYLLAAVFVVALAGPAFAEEFYVAFDPASHKCSMMHSQPASPMKSMGKFGTKAEAEKAMASMKECTAG*
Ga0157376_100975664	3300014969	Miscanthus Rhizosphere	MQKYFLAAVFVVALAGPAFAEEFYVAFDPASHKCSMMHSQPASPMKSMGKFGTKAEAEKAMSSMKECTTG*
Ga0132258_108281354	3300015371	Arabidopsis Rhizosphere	MKRYLIAGVLVFAFVSPALAEQFYVAFDPASHKCSMMHSQPAAPMKSMGGPFKTEAEAHKAMASMKECEG*
Ga0132258_111741534	3300015371	Arabidopsis Rhizosphere	MKKYLVAALMIAAYVTPALAEEFYVAFDPASHKCTMMHSQPTGNMKSMGGPYKTKAEAHTAMAGMKDCEK*
Ga0132258_118751032	3300015371	Arabidopsis Rhizosphere	MKRYLIAGVLVFAFVSPALAEQFYVAFDPASHKCTMMHSQPAAPMKSMGGPFKTEAEAHKAMASMKECEG*
Ga0132257_1015451562	3300015373	Arabidopsis Rhizosphere	MKRYLIAGVLVFAFVSPALAEQFYVAFDPASHKCTMMHSQPAAPLKSMGGPFKTEAEAHKAMASMKECEG*
Ga0132255_1018817301	3300015374	Arabidopsis Rhizosphere	VNLMKRYLIAGVLVFAFVSPALAEQFYVAFDPASHKCSMMHSQPAAPMKSMGGPFKTEAEAHKAMASMKECEG*
Ga0132255_1033422052	3300015374	Arabidopsis Rhizosphere	MKRYLIAGVLVFAFVSPALAEQFYVAFDPASHKCTMMHSRPAAPMKSMGGPFKTEAEAHKAMASMKECEG*
Ga0187823_100205124	3300017993	Freshwater Sediment	MQKYLLAAVFVVALAGPALAEEFYVAFDPASHKCSMMHSQPVSPMKNMGSFATRAEAHKAMGSMKECTAG
Ga0184608_101009961	3300018028	Groundwater Sediment	MKRYLVAGVLVFAFVSPALAEQFYVAFDPASHKCTMMHSQPAAPMKSMGGPFKTEAEAHKAMASMKECTS
Ga0184621_102651371	3300018054	Groundwater Sediment	MKRYLIAGVLVFAFVSPALAEQFYVAFDPASHKCTMMHSQPAAPMKSMGGPFKTEAEAHKAMASMKECTS
Ga0184625_102408302	3300018081	Groundwater Sediment	SKECPSMKRYLVAGVLVFAFVSPALAEQFYVAFDPASKKCTMMHSQPAAPMKSMGGPFKTEAEAHKAMASMKECEG
Ga0190265_110207833	3300018422	Soil	MKKYLIAGLLVAAFLTPALAEQFYVAFDPASKKCTMMHSQPASPMKSMGTYKTEAEAKTAMAKMKECEK
Ga0190268_123056721	3300018466	Soil	MKKYLVAAVFVATFAGPALAEQFYVAFDPASHKCTMMHREPAAPMKSMGAFKTEAEAH
Ga0184646_10569841	3300019259	Groundwater Sediment	MKKYLIAGVMIAAFAAPAFAEQFYVAFDPASHKCEMMHNQPAAPMKSMGGPFKTEAEAKSAMASMKECNG
Ga0184644_17005841	3300019269	Groundwater Sediment	MKKYLVAGVMIAAFAAPAFAEQFYVAFDPASHKCEMMHNQPAAPMKSMGGPFKTEAEAKSAMASMKECNG
Ga0206352_112246341	3300020078	Corn, Switchgrass And Miscanthus Rhizosphere	LLASAFIVAFSAPAFAEQFYVAFDPASHKCTMMHDIPGDTMKNMGGPYNSKEEAEKAMAGMEACAK
Ga0213857_10051292	3300022171	Watersheds	MRKYLIAAVLVTAFAGPALAEQFYVAFDPASHKCTMMHSQPAAPMKSMGGPYATEDEAHKAMAGMKDCEG
Ga0213857_10128941	3300022171	Watersheds	MRKYLIAAVLVTAFAGPALAEQFYVAFDPASHKCTMMHSQPTGNMKSMGGPYATEDEANKAMAGM
Ga0213857_10252522	3300022171	Watersheds	MRKYLIAAALVVSFAAPALAEQFYVAFDPASHKCEMMHAQPTGNMKSMGGPYATEAEANKAMAGMKECNG
Ga0213857_10296581	3300022171	Watersheds	LIAAVLVVAFAGPALAEQFYVAFDPASHKCTMMHSQPTGNMKSMGGPYATEDEAHKAMAGMKECEG
Ga0213857_10313231	3300022171	Watersheds	MQKYLIAAALVVSFAAPALAEQFYVAFDPASHKCSMMHSQPGAGMKVMGTYATEAEAHKAMAGMKECEG
Ga0213857_10343741	3300022171	Watersheds	MNRYILAAAFLVALAGPALAEQFYVAFDPASQKCSMMHNQPGSGMKLMGTYATEADAHKAMAGMKECEKG
Ga0210095_10537942	3300025568	Natural And Restored Wetlands	VSKYLIAAALVVAFATPALAEQFYVAFDPASHKCEMMHSQPSGSMKSMGGPYATKAEAHAAMTNMKECN
Ga0207684_114808891	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MKRYLLVGAFVMAFATPALAEQFYVAFDPASHKCSMMHTIPSGSMKNMGGPYKTKAEAHKAMQGMKECTA
Ga0207654_106690082	3300025911	Corn Rhizosphere	MKKYLLATALIVGFVTPALAEQFYVAFDPASHKCSMMHTIPSGSMKNMGGPYKTKAEAIKRLQQVE
Ga0210071_10336291	3300025955	Natural And Restored Wetlands	MQKYLLAAVFVVALAGPAFAEEFYVAFDPASHKCSLMHSQPASPMKSMGKFGTKAEAEKAMGSMKECTAG
Ga0207712_117657751	3300025961	Switchgrass Rhizosphere	MKKYLLAAALIVAFATPAFAEQFYVAFDPASHKCTMMHNQPSGSMKSMGGPYKTEDEANKAMASMKECQG
Ga0207640_116949831	3300025981	Corn Rhizosphere	MKRYLVAGVLVFAFVSPALAEQFYVAFDPASHKCTMMHSQPAAPMKNMGGPFKTEAEAHKAMASMKECEG
Ga0208915_10189541	3300026048	Natural And Restored Wetlands	MQKYLLAAVFVVALAGPAFAEEFYVAFDPASHKCSMMHSQPASPMKSMGKFGTKAEAEKAMASMKECTAG
Ga0207702_107476882	3300026078	Corn Rhizosphere	MQKYLLAAVFVVALAGPALAEEFYVAFDPASHKCSMMHTIPSGSMKNMGGPYKTKAEAHKAMQGMKECTA
Ga0207675_1014164591	3300026118	Switchgrass Rhizosphere	MKRYLVASILVFAFVSPALAEQFHVAFDPASHKCTMMHSQPAAPMKSMGGPFKTEAEAHKAMASMKECEG
Ga0208199_10264271	3300027497	Peatlands Soil	MRKYIVVATLIIGFATPALAEQFYVAFDPASHKCTMMHSQPTGSMKSMGGPYKTEAEAKK
Ga0208042_10465511	3300027568	Peatlands Soil	MRKYIVVATLIIGFATPALAEQFYVAFDPASHKCTMMHSQPTGSMKSMGGPYKTEAEAKKAMAGMKDCAG
Ga0209077_10184081	3300027675	Freshwater Sediment	MKRYLVAGVLVFAFVSPALAEQFYVAFDPASHKMHDDAQPARGTMKSMGGPFKTEAEAHKAMASMKECTS
Ga0209068_101233172	3300027894	Watersheds	MHKYLVAAVLVVAFAGAALAVESGQYYVGFDGKKCSMMTSEPTGSMKKMGGPYKTEAEAHKAMAGMKECQG
Ga0268265_116543131	3300028380	Switchgrass Rhizosphere	RYLIAGVLVFAFVSPALAEQFYVAFDPASHKCTMMHSQPAAPMKSMGGPFKTEAEAHKAMASMKECEG
Ga0268264_101808053	3300028381	Switchgrass Rhizosphere	MKQYLVAAVFVAAFAAPALAEQFYVAFDPASHKCTMMHSEPAAPMKSMGAFKTEAEAHKAMTSMKECQS
Ga0247822_112167581	3300028592	Soil	MKRYLVAGVLVFAFVSPALAEQFYVAFDPASKKCTMMHSQPAAPMKSMGGPFKTEAEAHKAMASMKE
Ga0307504_103489982	3300028792	Soil	ASALIVGIVTPAFAEEFYVAFDPASHKCSMMHTIPSGSMKNMGGPYKTKAEAHKAMQGMKECAA
Ga0307504_103587452	3300028792	Soil	MQKYLIAAALIVSFAAPALAEQFYVAFDPASHKCSMMHSQPGSGMKVMGTYATEAEAHKAMASMKECSE
Ga0307305_103354961	3300028807	Soil	AITPQGASMKKYIVAAAFIVAFVTPAFAEEIYVAFDPASHKCTMMHSQPASPMKSMGKFKTEAEATTAMASMKECQG
Ga0302163_101468361	3300028868	Fen	MQKYLLAAVFVVAMAGPAFAETFYVAFDPASHKCSMMHSQPASPMKMMGKFGTKAEAEKAMGSMKECMAG
Ga0311347_103743292	3300029923	Fen	VSFAAPAFAETFYVAFDPASHKCSMMHSQPAAPMKSMGSFKTEAEAKAAMGKMKECTA
Ga0311337_113131241	3300030000	Fen	MSKYIVAAALVIAFVTPALAEQFYVAFDPASKKCSMMHSQPPAGMKVMGTYGTEAEATKAMGGMKEC
Ga0302286_102027932	3300030047	Fen	MQKYLLAAVFVVAMAGPAFAETFYVAFDPASHKCSMMHSQPASPMKMMGKFGTQAEAEKAMGSMKECTAG
Ga0311349_101362653	3300030294	Fen	MSKYIVAAALVIAFVTPALAEQFYVAFDPASKKCSMMHSQPPAGMKVMGTYGTEAEATKAMGGMKECNPG
Ga0311360_107545531	3300030339	Bog	MQKYLLAAVFVVAMAGPAFAETFYVAFDPASHKCSMMHSQPGAGMKVMGTYATEAEAHKAMAGMKECEG
Ga0308203_10834512	3300030829	Soil	SMKRYLVAGVLVFAFVSPALAEQFYVAFDPASHKCTMMHSEPAAPMKSMGGPFKTEAEAHKAMASMKECTS
Ga0308198_10786481	3300030904	Soil	MKKYIVAAFLIAAFATPALAEQFYVAFDPASHKCTMMHSQPAAPMKSMGAFKTEAEAHKAMTSMKECQS
Ga0308189_102752792	3300031058	Soil	MKKYLIAGVMIAAFATPAFAEQFYVAFDPASHKCEMMHNQPAAPMKSMGGPFKTEAEAKSAMASMKECNG
Ga0308197_103440772	3300031093	Soil	MKKYLVAGVMIAAFAAPAFAEQFYVAFDPASHKCEMMHNQPAAPMKSMGGPFKTEAEAKSAMASMKE
Ga0308187_103002112	3300031114	Soil	MKRYLVAGVLIFAFVSPALAEQFYVAFDPASHKCTMMHSQPAAPMKSMGGPFKTEAEAHKAMASMKECTS
Ga0307497_100354362	3300031226	Soil	ALIVGFVTPALAEQFYVAFDPASHKCSMMHTIPSGSMKNMGGPYKTKAEAHKAMQGMKECTA
Ga0302323_1025484752	3300031232	Fen	DLSMSKYIVSAALVIAFVTPALAEQFYVAFDPASKKCSMMHSQPPAGMKVMGTYGTEAEATKAMGGMKECNPG
Ga0315556_12370292	3300031256	Salt Marsh Sediment	MRKYVLAAVLVAAFATPALAEQFYVAFDPASHKCTMMHNIPGDNMKNMGGPYNSQAEAEKAMAGMEACAK
Ga0307442_100120613	3300031274	Salt Marsh	MKKYFVAAAFVIAFVGPALAEQFYVAFDPASHKCTMMHSQPGSNMKVLGTYGTKAEAHKAMASMKECEA
Ga0307442_10055553	3300031274	Salt Marsh	MRKYVLAAVFVAAFATPALAEQFYVAFDPASHKCTMMHNIPGDNMKNMGGPYNSQAEAEKAMAGMEACAK
Ga0307428_10034133	3300031280	Salt Marsh	MPKYALAAVLVAAFATPALAEQFYVAFDPASHKCTMMHNIPGDNMKNMGGPYNSQAEAEKAMAGMEACAK
Ga0307428_10088803	3300031280	Salt Marsh	MRKYVLAAVLVAAFATPAFAEQFYVAFDPASHKCTMMHSIPGDDMKNMGGPYATEAEAHKAMAGMEACAN
Ga0307429_10234613	3300031368	Salt Marsh	MRKYVLAAVLVAAFATPALAEQFYVAFDPASHKCTMMHSIPGDDMKNMGGPYATEAEAHKAMAGMEACAN
Ga0307429_11623392	3300031368	Salt Marsh	YVLAALLVAAFATPALAEQFYVAFDPASHKCTMMHNIPGDNMKNMGGPYNSQAEAEKAMAGMEACAK
Ga0310886_109940071	3300031562	Soil	MKKYLVAAVLVAAFAGPALAEQFYVAFDPASHKCTMMHSEPAAPMKSMGAFKTEAEA
Ga0315291_106417663	3300031707	Sediment	MRKYLAAAALIVAFATPALAEQFYVAFDPASHKCSMMHSEPAAPMKSMGSFKTEAEATKAMAGMKECQG
Ga0307469_112407771	3300031720	Hardwood Forest Soil	MKRYLVAGVLIFAFVSPALAEQFYVAFDPASKKCTMMHSQPAAPMKSMGGPFKTEAEAHKAMASMKECEG
Ga0307468_1016689892	3300031740	Hardwood Forest Soil	MKKLLIASALMIGFVTPALAEQFYVAFDPASHKCTMMHSIPSGSMKKMGGPYSSRAAARKAMHGMKECTA
Ga0307468_1022994441	3300031740	Hardwood Forest Soil	MKRYLVASILVFAFVSPALAEQFYVAFDPASHKCTMMHSQPAAPMKSMGGPFKPEAEAHKAMASMKECEG
Ga0307473_102934032	3300031820	Hardwood Forest Soil	MKKLLIASALIIGFVTPALAEQFYVAFDPASHKCTMMHSIPSGSMKNMGGPYSSRAAARKAMHGMKECTA
Ga0307473_113259291	3300031820	Hardwood Forest Soil	MKRYLVAGVLVFAFVSPALAEQFYVAFDPASKKCTMMHSQPAAPMKSMGGPFKTEAEAHKAMASMKECEG
Ga0315290_100251623	3300031834	Sediment	MRKYLAAAALIVAFATPALAEQFYVAFDPASHKCSMMHSEPAAPMKSMGSFKTEAEAAKAMAGMKECQG
Ga0310901_101021812	3300031940	Soil	MKKYLLATALIVGIVTPALAEQFYVAFDPASHKCSMMHTIPSGSMKNMGGPYKTKAEAHKAMQGMKECTA
Ga0310897_101541062	3300032003	Soil	IVGFVTPALAEQFYVAFDPASHKCSMMHTIPSGSMKNMGGPYKTKAEAHKAMQGMKECTA
Ga0310906_111174911	3300032013	Soil	LGLGWGQHPRSKSNEALSAGVLVFAFVSPALAEQFYVAFDPASHKCTMMHSQPAAPMKSMGGPFKTEAEANKAMASVKECEG
Ga0315540_100316373	3300032061	Salt Marsh Sediment	MRKYALAAVLVAAFATPALAEQFYVAFDPASHKCTMMHNIPGDNMKNMGGPYNSQAEAEKAMAGMEACAK
Ga0315551_103425182	3300032062	Salt Marsh Sediment	VLAAVFVAAFATPALAEQFYVAFDPASHKCTMMHNIPGDNMKNMGGPYNSQAEAEKAMAGMEACAK
Ga0310890_101351862	3300032075	Soil	LATALIVGFVTPALAEQFYVAFDPASHKCSMMHTIPSGSMKNMGGPYKTKAEAHKAMQGMKECTA
Ga0315277_101900411	3300032118	Sediment	HPGHYPKETTLMRKYLAAAALIVAFATPALAEQFYVAFDPASHKCSMMHSQPAAPMKSMGTYATEAEATKAMAGMKECQG
Ga0315283_1000004270	3300032164	Sediment	TTLMRKYLAAAALIVAFATPALAEQFYVAFDPASHKCSMMHSQPAAPMKSMGTYATEAEATKAMAGMKECQG
Ga0307471_1006537283	3300032180	Hardwood Forest Soil	MKRYLVAGVLVFAFVSPALAEQFYVAFDPASKKCTMMHSQPAAPMKSMGGPFKTEVEAHKAMASMKECEG
Ga0307471_1010856832	3300032180	Hardwood Forest Soil	VFAFVSPALAEQFYVAFDPASKKCTMMHSQPAAPMKSMGGPFKTEAEAHKAMASMKECEG
Ga0335082_112912221	3300032782	Soil	KYLLASAFVVAFSAPAFAEQFYVAFDPASHKCTMMHDIPGDTMKNMGGPYNSKEEAEKAMAGMEACAK
Ga0335078_127152071	3300032805	Soil	MQKCLLAAVFVVALAGPALAEEFYVAFDPASHKCSMMHSQPVSPMKNMGSFATRAEAHKAMGSMKECTAG
Ga0335077_114491652	3300033158	Soil	MQKCLLAAVFVVALAGPALAEEFYVAFDPASHKCSMMHSQPVSPMKNMGSFVTRAEAHKAMGSMKECTAG
Ga0326726_112541512	3300033433	Peat Soil	MKKYLLATTLIVGFVTPALAEQFYVAFDPASHKCSMMHTIPSGSMKNMGGPYKTKAEAHKAMQGMKECTA
Ga0247830_101489033	3300033551	Soil	MRKCLVAAVLIGAFSAPAFAEEIYVAFDPASHKCTMMHSQPASGMKVMGTFKSEAEAKAAMAKMKDCEG
Ga0247830_112177721	3300033551	Soil	MKRYLVAGVLVFAFVSPALAEQFYVAFDPASKKCTMMHSQPAAPMKSMGGPFKTEAEAHKAMASMKECTS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F038774

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences