Metagenome / Metatranscriptome Family F038795

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F038795
Family Type	Metagenome / Metatranscriptome
Number of Sequences	165
Average Sequence Length	41 residues
Representative Sequence	GLYQRGWENYLSLLTRYWQPYLDGRTTFDDAIAHMVSAL
Number of Associated Samples	138
Number of Associated Scaffolds	165

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.61 %
% of genes near scaffold ends (potentially truncated)	96.36 %
% of genes from short scaffolds (< 2000 bps)	89.70 %
Associated GOLD sequencing projects	130
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.56

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (92.727 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (28.485 % of family members)
Environment Ontology (ENVO)	Unclassified (33.939 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (44.848 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 47.76% β-sheet: 0.00% Coil/Unstructured: 52.24%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.56
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.56
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 165 Family Scaffolds
PF02621	VitK2_biosynth	20.00
PF13474	SnoaL_3	4.24
PF07969	Amidohydro_3	4.24
PF12390	Se-cys_synth_N	2.42
PF03551	PadR	1.82
PF13620	CarboxypepD_reg	1.82
PF08818	DUF1801	1.82
PF00285	Citrate_synt	1.82
PF01019	G_glu_transpept	1.21
PF13594	Obsolete Pfam Family	1.21
PF07843	DUF1634	1.21
PF01433	Peptidase_M1	1.21
PF01925	TauE	0.61
PF02585	PIG-L	0.61
PF00106	adh_short	0.61
PF04255	DUF433	0.61
PF00582	Usp	0.61
PF16757	Fucosidase_C	0.61
PF07681	DoxX	0.61
PF07609	DUF1572	0.61
PF04226	Transgly_assoc	0.61
PF01609	DDE_Tnp_1	0.61
PF00754	F5_F8_type_C	0.61
PF05726	Pirin_C	0.61
PF13673	Acetyltransf_10	0.61
PF00990	GGDEF	0.61
PF07676	PD40	0.61
PF14020	DUF4236	0.61
PF10282	Lactonase	0.61
PF10017	Methyltransf_33	0.61
PF12840	HTH_20	0.61
PF12704	MacB_PCD	0.61
PF08241	Methyltransf_11	0.61
PF01432	Peptidase_M3	0.61

COG ID	Name	Functional Category	% Frequency in 165 Family Scaffolds
COG1427	Chorismate dehydratase (menaquinone biosynthesis, futalosine pathway)	Coenzyme transport and metabolism [H]	20.00
COG0372	Citrate synthase	Energy production and conversion [C]	1.82
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	1.82
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	1.82
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	1.82
COG4430	Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family	Function unknown [S]	1.82
COG5646	Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)	Posttranslational modification, protein turnover, chaperones [O]	1.82
COG5649	Uncharacterized conserved protein, DUF1801 domain	Function unknown [S]	1.82
COG0308	Aminopeptidase N, contains DUF3458 domain	Amino acid transport and metabolism [E]	1.21
COG0405	Gamma-glutamyltranspeptidase	Amino acid transport and metabolism [E]	1.21
COG4272	Uncharacterized membrane protein	Function unknown [S]	1.21
COG0339	Zn-dependent oligopeptidase, M3 family	Posttranslational modification, protein turnover, chaperones [O]	0.61
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	0.61
COG1164	Oligoendopeptidase F	Amino acid transport and metabolism [E]	0.61
COG1741	Redox-sensitive bicupin YhaK, pirin superfamily	General function prediction only [R]	0.61
COG2120	N-acetylglucosaminyl deacetylase, LmbE family	Carbohydrate transport and metabolism [G]	0.61
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	0.61
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	0.61
COG2442	Predicted antitoxin component of a toxin-antitoxin system, DUF433 family	Defense mechanisms [V]	0.61
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.61
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.61
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.61
COG4270	Uncharacterized membrane protein	Function unknown [S]	0.61
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.61
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.61
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.61

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	92.73 %
Unclassified	root	N/A	7.27 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	92.73 %
Unclassified	root	N/A	7.27 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	92.73 %
Unclassified	root	N/A	7.27 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	39.39 %
Unclassified	root	N/A	7.27 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.45 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.82 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	14.55 %
Unclassified	root	N/A	7.27 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4.24 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.21 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	1.21 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.61 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.61 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.55 %
Unclassified	root	N/A	7.27 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	3.64 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1.21 %
Cellvibrionales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales	0.61 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.61 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.61 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.55 %
Unclassified	root	N/A	7.27 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3.64 %
Microbulbiferaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Microbulbiferaceae	0.61 %
unclassified Burkholderiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales	0.61 %
Chloroflexi bacterium ADurb.Bin325	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium ADurb.Bin325	0.61 %
unclassified Cyanobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria	0.61 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.55 %
Unclassified	root	N/A	7.27 %
Cyanobacteria bacterium 13_1_20CM_4_61_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	0.61 %
Burkholderiales bacterium JOSHI_001	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium JOSHI_001	0.61 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.61 %
Microbulbifer	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Microbulbiferaceae → Microbulbifer	0.61 %
Chloroflexi bacterium ADurb.Bin325	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium ADurb.Bin325	0.61 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.55 %
Unclassified	root	N/A	7.27 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.61 %
Microbulbifer variabilis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Microbulbiferaceae → Microbulbifer → Microbulbifer variabilis	0.61 %
Cyanobacteria bacterium 13_1_20CM_4_61_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	0.61 %
Burkholderiales bacterium JOSHI_001	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium JOSHI_001	0.61 %
Chloroflexi bacterium ADurb.Bin325	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium ADurb.Bin325	0.61 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000651\|AP72_2010_repI_A10DRAFT_1021783	All Organisms → cellular organisms → Bacteria	819	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10128248	All Organisms → cellular organisms → Bacteria → Acidobacteria	529	Open in IMG/M
3300002245\|JGIcombinedJ26739_100808681	All Organisms → cellular organisms → Bacteria	818	Open in IMG/M
3300004091\|Ga0062387_100540456	All Organisms → cellular organisms → Bacteria → Proteobacteria	822	Open in IMG/M
3300004092\|Ga0062389_102672342	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	665	Open in IMG/M
3300005172\|Ga0066683_10246236	All Organisms → cellular organisms → Bacteria → Proteobacteria	1108	Open in IMG/M
3300005332\|Ga0066388_101933381	All Organisms → cellular organisms → Bacteria	1055	Open in IMG/M
3300005343\|Ga0070687_101120916	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300005447\|Ga0066689_10655632	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300005518\|Ga0070699_101957004	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300005526\|Ga0073909_10657469	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300005537\|Ga0070730_10323714	All Organisms → cellular organisms → Bacteria	1006	Open in IMG/M
3300005538\|Ga0070731_10026202	All Organisms → cellular organisms → Bacteria	3980	Open in IMG/M
3300005541\|Ga0070733_11047308	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Microbulbiferaceae → Microbulbifer → Microbulbifer variabilis	547	Open in IMG/M
3300005552\|Ga0066701_10264623	All Organisms → cellular organisms → Bacteria	1064	Open in IMG/M
3300005553\|Ga0066695_10203515	All Organisms → cellular organisms → Bacteria → Proteobacteria	1242	Open in IMG/M
3300005569\|Ga0066705_10674981	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300005575\|Ga0066702_10300807	All Organisms → cellular organisms → Bacteria → Proteobacteria	978	Open in IMG/M
3300005586\|Ga0066691_10287004	All Organisms → cellular organisms → Bacteria → Acidobacteria	970	Open in IMG/M
3300005602\|Ga0070762_11110201	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300005718\|Ga0068866_10200956	All Organisms → cellular organisms → Bacteria	1191	Open in IMG/M
3300005764\|Ga0066903_103036455	All Organisms → cellular organisms → Bacteria	909	Open in IMG/M
3300005842\|Ga0068858_100051650	All Organisms → cellular organisms → Bacteria	3803	Open in IMG/M
3300005843\|Ga0068860_101629627	All Organisms → cellular organisms → Bacteria → Acidobacteria	667	Open in IMG/M
3300006059\|Ga0075017_100847650	All Organisms → cellular organisms → Bacteria	708	Open in IMG/M
3300006086\|Ga0075019_10073401	All Organisms → cellular organisms → Bacteria	1943	Open in IMG/M
3300006162\|Ga0075030_101290386	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300006174\|Ga0075014_100696443	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	590	Open in IMG/M
3300006176\|Ga0070765_100917659	All Organisms → cellular organisms → Bacteria	828	Open in IMG/M
3300006176\|Ga0070765_102217004	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300006794\|Ga0066658_10015617	All Organisms → cellular organisms → Bacteria	2883	Open in IMG/M
3300006794\|Ga0066658_10820950	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300006797\|Ga0066659_10811897	All Organisms → cellular organisms → Bacteria → Proteobacteria	775	Open in IMG/M
3300006893\|Ga0073928_10124097	All Organisms → cellular organisms → Bacteria	2123	Open in IMG/M
3300007265\|Ga0099794_10753033	All Organisms → cellular organisms → Bacteria → Acidobacteria	520	Open in IMG/M
3300007788\|Ga0099795_10499823	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300009038\|Ga0099829_10493679	All Organisms → cellular organisms → Bacteria	1016	Open in IMG/M
3300009038\|Ga0099829_10578294	All Organisms → cellular organisms → Bacteria	934	Open in IMG/M
3300009038\|Ga0099829_10706535	All Organisms → cellular organisms → Bacteria	838	Open in IMG/M
3300009038\|Ga0099829_10757508	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	807	Open in IMG/M
3300009088\|Ga0099830_10741349	All Organisms → cellular organisms → Bacteria	809	Open in IMG/M
3300009088\|Ga0099830_10891831	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	735	Open in IMG/M
3300009089\|Ga0099828_10501198	All Organisms → cellular organisms → Bacteria → Proteobacteria	1095	Open in IMG/M
3300009089\|Ga0099828_11299702	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300009143\|Ga0099792_10280236	All Organisms → cellular organisms → Bacteria → Acidobacteria	982	Open in IMG/M
3300009143\|Ga0099792_10574438	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	715	Open in IMG/M
3300009143\|Ga0099792_11189364	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300009545\|Ga0105237_10395706	All Organisms → cellular organisms → Bacteria	1386	Open in IMG/M
3300009553\|Ga0105249_13424946	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300010043\|Ga0126380_11017330	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300010046\|Ga0126384_10137275	All Organisms → cellular organisms → Bacteria → Acidobacteria	1865	Open in IMG/M
3300010047\|Ga0126382_11785559	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300010303\|Ga0134082_10104944	All Organisms → cellular organisms → Bacteria	1120	Open in IMG/M
3300010343\|Ga0074044_10869073	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	589	Open in IMG/M
3300010358\|Ga0126370_10786557	Not Available	847	Open in IMG/M
3300010360\|Ga0126372_10403483	All Organisms → cellular organisms → Bacteria → Acidobacteria	1248	Open in IMG/M
3300010361\|Ga0126378_10250200	All Organisms → cellular organisms → Bacteria	1865	Open in IMG/M
3300010361\|Ga0126378_10638718	All Organisms → cellular organisms → Bacteria	1178	Open in IMG/M
3300010366\|Ga0126379_12424512	All Organisms → cellular organisms → Bacteria → Acidobacteria	624	Open in IMG/M
3300010375\|Ga0105239_12060818	All Organisms → cellular organisms → Bacteria → Acidobacteria	663	Open in IMG/M
3300010397\|Ga0134124_11581357	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300010880\|Ga0126350_10025570	All Organisms → cellular organisms → Bacteria	679	Open in IMG/M
3300011269\|Ga0137392_10294452	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1341	Open in IMG/M
3300011271\|Ga0137393_10993381	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M
3300012096\|Ga0137389_10730910	All Organisms → cellular organisms → Bacteria	850	Open in IMG/M
3300012199\|Ga0137383_10781878	All Organisms → cellular organisms → Bacteria → Acidobacteria	697	Open in IMG/M
3300012202\|Ga0137363_10268853	All Organisms → cellular organisms → Bacteria	1391	Open in IMG/M
3300012205\|Ga0137362_10556966	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	990	Open in IMG/M
3300012210\|Ga0137378_10459245	All Organisms → cellular organisms → Bacteria	1179	Open in IMG/M
3300012361\|Ga0137360_10207136	All Organisms → cellular organisms → Bacteria → Acidobacteria	1591	Open in IMG/M
3300012363\|Ga0137390_11836571	All Organisms → cellular organisms → Bacteria → Acidobacteria	536	Open in IMG/M
3300012582\|Ga0137358_10414864	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	910	Open in IMG/M
3300012683\|Ga0137398_11169381	All Organisms → cellular organisms → Bacteria → Acidobacteria	527	Open in IMG/M
3300012685\|Ga0137397_10022852	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4411	Open in IMG/M
3300012917\|Ga0137395_11234268	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	521	Open in IMG/M
3300012918\|Ga0137396_11025938	Not Available	595	Open in IMG/M
3300012918\|Ga0137396_11278092	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	511	Open in IMG/M
3300012924\|Ga0137413_10970753	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300012924\|Ga0137413_11291788	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium ADurb.Bin325	585	Open in IMG/M
3300012925\|Ga0137419_10356517	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1133	Open in IMG/M
3300012925\|Ga0137419_11737563	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300012927\|Ga0137416_10057132	All Organisms → cellular organisms → Bacteria → Acidobacteria	2767	Open in IMG/M
3300012927\|Ga0137416_11215237	All Organisms → cellular organisms → Bacteria	679	Open in IMG/M
3300012927\|Ga0137416_11314158	All Organisms → cellular organisms → Bacteria	653	Open in IMG/M
3300012927\|Ga0137416_11697357	All Organisms → cellular organisms → Bacteria → Acidobacteria	576	Open in IMG/M
3300012944\|Ga0137410_10638467	All Organisms → cellular organisms → Bacteria → Acidobacteria	883	Open in IMG/M
3300013306\|Ga0163162_11126243	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium JOSHI_001	890	Open in IMG/M
3300015245\|Ga0137409_10261342	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1534	Open in IMG/M
3300015357\|Ga0134072_10159156	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300015372\|Ga0132256_101183187	All Organisms → cellular organisms → Bacteria	878	Open in IMG/M
3300016371\|Ga0182034_10357193	All Organisms → cellular organisms → Bacteria	1188	Open in IMG/M
3300017975\|Ga0187782_10780874	All Organisms → cellular organisms → Bacteria	738	Open in IMG/M
3300017994\|Ga0187822_10084119	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	948	Open in IMG/M
3300019883\|Ga0193725_1137675	Not Available	538	Open in IMG/M
3300020170\|Ga0179594_10090743	All Organisms → cellular organisms → Bacteria	1088	Open in IMG/M
3300020579\|Ga0210407_11026347	Not Available	628	Open in IMG/M
3300020579\|Ga0210407_11147826	Not Available	587	Open in IMG/M
3300020582\|Ga0210395_11042813	Not Available	605	Open in IMG/M
3300020583\|Ga0210401_10199990	All Organisms → cellular organisms → Bacteria	1856	Open in IMG/M
3300021046\|Ga0215015_10310171	All Organisms → cellular organisms → Bacteria	758	Open in IMG/M
3300021170\|Ga0210400_11282997	All Organisms → cellular organisms → Bacteria → Acidobacteria	587	Open in IMG/M
3300021178\|Ga0210408_10273103	All Organisms → cellular organisms → Bacteria	1347	Open in IMG/M
3300021401\|Ga0210393_11403806	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	558	Open in IMG/M
3300021420\|Ga0210394_10117909	Not Available	2298	Open in IMG/M
3300021420\|Ga0210394_10601813	All Organisms → cellular organisms → Bacteria	966	Open in IMG/M
3300021420\|Ga0210394_10991098	Not Available	728	Open in IMG/M
3300021432\|Ga0210384_10036817	All Organisms → cellular organisms → Bacteria → Acidobacteria	4523	Open in IMG/M
3300021433\|Ga0210391_11538767	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	509	Open in IMG/M
3300021474\|Ga0210390_10500006	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1024	Open in IMG/M
3300021478\|Ga0210402_10270776	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1570	Open in IMG/M
3300021478\|Ga0210402_10536613	All Organisms → cellular organisms → Bacteria	1086	Open in IMG/M
3300022532\|Ga0242655_10211592	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	598	Open in IMG/M
3300022722\|Ga0242657_1013248	All Organisms → cellular organisms → Bacteria → Acidobacteria	1444	Open in IMG/M
3300024222\|Ga0247691_1020569	All Organisms → cellular organisms → Bacteria	1035	Open in IMG/M
3300024288\|Ga0179589_10571259	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	528	Open in IMG/M
3300024330\|Ga0137417_1458320	All Organisms → cellular organisms → Bacteria	6374	Open in IMG/M
3300024330\|Ga0137417_1510361	All Organisms → cellular organisms → Bacteria → Acidobacteria	3803	Open in IMG/M
3300025439\|Ga0208323_1082469	All Organisms → cellular organisms → Bacteria → Acidobacteria	533	Open in IMG/M
3300025899\|Ga0207642_10118578	All Organisms → cellular organisms → Bacteria → Acidobacteria	1361	Open in IMG/M
3300025912\|Ga0207707_10775796	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	800	Open in IMG/M
3300025915\|Ga0207693_10063125	All Organisms → cellular organisms → Bacteria → Acidobacteria	2902	Open in IMG/M
3300025918\|Ga0207662_10559328	All Organisms → cellular organisms → Bacteria	793	Open in IMG/M
3300026301\|Ga0209238_1072030	All Organisms → cellular organisms → Bacteria → Acidobacteria	1214	Open in IMG/M
3300026309\|Ga0209055_1060015	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1611	Open in IMG/M
3300026333\|Ga0209158_1215248	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	665	Open in IMG/M
3300026334\|Ga0209377_1323910	All Organisms → cellular organisms → Bacteria → Acidobacteria	516	Open in IMG/M
3300026374\|Ga0257146_1070423	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300026550\|Ga0209474_10049417	All Organisms → cellular organisms → Bacteria	3018	Open in IMG/M
3300027671\|Ga0209588_1192401	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	638	Open in IMG/M
3300027729\|Ga0209248_10160298	All Organisms → cellular organisms → Bacteria → Acidobacteria	670	Open in IMG/M
3300027738\|Ga0208989_10204629	Not Available	652	Open in IMG/M
3300027862\|Ga0209701_10062758	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2365	Open in IMG/M
3300027862\|Ga0209701_10196944	Not Available	1203	Open in IMG/M
3300027862\|Ga0209701_10431031	All Organisms → cellular organisms → Bacteria	729	Open in IMG/M
3300027889\|Ga0209380_10403594	All Organisms → cellular organisms → Bacteria	801	Open in IMG/M
3300027903\|Ga0209488_10698779	All Organisms → cellular organisms → Bacteria → Acidobacteria	727	Open in IMG/M
3300027915\|Ga0209069_10511944	All Organisms → cellular organisms → Bacteria → Acidobacteria	678	Open in IMG/M
3300028047\|Ga0209526_10430535	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	871	Open in IMG/M
3300028146\|Ga0247682_1008918	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1728	Open in IMG/M
3300028775\|Ga0302231_10218845	All Organisms → cellular organisms → Bacteria	796	Open in IMG/M
3300028789\|Ga0302232_10410176	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300028808\|Ga0302228_10270127	All Organisms → cellular organisms → Bacteria	764	Open in IMG/M
3300030053\|Ga0302177_10322339	All Organisms → cellular organisms → Bacteria	820	Open in IMG/M
3300030056\|Ga0302181_10503255	All Organisms → cellular organisms → Bacteria → Acidobacteria	510	Open in IMG/M
3300030841\|Ga0075384_10857139	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300031128\|Ga0170823_14578589	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300031231\|Ga0170824_121424243	All Organisms → cellular organisms → Bacteria → Acidobacteria	633	Open in IMG/M
3300031251\|Ga0265327_10288737	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	724	Open in IMG/M
3300031545\|Ga0318541_10825999	All Organisms → cellular organisms → Bacteria → Acidobacteria	517	Open in IMG/M
3300031718\|Ga0307474_10766765	All Organisms → cellular organisms → Bacteria	763	Open in IMG/M
3300031720\|Ga0307469_10460650	All Organisms → cellular organisms → Bacteria → Acidobacteria	1103	Open in IMG/M
3300031753\|Ga0307477_10323149	All Organisms → cellular organisms → Bacteria → Acidobacteria	1063	Open in IMG/M
3300031754\|Ga0307475_10082311	All Organisms → cellular organisms → Bacteria	2485	Open in IMG/M
3300031754\|Ga0307475_10267579	All Organisms → cellular organisms → Bacteria	1370	Open in IMG/M
3300031764\|Ga0318535_10566675	All Organisms → cellular organisms → Bacteria → Acidobacteria	503	Open in IMG/M
3300031823\|Ga0307478_11019855	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	691	Open in IMG/M
3300031912\|Ga0306921_11412249	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	765	Open in IMG/M
3300031962\|Ga0307479_10368705	All Organisms → cellular organisms → Bacteria	1420	Open in IMG/M
3300031962\|Ga0307479_11194964	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	724	Open in IMG/M
3300032090\|Ga0318518_10158325	All Organisms → cellular organisms → Bacteria	1152	Open in IMG/M
3300032174\|Ga0307470_10365070	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1007	Open in IMG/M
3300032180\|Ga0307471_100196239	All Organisms → cellular organisms → Bacteria	2013	Open in IMG/M
3300032955\|Ga0335076_10431563	All Organisms → cellular organisms → Bacteria	1201	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.94%
Host-Associated	Host-Associated	6.06%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.27%
Aquatic	Environmental → Aquatic	6.67%
Plants	Host-Associated → Plants	6.06%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.24%
Freshwater	Environmental → Aquatic → Freshwater	3.03%
Sediment	Environmental → Aquatic → Sediment	3.03%
Peat	Environmental → Terrestrial → Peat	3.03%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.03%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.03%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.61%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	73.33%
Loam	Environmental → Terrestrial → Soil → Loam	8.48%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.03%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.03%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.03%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.03%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.82%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.21%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.61%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	39.39%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	24.24%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.70%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.45%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.03%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.03%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.03%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.03%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.42%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.21%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.61%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.61%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.61%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	28.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	9.09%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	6.06%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.85%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.03%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	3.03%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.42%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.42%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.42%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.82%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.21%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.21%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.21%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.21%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.21%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.21%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.21%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.21%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.21%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.21%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.61%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.61%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.61%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.61%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.61%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.61%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.61%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.61%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.61%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.61%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.61%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.61%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.61%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000651	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A10	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300019883	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300022532	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024222	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK32	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025439	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_100 (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026374	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-A	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027729	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027738	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028146	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK23	Environmental	Open in IMG/M
3300028775	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_2	Environmental	Open in IMG/M
3300028789	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_3	Environmental	Open in IMG/M
3300028808	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_2	Environmental	Open in IMG/M
3300030053	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_2	Environmental	Open in IMG/M
3300030056	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_3	Environmental	Open in IMG/M
3300030841	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA9 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031251	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG	Host-Associated	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AP72_2010_repI_A10DRAFT_10217833	3300000651	Forest Soil	REGLYRRGWENYLRILAQYWQPYLDGRVDFSDAVAHMVSAL*
AF_2010_repII_A001DRAFT_101282482	3300000793	Forest Soil	MLRFHRGYDTYAFREGLYQRGWKSYLELLQRFWQPYLDGKASFDDAIARMVSSL*
JGIcombinedJ26739_1008086812	3300002245	Forest Soil	YAMREGLYQRGWENYLALLNRYWQPYLEGRATFDDAIAHMASAL*
Ga0062387_1005404561	3300004091	Bog Forest Soil	LREGLYQRGWNDYYKLLQKFWQPYLDGTASFDDAIARMVSSL*
Ga0062389_1026723422	3300004092	Bog Forest Soil	IREGLYARGWDDYLPLLTRFWQPYLDGHASFDDAIARMVSSL*
Ga0066683_102462361	3300005172	Soil	YAVREGLYQRGWKNYLELLQRFWQPYLDGKATFDDAIARMVSSL*
Ga0066388_1019333812	3300005332	Tropical Forest Soil	LESYKPYAMREGLYRRGWERYLELLTTFWQPYLDNRETFDDAIARMVSAL*
Ga0070687_1011209161	3300005343	Switchgrass Rhizosphere	EGLYKRGWENYLRVLTQYWQPYLDGRVDFSDAVAHMVSAL*
Ga0066689_106556322	3300005447	Soil	VREGLYKRGWENYLRVLTQYWQPYLDGKVTFEDSIAHMVSAL*
Ga0070699_1019570042	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	EGLYQRGWENYLQLLTRYWQPYLESRVTFDDAIAHMVSAL*
Ga0073909_106574692	3300005526	Surface Soil	PYALREGLYERGWKNYLDVLQRFWQPYLDGHATFSDAIARMVSSL*
Ga0070730_103237143	3300005537	Surface Soil	TGYDTYAFREGLYQRGWKNYLELLQRFWQPYLDGKATFDDAIARMVSSL*
Ga0070731_100262024	3300005538	Surface Soil	KRGWENYLRILTQFWQPYLDGRVEFSDAIAHMVSAL*
Ga0070733_110473081	3300005541	Surface Soil	TPYAVRERLFQRGWDQYLKLLERFWQPYLDGNVTFDDAIAHMVSAL*
Ga0066701_102646232	3300005552	Soil	REGLYQRGWNEYFKLLQKFWQPYLDGRASFDDAIARMVSSL*
Ga0066695_102035151	3300005553	Soil	VREGLYQRGWKNYLELLQRFWQPYLDGKATFDDAIARMVSSL*
Ga0066705_106749811	3300005569	Soil	EGLYQRGWNEYFKLLQKFWQPYLDGRASFDDAIARMVSSL*
Ga0066702_103008071	3300005575	Soil	YQRGWKSYLELLQRFWQPYLDGKATFDDAIARMVSSL*
Ga0066691_102870041	3300005586	Soil	GWEDYLRVLTEYWQPYLDGKQSFDDAVAHMVSAL*
Ga0070762_111102011	3300005602	Soil	LYQRGWNDYYKLLQRFWQPYLNGQATFDDAVARMVSQL*
Ga0068866_102009561	3300005718	Miscanthus Rhizosphere	YQRGWDNYLSLLRRFWQPYLDGKASFDDAIAHMVSAL*
Ga0066903_1030364552	3300005764	Tropical Forest Soil	LYKRGWQDYLRVLTEFWQPYLDGKASFDDAIAHMVSAL*
Ga0068858_1000516505	3300005842	Switchgrass Rhizosphere	AVREGLYKRGWENYLRVLTQYWQPYLDGRVEFSDAVAHMVSAL*
Ga0068860_1016296271	3300005843	Switchgrass Rhizosphere	GWENYLRILTQYWQPYLDGRVDFSDAVAHMVSAL*
Ga0075017_1008476502	3300006059	Watersheds	QRGWEDYLHLLTTFWQPYLDGRVTFEDAIAHMVSAL*
Ga0075019_100734012	3300006086	Watersheds	GWSDYYKLLQKFWQPYLDGTATFDDAIARMVSAL*
Ga0075030_1012903862	3300006162	Watersheds	YTRGWDAYLKLLTRFWQPYLDGKSSFDDAIARLVSAL*
Ga0075014_1006964432	3300006174	Watersheds	YERGWKDYLELLTRFWQPYLDNKATFDDAIARMVSAL*
Ga0070765_1009176591	3300006176	Soil	EGLYERGWDDYLKLLTRFWQPYLDGRSSFDDAIARMVSSL*
Ga0070765_1022170041	3300006176	Soil	YAIREGLYERGWKDYLQLLSRFWQPYLDNKSTFDDAIARMVSAL*
Ga0066658_100156171	3300006794	Soil	YQRGWNEYFKLLQKFWQPYLDGHASFDDAIARMDSSL*
Ga0066658_108209501	3300006794	Soil	GLYQRGWNDYFKLLQKFWQPYLDGSASFDDAIARMVSSL*
Ga0066659_108118972	3300006797	Soil	LYKRGWENYLRVLIQYWQPYLDGSATYDDAIAHMVSAL*
Ga0073928_101240974	3300006893	Iron-Sulfur Acid Spring	FRERLYQRGWDDYLKLLERFWQPYLDGTATFDDAIAHIVSAL*
Ga0099794_107530331	3300007265	Vadose Zone Soil	GLYERGWKNYLDVLQRFWQPYLDGRATFSDAIARMVSSL*
Ga0099795_104998232	3300007788	Vadose Zone Soil	GWQDYLRVLTEYWQPYLDGKQSFDDAVAHMVSAL*
Ga0099829_104936791	3300009038	Vadose Zone Soil	LREGLYQRGWNDYFKLLQKFWQPYLDGRASFDDAVARMVSSL*
Ga0099829_105782943	3300009038	Vadose Zone Soil	PYAKREGLYQRGWENYLQLLTRYWQPYLDGQTTFDNAIAHMVSAL*
Ga0099829_107065351	3300009038	Vadose Zone Soil	PYAKREGLYQRGWENYLQLLIRYWQPYLDGTVTFDNAIAHMVSAL*
Ga0099829_107575083	3300009038	Vadose Zone Soil	PYAKREGLYQRGWENYLQLLTRYWQPYLDGQTTFDNAIAHIVSAL*
Ga0099830_107413492	3300009088	Vadose Zone Soil	YAVREGLYQRGWNDYFKLLQKFWQPYLDGSASFDDAIARMVSSL*
Ga0099830_108918311	3300009088	Vadose Zone Soil	REGLYKRGWDEYLKLLNRFWQPYLDNKVTFDDAIARMVSAQ*
Ga0099828_105011981	3300009089	Vadose Zone Soil	LYTRGWSGYLLLLERFWQPYLDGKTDFDAAIARMVSSL*
Ga0099828_112997021	3300009089	Vadose Zone Soil	EGLYTRGWSGYLLLLERFWQPYLDGKTDFDAAIARMVSSL*
Ga0099792_102802362	3300009143	Vadose Zone Soil	YAKREGLYQRGWESYLQLLTLYWQPYLDGRVTFDNAIAHIVSAL*
Ga0099792_105744381	3300009143	Vadose Zone Soil	TPYAKREGLYQRGWENYLSLLNRYWQPYLQGRSTFDDAIARMVSAL*
Ga0099792_111893641	3300009143	Vadose Zone Soil	ALREGLYQRGWNDYFKLLQRFWQPYLDGTATFDDAIARMVSSL*
Ga0105237_103957062	3300009545	Corn Rhizosphere	YEPYAVRERLYQRGWDEYLKLLERFWQPYLDGNVTFDDAIAHMVSAL*
Ga0105249_134249461	3300009553	Switchgrass Rhizosphere	RGWDNYLSLLRRFWQPYLDGKASFDDAIAHMVSAL*
Ga0126380_110173302	3300010043	Tropical Forest Soil	YMPYAVRERLYQRGWDEYLKLLERFWQPYLDGQATFDDAIAHMVSAL*
Ga0126384_101372751	3300010046	Tropical Forest Soil	RGWENYLRVLNDFWQPYLDGKTSFDDAIAHMVSAL*
Ga0126382_117855591	3300010047	Tropical Forest Soil	QIENYLRVLNDFWQPYLDGKTSFDDAIAHMVSAL*
Ga0134082_101049441	3300010303	Grasslands Soil	GLYQRGWNEYFKLLQKFWQPYLDGRASFDDAIARMVSSL*
Ga0074044_108690731	3300010343	Bog Forest Soil	EGLYERGWKDYLQLLTRFWQPYLDNKSTFDDSIARMVSAL*
Ga0126370_107865572	3300010358	Tropical Forest Soil	LYQRGWDQYLKLLTRFWQPYLEGKSTFDDAIARMVSAL*
Ga0126372_104034831	3300010360	Tropical Forest Soil	YAVREGLYKRGWQDYLRVLNDFWQPYLDGKTSFDDAIAHMVSAL*
Ga0126378_102502003	3300010361	Tropical Forest Soil	YQRGWKNYLELLQRFWQPYLDGKATFDDAIARMVSSL*
Ga0126378_106387182	3300010361	Tropical Forest Soil	YAFREGLYQRGWKSYLELLQRFWQPYLDGKASFDDAIARMVSSL*
Ga0126379_124245122	3300010366	Tropical Forest Soil	VREDLYKRGWENYLRILTQYWQPYLDGRVDFSDAVAHMVSAL*
Ga0105239_120608182	3300010375	Corn Rhizosphere	NGEYTPYPVRERLYQRGWDEYLKLLERFWQPYLDGNVTFDDAIAHMVSAL*
Ga0134124_115813571	3300010397	Terrestrial Soil	KRGWQNYLRVLTQYWQPYLDGRVEFSDAIAHMVSAL*
Ga0126350_100255701	3300010880	Boreal Forest Soil	YQRGWDGYFQLLTKYWQPYLNGTVPFDDAIARMVSSL*
Ga0137392_102944521	3300011269	Vadose Zone Soil	YAKREGLYQRGWENYLSLLTHYWQPYLQGRTTFDDAIAHMVSAL*
Ga0137393_109933811	3300011271	Vadose Zone Soil	GLYQRGWSDYFKLLQKFWQPYLDGTASFDDAIARMVSSL*
Ga0137389_107309102	3300012096	Vadose Zone Soil	QRGWNDYFKLLQKFWQPYLDGTASFDDAIARMVSSL*
Ga0137383_107818781	3300012199	Vadose Zone Soil	PYAVREGLYKRGWQDYLRVLTEYWQPYLDGKQSFDDAVAHMVSAL*
Ga0137363_102688531	3300012202	Vadose Zone Soil	RGWKNYLDVLQRFWQPYLDGRATFSDAIARMVSSL*
Ga0137362_105569661	3300012205	Vadose Zone Soil	YKRGWENYLRILTEYWQPYLDGRVTFDDAIAHMVSAL*
Ga0137378_104592451	3300012210	Vadose Zone Soil	EGLYKRGWENYLRLLTEYWQPYLDGRVTFDDAIAHMVSAL*
Ga0137360_102071361	3300012361	Vadose Zone Soil	KREGLYQRGWENYLSLLNRYWQPYLQGRSTFDDAIARMVSAL*
Ga0137390_118365711	3300012363	Vadose Zone Soil	YALREGLYQRGWNDYFKLLQKFWQPYLDGTASFDDAIARMVSSL*
Ga0137358_104148643	3300012582	Vadose Zone Soil	YRRGWENYLQILTRYWQPYLEGRVTFDDAIAHMVSAL*
Ga0137398_111693811	3300012683	Vadose Zone Soil	YAVREGLYQRGWSDYFKLLQKFWQPYLDGTASFDDAIARMVSSL*
Ga0137397_100228521	3300012685	Vadose Zone Soil	GWNDFFKMLQRFWQPYLDGTATFDDAIARMVSSL*
Ga0137395_112342681	3300012917	Vadose Zone Soil	AKREGLYQRGWENYLQILTRYWQPYLEGHVPFDDAIAHMVSAL*
Ga0137396_110259381	3300012918	Vadose Zone Soil	YTRGWDAYLKLLTTFWQPYLDGKSTFDDAIARMVSAL*
Ga0137396_112780921	3300012918	Vadose Zone Soil	EGLYQRGWENYLSLLTRYWQPYLNGRTTFDDAIAHMVSAL*
Ga0137413_109707531	3300012924	Vadose Zone Soil	LYKRGWENYLRLLTEYWQPYLDGRVPFDDAIAHMVSAL*
Ga0137413_112917881	3300012924	Vadose Zone Soil	YKRGWEDYLRVLTQYWQPYLDGNVSYDDAIAHMVSAL*
Ga0137419_103565173	3300012925	Vadose Zone Soil	YQRGWENYLSLLNRYWQPYLQGRSTFDDAIARMVSAL*
Ga0137419_117375631	3300012925	Vadose Zone Soil	RGWENYLRLLTEYWQPYLDGRVTFDDAIAHMVSAL*
Ga0137416_100571322	3300012927	Vadose Zone Soil	LYQRGWTDYFKLLQKFWQPYLDGGATFDDAIARMVSSL*
Ga0137416_112152371	3300012927	Vadose Zone Soil	REGLYQRGWNDYFKLLQKFWQPYLDGRASFDDAIARMVSSL*
Ga0137416_113141582	3300012927	Vadose Zone Soil	EGLYKRGWQDYLRVLTEYWQPYLDGKQSFDDAVAHMVSAL*
Ga0137416_116973572	3300012927	Vadose Zone Soil	AIRERLYERGWDGYLQLLTRFWQPYLDGKSTYDDAIARMVSSL*
Ga0137410_106384672	3300012944	Vadose Zone Soil	YERGWKNYLDVLQRFWQPYLDGRATFSDAIARMVSSL*
Ga0163162_111262431	3300013306	Switchgrass Rhizosphere	YKRGWENYLRVLTQYWQPYLDGRVEFSDAIAHMVSAL*
Ga0137409_102613421	3300015245	Vadose Zone Soil	KRGWENYLRVLTQYWQPYLDGSVTFDDAIAHMVSAL*
Ga0134072_101591561	3300015357	Grasslands Soil	LREGLYQRGWNEYFKLLQKFWQPYLDGHASFDDAIARMVSSL*
Ga0132256_1011831871	3300015372	Arabidopsis Rhizosphere	KRGWENYLRVLTQYWQPYLDGRVEFSDAIAHMVSAL*
Ga0182034_103571931	3300016371	Soil	VPYAVREGLYKRGWENYLRILTEYWQPYLDGRVDFSDAIAHMVSAL
Ga0187782_107808741	3300017975	Tropical Peatland	ERGWKEYYSLLEQFWQPYLDGRASYDDAIARMVSSL
Ga0187822_100841191	3300017994	Freshwater Sediment	GLYKRGWENYLRILTQYWQPYLDGSVEFSDAIAHMVSAL
Ga0193725_11376751	3300019883	Soil	ERGWKNYLDVLQRFWQPYLDGRATFSDAIARMVSSL
Ga0179594_100907431	3300020170	Vadose Zone Soil	ALREGLYERGWKNYLDVLQRFWQPYLDGRATFSDAIARMVSSL
Ga0210407_110263472	3300020579	Soil	GLYERGWKGYLDVLQRFWQPYLDGQATFSDAVARMVSSL
Ga0210407_111478262	3300020579	Soil	GLYERGWKDYLQLLTRFWQPYLDNKSTFDDAIARMVSAL
Ga0210395_110428132	3300020582	Soil	VREQLYKRGWDEYLKLLERFWQPYLDGNVSFDDAIAHMVSAL
Ga0210401_101999902	3300020583	Soil	REGLYERGWKDYLQLLNRFWQPYLDNKSTFDDAIARMVSAL
Ga0215015_103101712	3300021046	Soil	VYKRQGYLLLLERFWQPYLDGKTDFDAAIARMVSSL
Ga0210400_112829971	3300021170	Soil	EGLYQRGWNDYFKLLQKFWQPYLDGRASFDDAIARMVSSL
Ga0210408_102731031	3300021178	Soil	GLYQRGWNDYYKLLQKFWQPYLDGTATFDDAIARMVSSL
Ga0210393_114038062	3300021401	Soil	GLYKRGWENYLRLLTEYWQPYLDGRVTFDDAIAHMVSAL
Ga0210394_101179095	3300021420	Soil	EGLYERGWKDYLQLLTRFWQPYLDNKSTFDDAIARMVSAL
Ga0210394_106018132	3300021420	Soil	YAIREGIYQRGWDGYLKLLTQFWQPYLDGNSTFDDAVARMVSAL
Ga0210394_109910982	3300021420	Soil	VLYERGWKDYLQLLTRFWQPYLDNKSTFDDAIARMVSAL
Ga0210384_100368174	3300021432	Soil	LPISPYAIREGLYQRGWENYFQMLTHYWQPYLEGRVTFDDAIAHMVSAL
Ga0210391_115387672	3300021433	Soil	YERGWKDYLQLLTRFWQPYLDNQSTFDDAIARMVSAL
Ga0210390_105000061	3300021474	Soil	AIREGLYQRGWNDYFQLLIRFWQPYLDNKSTFDDAIARMVSAL
Ga0210402_102707761	3300021478	Soil	PYAIREGLYERGWKDYLDLLTRFWQPYLDNKSTFDDAIARMVSAL
Ga0210402_105366131	3300021478	Soil	LYQRDWDDYLKLLTRFWQPYLDGRVTFDDAIAHMVSAL
Ga0242655_102115922	3300022532	Soil	ENLYKRGWESYLPILTRYWQPYLEGQVTFDDAIAHMVSAL
Ga0242657_10132484	3300022722	Soil	YERGWKDYLQLLTRFWQPYLDNKSTFDDAIARMVSAL
Ga0247691_10205691	3300024222	Soil	RLYQRGWDDYLKLLERFWEPYLENRVTFDDAIAHIVSAL
Ga0179589_105712591	3300024288	Vadose Zone Soil	YAKREGLYQRGWENYLSLLNRYWQPYLQGRSTFDDAIARMVSAL
Ga0137417_14583201	3300024330	Vadose Zone Soil	KRDGWNDYFRLLRQFWQPYLERKPPFADAIARMVSSV
Ga0137417_15103616	3300024330	Vadose Zone Soil	VREGLYQRGWSDYFKLLQKFWQPYLDGNASFDDAIARMVSSL
Ga0208323_10824692	3300025439	Peatland	AMREGLYTHRWSNYLRVIQKYWQPYLDGSADFGDAIARMVSSL
Ga0207642_101185782	3300025899	Miscanthus Rhizosphere	ERLYQRGWDNYLSLLRRFWQPYLDGKASFDDAIAHMVSAL
Ga0207707_107757963	3300025912	Corn Rhizosphere	GLYQRGWENYLSLLTRYWQPYLDGRTTFDDAIAHMVSAL
Ga0207693_100631251	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	VREGLYKRGWENYLRVLTQYWQPYLDGRVDFSDAVAHMVSAL
Ga0207662_105593281	3300025918	Switchgrass Rhizosphere	EGLYKRGWENYLRVLTQYWQPYLDGRVDFSDAVAHMVSAL
Ga0209238_10720301	3300026301	Grasslands Soil	REGLYKRGWQDYLRVLTEYWQPYLDGKQSFDDAVAHMVSAL
Ga0209055_10600153	3300026309	Soil	ALREGLYQRGWNDYFKLLQKFWQPYLDGTASFDDAIARMVSSL
Ga0209158_11061291	3300026333	Soil	KRGWAGYQRALEQFWQPYLDGKADFDDAIARIVSAL
Ga0209158_12152482	3300026333	Soil	EGLYQRGWNEYFKLLQKFWQPYLDGHASFDDAIARMVSSL
Ga0209377_13239101	3300026334	Soil	GLYERGWKNYLDVLQRFWQPYLDGRATFSDAIARMVSSL
Ga0257146_10704231	3300026374	Soil	AVREGLYKRGWEDYLRVLTQFWQPYLDGKESFDDAIAHMVSAL
Ga0209474_100494171	3300026550	Soil	RGWKNYLELLQRFWQAYLDGKASFDDAIARMVSSL
Ga0209588_11924012	3300027671	Vadose Zone Soil	EGLYQRGWENYLQILTRYWQPYQPYLEGHVTFDDAIAHMVSAL
Ga0209248_101602981	3300027729	Bog Forest Soil	YQRGWDDYLKLLTRFWQPYLDGKVTFDDAIARMVSSL
Ga0208989_102046291	3300027738	Forest Soil	REGLYRRGWKNYLDVLQRFWQPYLDGRATFSDAVARMVSSL
Ga0209701_100627583	3300027862	Vadose Zone Soil	VREGLYKRGWDEYLKLLNRFWQPYLDNKVTFDDAIARMVSAQ
Ga0209701_101969442	3300027862	Vadose Zone Soil	VREGLYQRGWNDYFKLLQKFWQPYLDGTASFDDAIARMVSSL
Ga0209701_104310312	3300027862	Vadose Zone Soil	ALREGLYQRGWNDYFKLLQKFWQPYLDGRATFDDAIARMVSSL
Ga0209380_104035942	3300027889	Soil	YAVREQLFKRGWDEYLKLLERFWQPYLDGNVSFDDAIAHMVSAL
Ga0209488_106987791	3300027903	Vadose Zone Soil	AVREGLYKRGWQDYLRVLTEYWQPYLDGKQSFDDAVAHMVSAL
Ga0209069_105119442	3300027915	Watersheds	YTPYAQREGLYHRGWDSYFQLLSLYWQPYLDGKVTFDNAIAHMVSAL
Ga0209526_104305351	3300028047	Forest Soil	VPYAIREGLYERGWKDYLQLLTRFWQPYLDNKSTFDDAIARMVSAL
Ga0247682_10089183	3300028146	Soil	LYKRGWQDYLRVLTEYWQPYLDGKQSFDDAVAHMVSAL
Ga0302231_102188451	3300028775	Palsa	GLYLRGWDDYLRVLNRFWQPYLDGTASFDDAIARMVSAL
Ga0302232_104101761	3300028789	Palsa	VKQGLYQRGWDDYLKVLTHFWQPYLDGKATFDDAIARMVSAL
Ga0302228_102701271	3300028808	Palsa	YQRGWDDYLKVLTHFWQPYLDGKATFDDAIARMVSAL
Ga0302177_103223393	3300030053	Palsa	AVKEGLYLRGWDDYLRVLNRFWQPYLDGTASFDDAIARMVSAL
Ga0302181_105032552	3300030056	Palsa	RGWDDYLKVLTHFWQPYLDGKATFDDAIARMVSAL
Ga0075384_108571392	3300030841	Soil	PYAVREGLYKRGWENYLRLLTEYWQPYLDGRVTFDDAIAHMVSAL
Ga0170823_145785892	3300031128	Forest Soil	YKRGWENYLRLLTEYWQPYLDGRVSFDDAIAHMVSAL
Ga0170824_1214242431	3300031231	Forest Soil	TPYAIREGLYERGWKDYLDLLTRFWQPYLDNKSTFDDAIARMVSAL
Ga0265327_102887372	3300031251	Rhizosphere	NLSQRGWDDYLHLLTTFWQPYLDGRVTFEDAIAHMVSAL
Ga0318541_108259992	3300031545	Soil	VREGLYKRGWENYLRILTEYWQPYLDGRVDFSDAIAHMVSAL
Ga0307474_107667652	3300031718	Hardwood Forest Soil	NGEYTPYAVREQLYKRGWDTYLKLLDQFWQPYLDGKVSFDDAIAHMVSAL
Ga0307469_104606502	3300031720	Hardwood Forest Soil	REGLYQRGWDRYLTLLTTFWQPYLDNQETFDDAIARMVSAL
Ga0307477_103231493	3300031753	Hardwood Forest Soil	QRGWENYLQLLTRYWQPYLQGQVTFDDAIAHMVSAL
Ga0307475_100823111	3300031754	Hardwood Forest Soil	QDAEYTPYAMREGLYQRGWENYLTLLTHYWQPYLEGRATFDDAIAHMVSAL
Ga0307475_102675792	3300031754	Hardwood Forest Soil	KRGWENYLRILTEYWQPYLDGRVTFDDAIAHMVSAL
Ga0318535_105666751	3300031764	Soil	MREGLYQRNWDRYLELLTTFWQPYLEGQASFDDAIARMVSGL
Ga0307478_110198551	3300031823	Hardwood Forest Soil	VREGLYERGWKDYLQLLTHYWQPYLDNKTTFDDAIAHMVSNL
Ga0306921_114122492	3300031912	Soil	LYQHGWSSYYKLLARFWQPYLDGHATFDDAIARMISAL
Ga0307479_103687052	3300031962	Hardwood Forest Soil	GLYQRGWNDYFKLLQRFWQPYLDGRASFDDAIARMVSSL
Ga0307479_111949643	3300031962	Hardwood Forest Soil	RLYQRGWDEYLKLLERFWQPYLDGKTTFDDAIAHIVSAL
Ga0318518_101583251	3300032090	Soil	DMYAFREGLYQRGWKNYLELLQRFWQPYLDGKASFDDAIARMVSSL
Ga0307470_103650701	3300032174	Hardwood Forest Soil	GLYQRGWENYFEILSRYWQPYLESRVTFDDAIAHMVSAL
Ga0307471_1001962391	3300032180	Hardwood Forest Soil	AVREGLYKRGWENYLRVLTQYWQPYLDGRVDFSDAVAHMVSAL
Ga0335076_100835053	3300032955	Soil	ATTYTSGALQERLYSRGWQDYYRVLSDYWQPYLDGNVGFEDAIAHMVSAL
Ga0335076_104315631	3300032955	Soil	LYQRNWDEYLKLLERFWQPYLDGNATFEDAIARMVSAL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F038795

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences