Metagenome / Metatranscriptome Family F038796

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F038796
Family Type	Metagenome / Metatranscriptome
Number of Sequences	165
Average Sequence Length	60 residues
Representative Sequence	MVDKITAQRDVEYFYELLAKETDENKRVILQRLLADAEKLRQSDDQEENNNKKTNADQANIKDD
Number of Associated Samples	96
Number of Associated Scaffolds	162

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	85.98 %
% of genes near scaffold ends (potentially truncated)	21.21 %
% of genes from short scaffolds (< 2000 bps)	70.30 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (70.303 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (26.061 % of family members)
Environment Ontology (ENVO)	Unclassified (36.970 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (75.758 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 64.13% β-sheet: 0.00% Coil/Unstructured: 35.87%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 162 Family Scaffolds
PF05173	DapB_C	20.99
PF03480	DctP	18.52
PF13417	GST_N_3	6.17
PF00043	GST_C	4.32
PF01676	Metalloenzyme	3.09
PF13410	GST_C_2	2.47
PF00578	AhpC-TSA	1.85
PF07045	DUF1330	1.85
PF06736	TMEM175	1.23
PF00215	OMPdecase	1.23
PF05908	Gamma_PGA_hydro	1.23
PF05222	AlaDh_PNT_N	0.62
PF01035	DNA_binding_1	0.62
PF00012	HSP70	0.62
PF06415	iPGM_N	0.62
PF04444	Dioxygenase_N	0.62
PF13683	rve_3	0.62
PF03972	MmgE_PrpD	0.62
PF13193	AMP-binding_C	0.62
PF03358	FMN_red	0.62

COG ID	Name	Functional Category	% Frequency in 162 Family Scaffolds
COG0289	4-hydroxy-tetrahydrodipicolinate reductase	Amino acid transport and metabolism [E]	20.99
COG0435	Glutathionyl-hydroquinone reductase	Energy production and conversion [C]	4.32
COG0625	Glutathione S-transferase	Posttranslational modification, protein turnover, chaperones [O]	4.32
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	1.85
COG3548	Uncharacterized membrane protein	Function unknown [S]	1.23
COG4195	Phage-related replication protein YjqB, UPF0714/DUF867 family	Mobilome: prophages, transposons [X]	1.23
COG0350	DNA repair enzyme Ada (O6-methylguanine-DNA--protein-cysteine methyltransferase)	Replication, recombination and repair [L]	0.62
COG0443	Molecular chaperone DnaK (HSP70)	Posttranslational modification, protein turnover, chaperones [O]	0.62
COG0696	Phosphoglycerate mutase (BPG-independent), AlkP superfamily	Carbohydrate transport and metabolism [G]	0.62
COG2079	2-methylcitrate dehydratase PrpD	Carbohydrate transport and metabolism [G]	0.62
COG3485	Protocatechuate 3,4-dioxygenase beta subunit	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.62
COG3695	Alkylated DNA nucleotide flippase Atl1, participates in nucleotide excision repair, Ada-like DNA-binding domain	Transcription [K]	0.62

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	70.30 %
Unclassified	root	N/A	29.70 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	70.30 %
Unclassified	root	N/A	29.70 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	70.30 %
Unclassified	root	N/A	29.70 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	56.97 %
Unclassified	root	N/A	29.70 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	51.52 %
Unclassified	root	N/A	29.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.70 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	27.27 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.70 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	9.70 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.82 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.70 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	9.70 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.21 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.70 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	9.70 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.21 %
Mesorhizobium loti	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium loti	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.70 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	9.70 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.21 %
Mesorhizobium loti	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium loti	0.61 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10011496	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	5849	Open in IMG/M
3300000567\|JGI12270J11330_10047886	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2316	Open in IMG/M
3300002245\|JGIcombinedJ26739_100556340	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1024	Open in IMG/M
3300002245\|JGIcombinedJ26739_101548044	All Organisms → cellular organisms → Bacteria → Proteobacteria	559	Open in IMG/M
3300003505\|JGIcombinedJ51221_10046639	Not Available	1633	Open in IMG/M
3300004091\|Ga0062387_100372497	All Organisms → cellular organisms → Bacteria	951	Open in IMG/M
3300004091\|Ga0062387_100995800	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium loti	642	Open in IMG/M
3300004635\|Ga0062388_102755207	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300005437\|Ga0070710_10060090	Not Available	2161	Open in IMG/M
3300005538\|Ga0070731_10016640	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5186	Open in IMG/M
3300005538\|Ga0070731_10111380	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1813	Open in IMG/M
3300005542\|Ga0070732_10000029	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	160785	Open in IMG/M
3300005591\|Ga0070761_10095471	All Organisms → cellular organisms → Bacteria	1707	Open in IMG/M
3300005591\|Ga0070761_10690320	Not Available	639	Open in IMG/M
3300005602\|Ga0070762_10177081	All Organisms → cellular organisms → Bacteria	1292	Open in IMG/M
3300005610\|Ga0070763_10103726	All Organisms → cellular organisms → Bacteria	1437	Open in IMG/M
3300005610\|Ga0070763_10794909	Not Available	559	Open in IMG/M
3300005610\|Ga0070763_10851959	Not Available	540	Open in IMG/M
3300005712\|Ga0070764_10459758	Not Available	760	Open in IMG/M
3300005921\|Ga0070766_10132219	Not Available	1510	Open in IMG/M
3300005921\|Ga0070766_10326630	All Organisms → cellular organisms → Bacteria	991	Open in IMG/M
3300005921\|Ga0070766_10367668	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	936	Open in IMG/M
3300005921\|Ga0070766_10383442	All Organisms → cellular organisms → Bacteria	918	Open in IMG/M
3300005921\|Ga0070766_11131621	Not Available	541	Open in IMG/M
3300006050\|Ga0075028_100077244	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1658	Open in IMG/M
3300006052\|Ga0075029_100746451	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	663	Open in IMG/M
3300006174\|Ga0075014_100664138	Not Available	603	Open in IMG/M
3300006175\|Ga0070712_100791698	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	813	Open in IMG/M
3300006176\|Ga0070765_100118522	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2317	Open in IMG/M
3300006176\|Ga0070765_100122831	All Organisms → cellular organisms → Bacteria → Proteobacteria	2279	Open in IMG/M
3300006176\|Ga0070765_100244596	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1643	Open in IMG/M
3300006176\|Ga0070765_101270988	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	694	Open in IMG/M
3300006176\|Ga0070765_102073574	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	531	Open in IMG/M
3300006893\|Ga0073928_10248091	All Organisms → cellular organisms → Bacteria	1363	Open in IMG/M
3300006893\|Ga0073928_10441842	All Organisms → cellular organisms → Bacteria	943	Open in IMG/M
3300006893\|Ga0073928_10729174	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	689	Open in IMG/M
3300006893\|Ga0073928_10827171	Not Available	638	Open in IMG/M
3300006893\|Ga0073928_10888645	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	611	Open in IMG/M
3300009520\|Ga0116214_1166665	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	823	Open in IMG/M
3300009521\|Ga0116222_1007839	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5131	Open in IMG/M
3300009523\|Ga0116221_1011007	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5229	Open in IMG/M
3300009683\|Ga0116224_10143855	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1149	Open in IMG/M
3300009700\|Ga0116217_10548273	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	723	Open in IMG/M
3300010379\|Ga0136449_100340889	All Organisms → cellular organisms → Bacteria → Proteobacteria	2701	Open in IMG/M
3300010379\|Ga0136449_100457978	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2234	Open in IMG/M
3300010379\|Ga0136449_101408899	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1075	Open in IMG/M
3300014200\|Ga0181526_10230872	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1181	Open in IMG/M
3300014200\|Ga0181526_10369181	Not Available	912	Open in IMG/M
3300014489\|Ga0182018_10079501	Not Available	1947	Open in IMG/M
3300014489\|Ga0182018_10126749	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1474	Open in IMG/M
3300014501\|Ga0182024_10849333	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1106	Open in IMG/M
3300014657\|Ga0181522_10313004	Not Available	933	Open in IMG/M
3300014657\|Ga0181522_10505045	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	729	Open in IMG/M
3300014657\|Ga0181522_10646312	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	643	Open in IMG/M
3300017941\|Ga0187850_10411425	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	589	Open in IMG/M
3300017946\|Ga0187879_10005755	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	8167	Open in IMG/M
3300017993\|Ga0187823_10354083	Not Available	524	Open in IMG/M
3300018020\|Ga0187861_10454665	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	532	Open in IMG/M
3300018026\|Ga0187857_10285745	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	754	Open in IMG/M
3300018037\|Ga0187883_10010042	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	5398	Open in IMG/M
3300018038\|Ga0187855_10526781	Not Available	688	Open in IMG/M
3300019888\|Ga0193751_1002203	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	11915	Open in IMG/M
3300020580\|Ga0210403_10830760	Not Available	733	Open in IMG/M
3300020582\|Ga0210395_10001317	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	19271	Open in IMG/M
3300020582\|Ga0210395_10008787	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7586	Open in IMG/M
3300020582\|Ga0210395_10418981	Not Available	1007	Open in IMG/M
3300020582\|Ga0210395_11347289	Not Available	521	Open in IMG/M
3300020583\|Ga0210401_10069112	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	3327	Open in IMG/M
3300020583\|Ga0210401_10335675	All Organisms → cellular organisms → Bacteria	1373	Open in IMG/M
3300020583\|Ga0210401_10546065	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1021	Open in IMG/M
3300021170\|Ga0210400_10880010	Not Available	732	Open in IMG/M
3300021171\|Ga0210405_10002776	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	17827	Open in IMG/M
3300021171\|Ga0210405_10018762	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	5646	Open in IMG/M
3300021171\|Ga0210405_10100235	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2285	Open in IMG/M
3300021171\|Ga0210405_10147324	All Organisms → cellular organisms → Bacteria	1863	Open in IMG/M
3300021171\|Ga0210405_10440006	Not Available	1025	Open in IMG/M
3300021178\|Ga0210408_10000011	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	296970	Open in IMG/M
3300021180\|Ga0210396_10019303	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	6317	Open in IMG/M
3300021180\|Ga0210396_10970418	All Organisms → cellular organisms → Bacteria	721	Open in IMG/M
3300021181\|Ga0210388_10225403	All Organisms → cellular organisms → Bacteria	1643	Open in IMG/M
3300021181\|Ga0210388_10399071	All Organisms → cellular organisms → Bacteria	1209	Open in IMG/M
3300021401\|Ga0210393_10541803	All Organisms → cellular organisms → Bacteria → Proteobacteria	951	Open in IMG/M
3300021401\|Ga0210393_10795379	Not Available	770	Open in IMG/M
3300021401\|Ga0210393_11098275	Not Available	642	Open in IMG/M
3300021401\|Ga0210393_11335689	Not Available	574	Open in IMG/M
3300021403\|Ga0210397_10470258	Not Available	949	Open in IMG/M
3300021404\|Ga0210389_10344870	All Organisms → cellular organisms → Bacteria	1169	Open in IMG/M
3300021407\|Ga0210383_10083281	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2680	Open in IMG/M
3300021407\|Ga0210383_10687276	Not Available	880	Open in IMG/M
3300021420\|Ga0210394_10039201	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	4193	Open in IMG/M
3300021420\|Ga0210394_10050211	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3647	Open in IMG/M
3300021420\|Ga0210394_11057192	Not Available	701	Open in IMG/M
3300021420\|Ga0210394_11276795	Not Available	628	Open in IMG/M
3300021432\|Ga0210384_10946141	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	763	Open in IMG/M
3300021432\|Ga0210384_11435593	Not Available	595	Open in IMG/M
3300021433\|Ga0210391_10590970	All Organisms → cellular organisms → Bacteria	872	Open in IMG/M
3300021474\|Ga0210390_10342363	Not Available	1266	Open in IMG/M
3300021477\|Ga0210398_10007268	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	10078	Open in IMG/M
3300021477\|Ga0210398_10012834	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7345	Open in IMG/M
3300021478\|Ga0210402_10573383	All Organisms → cellular organisms → Bacteria	1047	Open in IMG/M
3300021478\|Ga0210402_10699685	Not Available	936	Open in IMG/M
3300021478\|Ga0210402_10739361	Not Available	908	Open in IMG/M
3300021479\|Ga0210410_10016150	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6440	Open in IMG/M
3300021479\|Ga0210410_10245969	All Organisms → cellular organisms → Bacteria	1604	Open in IMG/M
3300021479\|Ga0210410_11533198	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	559	Open in IMG/M
3300022557\|Ga0212123_10087133	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2606	Open in IMG/M
3300022557\|Ga0212123_10217023	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1402	Open in IMG/M
3300022557\|Ga0212123_10595005	Not Available	699	Open in IMG/M
3300022557\|Ga0212123_10652510	Not Available	655	Open in IMG/M
3300022557\|Ga0212123_10736920	Not Available	601	Open in IMG/M
3300024225\|Ga0224572_1001981	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3200	Open in IMG/M
3300024225\|Ga0224572_1001981	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3200	Open in IMG/M
3300024225\|Ga0224572_1020236	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1278	Open in IMG/M
3300025915\|Ga0207693_11015919	Not Available	633	Open in IMG/M
3300026998\|Ga0208369_1010962	Not Available	835	Open in IMG/M
3300027030\|Ga0208240_1020239	Not Available	720	Open in IMG/M
3300027090\|Ga0208604_1000156	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	10262	Open in IMG/M
3300027370\|Ga0209010_1005793	All Organisms → cellular organisms → Bacteria → Proteobacteria	2491	Open in IMG/M
3300027439\|Ga0209332_1002101	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	4289	Open in IMG/M
3300027521\|Ga0209524_1018086	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1450	Open in IMG/M
3300027562\|Ga0209735_1058047	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	832	Open in IMG/M
3300027567\|Ga0209115_1000493	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5840	Open in IMG/M
3300027568\|Ga0208042_1004582	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	3946	Open in IMG/M
3300027570\|Ga0208043_1006330	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	4081	Open in IMG/M
3300027570\|Ga0208043_1006330	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	4081	Open in IMG/M
3300027610\|Ga0209528_1124090	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300027629\|Ga0209422_1049165	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1014	Open in IMG/M
3300027635\|Ga0209625_1050612	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	927	Open in IMG/M
3300027648\|Ga0209420_1011820	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	3062	Open in IMG/M
3300027678\|Ga0209011_1030633	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1710	Open in IMG/M
3300027684\|Ga0209626_1004827	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	3006	Open in IMG/M
3300027767\|Ga0209655_10115914	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	891	Open in IMG/M
3300027842\|Ga0209580_10000003	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	892418	Open in IMG/M
3300027853\|Ga0209274_10093315	All Organisms → cellular organisms → Bacteria	1477	Open in IMG/M
3300027853\|Ga0209274_10490169	Not Available	636	Open in IMG/M
3300027855\|Ga0209693_10021520	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3110	Open in IMG/M
3300027869\|Ga0209579_10287047	All Organisms → cellular organisms → Bacteria	886	Open in IMG/M
3300027889\|Ga0209380_10153900	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1344	Open in IMG/M
3300027889\|Ga0209380_10196532	Not Available	1184	Open in IMG/M
3300027889\|Ga0209380_10292902	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	956	Open in IMG/M
3300027889\|Ga0209380_10627667	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	621	Open in IMG/M
3300027908\|Ga0209006_10416440	All Organisms → cellular organisms → Bacteria → Proteobacteria	1130	Open in IMG/M
3300027911\|Ga0209698_10124295	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2135	Open in IMG/M
3300028906\|Ga0308309_10382507	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1204	Open in IMG/M
3300028906\|Ga0308309_10930200	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	754	Open in IMG/M
3300028906\|Ga0308309_11403796	Not Available	598	Open in IMG/M
3300030759\|Ga0265745_1005964	Not Available	810	Open in IMG/M
3300031057\|Ga0170834_101352102	All Organisms → cellular organisms → Bacteria → Proteobacteria	1040	Open in IMG/M
3300031090\|Ga0265760_10007638	All Organisms → cellular organisms → Bacteria → Proteobacteria	3089	Open in IMG/M
3300031090\|Ga0265760_10007638	All Organisms → cellular organisms → Bacteria → Proteobacteria	3089	Open in IMG/M
3300031247\|Ga0265340_10185739	Not Available	939	Open in IMG/M
3300031446\|Ga0170820_12804525	Not Available	619	Open in IMG/M
3300031708\|Ga0310686_107545203	Not Available	739	Open in IMG/M
3300031708\|Ga0310686_107770568	Not Available	885	Open in IMG/M
3300031708\|Ga0310686_114758020	All Organisms → cellular organisms → Bacteria	1082	Open in IMG/M
3300031715\|Ga0307476_10000613	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	25953	Open in IMG/M
3300031718\|Ga0307474_10277064	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1289	Open in IMG/M
3300032160\|Ga0311301_10235525	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3052	Open in IMG/M
3300032160\|Ga0311301_10239700	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	3014	Open in IMG/M
3300032160\|Ga0311301_11469060	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	843	Open in IMG/M
3300032160\|Ga0311301_11515715	Not Available	824	Open in IMG/M
3300032515\|Ga0348332_10903464	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1075	Open in IMG/M
3300032515\|Ga0348332_13712556	Not Available	843	Open in IMG/M
3300032805\|Ga0335078_11560821	Not Available	734	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.58%
Host-Associated	Host-Associated	2.42%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	79.39%
Aquatic	Environmental → Aquatic	18.18%
Plants	Host-Associated → Plants	2.42%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	78.18%
Freshwater	Environmental → Aquatic → Freshwater	9.70%
Thermal Springs	Environmental → Aquatic → Thermal Springs	6.06%
Sediment	Environmental → Aquatic → Sediment	2.42%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.42%
Plant Litter	Environmental → Terrestrial → Plant Litter	1.21%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	46.06%
Loam	Environmental → Terrestrial → Soil → Loam	29.70%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	9.70%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	6.06%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.42%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.82%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	1.21%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.61%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	28.48%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	27.27%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.58%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	9.09%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	6.06%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.42%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.42%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.82%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	1.21%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.61%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.61%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	26.06%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	16.36%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	10.91%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	10.30%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	6.06%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.24%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	3.64%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	3.03%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.03%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.42%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.42%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.42%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.82%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.21%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.21%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	1.21%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	1.21%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.61%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.61%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.61%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.61%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300017941	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_150	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017993	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3	Environmental	Open in IMG/M
3300018020	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_100	Environmental	Open in IMG/M
3300018026	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_100	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300024225	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU5	Host-Associated	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026998	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF046 (SPAdes)	Environmental	Open in IMG/M
3300027030	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF041 (SPAdes)	Environmental	Open in IMG/M
3300027090	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF016 (SPAdes)	Environmental	Open in IMG/M
3300027370	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O3 (SPAdes)	Environmental	Open in IMG/M
3300027439	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027521	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027562	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027567	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027568	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG (SPAdes)	Environmental	Open in IMG/M
3300027570	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG (SPAdes)	Environmental	Open in IMG/M
3300027610	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027629	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M3 (SPAdes)	Environmental	Open in IMG/M
3300027635	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027648	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1 (SPAdes)	Environmental	Open in IMG/M
3300027678	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027684	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027767	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030759	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSU1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031247	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG	Host-Associated	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_100114966	3300000567	Peatlands Soil	MVDKITAQRDVEYFTELLAKATDENQRVILQRLLDDAEKRRQSDDQEKK*
JGI12270J11330_100478864	3300000567	Peatlands Soil	MVDKSTAQRDVEYFYELLAKETDENQRVILQRLLADAEKLRQSDDSEANSNKKTNAGRPDRKDD*
JGIcombinedJ26739_1005563402	3300002245	Forest Soil	MIDKITAQRDVEYFYELLAKETDENQRVILRRLLAEAERLRQSDDQGENTSKKTNADQANVKDD*
JGIcombinedJ26739_1015480441	3300002245	Forest Soil	MVDKITAQRDVEYFYELLAKETDENQRAILQRLLAEAEKLRQSEDQGENTNKKTN
JGIcombinedJ51221_100466392	3300003505	Forest Soil	MVDKITAQRDVEYFYELLAKETDENKRVILQRLLADAEKLRQSDDQEENRNTKTNADQRNIKDR*
Ga0062387_1003724971	3300004091	Bog Forest Soil	VQAMVDKITAQRDVEYFYELLAKETDENKRVILQRMLADAEKLRQSDDQEEKGDKNTKADQRNSKDD*
Ga0062387_1009958001	3300004091	Bog Forest Soil	MVDKITAQRDVEYFYELLAKETDENQRVILQRLLAEAEKLRQADDQEENGNKKTSADRADSKDD*
Ga0062388_1027552071	3300004635	Bog Forest Soil	VEYFYELLAKETDENKRVILQRLLAEAEKLRQSEDPEENSNKKTNAGQADIKDD*
Ga0070710_100600903	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MVDKITAQRDVEYITELLAKETDENRRVILQRLLADAEKLRQSEAAEETSNKKTDTGQVDSKDD*
Ga0070731_100166402	3300005538	Surface Soil	MVDKITAQRDVEYFYELLAKETDENKRVILQRLLAEAEKLRQSADQEENRQ*
Ga0070731_101113802	3300005538	Surface Soil	MVDKITAQRDVEYFYELLAKETDENQRVILLRLLADAEKLRQSDDPEANRNKNPNAGRSDSKDV*
Ga0070732_1000002978	3300005542	Surface Soil	MVDKITAQRDVEYITELLAKETDENRRVILQRLLADAEKLRQSEDPEENSNKKTAAGQADSKDD*
Ga0070761_100954715	3300005591	Soil	MVDKITAQRDVEFFYELLAKETDENQRVILQRLLADAEQRRQSEDPVENSNRKPNAGQVNIKGD*
Ga0070761_106903201	3300005591	Soil	MVDKITAQRDVEYFYELLAKETDENQRVILQRLLEDAEKRRQTDDQEENSNKKRSADHVNIKGS*
Ga0070762_101770812	3300005602	Soil	MVDKITAQRDVEYFYELLAKETDENKRAILQRLLAEAEKRRQTDDQEENRQ*
Ga0070763_101037262	3300005610	Soil	AEATPHRGQAMVDKITAQRDVEYFYELLAKETDENKRAILQRLLAEAEKRRQTDDQEETRQ*
Ga0070763_107949091	3300005610	Soil	MVDKITAQRDVEYFYELLAKETDENKRVILQRLLADAEKLRQSDDQEEKGDKNTNADQRDSKDD*
Ga0070763_108519591	3300005610	Soil	MVDKITAQRDVEYFYELLAKETDENKRAILQRLLAEAEKRRQADDHEENRQ*
Ga0070764_104597582	3300005712	Soil	MVDKITAQRDVEYFYELLAKETDENQRVILQRLLEDAEKRRQTDDQEENSNKKRSANHVNIKGS*
Ga0070766_101322191	3300005921	Soil	MVDKITAQRDVEYFYELLAKETDENKRVILQRLLADAEKLRQSDDQEENGDKKTKAAQANVKDG*
Ga0070766_103266301	3300005921	Soil	DVEYFYELLAKETDENKRVILQRMLADAEKLRQSDDQEEKGDKNTKADQRNSKDD*
Ga0070766_103676682	3300005921	Soil	MVDKITAQRDVEYIYELLAKETDENQRVILQRLLADAERLRQSDNQQENSNKKTNAD*
Ga0070766_103834423	3300005921	Soil	MVDKITAQRDVEYFYDLLAKETDENKRVILQRLLAEAEKRRQSDDQEENSSKKTNADQVDSEDG*
Ga0070766_111316211	3300005921	Soil	QRDVEYFYDLLAKETDENQRVILQRLLAEAEKRRQADDQEENSSKLA*
Ga0075028_1000772442	3300006050	Watersheds	MVDKITAQRDVEYFYELLAKETDENKRAILQRLLAEAEKLRQSDGQEENINKKTNAEQVNVKDG*
Ga0075029_1007464512	3300006052	Watersheds	MVDKITAQRDVEYFYELLAKETDENQRVILQRLLADAERLRQSEGPEENKNKKANADRVNSKGD*
Ga0075014_1006641382	3300006174	Watersheds	VQAMVDKITAQRDVEYFYELLAKETDENKRAILQRLLAEAEKRRQSGDQEENRQ*
Ga0070712_1007916983	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	AGRRLMGVQAMVDKITAQRDVEYITELLAKETDENRRVILQRLLADAEKLRQSEAAEEASNKKTDTGQVDSKDD*
Ga0070765_1001185223	3300006176	Soil	MVDKITAQRDVEYFYELLAKETDENKRAILQRLLAEAEKLRQSDDQEEDSNKKANADQVNVKDG*
Ga0070765_1001228312	3300006176	Soil	MVDKITAQRDVEYFYELLAKETDENKRAILQRLLAEAEKRRQTDDQEEKDSGTKANADQVNVKDS*
Ga0070765_1002445962	3300006176	Soil	MVDKITAQRDVEYFYELLAKATDENQRVILQRLLAEAEKRRQSEDQEENSNKNKNTGQADVKGD*
Ga0070765_1012709882	3300006176	Soil	MVDKITAQRDVEYFYELLAKETDENKRVILQRLLAEAEKRRQSDDQEENSKTNTNAEQVNVKDD*
Ga0070765_1020735741	3300006176	Soil	FIRVQAMVDKITAQRDVEYFYELLAKETDENKRVILQRLLAEAEKLRQSDDQEENSNKKTNADQVNVKGD*
Ga0073928_102480912	3300006893	Iron-Sulfur Acid Spring	MVDKIIAQRDVEFFTELLAKETDENRRVILQRLLAEAEKLRQSDDQEENSNKKTNADQVNSKEG*
Ga0073928_104418421	3300006893	Iron-Sulfur Acid Spring	ITAQRDVEYFYELLAKETDENKRAILQRLLAEAEKLRQSDDQDDNSSSTKSNADQVNVKGG*
Ga0073928_107291742	3300006893	Iron-Sulfur Acid Spring	IRAQTMVDKITAQRDVEYFYELLAKETDENKRAILQRLLAEAEKLRQSNDQDDNSSSTKTNADQVNVKDG*
Ga0073928_108271712	3300006893	Iron-Sulfur Acid Spring	MVDKITAQRDVEYFYELLAKETDENKRAILQRLLAEAEKLRQSNDQE*
Ga0073928_108886451	3300006893	Iron-Sulfur Acid Spring	SPGRRLFRVQAMVDKITAQRDVEYFYELLAKETDENKRAILQRLLAEAEKLRQSGDQEGNSNK*
Ga0116214_11666651	3300009520	Peatlands Soil	MVDKITAQRDVEYFYELLAKETDENQRVILQRLLEDAEKRRQTEDAENQSNKKTNADQVNSKGD*
Ga0116222_10078393	3300009521	Peatlands Soil	VQAIVDIITTQLDVEYFYELLAKETDENKRMILQRLVAEAERLRQSKDPEEDSNKTTNAGQVNIKDD*
Ga0116221_10110075	3300009523	Peatlands Soil	MVDIITAQRDVEYFYELLAKETDENKRMILQRLVAEAERLRQSKDPEEDSNKTTNAGQVNIKDD*
Ga0116224_101438554	3300009683	Peatlands Soil	MVDKITAQRDVEYFIVLLAKATDENQRVILQRLLDDAEKRRQSDDQ
Ga0116217_105482733	3300009700	Peatlands Soil	MVDKITAQRDVEYFTELLAKATDENQRVILQRLLADAEKRRQTDDPEDQSNKKTNFEQVNIKGD*
Ga0136449_1003408892	3300010379	Peatlands Soil	MVDKITAQRDVEYFYELLAKETDENKRAILQRLLAEAEKLRQSDHQDENSNKKTNADQVNVKDS*
Ga0136449_1004579784	3300010379	Peatlands Soil	MVDKITAQRDVEYFYELLAKETDENKRAILQRLLADAEKLRQSDDQEDNSNK*
Ga0136449_1014088992	3300010379	Peatlands Soil	MVDKITAQRDVEYFYELLAKEADENKRVILQRLLADAEKLRQSKDQEDSNKTTNADQADIKDD*
Ga0181526_102308722	3300014200	Bog	MVDKITAQRDVEYFYELLAKETDENQRVILQRLLAEAEKLRQSDHQEENSNKNTNVDRADSKDG*
Ga0181526_103691811	3300014200	Bog	MVDKITSQRDVEYFYELLAKETDENQRVILQRLLADAERLRQSDNHQENSNKKTNAD*
Ga0182018_100795014	3300014489	Palsa	MVDKITAQRDVEYIYELLAKETDENQRVILQRLLADAERLRQSDNHQENSNKKTNADQANSKDD*
Ga0182018_101267492	3300014489	Palsa	MVDRITAQRDVEYFYELLANETDENKRVILQRLLAEAEKLRQSEDQEKNSNKKTNAGQVNITDG*
Ga0182024_108493333	3300014501	Permafrost	MVDRITAQRDVEYFYELLANETDENKRVILQRLLAEAEKLRQSEDQEENSNKKTNAGQVNITDG*
Ga0181522_103130041	3300014657	Bog	MVDKITAQRDVEYFYELLAKETDENQRVILQRLLADAERLRQSE
Ga0181522_105050452	3300014657	Bog	MVDKITAQRDVEYFYELLAKETDENQRVILQRLLADAERLRQSDNHQENSNKKTNADQANSKDD*
Ga0181522_106463121	3300014657	Bog	ITAQRDVEYFYELLAKETDENQRVILQRLLADAERLRQSEGPEENKNKKANADRVNSKGD
Ga0187850_104114252	3300017941	Peatland	RVQAMVDKITAQRDVEYFTELLAKATDENQRVILQRLLDDAEKRRQSDDQEKK
Ga0187879_100057555	3300017946	Peatland	MVDKITAQRDVEYFTELLAKATDENQRVILQRLLDDAEKRRQSDDQEKK
Ga0187823_103540831	3300017993	Freshwater Sediment	MVDKITAQRDVEYITELLAKETDENRRVILQRLLADAEKLRQSEDPEENSNKKT
Ga0187861_104546652	3300018020	Peatland	VDKITAQRDVEYFTELLAKATDENQRVILQRLLDDAEKRRQSDDQEKK
Ga0187857_102857452	3300018026	Peatland	VQAMVDKITAQRDVEYFTELLAKATDENQRVILQRLLDDAEKRRQSDDQEK
Ga0187883_100100421	3300018037	Peatland	AMVDKITAQRDVEYFTELLAKATDENQRVILQRLLDDAEKRRQSDDQEKK
Ga0187855_105267812	3300018038	Peatland	MVDKITAQRDVEYFTELLAKATDENRRVILQRLLDDAEKRRQSDDQEKK
Ga0193751_10022035	3300019888	Soil	MVDKITAQRDVEYFYELLAKETDENKRVILQRLLAEAEKLRQSGDQEKNSNK
Ga0210403_108307601	3300020580	Soil	MVDKITAQRDVEYFYELLAKETDENKRVILQRLLADAEKLRQSDDQEENRNTKTNADQRNIKDD
Ga0210395_1000131712	3300020582	Soil	MVDKITAQRDVEYFYELLAKETDENKRVILQRLLADAERLRQSEDEEEKSNKKTNADQVNIKDD
Ga0210395_100087875	3300020582	Soil	MVDKITAQRDVEYFYELLAKETDENKRVILQRLLADAEKLRQSDDQEENRNTKTNADQRNIKDR
Ga0210395_104189813	3300020582	Soil	MVDKITAQRDVEYFYELLAKETDENKRVILQRLLADAERLRQSEDEKSNKKTNADSVNSKDD
Ga0210395_113472891	3300020582	Soil	LRVQAMVDKITAQRDVEYFTELLAKATDENQRVILKRLLDDAEKRRQTDDP
Ga0210401_100691123	3300020583	Soil	MVDKITAQRDVEYFYELLAKETDENKRVILQRLLADAEKLRQSDDQEEKGDKNTNADQRDSKDD
Ga0210401_103356753	3300020583	Soil	MVDKITAQRDVEYFYELLAKETDENKRAILQRLLAEAEKRRQTDDQEENRQ
Ga0210401_105460652	3300020583	Soil	MVDKITAQRDVEYFTELLAKATDENQRVILQRLLDDAEKRRQSDDPEDLSNKKTNAD
Ga0210400_108800102	3300021170	Soil	MVDKITAQRDVEYFYELLAKETDENKRAILQRLLAEAEKRRQTDDQEETRQ
Ga0210405_100027765	3300021171	Soil	MVDKITAQRDVEYFYELLAKETDENKRAILQRLLAEAEKLRQSDDREENRQ
Ga0210405_100187625	3300021171	Soil	MVDKITAQRDVEYFYELLAKETDENKRAILQRLLAEAEKRRQTDDQEEKGSGTKANADRGNVKDG
Ga0210405_101002354	3300021171	Soil	MVDKITAQRDVEFFYELLAKETDENQRVILQRLLADAEKRRQSEDPVENSNKKTNADQVDSKGD
Ga0210405_101473243	3300021171	Soil	MVDKITAQRDVEYFYELLAKETDENKRVILQRLLAEAEKLRQSADQEENRQ
Ga0210405_104400062	3300021171	Soil	MVDKITAQRDVEYFYELLAKETDENKRAILQRLLAEAERLRQSDDQEEKGDKNTKADQDDSKDG
Ga0210408_1000001146	3300021178	Soil	MVDKITAQRDVEYITELLAKETDENRRVILQRLLADAEKLRQTTEDEDQEEISNKKTNADRVNSNDD
Ga0210396_100193035	3300021180	Soil	MVDKITAQRDVEFFYELLAKETDENQRVILQRLLADAEQRRQSEDPVENSNKIPNAGQINIKDD
Ga0210396_109704181	3300021180	Soil	MVDKITAQRDVEYIYELLAKETDENQRVILQRLLADAERLRQSDN
Ga0210388_102254032	3300021181	Soil	MVDKITAQRDVEYFYELLAKETDENKRVILQRLLADAEKLRQSDDQEEKGDKKTNADQRDSKDD
Ga0210388_103990713	3300021181	Soil	MIDKITAQRDVEYFYELLAKETDENQRVILQRLLEDAEKRRQTDDQEENSNKKRSADQVNIKGS
Ga0210393_105418032	3300021401	Soil	MVDKITAQRDVEYFYELLAKETDENQRVILQRLLAEAEKLRQSEDQGENTSKKTNAGQPKDRGR
Ga0210393_107953792	3300021401	Soil	MVDKITAQRDVEYFYELLAKETDENKRAILQRLLAEAEKLRQSDDQEEKGDKKTNADQRDSKDD
Ga0210393_110982751	3300021401	Soil	MVDKITAQRDVEYFYELLAKETDENQRAILQRLLAEAEKLRQSEDQGENTNKKTNAGQPEDRGR
Ga0210393_113356891	3300021401	Soil	MVDKITAQRDVEYFYELLAKETDENKRMILQRLLAEAEKRRQSEDPEDQSNKKTHADAVNIKYD
Ga0210397_104702582	3300021403	Soil	MVDKITAQRDVEYFYELLAKETDENKRAILQRLLAEAEKLRQSDDQEEDSNKKANADQVNVKDG
Ga0210389_103448702	3300021404	Soil	RLIRVQAMVDKITAQRDVEYFYELLAKETDENKRAILQRLLAEAEKLRQSGDQEENSSKKTNVD
Ga0210383_100832813	3300021407	Soil	MVDKITAQRDVEYFYELLAKETDENQRVILQRLLEDAEKRRQTDDQEENSNKKRSADHVNIKGS
Ga0210383_106872762	3300021407	Soil	MVDKITAQRDVEYFYELLAKETDENKRVILQRLLADAEKLRQSDDQEENRNKKTNVDQRNIKDD
Ga0210394_100392014	3300021420	Soil	MVDKITAQRDVEYFYELLAKETDENQRVILQRLLADAEKLRQSDDLEVQSNKKTDADRADSKGN
Ga0210394_100502113	3300021420	Soil	MVDKITAQRDVEYFYELLAKETDENQRVILQRLLAEAEKLRHSDDREEAINKKPNAGQVDSKDD
Ga0210394_110571921	3300021420	Soil	LNWQRQPGRRLIRAQAMVDKITAQRDVEYFYELLAKETDENKRVILQRLLADAEKLRQSDDQEENRNKKTNADQRNIKDD
Ga0210394_112767951	3300021420	Soil	MVDKITAQRDVEYFYELLAKETDENKRTILQRLLAEAEKRRQTDDQEENRQ
Ga0210384_109461411	3300021432	Soil	MVDKITAQRDVEYFYELLAKETDENKRVILQRLLAEAEKLRQSEDPE
Ga0210384_114355931	3300021432	Soil	MVDKITAQRDVEYFYELLAKETDENKRVILQRLLAEAEKRRQTDDQEEKGSGTKANADQVNVKDG
Ga0210391_105909701	3300021433	Soil	MVDKITAQRDVEYFYELLAKETDENQRVILQRLLEDAEKRRQTDDQEE
Ga0210390_103423632	3300021474	Soil	MVDKITAQRDVEYFYELLAKETDENKRAILQRLLAEAEKLRQSDDQEENSNKK
Ga0210398_1000726811	3300021477	Soil	MVDKITAQRDVEYFYELLAKETDENKRVILQRLLADAERLRQSEDQEGQSNKKTNADQVNSKHD
Ga0210398_100128342	3300021477	Soil	MVDKITAQRDVEYFYELLAKETDENKRVILQRLLAEAEKRRQTDDQEETRQ
Ga0210402_105733831	3300021478	Soil	MVDKITAQRDVEYFYELLAKETDENKRAILQRLLAEAEKLRQSDDQEESSNK
Ga0210402_106996852	3300021478	Soil	MVDKITAQRDVEYFYELLAKETDENKRVILQRLLAEAEKRRQSDDQEENKQ
Ga0210402_107393612	3300021478	Soil	MVDKITAQRDVEYFYELLAKETDENKRAILQRLLAEAEKLRQSDDQEENSNKKTSVD
Ga0210410_100161508	3300021479	Soil	MVDKITAQRDVEYFYELLAKETDENKRAILQRLLAEAEKLRQSGDQEENSNKKTNVD
Ga0210410_102459692	3300021479	Soil	MVDKITAQRDVEYFYELLAKETDENKRVILQRLLADAEKMRQSDDQEENRNTKTNADQRNIKDR
Ga0210410_115331981	3300021479	Soil	MVDKITAQRDVEYFYELLAKETDENKRAILQRLLAEAEKLRQSDDQEENSNKKT
Ga0212123_100871332	3300022557	Iron-Sulfur Acid Spring	MVDKITAQRDVEYFYELLAKETDENKRAILQRLLAEAEKLRQSGDQEGNSNK
Ga0212123_102170232	3300022557	Iron-Sulfur Acid Spring	MVDKIIAQRDVEFFTELLAKETDENRRVILQRLLAEAEKLRQSDDQEENSNKKTNADQVNSKEG
Ga0212123_105950052	3300022557	Iron-Sulfur Acid Spring	AQRDVEYFYELLAKETDENKRAVLQRLLAEAEKRRQTDDQEETRQ
Ga0212123_106525102	3300022557	Iron-Sulfur Acid Spring	ITAQRDVEYFYELLAKETDENKRAILQRLLAEAEKLRQSDDQDDNSSSTKSNADQVNVKG
Ga0212123_107369202	3300022557	Iron-Sulfur Acid Spring	MVDKITAQRDVEYFYELLAKETDENKRAILQRLLAEAEKLRQSNDQDDNSSSTKTNADQVNVKDG
Ga0224572_10019812	3300024225	Rhizosphere	MVDKITAQRDVEYFYELLAKETDENKRVILQRLLADAEKLRQSDDQVEKGDKNTKAGQRNSKDD
Ga0224572_10019815	3300024225	Rhizosphere	MVDKITAQRDVEYFYELLAKETDENKRVILQRMLADAEKLRQSDDQEEKGDKNTKADQRNSKDD
Ga0224572_10202362	3300024225	Rhizosphere	MVDKATAQRDVEYFTELLAKATDENQRVILQRLLDDAEKRRQSDDPEDQSNKKTNADRKG
Ga0207692_112073132	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MVDKITAQRDVEYITELLAKETDENRRVILQRLLADAEKLRQS
Ga0207693_110159192	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	AGRRLMGVQAMVDKITAQRDVEYITELLAKETDENRRVILQRLLADAEKLRQSEAAEEASNKKTDTGQVDSKDD
Ga0208369_10109622	3300026998	Forest Soil	MVDKITAQRDVEYFYELLAKETDENKRAILQRLLAEAEKRRQTDDQEEKGSGTKANADQVNVKDS
Ga0208240_10202391	3300027030	Forest Soil	VQAMVDKITAQRDVEYFYELLAKETDENKRAILQRLLAEAEKLRQSGDQEDNSNK
Ga0208604_100015610	3300027090	Forest Soil	MVDKITAQRDVEYFYELLAKETDENKRVILQRLLAEAEKWRQTGDQEENRQ
Ga0209010_10057933	3300027370	Forest Soil	MVDKITAQRDVEYIYELLAKETDENQRVILQRLLADAERLRQSDNQEENSNKKTNADQVNSKGD
Ga0209332_10021014	3300027439	Forest Soil	MVDKITAQRDVEYFYELLAKETDENKRVILQRLLAEAEKLRQSDHQEEAINKKPNAGQVDSKGN
Ga0209524_10180862	3300027521	Forest Soil	MVDKITAQRDVEYFYELLAKETDENKRAILQRLLAEAEKLRQSDDQDDNSSSTKNNADQVNVRGG
Ga0209735_10580472	3300027562	Forest Soil	MVDKIIAQRDVEFFTELLAKETDENQRVILQRLLADAEQRRQSEDPVENSNKIPNAGQVNIKDD
Ga0209115_10004933	3300027567	Forest Soil	MVDKITAQRDVEYFYELLAKETDENQRVILQRLLAEAEKRRQSDDKEEDASTKSNAGQVNAKDD
Ga0208042_10045823	3300027568	Peatlands Soil	MVDKSTAQRDVEYFYELLAKETDENQRVILQRLLADAEKLRQSDDSEANSNKKTNAGRPDRKDD
Ga0208043_10063303	3300027570	Peatlands Soil	VQAIVDIITTQLDVEYFYELLAKETDENKRMILQRLVAEAERLRQSKDPEEDSNKTTNAGQVNIKDD
Ga0208043_10063306	3300027570	Peatlands Soil	KITAQRDVEYFTELLAKATDENQRVILQRLLDDAEKRRQSDDQEKK
Ga0209528_11240902	3300027610	Forest Soil	GRRLFRVQAMVDKITAQRDVEYFYELLAKETDENKRAILQRLLAEAEKLRQSDDQEENSNKKTNVD
Ga0209422_10491652	3300027629	Forest Soil	MVDKIIAQRDVEFFTELLAKETDENRRVILQRLLAEAEKLRQSDDQEENSNKKTNAGRVNVKEG
Ga0209625_10506123	3300027635	Forest Soil	MVDKITAQRDVEYFYELLAKETDENKRAILQRLLAEAEKLRQSDDKEENGNKKTNDDQVNSKDD
Ga0209420_10118203	3300027648	Forest Soil	MVDKITAQRDVEYFYELLAKETDENKRVILQRLLADAERLRQSEDEKSNKKTNADQVNSKGD
Ga0209011_10306333	3300027678	Forest Soil	MVDKITAQRDVEYFYELLAKETDENKRVILQRLLAEAEKLRQSDDQEENSNKKTSADQVNVKDV
Ga0209626_10048273	3300027684	Forest Soil	MVDKITAQRDVEYFYELLAKETDENKRAILQRLLAEAEKLRQSSDQENSNK
Ga0209655_101159141	3300027767	Bog Forest Soil	MVDKITAQRDVEYFYELLAKETDENKRVILQRLLADAEKLRQSDDQEENNNKKTNADQANIKDD
Ga0209580_10000003717	3300027842	Surface Soil	MVDKITAQRDVEYITELLAKETDENRRVILQRLLADAEKLRQSEDPEENSNKKTAAGQADSKDD
Ga0209274_100933151	3300027853	Soil	MVDKITAQRDVEFFYELLAKETDENQRVILQRLLADAEQRRQSEDPVENSNRKPNAGQVNIKGD
Ga0209274_104901691	3300027853	Soil	MVDKITAQRDVEYFYELLAKETDENQRVILQRLLEDAEKRRQTDDQEENSNKKRSADQVNIKGD
Ga0209693_100215202	3300027855	Soil	MVDKITAQRDVEFFYELLAKETDENQRVILQRLLADAEKRRQSEDPVENSNKKTNVD
Ga0209579_102870471	3300027869	Surface Soil	MVDKITAQRDVEYFYELLAKETDENQRVILLRLLADAEKLRQSDDPEANRNKNPNAGRSDSKDV
Ga0209380_101539002	3300027889	Soil	MVDKITAQRDVEYIYELLAKETDENQRVILQRLLADAERLRQSDNQQENSNKKTNAD
Ga0209380_101965323	3300027889	Soil	MVDKITAQRDVEYFYELLAKETDENKRVILQRLLADAEKLRQSDDPE
Ga0209380_102929021	3300027889	Soil	MVDKITAQRDVEYFYDLLAKETDENKRVILQRLLAEAEKRRQSDDQEENSSKKTNADQVDSEDG
Ga0209380_106276673	3300027889	Soil	MVDKITAQRDVEYFYELLAKETDENKRVILQRLLAEAEKLRQSA
Ga0209006_104164402	3300027908	Forest Soil	MVDKITAQRDVEYFYELLAKETDENKRAILQRLLAEAEKLRQSGDQEENSNK
Ga0209698_101242953	3300027911	Watersheds	MVDKITAQRDVEYFYELLAKETDENQRVILQRLLADAERLRQSEGPEENKNKKANADRVNSKGD
Ga0308309_103825072	3300028906	Soil	MVDKITAQRDVEYFYELLAKATDENQRVILQRLLAEAEKRRQSEDQEENSNKNKNTGQADVKGD
Ga0308309_109302003	3300028906	Soil	MVDKITAQRDVEYFYELLAKETDENKRVILQRLLADAERLRQSEDEKS
Ga0308309_114037961	3300028906	Soil	MVDKITAQRDVEYFYELLAKETDENKRAILQRLLAEAEKRRQTDDQEEKDSGTKANADQVNVKDS
Ga0265745_10059642	3300030759	Soil	MVDKITAQRDVEFFYELLAKETDENQRVILQRLLADAEQRRQSEDPVENSNKKPNAGQVNIKGD
Ga0170834_1013521023	3300031057	Forest Soil	MVDKITAQRDVEYFYELLAKETDENKRAILQRLLAEAEKLRQSDDQEENSNKKTNADQVNIKEG
Ga0265760_100076382	3300031090	Soil	MVDKITAQRDVEYFYELLAKETDENKRVILQRLLADAEKLRQSDDQEEKGDKNTKADQRNSKDD
Ga0265760_100076385	3300031090	Soil	MVDKITAQRDVEYFYELLAKETDENKRVILQRMLADAEKLRQSDDQEEKGDKNTKADQRDSKDD
Ga0265340_101857392	3300031247	Rhizosphere	MVDKITAQRDVEYFYELLAKETDENKRAILQRLLAEAEKLRQSDGQENSNK
Ga0170820_128045251	3300031446	Forest Soil	MVDKITAQRDVEYFYELLAKETDENKRAILQRLLAEAEKRRQTDDQQENRQ
Ga0310686_1075452032	3300031708	Soil	MVDKITAQRDVEYFYELLAKETDENKRTILQRLLAEAEKLRQSGDQEENSNK
Ga0310686_1077705681	3300031708	Soil	MVDKITAQRDVEYFYELLAKETDENKRVILQRLLAEAEKRRQSEDPEDQSNKKTHADAVNIKYE
Ga0310686_1147580203	3300031708	Soil	MRGQAMVDKITAQRDVEYFYELLAKETDENKRAILQRLLAEAEKLRQSKDQDEEKKQ
Ga0307476_1000061312	3300031715	Hardwood Forest Soil	MVDKITAQRDVEYFYELLAKETDENQRVILQRLLAEAEKLRQSDDREEAINKKPNAGQVDSKDD
Ga0307474_102770643	3300031718	Hardwood Forest Soil	MVDKITAQRDVEFFYELLAKETDENQRVILQRLLADAEQRRQSEDPVESSNKKPNAGQVNIKGD
Ga0311301_102355256	3300032160	Peatlands Soil	MVDKITAQRDVEYFYELLAKETDENKRAILQRLLAEAEKLRQSDHQDENSNKKTNADQVNVKDS
Ga0311301_102397005	3300032160	Peatlands Soil	MVDKITAQRDVEYFYELLAKETDENQRVILQRLLEDAEKRRQTEDAENQSNKKTNADQVNSKGD
Ga0311301_114690602	3300032160	Peatlands Soil	MVDKITAQRDVEYFYELLAKETDENQRVILQRLLADAEKLRQSDDPAENSNKKTDVDRADSKGD
Ga0311301_115157152	3300032160	Peatlands Soil	MVDKITAQRDVEYFTELLAKATDENQRVILQRLLADAEKRRQTDDPEDQSNKKTNFEQVNIKGD
Ga0348332_109034641	3300032515	Plant Litter	RRLIRVQAMVDKATAQRDVEYFTELLAKATDENQRVILQRLLDDAEKRRQSDDPEDQSNKKTNADRKGD
Ga0348332_137125562	3300032515	Plant Litter	MVDKITAQRDVEYFYELLAKETDENKRVILQRMLADAEKLRQSDDQEEKGDKNTKAGQRNSKDD
Ga0335078_115608212	3300032805	Soil	MVDKITAQRDVEYFYELLAKETDENQRVILLRLLADAEKLRQSDNPEANSNKNPNAGRVDNKGD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F038796

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences