Metagenome / Metatranscriptome Family F038841

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F038841
Family Type	Metagenome / Metatranscriptome
Number of Sequences	165
Average Sequence Length	57 residues
Representative Sequence	MTDKRMKVSLRIAFAMSRFSNVKALYEGFIVKINGRDWTVNIMMFGETTLALLAGNEPEE
Number of Associated Samples	121
Number of Associated Scaffolds	165

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	46.88 %
% of genes near scaffold ends (potentially truncated)	24.85 %
% of genes from short scaffolds (< 2000 bps)	86.06 %
Associated GOLD sequencing projects	111
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (58.182 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (29.091 % of family members)
Environment Ontology (ENVO)	Unclassified (26.061 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.879 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 27.27% Coil/Unstructured: 72.73%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 165 Family Scaffolds
PF06042	NTP_transf_6	4.85
PF13302	Acetyltransf_3	2.42
PF00484	Pro_CA	1.82
PF00929	RNase_T	1.21
PF00753	Lactamase_B	1.21
PF00072	Response_reg	0.61
PF07733	DNA_pol3_alpha	0.61
PF05532	CsbD	0.61
PF03976	PPK2	0.61
PF13519	VWA_2	0.61
PF01609	DDE_Tnp_1	0.61
PF08335	GlnD_UR_UTase	0.61
PF13610	DDE_Tnp_IS240	0.61
PF12762	DDE_Tnp_IS1595	0.61
PF00440	TetR_N	0.61
PF03050	DDE_Tnp_IS66	0.61
PF01738	DLH	0.61

COG ID	Name	Functional Category	% Frequency in 165 Family Scaffolds
COG3575	Uncharacterized conserved protein	Function unknown [S]	4.85
COG0288	Carbonic anhydrase	Inorganic ion transport and metabolism [P]	1.82
COG0587	DNA polymerase III, alpha subunit	Replication, recombination and repair [L]	0.61
COG2176	DNA polymerase III, alpha subunit (gram-positive type)	Replication, recombination and repair [L]	0.61
COG2326	Polyphosphate kinase 2, PPK2 family	Energy production and conversion [C]	0.61
COG2844	UTP:GlnB (protein PII) uridylyltransferase	Signal transduction mechanisms [T]	0.61
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.61
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	0.61
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.61
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.61
COG3436	Transposase	Mobilome: prophages, transposons [X]	0.61
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.61
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.61
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.61

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	58.18 %
Unclassified	root	N/A	41.82 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	58.18 %
Unclassified	root	N/A	41.82 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	58.18 %
Unclassified	root	N/A	41.82 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	48.48 %
Unclassified	root	N/A	41.82 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.61 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	44.85 %
Unclassified	root	N/A	41.82 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.61 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.82 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	36.97 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3.64 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.21 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.61 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.82 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	36.97 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1.82 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	1.21 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.21 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.61 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.82 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	36.97 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1.82 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.21 %
Arenibaculum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Arenibaculum	1.21 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.61 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.82 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	36.97 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1.82 %
Arenibaculum pallidiluteum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Arenibaculum → Arenibaculum pallidiluteum	1.21 %
Bradyrhizobium centrosematis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium centrosematis	1.21 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.61 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.61 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001545\|JGI12630J15595_10064750	Not Available	722	Open in IMG/M
3300002245\|JGIcombinedJ26739_100104264	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2658	Open in IMG/M
3300002245\|JGIcombinedJ26739_101351003	Not Available	605	Open in IMG/M
3300003505\|JGIcombinedJ51221_10010661	All Organisms → cellular organisms → Bacteria	2990	Open in IMG/M
3300003505\|JGIcombinedJ51221_10020226	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium centrosematis	2324	Open in IMG/M
3300004080\|Ga0062385_10287195	Not Available	936	Open in IMG/M
3300004080\|Ga0062385_10319406	All Organisms → cellular organisms → Bacteria	898	Open in IMG/M
3300004081\|Ga0063454_100953433	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	684	Open in IMG/M
3300004082\|Ga0062384_100000594	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	9469	Open in IMG/M
3300004091\|Ga0062387_100297206	All Organisms → cellular organisms → Bacteria	1038	Open in IMG/M
3300004091\|Ga0062387_100912114	Not Available	666	Open in IMG/M
3300005178\|Ga0066688_10150604	All Organisms → cellular organisms → Bacteria	1457	Open in IMG/M
3300005179\|Ga0066684_10781595	Not Available	633	Open in IMG/M
3300005187\|Ga0066675_10151386	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1592	Open in IMG/M
3300005332\|Ga0066388_101344724	Not Available	1236	Open in IMG/M
3300005434\|Ga0070709_11767453	Not Available	506	Open in IMG/M
3300005435\|Ga0070714_101609255	Not Available	634	Open in IMG/M
3300005435\|Ga0070714_102500641	Not Available	501	Open in IMG/M
3300005436\|Ga0070713_100257444	All Organisms → cellular organisms → Bacteria → Proteobacteria	1594	Open in IMG/M
3300005436\|Ga0070713_100656030	Not Available	999	Open in IMG/M
3300005436\|Ga0070713_100914991	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	844	Open in IMG/M
3300005437\|Ga0070710_10058229	All Organisms → cellular organisms → Bacteria → Proteobacteria	2191	Open in IMG/M
3300005445\|Ga0070708_100694493	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	958	Open in IMG/M
3300005445\|Ga0070708_101875662	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300005467\|Ga0070706_100688351	All Organisms → cellular organisms → Bacteria	948	Open in IMG/M
3300005467\|Ga0070706_100970610	All Organisms → cellular organisms → Bacteria	784	Open in IMG/M
3300005471\|Ga0070698_100238281	All Organisms → cellular organisms → Bacteria	1753	Open in IMG/M
3300005471\|Ga0070698_102243425	Not Available	500	Open in IMG/M
3300005536\|Ga0070697_100405161	Not Available	1184	Open in IMG/M
3300005552\|Ga0066701_10670013	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	625	Open in IMG/M
3300005921\|Ga0070766_10101929	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1701	Open in IMG/M
3300005921\|Ga0070766_10636324	Not Available	718	Open in IMG/M
3300006028\|Ga0070717_10323330	All Organisms → cellular organisms → Bacteria	1375	Open in IMG/M
3300006172\|Ga0075018_10258447	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	846	Open in IMG/M
3300006794\|Ga0066658_10938115	Not Available	501	Open in IMG/M
3300006796\|Ga0066665_10534890	Not Available	955	Open in IMG/M
3300006804\|Ga0079221_10654580	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	721	Open in IMG/M
3300006893\|Ga0073928_10054896	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3561	Open in IMG/M
3300006904\|Ga0075424_102040770	Not Available	605	Open in IMG/M
3300007255\|Ga0099791_10163319	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1044	Open in IMG/M
3300007258\|Ga0099793_10409804	Not Available	667	Open in IMG/M
3300007258\|Ga0099793_10424711	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	655	Open in IMG/M
3300007788\|Ga0099795_10569972	Not Available	536	Open in IMG/M
3300009137\|Ga0066709_100375258	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1964	Open in IMG/M
3300009143\|Ga0099792_10511268	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	753	Open in IMG/M
3300009143\|Ga0099792_10798328	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	618	Open in IMG/M
3300009143\|Ga0099792_11070831	Not Available	542	Open in IMG/M
3300009162\|Ga0075423_11625423	Not Available	695	Open in IMG/M
3300010046\|Ga0126384_10058942	Not Available	2681	Open in IMG/M
3300010046\|Ga0126384_10757201	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	866	Open in IMG/M
3300010048\|Ga0126373_10606999	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1147	Open in IMG/M
3300010359\|Ga0126376_10872968	Not Available	886	Open in IMG/M
3300010361\|Ga0126378_10165956	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2262	Open in IMG/M
3300010362\|Ga0126377_10303923	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1574	Open in IMG/M
3300010366\|Ga0126379_13038827	Not Available	561	Open in IMG/M
3300010399\|Ga0134127_11836939	Not Available	682	Open in IMG/M
3300011120\|Ga0150983_10563297	All Organisms → cellular organisms → Bacteria	1044	Open in IMG/M
3300011269\|Ga0137392_10400052	Not Available	1140	Open in IMG/M
3300011270\|Ga0137391_11457662	Not Available	530	Open in IMG/M
3300011271\|Ga0137393_10794608	Not Available	809	Open in IMG/M
3300012198\|Ga0137364_10757969	Not Available	733	Open in IMG/M
3300012200\|Ga0137382_10405732	Not Available	961	Open in IMG/M
3300012200\|Ga0137382_10446519	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	915	Open in IMG/M
3300012203\|Ga0137399_10254704	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1440	Open in IMG/M
3300012203\|Ga0137399_10749142	Not Available	822	Open in IMG/M
3300012205\|Ga0137362_10038794	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3825	Open in IMG/M
3300012205\|Ga0137362_10311327	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1363	Open in IMG/M
3300012205\|Ga0137362_10914887	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Arenibaculum → Arenibaculum pallidiluteum	749	Open in IMG/M
3300012208\|Ga0137376_10390705	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1208	Open in IMG/M
3300012361\|Ga0137360_10145345	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1873	Open in IMG/M
3300012362\|Ga0137361_11097530	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	716	Open in IMG/M
3300012362\|Ga0137361_11734487	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	543	Open in IMG/M
3300012363\|Ga0137390_10394842	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1362	Open in IMG/M
3300012363\|Ga0137390_10674690	Not Available	997	Open in IMG/M
3300012582\|Ga0137358_10239065	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1237	Open in IMG/M
3300012582\|Ga0137358_10245002	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1220	Open in IMG/M
3300012582\|Ga0137358_10406106	All Organisms → cellular organisms → Bacteria → Terrabacteria group	921	Open in IMG/M
3300012582\|Ga0137358_10546707	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	779	Open in IMG/M
3300012582\|Ga0137358_10901349	Not Available	580	Open in IMG/M
3300012683\|Ga0137398_10605735	Not Available	758	Open in IMG/M
3300012683\|Ga0137398_10991464	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	583	Open in IMG/M
3300012685\|Ga0137397_10294541	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1209	Open in IMG/M
3300012917\|Ga0137395_10840050	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Arenibaculum → Arenibaculum pallidiluteum	665	Open in IMG/M
3300012917\|Ga0137395_11104960	Not Available	561	Open in IMG/M
3300012918\|Ga0137396_10228530	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1371	Open in IMG/M
3300012918\|Ga0137396_11070034	Not Available	579	Open in IMG/M
3300012922\|Ga0137394_10366616	Not Available	1229	Open in IMG/M
3300012923\|Ga0137359_10304355	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1419	Open in IMG/M
3300012925\|Ga0137419_10765364	Not Available	788	Open in IMG/M
3300012989\|Ga0164305_10381656	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1072	Open in IMG/M
3300015054\|Ga0137420_1278923	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	807	Open in IMG/M
3300015245\|Ga0137409_10886861	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	728	Open in IMG/M
3300016357\|Ga0182032_10473310	Not Available	1026	Open in IMG/M
3300018468\|Ga0066662_12297171	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	567	Open in IMG/M
3300020170\|Ga0179594_10356538	Not Available	555	Open in IMG/M
3300020579\|Ga0210407_10193276	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1580	Open in IMG/M
3300020579\|Ga0210407_11277178	Not Available	549	Open in IMG/M
3300020580\|Ga0210403_10636077	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	859	Open in IMG/M
3300020581\|Ga0210399_10175859	All Organisms → cellular organisms → Bacteria → Proteobacteria	1776	Open in IMG/M
3300020581\|Ga0210399_10645009	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	873	Open in IMG/M
3300020581\|Ga0210399_10853984	Not Available	741	Open in IMG/M
3300020583\|Ga0210401_10394808	All Organisms → cellular organisms → Bacteria	1245	Open in IMG/M
3300020583\|Ga0210401_10629168	Not Available	935	Open in IMG/M
3300020583\|Ga0210401_10764339	Not Available	826	Open in IMG/M
3300021168\|Ga0210406_10032938	All Organisms → cellular organisms → Bacteria	4664	Open in IMG/M
3300021170\|Ga0210400_11501086	Not Available	534	Open in IMG/M
3300021178\|Ga0210408_10114054	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2128	Open in IMG/M
3300021180\|Ga0210396_10992768	Not Available	711	Open in IMG/M
3300021180\|Ga0210396_11024866	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	698	Open in IMG/M
3300021403\|Ga0210397_10127593	Not Available	1753	Open in IMG/M
3300021405\|Ga0210387_10060445	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	3074	Open in IMG/M
3300021406\|Ga0210386_10858447	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	778	Open in IMG/M
3300021407\|Ga0210383_10718396	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	858	Open in IMG/M
3300021432\|Ga0210384_10728179	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	887	Open in IMG/M
3300021432\|Ga0210384_10816358	Not Available	831	Open in IMG/M
3300021432\|Ga0210384_11720444	Not Available	533	Open in IMG/M
3300021474\|Ga0210390_10970216	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	696	Open in IMG/M
3300021475\|Ga0210392_10172075	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1495	Open in IMG/M
3300021478\|Ga0210402_11217857	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	680	Open in IMG/M
3300021560\|Ga0126371_10484091	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1385	Open in IMG/M
3300022531\|Ga0242660_1050857	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	903	Open in IMG/M
3300022557\|Ga0212123_10045369	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4133	Open in IMG/M
3300025906\|Ga0207699_10137615	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1601	Open in IMG/M
3300025910\|Ga0207684_10692930	All Organisms → cellular organisms → Bacteria → Proteobacteria	866	Open in IMG/M
3300025915\|Ga0207693_10101994	Not Available	2250	Open in IMG/M
3300025916\|Ga0207663_10995281	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	672	Open in IMG/M
3300025922\|Ga0207646_10328193	All Organisms → cellular organisms → Bacteria	1382	Open in IMG/M
3300025928\|Ga0207700_10553368	All Organisms → cellular organisms → Bacteria	1021	Open in IMG/M
3300025928\|Ga0207700_11351891	Not Available	634	Open in IMG/M
3300025929\|Ga0207664_11999437	Not Available	503	Open in IMG/M
3300026507\|Ga0257165_1074510	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	622	Open in IMG/M
3300026514\|Ga0257168_1130959	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	559	Open in IMG/M
3300026538\|Ga0209056_10627948	Not Available	542	Open in IMG/M
3300026551\|Ga0209648_10808028	All Organisms → cellular organisms → Bacteria → Proteobacteria	512	Open in IMG/M
3300026999\|Ga0207949_1000892	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium centrosematis	2289	Open in IMG/M
3300027076\|Ga0208860_1026912	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	597	Open in IMG/M
3300027173\|Ga0208097_1000533	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	2887	Open in IMG/M
3300027603\|Ga0209331_1074406	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	846	Open in IMG/M
3300027701\|Ga0209447_10138265	Not Available	669	Open in IMG/M
3300027795\|Ga0209139_10328643	Not Available	536	Open in IMG/M
3300027855\|Ga0209693_10501819	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	580	Open in IMG/M
3300027884\|Ga0209275_10167615	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1172	Open in IMG/M
3300027884\|Ga0209275_10380339	Not Available	794	Open in IMG/M
3300027889\|Ga0209380_10617733	Not Available	627	Open in IMG/M
3300027903\|Ga0209488_10102959	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2141	Open in IMG/M
3300027903\|Ga0209488_10341862	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1113	Open in IMG/M
3300027908\|Ga0209006_10125560	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2264	Open in IMG/M
3300028047\|Ga0209526_10154983	Not Available	1603	Open in IMG/M
3300028047\|Ga0209526_10311915	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1062	Open in IMG/M
3300028536\|Ga0137415_10238551	Not Available	1629	Open in IMG/M
3300028906\|Ga0308309_11405764	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	598	Open in IMG/M
3300029636\|Ga0222749_10630601	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	586	Open in IMG/M
3300031231\|Ga0170824_100667131	Not Available	744	Open in IMG/M
3300031231\|Ga0170824_101959925	Not Available	744	Open in IMG/M
3300031231\|Ga0170824_128715371	Not Available	652	Open in IMG/M
3300031469\|Ga0170819_11236249	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1199	Open in IMG/M
3300031474\|Ga0170818_106269419	All Organisms → cellular organisms → Bacteria	1488	Open in IMG/M
3300031573\|Ga0310915_10360008	Not Available	1032	Open in IMG/M
3300031740\|Ga0307468_102030461	Not Available	552	Open in IMG/M
3300032180\|Ga0307471_101573057	Not Available	814	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.79%
Host-Associated	Host-Associated	1.21%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.73%
Aquatic	Environmental → Aquatic	6.06%
Plants	Host-Associated → Plants	1.21%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	92.73%
Freshwater	Environmental → Aquatic → Freshwater	4.24%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.21%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.21%
Sediment	Environmental → Aquatic → Sediment	0.61%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	65.45%
Loam	Environmental → Terrestrial → Soil → Loam	27.27%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.24%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.21%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.21%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.61%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	35.15%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	23.64%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	13.94%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.73%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.06%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	4.24%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.21%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.21%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.61%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.61%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.61%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	29.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.79%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	12.12%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	7.88%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.85%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	4.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.24%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.24%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.03%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.82%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.82%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.21%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.21%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.21%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.61%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.61%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.61%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.61%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.61%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022531	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026507	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-B	Environmental	Open in IMG/M
3300026514	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026999	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF044 (SPAdes)	Environmental	Open in IMG/M
3300027076	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF012 (SPAdes)	Environmental	Open in IMG/M
3300027173	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF036 (SPAdes)	Environmental	Open in IMG/M
3300027603	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027701	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027795	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12630J15595_100647501	3300001545	Forest Soil	RSFLFHVSRMTDKRMKVSLRMAFTMTSFSNVKPLYEGFAVTINGREWTVNIMMLGETGLAMIAGNKFEN*
JGIcombinedJ26739_1001042642	3300002245	Forest Soil	MKVSLRMAFTMTSFSNVKPLYEGFAVTINGREWTVNIMMLGETGLAMIAGNKFEN*
JGIcombinedJ26739_1013510032	3300002245	Forest Soil	NRMTDKRMKVSLRIAFAMSRFSNVKALHEGFIVKINGRDWTVNIMMFGETTLALLAGNEPEE*
JGIcombinedJ51221_100106612	3300003505	Forest Soil	MTDKRMKVSLRIAFAMSRFSNVKALYEGFVVKINGRDWTVNIMMFGETTLALLAGNEPEE
JGIcombinedJ51221_100202264	3300003505	Forest Soil	YVTRMTDKRMKVSLRIAFAMSRFSNVRVLYEGFIVKINGRDWTVNIMMFGETTLALLAGNEPEE*
Ga0062385_102871952	3300004080	Bog Forest Soil	MKVSLRIAFAIIRLSNVKALYEGFIVKINCRDWTVNIMMFGETTLALLAGNEPEE*
Ga0062385_103194061	3300004080	Bog Forest Soil	MMDKRMKVSLRMAFTMTNFSDVKPLYDGFIVAINGRNWTINIMMFGETTLALLAGNEPGQ
Ga0063454_1009534331	3300004081	Soil	MHVRSLVIRQKSLRMTDNRKTVSLRMAFSMSSCPNVQPLYEGFIVKINGRNWTINTMMLRETALALLAGNE
Ga0062384_1000005941	3300004082	Bog Forest Soil	SLRMAFTMTNFSDVKPLYDGFIVAINGRNWTINIMMFGETTLALLAGNEPGQ*
Ga0062387_1002972062	3300004091	Bog Forest Soil	MRVRRPVNRMMDKRMKVSLRMAFTMTNFSDVKPLYDGFIVAINGRNWTINIMMFGETTLALLAGNEPGQ*
Ga0062387_1009121141	3300004091	Bog Forest Soil	MAFSMSSCSNVKPLYEGFIVKINGRDWTINTMMLEETALALLAGNKPEE*
Ga0066688_101506041	3300005178	Soil	MTDKRMKVSLRMAFTMTSFSNVKPLYEGFIIKINGRYWTVNIMMLGETALALLAGDEPEE
Ga0066684_107815952	3300005179	Soil	MFMGMTDKRVKVSLRMAFTMPSFSNIKPLYEGFVVKINGRDWTVNIMIFGETTLALLAGHEP*
Ga0066675_101513862	3300005187	Soil	MFYVNGMPYKRMKVSLRTAFAMTRYSNAKALYEGLIIEIGLNIMMFGETTLALLAGSEAEE*
Ga0066388_1013447243	3300005332	Tropical Forest Soil	MTMTSFSNVQPLYKGFVVKINGRYWTVNIMMVGETTLALLAGNEPEE*
Ga0070709_117674532	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MLYKRMKVSIRTAFVMDRHSNAKALYESFLVTTNGRDWAVNITIFGETTLALLAGN*
Ga0070714_1016092552	3300005435	Agricultural Soil	MKVSLRIAFAMSRFSNVKALYEGFIVKINGRDWTVNIMMFGETTLALLAGNEPEE*
Ga0070714_1025006411	3300005435	Agricultural Soil	MTYKRMKVSLRMAFTMTRFSSVKPLYEGFIVKINDRDWTVNIMMHGEIGLALIAGNEFER
Ga0070713_1002574444	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MKVSLRMVFTMSSSSNAKPLYEGFIVKINGRDWTVNIMMVGETTLALLAGNEPEE*
Ga0070713_1006560302	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MKVSLRIAFAMNRFSNVKALYEGFVVKINGRYWTVNILMFGETTLALLAGNEPEE*
Ga0070713_1009149913	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MIDKRMKVSLRMVLAMTYLSDVKALYDGFIVTINGRNWTINVMM
Ga0070710_100582293	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MRLLFYVTRMTDKRMKVSLRIAFAMSRFSNVKVLYEGFIVKINGRDWTVNIMMFGETTLALLAGNEPEE*
Ga0070708_1006944931	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MTDKRMKISLRMAFTMTSFSNVKPLYEGFVVEINGRDWTVNIMMFGETALALLAGNEPEE
Ga0070708_1018756621	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VSLRMVLAMTYLSNVKALYDGFIVTINGRDWTINVMMCGETTLALLAGNEPEE*
Ga0070706_1006883513	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	TMASFSNVKPQYEDIVKINGRDWTVNIMMFGETALALLAGNEPEE*
Ga0070706_1009706101	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	SSRPLIHVWRPVNRMIDKRMKVSLRMVLAMTYLSDVKALYDGFIVTINGRDWTINVMMCGETTLALLAGNEPEE*
Ga0070698_1002382813	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MVLAMTYLSDVKALYDGFIVTINGRDWTINVMMCGETTLALLAGNEPEE*
Ga0070698_1022434251	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MKVSLRMAFTMTSFSNVKPLYEGFAVTINGREWTVNIMMLGENGLAMIAGNEFDFGYPRS
Ga0070697_1004051611	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VTDETIKVSLRMAFSMTNVLNVEPTCHGFIIETNGRDWTVNIMMLGETALALVAGHEPLE
Ga0066701_106700131	3300005552	Soil	MKVSLRMAFTMTSFSNVKPLYEGFIIKINGRYWTVNIMMLGETALALLAGDEPEE*
Ga0070766_101019295	3300005921	Soil	MKVSLRIAFAMSRFSNVKALYEGFVVKINGRDWTVNIMMFGETTLALLAGNEPEE*
Ga0070766_106363241	3300005921	Soil	LFYVNRMTDKRMKVSLRIALAMSRLSNVKVLYESFIVKMNGRDWTVNIMMFGETTLALLAGNEPEE*
Ga0070717_103233302	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MIDKRMKVSLRMVLAMTYLSNVKALYDGFIVTINGRDWTINVMMCGETTLALLAGNEPEE
Ga0075018_102584472	3300006172	Watersheds	MKVSLRIAFAMSRFSNVKALHEGFIVKINGRDWTVNIMMFGETTLALLAGNEPEE*
Ga0066658_109381151	3300006794	Soil	MTYKRMKVSLRMAFTMTRFSSVKPLYEGFIVKINDRDWTVNIMMLGETALALLAGDEPEE
Ga0066665_105348902	3300006796	Soil	MKVSLRMAFTMTSFSNVKPLYERFIIEINGRCWTVNIMMLGETALALLAGDEPEE*
Ga0079221_106545802	3300006804	Agricultural Soil	MTDKPMRVSLRMTFTMTGFSNAEPLYEGFVVKINGRDWTVNIMMVGETILALLSGNEPEE
Ga0073928_100548965	3300006893	Iron-Sulfur Acid Spring	MFVGITDKRVKVSLPMAFTMPSFSNIKPLYGGFVKINGRDWTVDIVMFGETTLALLAGNQPED*
Ga0075424_1020407702	3300006904	Populus Rhizosphere	MTDDRMKVTLRMVFTITSHSNVQPLYQGFVVKINGRYWTVNIMRMDETTLALLAGHEPEG
Ga0099791_101633192	3300007255	Vadose Zone Soil	MTDKRMKVSLRMAFTMTSFSNVKPLYEGFIIKINGRYWTVNIMMLGETELALLAGDEPEE
Ga0099793_104098041	3300007258	Vadose Zone Soil	MKVSLRMAISMTSVLNVEPIYHGFIIETNGREWTVNIMMLGETTLALVAGHEPLE*
Ga0099793_104247112	3300007258	Vadose Zone Soil	MKVSLRMAFTMTSVSNIKPLYDGFVVTINGREWTVNI
Ga0099795_105699722	3300007788	Vadose Zone Soil	MTGKRKTVSLRMAFSMSSCSNVKPLNEGFIFEINGRDWTINTMMLGETALALLAGNEPEE
Ga0099795_106054181	3300007788	Vadose Zone Soil	MTSFSNVKPLYEGFIIKINGRYWTVNIMMLGETALALLAGDEPEE*
Ga0066709_1003752582	3300009137	Grasslands Soil	MTDKRMKVSLRMAFTMTSFSNVKPLYERFIIEINGRCWTVNIMMLGETALALLAGDEPEE
Ga0099792_105112682	3300009143	Vadose Zone Soil	MTYKKMKVSLRMAFTMTRFSSVKPLYEGFIVKINDRDWTVNIMVHGEIGLVLIAGNEF
Ga0099792_107983281	3300009143	Vadose Zone Soil	MTDKRKTVSLRMAFSMSSCSNVKPLYEGFIVKINGRDWTINTMMLGETALAL
Ga0099792_110708312	3300009143	Vadose Zone Soil	MTDERKTVSLRMAFSMSSCSNVKPLYEGFIVEINGRDWTINTMMLGETALALLAGNEPEE
Ga0075423_116254231	3300009162	Populus Rhizosphere	MTDNRIKVSLRMVFTMTGDSNVQPLYKGFVVKINGRYWTVNLMMVGETTLALLAGNEREE
Ga0126384_100589423	3300010046	Tropical Forest Soil	MSFTMTMTSFSNVQPLYKGFVVKINGRYWTVNIMMVGETTLALLAGNEPEE*
Ga0126384_107572013	3300010046	Tropical Forest Soil	MTDERMKVSLRTAFIMTSFSNAKPLYEGFVVKINGRAWTVNIMMIGETT
Ga0126373_106069991	3300010048	Tropical Forest Soil	MTDERMKVSLRMAFTMTSFSNVKPLYEGFVVKINGRAWTVNIMMIGETALALLAGSEPEE
Ga0126376_108729681	3300010359	Tropical Forest Soil	FTMTNLSNVQPLYEGFVVKINGRDWTVSIMMVGETILALLAGNEPEE*
Ga0126378_101659564	3300010361	Tropical Forest Soil	MTDERMKVSLRMAFTMTSFSNVKPLYEGFVVKINGRAWTVNIMMIGETALALLAGGEPEE
Ga0126377_103039233	3300010362	Tropical Forest Soil	MTMTSFSNVQPLYKGFVVKINGRYWTVNIMMIGETTLALLAGNEPEE*
Ga0126379_130388272	3300010366	Tropical Forest Soil	FTMTMTSFSNVQPLYKGFVVKINGRYWTVNIMMVGETTLALLAGNEPEE*
Ga0134127_118369391	3300010399	Terrestrial Soil	VSRMTDNRMKVSLRMVFTKISNSNVQPLHKGFVDKINGRDWTINIMMVGETVLALLAGNEPEE*
Ga0150983_105632972	3300011120	Forest Soil	MTDKRMKVSLRIAFAMIRFSNVKVLYEVFIVKINGRDWTVNIMMFGETTLALLAGNEPEE
Ga0137392_104000522	3300011269	Vadose Zone Soil	MAFSMTNVLNVEPTYHGFIIETNGRDWTVNIMMLGETALALVAGHEPLE*
Ga0137392_112315681	3300011269	Vadose Zone Soil	MASFSNVKPLFEGFVVKTNGLDWTVNIMMFGETALALLAGNEPEE*
Ga0137391_114576622	3300011270	Vadose Zone Soil	MKVSLRMAFTMASFSNVKPLYEGFIVKTNGRDWTVNIMMFGETVLALVAGNEPEE*
Ga0137393_107946082	3300011271	Vadose Zone Soil	MTDKRMKVSLSMAFTMASFSNVKPLFEGFVVKTNGLDWTVNIMMFGETGLALLAGDEPEE
Ga0137364_107579692	3300012198	Vadose Zone Soil	MTDKRMKVSLRMAYTMTSFSNVKPPHEGFIIKINGRYWTVNIMMLGETALALLAGDEPEE
Ga0137382_104057322	3300012200	Vadose Zone Soil	MAYKKMKVSLRMAFTMTRFSSVKPLYEGFIVKINDRDWTVNIMMHGEIGLALIAGNEFER
Ga0137382_104465191	3300012200	Vadose Zone Soil	MAYKKMKVSLRMAFTMTPFSSLKPLNEGFIVKINDRDWTVNIMMLGEAGLAL
Ga0137399_102547042	3300012203	Vadose Zone Soil	MTDKRMKVSLRMAFTMTSFSNIKPLYDGFVVTINGREWTVNIMMFGETVLALVAGNEPEE
Ga0137399_107491422	3300012203	Vadose Zone Soil	MKVSLRMAFTMTSFSNVKPLYEGFAVTINGREWTVNIMMLGETGLALIAGNEFEN*
Ga0137362_100387943	3300012205	Vadose Zone Soil	MTDKRMKVSLRMAFTMTSFSNVKPLYEGFIIEINGRYWTVNIMMLGETALALLAGDEPEE
Ga0137362_103113272	3300012205	Vadose Zone Soil	MKVSLRMAFSLTSVLNVEPIYHGFIIETNGRDWTVNIMMLGETALALVAGHEPLE*
Ga0137362_109148872	3300012205	Vadose Zone Soil	MTDKRMKVSLRMAFTMTSFSNVKALYEGFVVTINGREWTVNIMMFGETALALLAGNEPEE
Ga0137376_103907053	3300012208	Vadose Zone Soil	MKVSLRMAFTMTRFSSVKPLYEGFIVKINDRDWTVNIMMLGEAGLALLAGNEFEE*
Ga0137360_101453453	3300012361	Vadose Zone Soil	MTCKRMKVSLRMAFTMTRFSSVKPLYEGFIVKINDRDWTVNIMMHGEIGLALIAGNEFER
Ga0137361_110975302	3300012362	Vadose Zone Soil	MKVSLRMAFTMTSFSNVKPLYEGFIIKINGRYWTVNIMMLGETALALLA
Ga0137361_117344871	3300012362	Vadose Zone Soil	MTDKRMKVSLRMAFTMTSFSNVKPLYEGFIIKINGRYWTVNIMMLGETALALLA
Ga0137390_103948421	3300012363	Vadose Zone Soil	MTDKRMKVSLRMAFTMTSFSNVKPLYEGFAVTINGREWTVNIMMLGETGLALIAGNEF
Ga0137390_106746901	3300012363	Vadose Zone Soil	MTDKRMKVSLRMAFTMASFSNVKPLYEGFIVKTNGRDWTVNIMMFGETVLALVAGNEPEA
Ga0137358_102390653	3300012582	Vadose Zone Soil	MTDERMKVSLRIAFAMIRLSNVKALYEGFIVKINGRDWTVNIMMFGETTLALLAGNEPEE
Ga0137358_102450022	3300012582	Vadose Zone Soil	MTDKRKTVSLRMAFSMSSCSNVKPLYEGFIVKINGRDWTINTMMLGETALALLAGNEPEE
Ga0137358_104061062	3300012582	Vadose Zone Soil	RMAFSMSGCSSVKLLYEGFIVEINGRDWTINTMMLGETALALLAGNEPEE*
Ga0137358_105467071	3300012582	Vadose Zone Soil	MKVSLRMAFTMTRFSSVKPLYEGFIVKISDRDWTVNIMVHGEIGLA
Ga0137358_109013491	3300012582	Vadose Zone Soil	MTYKRMKVSLRMAFTMTRFSSVKPLYEGFAVTINGREWTVNIMMLGETGLALIAGNEFEN
Ga0137398_106057352	3300012683	Vadose Zone Soil	MTDKRMKVSLRIEFAMSRFSNVKVLYEGFTVKINRRDWTVNIMMFGETTLALLAGNEPEE
Ga0137398_109914641	3300012683	Vadose Zone Soil	MKVSLRMAFTMTRFSSVKALYEGFIVKTNDRDWTVNIMVLGETGLT
Ga0137397_102945411	3300012685	Vadose Zone Soil	MTDKRMKVSLRMAFTMTSFSNVKPLYEGFIIEINGRYWTVNIMMLGETALALLAGDEPGE
Ga0137395_108400502	3300012917	Vadose Zone Soil	MTDKTMKVSLRMAFTMTSFSNVKPLYEGFIIKINGRYWTVNIMMLGETALALLAGDEPEE
Ga0137395_111049601	3300012917	Vadose Zone Soil	MTDKRMKVSLRMAFTMASFSNVKPLYEGFVVIINGREWTVNIMMLGETGLAMIAGNEFEN
Ga0137396_102285303	3300012918	Vadose Zone Soil	MKVSLRMAISMTSVLNVEPSYHGFIIETNGREWTVNIMMLGETTLALVAGHEPLE*
Ga0137396_110700342	3300012918	Vadose Zone Soil	ETMKVSLRMAISMTSVLNVEPIYHGFIIETNGREWTVNIMMLGETALALVAGHEPLE*
Ga0137394_103666162	3300012922	Vadose Zone Soil	MKVSLRMAISMTSVLNVEPIYHGFIIEIIGREWTVNIMMLGETTLALVAGHEPLE*
Ga0137359_103043553	3300012923	Vadose Zone Soil	MKVSLRMAISMTSVLNVEPIYHGFIIETNGREWTVNIMMLGEITLALVAGHEPLE*
Ga0137419_107653641	3300012925	Vadose Zone Soil	MAISMTSVLNVEPSYHGFIIETNGREWTVNIMMLGETTLALVAGHEPLE*
Ga0137404_106294441	3300012929	Vadose Zone Soil	MTSFSNVKPLYEGFIIEINGRYWTVNIMMLGETALALLAGDEPEE*
Ga0164305_103816562	3300012989	Soil	MTDKRMKVSLRIAFAMSRFSNVKALHEGFIVKINGRDCTVNIMMFSETTWALLAGNEPEE
Ga0137420_12789231	3300015054	Vadose Zone Soil	MKVSLRMAFTMTSLSNVKPLYEGFIIKINGRYWTVNIMMLGETALALLAGDEPEE*
Ga0137409_108868612	3300015245	Vadose Zone Soil	VSLHIAFSMTNVLNVEPTYHGFIIETNARDWTVNIMMLGETALALVAGHEPLE*
Ga0182032_104733102	3300016357	Soil	MAFVMTSFSNVKPLYEGFAVQINGQDWTINIMMFGETSLALVAGNEPEE
Ga0066662_122971711	3300018468	Grasslands Soil	MFMGMTDKRVKVSLRMAFTMPSFSNIKPLYEGFVVKINGRDWTVNIMIFGETTLALLAGHEP
Ga0179594_103565382	3300020170	Vadose Zone Soil	MKVSLRMAFTMTSFSNVKPLYEGFIIKINGRYWTVNIMMLGETALALLAGDEPEE
Ga0210407_101932761	3300020579	Soil	MDSRSLLFYVNRMTDKRMKVSLRMAFTMTSFSNVKPLYEGFIIEINGRYWTVNIMMLGETALALLAGDEPEE
Ga0210407_112771782	3300020579	Soil	MTDKRMKVSLRMAFTMTSFSNVKPLYEGFAVTINGREWTVNIMMLGETGLAMIAGNKFEN
Ga0210403_106360771	3300020580	Soil	MDSRSLLFYVNRMTDKRMKVSLRMAFTMTSFSNVKPLYEGFIIKINGRYWTVNIMMLGETALALLAGDESEE
Ga0210399_101758593	3300020581	Soil	MTDKRMRVSLRVAITMTSFSNVKPQYEGFIVKINGRDWTVNIMMFGETALALLAGNEPEE
Ga0210399_106450092	3300020581	Soil	MTDKRMKVSLRIAFAMSRFSNVKALYEGFIVKINGRDWTVNIMMFGETTLALLAGNEPEE
Ga0210399_108539842	3300020581	Soil	MKVSLRMAFTMTSFSNVKPLYEGFIIEINGRYWTVNIMMLGETALALLAGDEPEE
Ga0210401_103948083	3300020583	Soil	MTDKRMKVSLRIAFAMSRFSNVKALHEGFIVKINGRDWTVNIMMFGETTLALLAGNEPEE
Ga0210401_106291683	3300020583	Soil	MTYKRMKVSLRMAFTMTRFSSVKPLYEGFIVKINDRDWTVNIMMHGEIGLALIAEYEFER
Ga0210401_107643391	3300020583	Soil	KRMKVSLRIAFAMSRFPNVKVLYEGFILKMNGRDWTVNIMMFGETTLALLAGNEPEE
Ga0210406_100329385	3300021168	Soil	MKVSLRIAFAMSRFSNVKALYEGFIVKINGRDWTVNIMMFGETTLALLAGNEPEE
Ga0210400_115010862	3300021170	Soil	MTDKRMKVSLRIAFAMSRFPNVKVLYEVFFVKINGRDWTVNIMMFGETTLGIAGG
Ga0210408_101140544	3300021178	Soil	MKVSLRMAFTMTSFSNVKPLYEGFAVTINGREWTVNIMMLGETGLAMIAGNKFEN
Ga0210396_109927682	3300021180	Soil	MTNKRMKVSLRIAFAMSRFSNVKALHEGFIVKINGRDWTVNIMMFGETTLALLAGNEPEE
Ga0210396_110248662	3300021180	Soil	MAYKKMKVPLRMAFTMTRFSSVKPLYESFIVKINDRDWTVNIMMHGEIGLALIAEYEFER
Ga0210397_101275931	3300021403	Soil	MTDKRMRVSLRVAITMTSFSNVKPQYEGFIVKINGRNWTVNIMMFGETALALLAGNEPEE
Ga0210387_100604454	3300021405	Soil	MTDKRMKVSLSISLEMSRFSNVNALYEGFVVKINGRDWTVNIMMFGETTLALLAGNEPEE
Ga0210386_108584472	3300021406	Soil	LFYVTRMTDKRMKVSLRIAFAMSRFPNVKVLYEVFFVKINGRDWTVNIMMFGETTLGIAG
Ga0210383_107183961	3300021407	Soil	CLRISFVMSRFSNVKALHEGFIVKINGRDWTVNIMMFGETTLALLAGNEPEE
Ga0210384_107281791	3300021432	Soil	MACSMTKFSNVKPLYQGFIVEINGQDWAINVMMFGETVLALLAGNEPEE
Ga0210384_108163582	3300021432	Soil	MWTLVMRQMEVSLRMAFTMTSCSNVKPLCEGFIVKINGRDWTVNIMMFGETALALLAGNEPEE
Ga0210384_117204441	3300021432	Soil	VTDETIKVSLRMAFSMTNVLNVEPTYHGFIIETNGRDWTVNIMMLGETALALVAGHEPLE
Ga0210390_109702161	3300021474	Soil	MTDKRMKVSLRIAFAMNRFSNVKVLYEGFIVKINGRDWTVNIMMFGETTLALLAGNEPEE
Ga0210392_101720754	3300021475	Soil	MTDKRMKVSLRIAFAMSRFSNVKALYEGFIVKINGRDWTVNIMMLGETTLALLAGNEPEE
Ga0210402_112178572	3300021478	Soil	MKVSLRMAFTMTSFSNVKPLYEGFAVTINGREWTVNIMMLGETGL
Ga0126371_104840911	3300021560	Tropical Forest Soil	MKVSVRMVFTMTTVSNAKPLYEGFIVKINGHDWTVNIMVIGETTLAVLAGNESEE
Ga0242660_10508571	3300022531	Soil	SFAMSRFLNVNALYDGFVVKINGRDWTVNIMMFGETTLALLAGNEPEE
Ga0212123_100453696	3300022557	Iron-Sulfur Acid Spring	MFVGITDKRVKVSLPMAFTMPSFSNIKPLYGGFVKINGRDWTVDIVMFGETTLALLAGNQPED
Ga0207699_101376151	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MKVSLRIAFAMNRFSNVKALYEGFVVKINGRDWTVNIMMFGETTLA
Ga0207684_106929301	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	KRMKVSLRMVLAMTYLSNVKALYDGFIVTINGRDWTINVMMCGETTLALLAGNEPEE
Ga0207693_101019944	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MKVSLRIAFAMNRFSNVKALYEGFEVKINGRYWTVNILMFGETTLALLAGNEPEE
Ga0207663_109952812	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MTDKRMKVSLRIAFTMNRFSNVKALYEGFVVKINGRYWTVNILMFGETTLALLAGNEPEE
Ga0207646_103281932	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MIDKRMKVSLRMVLAMTYLSDVKALYDGFIVTINGRDWTINVMMCGETTLALLAGNEPEE
Ga0207700_105533682	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MIDKRMKVSLRMVLAMTYLSDVKALYDGFIVTINGRNWTINVMMCGETTLALLAGNEPEE
Ga0207700_113518912	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MTDKRMKVSLRIAFAMNRFSNVKALYEGFVVKINGRYWTVNILMFGETTLALLAGNEPEE
Ga0207664_119994373	3300025929	Agricultural Soil	IAFAMSRFSNVKALYEGFIVKINGRDWTVNIMMFGETTLALLAGNEPEE
Ga0257165_10745102	3300026507	Soil	MKVSLRMAFTMASFSNVKPLYEGFIVKTNGRDWTVNIMMFGETVLALVAGNEPEA
Ga0257168_11309592	3300026514	Soil	MKVSLRMAFTMASFSNVKPLYEGFIVKTNGRDWTVNIMMFGETVLALVAGNETE
Ga0209056_106279481	3300026538	Soil	RMTYKKMKVSLRMAFTMTRFASVKPLYEGFIVKINDRDWTVNIMMHGEIGLALIAGNEFE
Ga0209648_108080281	3300026551	Grasslands Soil	KPMRVSLRMAFTMTSFSNAKPLYEGFVVKINGRDWTVNIMMVGETTLALLAGNEPEE
Ga0207949_10008926	3300026999	Forest Soil	IAFAMSRFSNVKALYEGFVVKINGRDWTVNIMMLGETTLALLAGNEPEE
Ga0208860_10269122	3300027076	Forest Soil	MTDKSMKVSLRIAFAMSRFSNVRVLYEGFIVKINGRDWTVNIMMFGETTL
Ga0208097_10005334	3300027173	Forest Soil	MKVSLRIAFAMSRFSNVKALYEGFVVKINGRDWTVNIMMFGETTLALLAGNEPEE
Ga0209331_10744061	3300027603	Forest Soil	MSDKRIKVSLRMAFTMTSFPNVKPLYEGFVVTINGREWTVNIMMLGETGLAMIAGNEFEN
Ga0209447_101382652	3300027701	Bog Forest Soil	MRVRRPVNRMMDKRMKVSLRMAFTMTNFSDVKPLYDGFIVAINGRNWTINIMMFGETTLALLAGNEPGQ
Ga0209139_103286431	3300027795	Bog Forest Soil	MTDKRKTVSLRMAFSMSSCSNVKPLYEGFIVKINGRDWTINTMMLEETALALLAGNKPEE
Ga0209693_105018192	3300027855	Soil	MTDKRMKVCLRIAFAMSRFSNVKALHEGFIVKINGRDWTVNIMMFGETTLALLAGNEPEE
Ga0209275_101676153	3300027884	Soil	MKVSLRIAFAMSRFSNVKALYEGFVVKINGRDWTVNIMMFGETTLTLLAGNEP
Ga0209275_103803393	3300027884	Soil	SLRIAFAMSRFSNVKALYEGFVVKINGRDWTVNIMMFGETTLALLAGNEPEE
Ga0209380_106177332	3300027889	Soil	MTDKRMKVSLRIALAMSRLSNVKVLYESFIVKMNGRDWTVNIMMFGETTLALLAGNEPEE
Ga0209488_101029593	3300027903	Vadose Zone Soil	MKVSLRMAFTMASFSNVKPLYEGFIVKTNGRDWTVNVMMFGETVLALVAGNEPEE
Ga0209488_103418622	3300027903	Vadose Zone Soil	MTDERKTVSLRMAFSMSSCSNVKPLYEGFIVKINGRDWTINIMMLGETALALLAGNEPEE
Ga0209006_101255602	3300027908	Forest Soil	MTDKRMKVSLRIAFAMSRFSNVRVLYEGFIVKINGRDWTVNIMMFGETTLALLAGNEPEE
Ga0209526_101549832	3300028047	Forest Soil	VTDETIKVSLRMAFSMTNVLNVEPTYHGFIIETDGRDWTVNIMMLGETALALVAGHEPLE
Ga0209526_103119153	3300028047	Forest Soil	MTYKRMKVSLRMAFTMTRFSSVKPLYEGFIVKINDRDWTVNIMMLGEIGLALIAGNEFER
Ga0137415_102385512	3300028536	Vadose Zone Soil	MKVSLRMAISMTSVLNVEPSYHGFIIETNGREWTVNIMMLGETTLALVAGHEPLE
Ga0308309_114057641	3300028906	Soil	MTDKRMKVSLRIAFAMSRFSNVKALYEGFIVKINGRDWTVNIMMFGETTL
Ga0222749_106306012	3300029636	Soil	MTDKRMRVSLRVAITMTSFSNVKPQYEGFIVKMNDRDWTVNIMMFGETALALLAGNEPEE
Ga0170824_1006671312	3300031231	Forest Soil	MDSRSLLLYVNRMTDKRMKVSLRMAFTMTSFSNVKPLYEGFIIKINGRDWTVNIMMLGETALALLAGDEPEE
Ga0170824_1019599251	3300031231	Forest Soil	MAFSMTNVLNVEPTYHGFIIETNGRDWTINIMMLGETALALVAGHEPLE
Ga0170824_1287153712	3300031231	Forest Soil	MTDKRMRVSVRVAITMTSFSNVKPQYEGFIVKINGRDWTVNIMMFGETALALLAGNEPEE
Ga0170819_112362493	3300031469	Forest Soil	MDSRNLLFYVNRMTDKRMKVSLRMAFTMTSFSNVKPLYEGFIIKINGRYWTVNIMMLGETALALLAGDEPEE
Ga0170818_1062694192	3300031474	Forest Soil	MDSRNLLFYVNRMTDKRMKVSLRMAFTMTSFSNVKPLYEGFIIKINGRDWTVNIMMLGETALALLAGDEPEE
Ga0310915_103600081	3300031573	Soil	MAFVMTSFSNVKPLYEGFAVEINGQDWTINIMMFGETSLALVAGNEPEE
Ga0307468_1020304611	3300031740	Hardwood Forest Soil	VTDETIKVSLRIAFSMTNVLNVEPAYHGFIIEINGRDWTVNIMMLGETALALVAGHEPLE
Ga0310912_111057761	3300031941	Soil	MAFVMTSFSNVKPLYEGFAVEINGQDWTINIMMFGETSLAL
Ga0307471_1015730571	3300032180	Hardwood Forest Soil	MTDKRMKVSLCLAFAMSRLSNVKALYEGFIVKINGRDWTVNIMMFGETTLALLAGNEPEE
Ga0318519_108634232	3300033290	Soil	MAFVMTSFSNVKPLYEGFAVEINGQDWTINIMMFGETSL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F038841

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences