NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F038846

Metagenome / Metatranscriptome Family F038846

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F038846
Family Type Metagenome / Metatranscriptome
Number of Sequences 165
Average Sequence Length 69 residues
Representative Sequence LLPDDQQLLSDQQLRDASDEQLQDLIARVDLLLRSKGQPGLTLRPPEDEPDTPEPTDPSDPGTIGTE
Number of Associated Samples 47
Number of Associated Scaffolds 165

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 82.42 %
% of genes near scaffold ends (potentially truncated) 26.06 %
% of genes from short scaffolds (< 2000 bps) 81.82 %
Associated GOLD sequencing projects 47
AlphaFold2 3D model prediction Yes
3D model pTM-score0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (58.788 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil
(70.909 % of family members)
Environment Ontology (ENVO) Unclassified
(70.909 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(79.394 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 24.21%    β-sheet: 0.00%    Coil/Unstructured: 75.79%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.44
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 165 Family Scaffolds
PF00805Pentapeptide 8.48
PF02661Fic 1.82
PF10648Gmad2 1.21
PF12728HTH_17 1.21
PF14023DUF4239 1.21
PF00582Usp 0.61
PF06441EHN 0.61
PF13730HTH_36 0.61
PF08281Sigma70_r4_2 0.61
PF00353HemolysinCabind 0.61
PF01710HTH_Tnp_IS630 0.61
PF13602ADH_zinc_N_2 0.61
PF03050DDE_Tnp_IS66 0.61
PF01156IU_nuc_hydro 0.61
PF13464DUF4115 0.61
PF00872Transposase_mut 0.61
PF13664DUF4149 0.61
PF01612DNA_pol_A_exo1 0.61
PF01381HTH_3 0.61
PF13560HTH_31 0.61
PF13358DDE_3 0.61
PF14329DUF4386 0.61
PF13649Methyltransf_25 0.61
PF07311Dodecin 0.61
PF01544CorA 0.61
PF01545Cation_efflux 0.61
PF06772LtrA 0.61
PF07366SnoaL 0.61
PF09685DUF4870 0.61

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 165 Family Scaffolds
COG1357Uncharacterized conserved protein YjbI, contains pentapeptide repeatsFunction unknown [S] 8.48
COG0053Divalent metal cation (Fe/Co/Zn/Cd) efflux pumpInorganic ion transport and metabolism [P] 0.61
COG05962-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase foldCoenzyme transport and metabolism [H] 0.61
COG0598Mg2+ and Co2+ transporter CorAInorganic ion transport and metabolism [P] 0.61
COG1230Co/Zn/Cd efflux system componentInorganic ion transport and metabolism [P] 0.61
COG1957Inosine-uridine nucleoside N-ribohydrolaseNucleotide transport and metabolism [F] 0.61
COG3328Transposase (or an inactivated derivative)Mobilome: prophages, transposons [X] 0.61
COG3360Flavin-binding protein dodecinGeneral function prediction only [R] 0.61
COG3415CRISPR-associated protein Csa3, CARF domainDefense mechanisms [V] 0.61
COG3436TransposaseMobilome: prophages, transposons [X] 0.61
COG3965Predicted Co/Zn/Cd cation transporter, cation efflux familyInorganic ion transport and metabolism [P] 0.61
COG4292Low temperature requirement protein LtrA (function unknown)Function unknown [S] 0.61


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A58.79 %
All OrganismsrootAll Organisms41.21 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000750|JGI12272J11983_1094355Not Available510Open in IMG/M
3300000858|JGI10213J12805_10497665Not Available560Open in IMG/M
3300005506|Ga0068912_10016545Not Available619Open in IMG/M
3300005535|Ga0070684_102328037Not Available505Open in IMG/M
3300005562|Ga0058697_10042538All Organisms → cellular organisms → Bacteria1711Open in IMG/M
3300005562|Ga0058697_10080866Not Available1311Open in IMG/M
3300005562|Ga0058697_10671450Not Available548Open in IMG/M
3300006169|Ga0082029_1235190Not Available782Open in IMG/M
3300007004|Ga0079218_13355015Not Available542Open in IMG/M
3300007790|Ga0105679_10029297All Organisms → cellular organisms → Bacteria1126Open in IMG/M
3300007790|Ga0105679_10030077Not Available1147Open in IMG/M
3300007790|Ga0105679_10914123Not Available1039Open in IMG/M
3300009789|Ga0126307_10007677All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae7704Open in IMG/M
3300009789|Ga0126307_10030871All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae4119Open in IMG/M
3300009789|Ga0126307_10058800All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3014Open in IMG/M
3300009789|Ga0126307_10063241All Organisms → cellular organisms → Bacteria2903Open in IMG/M
3300009789|Ga0126307_10075480All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium2656Open in IMG/M
3300009789|Ga0126307_10079978Not Available2579Open in IMG/M
3300009789|Ga0126307_10105025All Organisms → Viruses → Predicted Viral2240Open in IMG/M
3300009789|Ga0126307_10250161Not Available1425Open in IMG/M
3300009789|Ga0126307_10347516All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium1194Open in IMG/M
3300009789|Ga0126307_10388559Not Available1125Open in IMG/M
3300009789|Ga0126307_10472355Not Available1012Open in IMG/M
3300009789|Ga0126307_10654620Not Available848Open in IMG/M
3300009789|Ga0126307_10667316Not Available839Open in IMG/M
3300009789|Ga0126307_10990349Not Available679Open in IMG/M
3300009789|Ga0126307_11103192Not Available642Open in IMG/M
3300009789|Ga0126307_11194830Not Available616Open in IMG/M
3300009840|Ga0126313_10026384All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3937Open in IMG/M
3300009840|Ga0126313_10131635All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1872Open in IMG/M
3300009840|Ga0126313_10155055Not Available1733Open in IMG/M
3300009840|Ga0126313_10292355Not Available1272Open in IMG/M
3300009840|Ga0126313_10470924Not Available1003Open in IMG/M
3300009840|Ga0126313_10581632Not Available901Open in IMG/M
3300009840|Ga0126313_10647091Not Available854Open in IMG/M
3300009840|Ga0126313_10860381All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium739Open in IMG/M
3300009840|Ga0126313_10878155Not Available731Open in IMG/M
3300009840|Ga0126313_10945467Not Available704Open in IMG/M
3300009840|Ga0126313_11056850Not Available666Open in IMG/M
3300009840|Ga0126313_11159519Not Available636Open in IMG/M
3300009840|Ga0126313_11884790All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium501Open in IMG/M
3300010036|Ga0126305_10007640All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium5299Open in IMG/M
3300010036|Ga0126305_10047926All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium2411Open in IMG/M
3300010036|Ga0126305_10050251Not Available2360Open in IMG/M
3300010036|Ga0126305_10064064All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium2124Open in IMG/M
3300010036|Ga0126305_10071078Not Available2029Open in IMG/M
3300010036|Ga0126305_10074555All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae1985Open in IMG/M
3300010036|Ga0126305_10128368All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1557Open in IMG/M
3300010036|Ga0126305_10174031All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium1352Open in IMG/M
3300010036|Ga0126305_10234093Not Available1176Open in IMG/M
3300010036|Ga0126305_10256885Not Available1125Open in IMG/M
3300010036|Ga0126305_10614424Not Available731Open in IMG/M
3300010036|Ga0126305_11172255Not Available530Open in IMG/M
3300010036|Ga0126305_11203293Not Available523Open in IMG/M
3300010037|Ga0126304_10116814All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1701Open in IMG/M
3300010037|Ga0126304_10482147Not Available832Open in IMG/M
3300010037|Ga0126304_10741817Not Available665Open in IMG/M
3300010037|Ga0126304_11188751Not Available523Open in IMG/M
3300010038|Ga0126315_10009033All Organisms → cellular organisms → Bacteria4641Open in IMG/M
3300010038|Ga0126315_10041814Not Available2446Open in IMG/M
3300010038|Ga0126315_10137469All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria1437Open in IMG/M
3300010039|Ga0126309_10020842All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae2861Open in IMG/M
3300010039|Ga0126309_10096804All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium1512Open in IMG/M
3300010039|Ga0126309_10100771All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium1486Open in IMG/M
3300010039|Ga0126309_10184194All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae1145Open in IMG/M
3300010039|Ga0126309_10196768All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1113Open in IMG/M
3300010039|Ga0126309_10273214All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium967Open in IMG/M
3300010039|Ga0126309_10274686All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium964Open in IMG/M
3300010039|Ga0126309_10355381Not Available864Open in IMG/M
3300010039|Ga0126309_10408049Not Available815Open in IMG/M
3300010039|Ga0126309_10451820Not Available780Open in IMG/M
3300010039|Ga0126309_10823342Not Available608Open in IMG/M
3300010039|Ga0126309_11187005Not Available523Open in IMG/M
3300010039|Ga0126309_11274429Not Available508Open in IMG/M
3300010040|Ga0126308_10000395All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria14101Open in IMG/M
3300010040|Ga0126308_10086019All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1901Open in IMG/M
3300010040|Ga0126308_10167326Not Available1398Open in IMG/M
3300010040|Ga0126308_10207680All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium1260Open in IMG/M
3300010040|Ga0126308_10232510All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium1193Open in IMG/M
3300010040|Ga0126308_11224295Not Available532Open in IMG/M
3300010041|Ga0126312_10018436All Organisms → cellular organisms → Bacteria4661Open in IMG/M
3300010041|Ga0126312_10067867All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter xylanophilus2402Open in IMG/M
3300010041|Ga0126312_10096654Not Available2016Open in IMG/M
3300010041|Ga0126312_10187187Not Available1445Open in IMG/M
3300010041|Ga0126312_10304495All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium1125Open in IMG/M
3300010041|Ga0126312_10638155Not Available767Open in IMG/M
3300010041|Ga0126312_10851369Not Available663Open in IMG/M
3300010041|Ga0126312_11011714Not Available608Open in IMG/M
3300010041|Ga0126312_11089299Not Available586Open in IMG/M
3300010041|Ga0126312_11258358Not Available546Open in IMG/M
3300010041|Ga0126312_11302860Not Available537Open in IMG/M
3300010042|Ga0126314_10005170All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria6912Open in IMG/M
3300010042|Ga0126314_10084768All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → Ktedonobacter racemifer2130Open in IMG/M
3300010042|Ga0126314_10268189Not Available1214Open in IMG/M
3300010042|Ga0126314_10274169Not Available1200Open in IMG/M
3300010042|Ga0126314_10357445Not Available1049Open in IMG/M
3300010042|Ga0126314_10393910Not Available997Open in IMG/M
3300010042|Ga0126314_10418373Not Available967Open in IMG/M
3300010042|Ga0126314_10448997Not Available932Open in IMG/M
3300010042|Ga0126314_10648235All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae772Open in IMG/M
3300010042|Ga0126314_10660759Not Available764Open in IMG/M
3300010042|Ga0126314_10814284All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium688Open in IMG/M
3300010042|Ga0126314_11158995All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium577Open in IMG/M
3300010042|Ga0126314_11254186Not Available555Open in IMG/M
3300010044|Ga0126310_10016424All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium3600Open in IMG/M
3300010044|Ga0126310_10029878Not Available2849Open in IMG/M
3300010044|Ga0126310_10040063All Organisms → cellular organisms → Bacteria → Terrabacteria group2534Open in IMG/M
3300010044|Ga0126310_10080467All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → unclassified Propionibacteriaceae → Propionibacteriaceae bacterium1916Open in IMG/M
3300010044|Ga0126310_10097764Not Available1771Open in IMG/M
3300010044|Ga0126310_10100275All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales1752Open in IMG/M
3300010044|Ga0126310_10136343Not Available1543Open in IMG/M
3300010044|Ga0126310_10462437Not Available919Open in IMG/M
3300010044|Ga0126310_10521063Not Available872Open in IMG/M
3300010044|Ga0126310_11526451All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium549Open in IMG/M
3300010044|Ga0126310_11683673Not Available526Open in IMG/M
3300010045|Ga0126311_10018341Not Available4101Open in IMG/M
3300010045|Ga0126311_10041841All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter xylanophilus2896Open in IMG/M
3300010045|Ga0126311_10090735All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter xylanophilus2075Open in IMG/M
3300010045|Ga0126311_10146022All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium1680Open in IMG/M
3300010045|Ga0126311_10273799Not Available1261Open in IMG/M
3300010045|Ga0126311_10317392Not Available1178Open in IMG/M
3300010045|Ga0126311_10481222Not Available968Open in IMG/M
3300010045|Ga0126311_10646503All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium841Open in IMG/M
3300010045|Ga0126311_10895863Not Available720Open in IMG/M
3300010166|Ga0126306_10078098All Organisms → Viruses → Predicted Viral2353Open in IMG/M
3300010166|Ga0126306_10082404All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium2293Open in IMG/M
3300010166|Ga0126306_10119658All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium1926Open in IMG/M
3300010166|Ga0126306_11088888Not Available654Open in IMG/M
3300010166|Ga0126306_11168157Not Available632Open in IMG/M
3300010395|Ga0058701_10745861Not Available536Open in IMG/M
3300012212|Ga0150985_102524152Not Available540Open in IMG/M
3300014487|Ga0182000_10017474Not Available1852Open in IMG/M
3300014488|Ga0182001_10019190All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Pollutimonas → Pollutimonas nitritireducens1580Open in IMG/M
3300018481|Ga0190271_12381479All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium633Open in IMG/M
3300018757|Ga0193612_1031766All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → environmental samples → uncultured Chloroflexia bacterium902Open in IMG/M
3300018891|Ga0193610_1025199All Organisms → cellular organisms → Bacteria → Terrabacteria group1657Open in IMG/M
3300018914|Ga0193594_1113848Not Available590Open in IMG/M
3300018920|Ga0190273_10287794All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium1090Open in IMG/M
3300018920|Ga0190273_11676204Not Available572Open in IMG/M
3300019132|Ga0193604_1011473Not Available1533Open in IMG/M
3300019377|Ga0190264_10331093All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium943Open in IMG/M
3300019377|Ga0190264_11052770All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium657Open in IMG/M
3300019767|Ga0190267_11153215Not Available563Open in IMG/M
3300019767|Ga0190267_11588593Not Available510Open in IMG/M
3300021184|Ga0196959_10029709All Organisms → Viruses → Predicted Viral1053Open in IMG/M
3300027075|Ga0214467_1016817All Organisms → cellular organisms → Bacteria775Open in IMG/M
3300027809|Ga0209574_10372062Not Available504Open in IMG/M
3300028705|Ga0307276_10010848All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae1619Open in IMG/M
3300028744|Ga0307318_10174871All Organisms → cellular organisms → Bacteria → Terrabacteria group740Open in IMG/M
3300028744|Ga0307318_10367370Not Available508Open in IMG/M
3300030496|Ga0268240_10125339Not Available618Open in IMG/M
3300030496|Ga0268240_10135667Not Available599Open in IMG/M
3300030499|Ga0268259_10074360Not Available727Open in IMG/M
3300030830|Ga0308205_1062522Not Available514Open in IMG/M
3300031091|Ga0308201_10198033Not Available662Open in IMG/M
3300031901|Ga0307406_11610936Not Available574Open in IMG/M
3300031995|Ga0307409_100350632Not Available1392Open in IMG/M
3300031995|Ga0307409_100541771All Organisms → Viruses → Predicted Viral1141Open in IMG/M
3300031995|Ga0307409_100976994All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium864Open in IMG/M
3300031995|Ga0307409_101213853All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium778Open in IMG/M
3300032004|Ga0307414_10752293Not Available886Open in IMG/M
3300032005|Ga0307411_12322638Not Available504Open in IMG/M
3300032126|Ga0307415_101376228Not Available671Open in IMG/M
3300032126|Ga0307415_102576325Not Available502Open in IMG/M
3300034687|Ga0334905_076016All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium522Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil70.91%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil7.27%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere5.45%
SoilEnvironmental → Terrestrial → Soil → Sand → Desert → Soil3.64%
AgaveHost-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave3.03%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.42%
SoilEnvironmental → Terrestrial → Soil → Sand → Desert → Soil2.42%
Termite NestEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest0.61%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.61%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil0.61%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Desert → Soil0.61%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil0.61%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.61%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.61%
AgaveHost-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified → Agave0.61%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000750Soil microbial communities from Moab, Utah, sample - Soil Crust Dry out, 3 days (biological replicate A) D5A (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300000858Soil microbial communities from Great Prairies - Wisconsin Native Prairie soilEnvironmentalOpen in IMG/M
3300005506Soil microbial communities from Colorado Plateau, USA - Soil Crust after dry out 3A (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005535Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaGEnvironmentalOpen in IMG/M
3300005562Agave microbial communities from Guanajuato, Mexico - As.Ma.eHost-AssociatedOpen in IMG/M
3300006169Termite nest microbial communities from Madurai, IndiaEnvironmentalOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300007790Microbial communities of desert soil contaminated with blood from dead anthrax infected zebra in Etosha National Park, Namibia. Combined Assembly of 14 sequencing projectsEnvironmentalOpen in IMG/M
3300009789Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28EnvironmentalOpen in IMG/M
3300009840Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105AEnvironmentalOpen in IMG/M
3300010036Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26EnvironmentalOpen in IMG/M
3300010037Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25EnvironmentalOpen in IMG/M
3300010038Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106EnvironmentalOpen in IMG/M
3300010039Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56EnvironmentalOpen in IMG/M
3300010040Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55EnvironmentalOpen in IMG/M
3300010041Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104AEnvironmentalOpen in IMG/M
3300010042Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105BEnvironmentalOpen in IMG/M
3300010044Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60EnvironmentalOpen in IMG/M
3300010045Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61EnvironmentalOpen in IMG/M
3300010166Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27EnvironmentalOpen in IMG/M
3300010395Agave microbial communities from Guanajuato, Mexico - Or.Ma.eHost-AssociatedOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300014487Bulk soil microbial communities from Mexico - Magueyal (Ma) metaGEnvironmentalOpen in IMG/M
3300014488Bulk soil microbial communities from Mexico - San Felipe (SF) metaGEnvironmentalOpen in IMG/M
3300018481Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 TEnvironmentalOpen in IMG/M
3300018757Soil crust microbial communities from Colorado Plateau, Utah, USA - mid-late stage, 42 hrs after wetting v1EnvironmentalOpen in IMG/M
3300018891Soil crust microbial communities from Colorado Plateau, Utah, USA - early stage, 18 hrs after wetting v1EnvironmentalOpen in IMG/M
3300018914Soil crust microbial communities from Colorado Plateau, Utah, USA - early stage, 42 hrs after wetting v1EnvironmentalOpen in IMG/M
3300018920Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 ISEnvironmentalOpen in IMG/M
3300019132Soil crust microbial communities from Colorado Plateau, Utah, USA - early-mid stage, 49.5 hrs after wetting v1EnvironmentalOpen in IMG/M
3300019377Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 TEnvironmentalOpen in IMG/M
3300019767Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 TEnvironmentalOpen in IMG/M
3300021184Soil microbial communities from Anza Borrego desert, Southern California, United States - S1+v_20EnvironmentalOpen in IMG/M
3300027075Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT160D0 HiSeqEnvironmentalOpen in IMG/M
3300027809Agave microbial communities from Guanajuato, Mexico - Mg.Ma.rz (SPAdes)Host-AssociatedOpen in IMG/M
3300028705Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115EnvironmentalOpen in IMG/M
3300028744Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367EnvironmentalOpen in IMG/M
3300030496Bulk soil microbial communities from Mexico - Penjamo (Pe) metaG (v2)EnvironmentalOpen in IMG/M
3300030499Agave microbial communities from Guanajuato, Mexico - As.Ma.rz (v2)Host-AssociatedOpen in IMG/M
3300030830Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_368 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031091Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031901Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2Host-AssociatedOpen in IMG/M
3300031995Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2Host-AssociatedOpen in IMG/M
3300032004Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3Host-AssociatedOpen in IMG/M
3300032005Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1Host-AssociatedOpen in IMG/M
3300032126Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2Host-AssociatedOpen in IMG/M
3300034687Soil microbial communities from Mojave Desert, California, United States - 1NOCEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12272J11983_109435523300000750SoilTSEITSSAHSGERVD*RRNRREGENLLPDDRQLLSDQQLRDASDEQLQDLIARVDLLLRSTGQPGLTLRQPEDERDTPGPADPPDPGTIGTE*
JGI10213J12805_1049766513300000858SoilVRTLLPEDQQLLSDQQLRDASDEQLQDLIARVDLLLRSKGQPGLRLQTPEDEPDTPEPTDPSDPLDDPGTIDTE*
Ga0068912_1001654513300005506SoilLLPDDRQLLSDQQLRDASDEQLQDLIARVDLLLRSTGQPGLTLRQPEDERDTPGPADPPDPGTIGTE*
Ga0070684_10232803713300005535Corn RhizosphereVRTLLPEDQQLLSDQQLRDASDEQLQDLIARVDLLLRSKEQPGLTLSSSEDERDTPEPTDPADPLDPGTIGTE*
Ga0058697_1004253813300005562AgaveRREGENALLPDDQQLLSDQQLRDASDEQLQDLIARVDLLLRSKGQPGLTLRPPEDEPDTPEPTDPADPGTIGTE*
Ga0058697_1008086623300005562AgaveVRTLLPDDQQLLSDQQLRDASDEQLQDLIARVDLLLRSKGQPGLTLHPPEDERDSPEAADPSDPGTIGTE*
Ga0058697_1067145013300005562AgaveLLPEDQQLLSDQQLRDASDEQLQDLIARLDLLMRSKGQPGLAPHPPEDERDTPEPTDPSDPGTIGTE
Ga0082029_123519013300006169Termite NestLVHRGFISAVIVVAIVQEKGNEGKVRTLLPEDQQLLSDQQLRDASDEQLQDLIARVDLLLRSKGQPGLTLHPPEDERDTPKPPDPSDPGTIGSE*
Ga0079218_1335501513300007004Agricultural SoilNQREGENALLPEDQQLLSDQQLRDASFEQLQDLNARLDLLLRSKGQPGLALHPPEDERDTPAPTDPSDPGTIGSE*
Ga0105679_1002929723300007790SoilLLPEDQQLLTDQQLRDASYEQLQDLIARIDLLLRSKGQPGLTLRPPEDERDAPEPSDPADPRAE*
Ga0105679_1003007713300007790SoilLLPEDQQLLSDQQLRDASEEQLQDLIARLDLLLRSKGQPGLTLHPPENGRDTPEPADPSDSGTIGSE*
Ga0105679_1091412323300007790SoilMLPDDQQLLTDQQLRDASDEQLQDLIARLDLLLRSKGQPGLTTRSPKDQRRHAPEPSDPADPSAG*
Ga0126307_1000767773300009789Serpentine SoilMPMLPDDQQLLTDKQLRDASDEQVQDLIARLDLLLRSKGQPGLTTRSPEEPRHIPETSDPADPGAG*
Ga0126307_1003087163300009789Serpentine SoilVRTLLPEDQQLLSDQQLRDASDEQLQDLIARIDLLLRSKGQAGLTLPLPEGGRDAPGPTDPLDPGTIGSE*
Ga0126307_1005880053300009789Serpentine SoilLLPDDQQLLSDQQLRDASDEQLQDLIARLDLLLRSRGQQGLALHPPEDGRGTPEPADPADPGTIGTE*
Ga0126307_1006324123300009789Serpentine SoilVRTLLPEDQQLLSDQQLRDASDEQLQDLIARVDLLLRSKGQPGLTLPPPEEERDTPEPTDASDPLDPGTVGSE*
Ga0126307_1007548023300009789Serpentine SoilVRTLLPEDQQLLSDQQLRDASDEQLQDLIARVDLLLRSKGQPGLTLHSSEDERDSPEPTDPSDPLDPGTIGTE*
Ga0126307_1007997813300009789Serpentine SoilLLPEDQQLLSDQQLRDASDDQLQDLIARVDLLLRSKGQSGLTLHSSEDERDTPEATDLSDPLDPGTIGTE*
Ga0126307_1010502513300009789Serpentine SoilLLPEDQQLLSDQQFRDASDEQLQDLIARLDLLLRSKGQPGLALHPPEGERDIPEPTDPSDPRGDPGTIGTE*
Ga0126307_1025016133300009789Serpentine SoilLLPDDQQLLSDQQLRDASEEQLQDLIARIDLLLRSKGQPGLTLHPPEDEGDTPEPADPSDPGTIGTE*
Ga0126307_1034751613300009789Serpentine SoilVLPEDQQLLSDQQLRDASDEQLQDLIARVDLLLRSKGQAGLTLHPPEDARDTPEPTDPAD
Ga0126307_1038855923300009789Serpentine SoilVRTLLPEDQQLLSDQQLRDASDEQLQDLIARLDLLMRSKGQPGLALHPPKDERNTPEPTDPSDPGSIGAE*
Ga0126307_1047235523300009789Serpentine SoilVITVLPDDQQLLSDEQLQDLIARLDLLLRSKGQPGLALHPPEDEFATPEPTDPSDPREDPGTIGAE*
Ga0126307_1065462023300009789Serpentine SoilVRTLLPDDQRLLSDQQLRDASEEQLQDLIARLDLLMRSKGQPGLAVHPPEDERGTPEPTDPSDPREDPGTIGSE*
Ga0126307_1066731623300009789Serpentine SoilDEGTEGKVRTLLPDDQQLLSDQQLRDTSEEQLQDLIARLDLLLRSKGQPGLALHPPEDERGTPEPTDPSDPRDPGTIGTE*
Ga0126307_1099034913300009789Serpentine SoilTLLPEDQRLLSDQQLRDASDEQLQDLIARLDLLLRSKGQPGLALHPPENGRGTPEPADPADPGTIGGE*
Ga0126307_1110319213300009789Serpentine SoilLLPDDQQLLSDQQLRDASDEQLQDLIARVELLLRSKGRPGLALHPPEDERVTPEPDDLSDPGTIGTE*
Ga0126307_1119483013300009789Serpentine SoilLLSDQQLRDASFEQLQDLIARLDLLLRSKGQPGLALHPPEDEDDTPEPADPADPGTIGGE
Ga0126313_1002638443300009840Serpentine SoilVRTLLPDDQQLLSDQQLRDASDEQLQDLIARVDLLLRSKGQPGLTLHTPEDERDTPGPYDPSDPGTIGTE*
Ga0126313_1013163513300009840Serpentine SoilVRTLLPEDQQLLSDQQLRDASEEQLQDLIARLDLLLRSKGQPGLALHPPEDERGTPEPTDPSDPRDPGTIGTE*
Ga0126313_1015505543300009840Serpentine SoilLLPDDQQLLSDQQLRVASDEQLQDLIARVDLLLRSKGQTGLTLHPPEDGRDAPESTDPSDPGTIGTE*
Ga0126313_1029235513300009840Serpentine SoilVRTLLPEDQQLLSDQQLRDASDEQLQDLIARVDLLLRSKGQPGLTLHPPEEERDTPEPTDASDPLDPGTVGSE*
Ga0126313_1047092413300009840Serpentine SoilTLLPEDQQLLSDQQLRDASDEQLQDLIARVDLLLRSKGQPGLTLSSSEDERDTPEPTDPADPLDPGTIGTE*
Ga0126313_1058163213300009840Serpentine SoilLLPDDQQLLSDQQLRDASDEQLQDLIARLDLLLRSRGQQGLALHPPEDGRGTPEPADPADPGAIGSE*
Ga0126313_1064709113300009840Serpentine SoilLLPDEQQLLSDQQLRDASEEQLQDLIARVDLLLRSKGQPGLTTRRPPEDQRDTLEPADPSDLGTIGSE*
Ga0126313_1086038133300009840Serpentine SoilVRTLLPDDQQLLSDQQLRDASDEQLQDLIARVDLLLRSKGQPGLALHPPEDERVTPEPDDLSDPGTIGTE*
Ga0126313_1087815523300009840Serpentine SoilLLPDDQQLLSDQQLRDASDEQLQDLIARLDLLLRSKGQPGLTLHPPEDEGETPKPADTSDPGTIGTE*
Ga0126313_1094546723300009840Serpentine SoilVRTLLPEDQQLLSDQQLRDASEEQLQDLIARVDLLLRSKGQPGLTLHSSEDERDSPEPTDPSDPLDPGTIGTE*
Ga0126313_1105685023300009840Serpentine SoilMGKLTKEPKGGRTLLPEDQQLLTDQQLRDASYEQLQDLIARLDLLLRSKGQPGLTLHRPEDPEPTDPADPGAG*
Ga0126313_1115951913300009840Serpentine SoilVRTLLPEDQQLLSDQQLRDASDEQLQDLIARLDLLMRSKGQPGLALHPPKDERNTPEPTDPSDPGTIGAE*
Ga0126313_1188479023300009840Serpentine SoilVRTLLPDDQQLLSDQQLRDASDEQLQDLIARLDLLLRSKGQPGLALHPPEDEDDTPEPADPADPG
Ga0126305_1000764043300010036Serpentine SoilVRTLLPEDQQLLSDQQLRDASDDQLQDLIARVDLLLRSKGQSGLTLHSSEDERDTPEPTDPSDPLDPGTIGTE*
Ga0126305_1004792623300010036Serpentine SoilVLPDDQQLLSDEQLQDLIARLDLLLRSKGQPGLALHPPEDEFATPEPTDPSDPREDPGTIGAE*
Ga0126305_1005025133300010036Serpentine SoilMLPDDQQLLTDKQLREASDEQLQDLIARLDLLLRSKGQPGLTTRSPKDQRRHGPEPSGPADPADPADPGVG*
Ga0126305_1006406413300010036Serpentine SoilLLPEDQQLLSDQQLRDASEEQLQDLIARVDLLLRSKGQAGITLHPPEDARDTPPEPTDPADPLEDPGTIGSE*
Ga0126305_1007107823300010036Serpentine SoilLLPDDQRLLSDQQLRDASEEQLQDLIARLDLLMRSKGQPGLAVHPPEDERGTPEPTDPSDPREDPGTIGSE*
Ga0126305_1007455523300010036Serpentine SoilLLPEDQQLLSDQQLRDASDEQLQDLIARVDLLLRSKGQPGLTLHPPEDERDTPKPPDPSDPGTIGSE*
Ga0126305_1012836813300010036Serpentine SoilDQQLLSDQQLRDASEEQLQDLIARLDLLLRSRGQQGLALHPPEDGRGTPEPADPADPGTIGSE*
Ga0126305_1017403123300010036Serpentine SoilVRTLLPEDQQLLSDQQLRDASEEQLQDLIARVDLLLRSKGQPGLTLHSPEDERDTPEPTDTSDPGTIGSE*
Ga0126305_1023409313300010036Serpentine SoilVRTLLPDDQQLLSDQQLRDASDEQLQDLIARVDLLLRSKGQPGLTLSSSEDERDTPEPTDPADPLDPGTIGTE*
Ga0126305_1025688523300010036Serpentine SoilVRTLLPEDQQLLSDQQLRDASDEQLQDLIARVDLLLRSKGQSGLTLHPPEEERDTPEPTDASDPLDPGTVGSE*
Ga0126305_1061442413300010036Serpentine SoilVRTLLPDDQQLLSDQQLRDASDEQLQDLIARLDLLLRSKGQPGLALHPPEDGRGTPEPADPSDPGTIGTE*
Ga0126305_1117225513300010036Serpentine SoilPDDQQLLSDQQLRDASDEQLQDLIARVELLLRSKGRPGLALHPPEDERVTPEPDDLSDPGTIGTE*
Ga0126305_1120329313300010036Serpentine SoilLLPEDQQLLSDQQLRDASEEQLQDLIARLDLLMRSKGQPGLALHPPKDERGTPGPSDPSDPLEDPG
Ga0126304_1011681443300010037Serpentine SoilVRTLLPDDQQLLSDQQLRDTSEEQLQDLIARLDLLLRSKGQPGLALHPPEDERGTPEPTDPSDPRDPGTIGTE*
Ga0126304_1048214713300010037Serpentine SoilEDQQLLSDQQLRDASEEQLQDLIARVDLLLRSKGQPGLTLHSPEDERDTPEPTDTSDPGTIGSE*
Ga0126304_1074181713300010037Serpentine SoilVRTLLPHNQQLLSDQQLRDASDEQLQDLIARLDLLLRSKGQPGLALEPPGDERATPEPTDPSDPREDPGTIGAE*
Ga0126304_1118875113300010037Serpentine SoilVRTLLPEDQQLLSDQQLRDASEEQLQDLIARVDLLLRSKGQPGLTLHPPEDGRDTPGPTDPSDPGTIGSE*
Ga0126315_1000903313300010038Serpentine SoilMLLPDDQQLLSDQQLRDASDEQLQDLIARLDLLLRSKGQPGLTLDPPEDERNTPEPTDPSEPLDPGTIGTE*
Ga0126315_1004181423300010038Serpentine SoilMLLPDDQQLLSDQPLRDASDEQLQDLIARIDLLLRSMGQPGLALHPPEDERDTPEPAGPSNPGTIGTE*
Ga0126315_1013746913300010038Serpentine SoilQQLLSDQQLRDASEEQLQDLIARLDLLMRSKGQPGLALHPPKDERGTPGPSDPSDPLEDPGTIGTE*
Ga0126309_1002084233300010039Serpentine SoilLLPDDQQLLSDQQLRDASDEQLQDLIARVDLLLRSKGQPGLALHPPEDERDTPEPDDLSDPGTIGTE*
Ga0126309_1009680423300010039Serpentine SoilLLPEDQQLLSDQQLRDASDEQLQDLIARVDLLLRSKGQPGLRLRPPEDARDIPEPTDPSDPLDDPGTIGTE*
Ga0126309_1010077123300010039Serpentine SoilLLDEDQQLLSDQQLRDASDEQLQDLIARLDLLLRSKGQPGLALPPPENGRGTPEPADPSDPGTIGTE*
Ga0126309_1018419443300010039Serpentine SoilVRTLLPDDQQLLSDQQLRDASDEQLQDLIARVDLLLRSKGQPGLTLHPPEDERDAPEPDDPSDPGTIGTE*
Ga0126309_1019676823300010039Serpentine SoilMGRLRKEGKVRTLLPDDQQLLSDQQLRDASDEQLQDLIARVDLLLRSKGQTGLTLHPPEDGRDAPESTDPSDPGT
Ga0126309_1027321423300010039Serpentine SoilVRTLLPEDQQLLSDQQLRDASDEQLQDLIARVDLLLRSKGQPGLTLHTPADERDTPEPYDRPDPGTIGTK*
Ga0126309_1027468623300010039Serpentine SoilLLPDEEQLLSDQQLRDASEEQLQDLIARVDLLLRSKGQPGLTTRRPPEDQRDTLEPADPSDLGTIGSE*
Ga0126309_1035538113300010039Serpentine SoilLLPEDQQLLSDQQLRDASDEQLQDLIARVDLLLRSKGQPGLTLHPPEEERDTPEPTDASDPLDPGTVGSE*
Ga0126309_1040804923300010039Serpentine SoilLLPDDQRLLSDQQLRDASDEQLQDLIARVDLLLRSKGQPGLMLHPPEDERDTPKPADPPDPGTIGSE*
Ga0126309_1045182013300010039Serpentine SoilMPMLPDDQQLLTDDQLRDASDDQLQDLIARLDLLLRSKGQPGLTTRSPKDQRRHAPEPSDPADPSAG*
Ga0126309_1082334213300010039Serpentine SoilMLPDDQQLLTDEQLRDASDQQLQDLIARLDLLLRTKGQPGLTTRSPEEPPHAPETSDPADPADPGAGG*
Ga0126309_1118700513300010039Serpentine SoilVRTLLPEDQQLLSDQQLRDASDEQLQDLIARVNLLLRSKGRPGLTLHSPEDERDTPEPTDPSNPLEDPGTIGTE*
Ga0126309_1127442913300010039Serpentine SoilDDQQLLSDQQLRDASEEQLQDLIARLDLLLRSRGQQGLALHPPEDGRGTPEPADPADPGTIGSE*
Ga0126308_1000039583300010040Serpentine SoilMPMLPDDQQLLTDKQLREASDEQLQGLIARLDLLLRSKGQPGLTTRSPEDQRRHGPEPSGPADPADPAGPGVG*
Ga0126308_1008601943300010040Serpentine SoilMGRLTKETEGKLRMLLPEDQQLLSDQQLKDASDEQLQDLIPRLDLLLRSKGQPGLALHPPEDERATPEPTDPSDPGTIGTE*
Ga0126308_1016732623300010040Serpentine SoilVRTLLPEDQQLLSDQQLRDASDEQLQDLIARLDLLMRSKGQPGLALHPPENGRGTPEPADPSDPGTIGSE*
Ga0126308_1020768023300010040Serpentine SoilLLPEDQQLLTDQQLRDASDEQLQDLIARVDLLLRSKGHPGLTLHRPEDERETPQPTDPSDPGAE*
Ga0126308_1023251023300010040Serpentine SoilMLLPDDQRLLSDKQLRDAPEEQLQDLIARLDLLLWSKGRPGLTLHAPEDERDTPEPTDPSDPGTIGTE*
Ga0126308_1122429513300010040Serpentine SoilLLADDQQLLSDQQLRDASDEQLQDLIARVDLLLRSKGQPGLALHPPEDGRDTPEPADPSDPGTIGTE*
Ga0126312_1001843643300010041Serpentine SoilLLPEDQQLLSDQQLRDASDEQLQDLIACLDLLMRSKGQPGLALHPPKDERDTPKPTDPSDPGTIGTE*
Ga0126312_1006786713300010041Serpentine SoilLLPEDQQLLTDQQLRDASHEQLQDLIARVDLLLRSKGQPGLTLHTPEDERGIPEPTDPAGPGAE*
Ga0126312_1009665433300010041Serpentine SoilLLPADQQLLSDHQLRDASEEQLQDLIARIDLLLRSKGQPGLTLHPPEDEGDTPEPADPSDPGTIGTE*
Ga0126312_1018718723300010041Serpentine SoilVRTLLPDDQQLLSDQQLRDATDEQLQDLIARVDLLLRSKGQPGLALHPPEDERDTPEPDDLSDPGTIGTE*
Ga0126312_1030449523300010041Serpentine SoilLLPDDQQLLSDQQLRDASDEQLQDLIARVDLLLRSKGQPGLALHPPEDERVTPEPDDLSDPGTIGTE*
Ga0126312_1063815513300010041Serpentine SoilVRTLLPDDQQLLSDQQLRDASDEQLQDLIARVDLLLRSQGQPGLTLSSSEDERDTPEPTDPADPLDPGTIGTE*
Ga0126312_1085136923300010041Serpentine SoilVRTLLPEDQQLLSDQQLRDASDEQLQDLIARVDLLLRSKGQPGLTLHPPEEERDTPEPTDASVPLDPGTVGSE*
Ga0126312_1101171413300010041Serpentine SoilGKVRTLLPDDQQLLSDQQLRDASDEQLQDLIARVDLLLRSKGQPGLTLSSSEDERDTPEPTDPADPLDPGTIGTE*
Ga0126312_1108929913300010041Serpentine SoilQQLRDASDEQLQDLIARLDLLLRSKGQPGLALHPPENGRGTPEPADPADPGAIGTE*
Ga0126312_1125835813300010041Serpentine SoilTLLPEDQQLLSDQQLRDASDEQLQDLIARLDLLMRSKGQPGLAVHPPEDERGTPEPTDPSDPGTIGTE*
Ga0126312_1130286013300010041Serpentine SoilLLPEDQQLLTDQRLRDASEEQLQDLIARVDLLLRSKGQPGLTLHRPEDERETPQPTDPSDPGAE*
Ga0126314_1000517013300010042Serpentine SoilLLPEDQQLLSDQQLRDASEEQLQDLIARLDLLMRSKGQPGLALHPPEDERDTPEPTDPSDPGTIGTE*
Ga0126314_1008476833300010042Serpentine SoilVRTLLPEDQQLLSDQQLRDASEEQLQDLIARVDLLLRSKGQPGLTLHSSEDERDTPEPTDPSDPLDQGTIGTE*
Ga0126314_1026818923300010042Serpentine SoilMLLPDDQQLLSDQQLRDASDEQLQDLIARIDLLLRSKGQPGLTLDPPEDERNTPEPTDPSEPL
Ga0126314_1027416913300010042Serpentine SoilRTLLPEDQQLLSDQQLRDASDEQLQDLIARVDLLLRSKGQPGLTLHSSEDERDSPEPTDPSDPLDPGTIGTE*
Ga0126314_1035744523300010042Serpentine SoilVRTLLPDDQQLLSDQQLRDASDEQLQDLIARVDLLLRSKGQPGLTLNSSEDERDTPEPTDPADPLDPGTIGTE*
Ga0126314_1039391013300010042Serpentine SoilLLPENEQLLSDQELRDASEEQLQDLIARLDLLMRSKGQRGLAVHPPDEDERGTPEPTDPSDPREDPGTIGAE*
Ga0126314_1041837313300010042Serpentine SoilLLPEDQQLLSDQQLRDASEEQLQDLIARVDLLLRSKGQPGLRLHPPEEERDPPEPTDASDPLDPGTIGSE*
Ga0126314_1044899713300010042Serpentine SoilLLPDDQQLLSDKQLRDASEEQLQDLIVRLDLLLRSKGQPGLALHPPEDERDTPEPADPSDPGTIGSE*
Ga0126314_1064823523300010042Serpentine SoilLLPEDQQLLTDQRLRDASEEQLQDLIARVDLLLRSKGQPGLTLRCPEDEHETPEPMDPADPGAE*
Ga0126314_1066075923300010042Serpentine SoilLLPEDQQLLSDQQLRGASDEQLQDLIARVDLLLRSKGQPGLTLHSSEDERDTLEATDPSHPLDPGTIGTE*
Ga0126314_1081428423300010042Serpentine SoilDQQLRDASEEQLQDLIARLDLLLRSKGQPGLALHPPEDGRGTPEPADPSDPGTIGTE*
Ga0126314_1115899523300010042Serpentine SoilLLPDDQQLLSDQQLRDASFEQLQDLIARLDLLLRSRGQQGLALHPPEDGRGTPEPADPADPGTIGSE*
Ga0126314_1125418613300010042Serpentine SoilTEGKVRTVLPEDQQLLSDQQLRDASDEQLQDLIARVDLLLRSKGQPGLTLHTPEDERDTPGPTDPADPLEDPGTIGSE*
Ga0126310_1001642463300010044Serpentine SoilMLPDDQQLLTDKQLSDASDEQLQDLIARLDLLLRSKGQPGLTTRSPKDQRRHAPEPSDPADPSAG*
Ga0126310_1002987813300010044Serpentine SoilLLPEDQQLLSDQQLRDASDEQLQDLIARLDLLMRSKGQPGLALHPPEDERDTPEPTDPSD
Ga0126310_1004006343300010044Serpentine SoilLLPEDQQLLTDQQLRDASEEQLQNLIARVDLLLRSKGQPGLTLHRPEDPEPTDPADPGAE
Ga0126310_1008046733300010044Serpentine SoilMLLPEDQQLLSDQQLRDASDEQLQDLIARVDLLLRSKGQAGLTLHPPEDARDTPEPTDPADPLEDPGTIGSE*
Ga0126310_1009776423300010044Serpentine SoilMLPDDQQLLTEKQLREASDEQLQDLIARLDLLLRSKGQPGLTTRSPEDQRRHGPEPSDPADPGVG*
Ga0126310_1010027523300010044Serpentine SoilVRTLLPDDQQLLSDQQLRDASEEQLQDLIARVDLLLRSKGQPGLTLYPPEDERDTPGPTDPSDPGTIGTE*
Ga0126310_1013634313300010044Serpentine SoilLLPDDEQLLSEQQLRDASEEQLQDLIARLDLLLRSKGQPGLALRPPEDERDTPEPADPSDPGTIGSE*
Ga0126310_1046243713300010044Serpentine SoilLLPEDQQLLSDKQLRDASEEQLQDLIARLDLLLRSKGRPGLALRPPEDERDTPEPADPSDPGTIGTE*
Ga0126310_1052106323300010044Serpentine SoilLLPEDQQLLTDQQLRDASYEQLQDLIARLDLLLQSKGQPGLTLHRPEDPEPTDPADPGAG
Ga0126310_1152645113300010044Serpentine SoilMGKLTKEPKGGRTLLPEDQQLLTDQQLRDASDEQLQDLIARVDLLLRSKGQPGLTRRPPEDERDTPEPTDPADPGAE*
Ga0126310_1168367313300010044Serpentine SoilQQLLSDQQLRDASDEQLQDLIARVDLLLRSKGQPGLTLRPPEDEPDTPEPTDPSDPGTIGTE*
Ga0126311_1001834133300010045Serpentine SoilMLPDDQQLLTDKQLREASDEQLQGLIARLDLLLRSKGQPGLTTRSPEDQRRHGPEPSDPADPGVG*
Ga0126311_1004184113300010045Serpentine SoilLLPEDQQLLTDQQLRDASYEQLQDLIARLDLLLRSKGQPGLTLHRPEDPEPTDPADPGAG
Ga0126311_1009073543300010045Serpentine SoilLLPEDQQLLTDQQLRDASHEQLQDLIACVDLLLRSKGQPGLTLHTPEDERGIPEPTDPAGPGAE*
Ga0126311_1014602223300010045Serpentine SoilLLPDDQQLLSDKQLRDASEEQLQDLIARLDLLLRSKGQPGLALRPPEDERDTPEPADPSDPGTIGSE*
Ga0126311_1027379923300010045Serpentine SoilLLPEDQQLLSDQQLRDASDEQLQDLIARVDLLLRSKGQAGLTLHPPEDARDTPEPTDPADPLEDPGTIGSE*
Ga0126311_1031739233300010045Serpentine SoilVRTLLPDDQQLLSDQQLRDASDEQLQDLIARVDLLLRSKGQPGLTLSSSEDERDTPEPTDPAD
Ga0126311_1048122223300010045Serpentine SoilSDQQLRDASDEQLQDLIARVDLLLRSKGQPGLTLNSSEDERDTPEPTDPADPLDPGTIGTE*
Ga0126311_1064650313300010045Serpentine SoilLLPEDQQLLTDQQLRDASDEQLQDLIARVDLLLRSKGHPGLTLHRPEDERYTPQPTDPSDPGAE*
Ga0126311_1089586323300010045Serpentine SoilVRTLLPEDQQLLSDKQLRDASEEQLQDLIARLDLLLRSKGRPGLALRPPEDERDTPEPADPSDPGTIGTE*
Ga0126306_1007809813300010166Serpentine SoilLLPEDQRLLSDQQLRDASDEQLQDLIARLDLLLRSKGQPGLALHPPENGRGTPEP
Ga0126306_1008240443300010166Serpentine SoilVRTLLPEDQQLLSDQQHRDASDEQLQDLIARVDLLLRSKGQPGLTLHSSEDERDSPEPTDPSDPLDPGTIGTE*
Ga0126306_1011965813300010166Serpentine SoilLLPDDQQLLSDQQLRDASDEQLQDLIARLDLLLRSKGQPGLALHPPENGRGTPEP
Ga0126306_1108888813300010166Serpentine SoilVRTLLPEDQQLLSDQQLRDASDEQLQDLIARVDLLLRSKGQPGLTLSSSEDERDTPEPTDPADPLDPGTIGTE*
Ga0126306_1116815713300010166Serpentine SoilVRTLLPEDQQLLSDQQLRDASEEQLQDLIARLDLLLRSKGQPGLALHPREDERGTPEPTDPSDPRDPGTIGTE*
Ga0058701_1074586113300010395AgaveQLLSDQQLRDASDEQLQDLIARVDLLLRSKGQPGLTLRPPEDEPDTPEPTDPADPGIIGTE*
Ga0150985_10252415223300012212Avena Fatua RhizosphereVRTLLPDDQQLLSDKQLRDASEEQLQDLIARLDLLLRSKGQPGLRLDLPEDEPDIPEPTDPSDPRGDPGTIGSE*
Ga0182000_1001747423300014487SoilLLPDDQQLLSDQQLRDASDEQLQDLIARVDLLLRSKGQLGLTLRPPEDEPDTPEPTDPADPGTIGTE*
Ga0182001_1001919023300014488SoilVRTLLPEDQQLLSDQQLRDASDEQLQDLIARVDLLLRSKGQPGLTLHAPEDERDTPDPADPSDPGTIGSE*
Ga0190271_1238147923300018481SoilQQLLSDQQLRDASDEQLQDLIARVDLLLRSKGQPGLRLQTPEDEPDIPEPTDPSDPLDDPGTIDTE
Ga0193612_103176613300018757SoilRNRREGENLLPDDRQLLSDQQLRDASDEQLQDLIARVDLLLRSTGQPGLTLRQPEDERDTPGPADPPDPGTIGTE
Ga0193610_102519923300018891SoilLLPDDRQLLSDQQLRDASDEQLQDLIARVDLLLRSTGQPGLTLRQPEDERDTPGPADPPDPGTIGTE
Ga0193594_111384813300018914SoilNLLPDDRQLLSDQQLRDASDEQLQDLIARVDLLLRSTGQPGLTLRQPEDERDTPGPADPPDPGTIGTE
Ga0190273_1028779413300018920SoilVRTLLPEDQQLLSDQQLRDASDEQLQDLIARVDLLLRSKGQPGLRLRPPEDAPDIPEPTDPSDPLDDPGTIGTE
Ga0190273_1167620413300018920SoilLLPEDQQLLTDQQLRDASYEQLQDLIARVDLLLRSKGQPGLTLHPPEDPEPTDPADPGAE
Ga0193604_101147323300019132SoilLLPDDQQLLSDQQLRDASDEQLQDLIARVDLLLRSTGQPGLTLRQPEDERDTPGPADPPDPGTIGTE
Ga0190264_1033109333300019377SoilVRTLLPDDQQLLSDQQLRDASEEQLQDLIARLDLLLRSKGQPGLTLHAPKDERDTPEPADPADPGTIGSE
Ga0190264_1105277013300019377SoilVRTLLPEDQQLLSDQQLRDASDEQLQDLIARVDLLLRSKGQPGLRLQTPEDARDLPEPPN
Ga0190267_1115321513300019767SoilVRRLLPEDQQLLSDQQLRDASEEQLQDLIARVDLLLRSKGQPGLRLHPPEEERHTPEPTDASDPLDPGTIGSE
Ga0190267_1158859323300019767SoilVRTLLPEDQQLLSDKQLRDASEEQLQDLIARLDLLLRSKGQPGLALRPPEDERDTPEPTDPSDPREDPGTIGTE
Ga0196959_1002970913300021184SoilGENALLPEDQQLLSDQQLRDASFEQLQDLIARLDLLLRSKGQPGLTLHPPEDGRDTPEPADPADPGTTGTG
Ga0214467_101681713300027075SoilVRTLLPEDQQLLSDQQLRDASDEQLQDLIARVDLLLRSKGQPGLRLQTPEDEPDIPEPTD
Ga0209574_1037206213300027809AgaveVRTLLPEDQQLLSDQQLRDASFEQLQDLIARLDLLLRSKGQPGLALHQPKDERDTPEPADPADPGTIGSE
Ga0307276_1001084833300028705SoilLLTDQRLRDASEEQLQDLIARVGLLLRSKGQPGLMLRRPEDEHETPEPMDPADPGAE
Ga0307318_1017487113300028744SoilVRTLLPDDQQLLSDQQLRDASDEQLQDLIARLDLLLRSKGQPGLTLHPPEDERDTPEPTDTSDPRDPGTIGTE
Ga0307318_1036737023300028744SoilLLPEDQQLLTDQQLRDASDKQLQDLIARVDLLLRSKGQPGLTLRPPEDERETPEPTDPSDPGAE
Ga0268240_1012533913300030496SoilSDQQLRDASEEQLQDLIARLYLLMRSKGQPGLALHPPKDERGTPEPADPSDPREDPGTIGSE
Ga0268240_1013566713300030496SoilTLLPEDQQLLSDQQLRDASDEQLQDLIARLDLLLRSKGQPGLTLHPPEDERDSPDPAEPSDPGTIGSE
Ga0268259_1007436013300030499AgaveQLRDASDEQLQDLIARVDLLLRSKGQPGLTLRPPEDEPDTPEPTDPADPGTIGTE
Ga0308205_106252223300030830SoilLLPDDQQLLSDKQLRDASDEQLQDLIARLDLLLRSKGQPGLALHPPEDERNTPEPADPSDPGTIGSE
Ga0308201_1019803313300031091SoilLLPDDQQLLSDQQLRDASDEQLQDLIARVDLLLRSKGQPGLTLSSSEDERDTPEPTDPADPLDPGTIGTE
Ga0307406_1161093613300031901RhizosphereLLPDDQQLLSDQQLRDASDEQLQDLIARVDLLLRSKGQPGLTLRPPEDEPDTPEPTDPSDPGTIGTE
Ga0307409_10035063213300031995RhizosphereLLPDDQQLLSDQQLRDASDEQLQDLIARVDLLLRSKGQPGLTLRPPEDEPDTPEPTDPADPGTIGTE
Ga0307409_10054177133300031995RhizosphereLLPEDQQLLSNQQLRDASDEQLQDLIARLDLLLRSKGQPGLALHPPENGRGTPEPADPADPGAIGTE
Ga0307409_10097699413300031995RhizosphereVRTLLPEDQQLLSDQQLRDASEEQLQDLIARLDLLLRSKGQPGLALHPPEDERGTPEPTDPSDPRDPGTIGTE
Ga0307409_10121385313300031995RhizosphereLLPDDQQLLSDQQLRDASFEQLQDLIARLDLLLRSRGQQGLALHPPEDGRGTPEPTDPADPGTIGSE
Ga0307414_1075229323300032004RhizosphereVRTLLPENEQLLSDQELRDASEGQLQDLIARLDLLMRSKGQRGLAVHPPDEDERGTPEPTDPSDPREDPGTIGAE
Ga0307411_1232263813300032005RhizosphereVRTLLPEDQQLLSDQQLRDASEEQLQDLIARLDLLLRSKGQPGLALHPPENGRGTPEPADPADPGAIGTE
Ga0307415_10137622813300032126RhizosphereVRTLLPEDQQLLSNQQLRDASDEQLQDLIARLDLLLRSKGQPGLALHPPENGRGTPEPADPADPGAIGTE
Ga0307415_10257632513300032126RhizosphereVRTLCYPQRSAAPLSDQQLRHASEEQLQDLIARIDLLLRSKGQPGLTLHPPEDERDTPEPADPADPGT
Ga0334905_076016_308_5203300034687SoilVRTLLPDDQQLLSDQQLRDASDEQLQDLIARLDLLLRSKGQPGLALHPPEGERDTPEPTDPADPGTIGSE


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.