NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F039205

Metagenome Family F039205

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F039205
Family Type Metagenome
Number of Sequences 164
Average Sequence Length 53 residues
Representative Sequence MPVWQVALVLNLTFAVGLGLGYAGWGRRAEALDREFDAARAQVERLERER
Number of Associated Samples 134
Number of Associated Scaffolds 164

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 98.78 %
% of genes near scaffold ends (potentially truncated) 98.78 %
% of genes from short scaffolds (< 2000 bps) 87.20 %
Associated GOLD sequencing projects 125
AlphaFold2 3D model prediction Yes
3D model pTM-score0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (98.171 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(20.732 % of family members)
Environment Ontology (ENVO) Unclassified
(30.488 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(51.829 % of family members)



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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: Yes Secondary Structure distribution: α-helix: 60.26%    β-sheet: 0.00%    Coil/Unstructured: 39.74%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.41
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 164 Family Scaffolds
PF00578AhpC-TSA 38.41
PF13442Cytochrome_CBB3 31.71
PF04234CopC 4.27
PF07676PD40 1.22
PF01568Molydop_binding 0.61
PF11604CusF_Ec 0.61
PF07519Tannase 0.61
PF02738MoCoBD_1 0.61

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 164 Family Scaffolds
COG2372Copper-binding protein CopC (methionine-rich)Inorganic ion transport and metabolism [P] 4.27


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms98.17 %
UnclassifiedrootN/A1.83 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000364|INPhiseqgaiiFebDRAFT_105802117All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria2459Open in IMG/M
3300000955|JGI1027J12803_102022627All Organisms → cellular organisms → Bacteria → Proteobacteria1310Open in IMG/M
3300000956|JGI10216J12902_111042908All Organisms → cellular organisms → Bacteria1020Open in IMG/M
3300001431|F14TB_101265339All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium587Open in IMG/M
3300002558|JGI25385J37094_10179878All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium566Open in IMG/M
3300002560|JGI25383J37093_10019868All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium2249Open in IMG/M
3300002562|JGI25382J37095_10026044All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria2287Open in IMG/M
3300002562|JGI25382J37095_10187210All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium633Open in IMG/M
3300004156|Ga0062589_102578160All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium527Open in IMG/M
3300004268|Ga0066398_10075071All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aminobacter → unclassified Aminobacter → Aminobacter sp. J15739Open in IMG/M
3300005171|Ga0066677_10300323All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aminobacter → unclassified Aminobacter → Aminobacter sp. J15917Open in IMG/M
3300005172|Ga0066683_10064586All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aminobacter → unclassified Aminobacter → Aminobacter sp. J152180Open in IMG/M
3300005172|Ga0066683_10517468All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aminobacter → unclassified Aminobacter → Aminobacter sp. J15728Open in IMG/M
3300005174|Ga0066680_10180147All Organisms → cellular organisms → Bacteria → Proteobacteria1331Open in IMG/M
3300005175|Ga0066673_10620736All Organisms → cellular organisms → Bacteria628Open in IMG/M
3300005177|Ga0066690_10868682All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aminobacter → unclassified Aminobacter → Aminobacter sp. J15579Open in IMG/M
3300005177|Ga0066690_10965321All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aminobacter → unclassified Aminobacter → Aminobacter sp. J15539Open in IMG/M
3300005332|Ga0066388_101174253All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1309Open in IMG/M
3300005441|Ga0070700_102004903All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aminobacter → unclassified Aminobacter → Aminobacter sp. J15502Open in IMG/M
3300005444|Ga0070694_100492713All Organisms → cellular organisms → Bacteria974Open in IMG/M
3300005445|Ga0070708_100020600All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aminobacter → unclassified Aminobacter → Aminobacter sp. J155564Open in IMG/M
3300005445|Ga0070708_100534061All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1106Open in IMG/M
3300005468|Ga0070707_101859175All Organisms → cellular organisms → Bacteria569Open in IMG/M
3300005536|Ga0070697_101372985All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aminobacter → unclassified Aminobacter → Aminobacter sp. J15631Open in IMG/M
3300005545|Ga0070695_100593668All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aminobacter → unclassified Aminobacter → Aminobacter sp. J15868Open in IMG/M
3300005552|Ga0066701_10284016All Organisms → cellular organisms → Bacteria1026Open in IMG/M
3300005552|Ga0066701_10401274All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aminobacter → unclassified Aminobacter → Aminobacter sp. J15849Open in IMG/M
3300005553|Ga0066695_10375335All Organisms → cellular organisms → Bacteria887Open in IMG/M
3300005555|Ga0066692_10393337All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aminobacter → unclassified Aminobacter → Aminobacter sp. J15879Open in IMG/M
3300005556|Ga0066707_10049246All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aminobacter → unclassified Aminobacter → Aminobacter sp.2436Open in IMG/M
3300005556|Ga0066707_10305457All Organisms → cellular organisms → Bacteria → Proteobacteria1041Open in IMG/M
3300005558|Ga0066698_10212948All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aminobacter → unclassified Aminobacter → Aminobacter sp. J151324Open in IMG/M
3300005559|Ga0066700_10346081All Organisms → cellular organisms → Bacteria → Proteobacteria1050Open in IMG/M
3300005561|Ga0066699_10852606All Organisms → cellular organisms → Bacteria638Open in IMG/M
3300005575|Ga0066702_10123587All Organisms → cellular organisms → Bacteria1506Open in IMG/M
3300005587|Ga0066654_10222162All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aminobacter → unclassified Aminobacter → Aminobacter sp. J15988Open in IMG/M
3300005713|Ga0066905_100758386All Organisms → cellular organisms → Bacteria → Proteobacteria838Open in IMG/M
3300005713|Ga0066905_100781356All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aminobacter → unclassified Aminobacter → Aminobacter sp. J15827Open in IMG/M
3300005764|Ga0066903_106539116All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aminobacter → unclassified Aminobacter → Aminobacter sp. J15607Open in IMG/M
3300006032|Ga0066696_11122915All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aminobacter → unclassified Aminobacter → Aminobacter sp. J15500Open in IMG/M
3300006194|Ga0075427_10078994All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aminobacter → unclassified Aminobacter → Aminobacter sp. J15593Open in IMG/M
3300006796|Ga0066665_10324193All Organisms → cellular organisms → Bacteria1247Open in IMG/M
3300006796|Ga0066665_10443405All Organisms → cellular organisms → Bacteria → Proteobacteria1072Open in IMG/M
3300006800|Ga0066660_11013941All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium665Open in IMG/M
3300006844|Ga0075428_101312796All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aminobacter → unclassified Aminobacter → Aminobacter sp. J15761Open in IMG/M
3300006846|Ga0075430_100056142All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aminobacter → unclassified Aminobacter → Aminobacter sp. J153311Open in IMG/M
3300006847|Ga0075431_102148927All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aminobacter → unclassified Aminobacter → Aminobacter sp. J15513Open in IMG/M
3300006847|Ga0075431_102185626All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aminobacter → unclassified Aminobacter → Aminobacter sp. J15508Open in IMG/M
3300006852|Ga0075433_10804691All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aminobacter → unclassified Aminobacter → Aminobacter sp. J15821Open in IMG/M
3300006854|Ga0075425_100287329All Organisms → cellular organisms → Bacteria1893Open in IMG/M
3300006854|Ga0075425_101786402All Organisms → cellular organisms → Bacteria690Open in IMG/M
3300006880|Ga0075429_100411158All Organisms → cellular organisms → Bacteria1185Open in IMG/M
3300006880|Ga0075429_101977493All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aminobacter → unclassified Aminobacter → Aminobacter sp. J15505Open in IMG/M
3300006914|Ga0075436_100467184All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aminobacter → unclassified Aminobacter → Aminobacter sp. J15920Open in IMG/M
3300007004|Ga0079218_10813508All Organisms → cellular organisms → Bacteria900Open in IMG/M
3300007076|Ga0075435_100363012All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aminobacter → unclassified Aminobacter → Aminobacter sp. J151242Open in IMG/M
3300007076|Ga0075435_101385110All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aminobacter → unclassified Aminobacter → Aminobacter sp. J15616Open in IMG/M
3300007255|Ga0099791_10261137All Organisms → cellular organisms → Bacteria822Open in IMG/M
3300007265|Ga0099794_10778453All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium512Open in IMG/M
3300009012|Ga0066710_100087400All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales4102Open in IMG/M
3300009012|Ga0066710_100153680All Organisms → cellular organisms → Bacteria3204Open in IMG/M
3300009012|Ga0066710_100221027All Organisms → cellular organisms → Bacteria2717Open in IMG/M
3300009038|Ga0099829_10872492All Organisms → cellular organisms → Bacteria747Open in IMG/M
3300009038|Ga0099829_11250001All Organisms → cellular organisms → Bacteria614Open in IMG/M
3300009088|Ga0099830_10805817All Organisms → cellular organisms → Bacteria775Open in IMG/M
3300009088|Ga0099830_11569460All Organisms → cellular organisms → Bacteria548Open in IMG/M
3300009090|Ga0099827_10373623All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1215Open in IMG/M
3300009137|Ga0066709_100333822All Organisms → cellular organisms → Bacteria2075Open in IMG/M
3300009137|Ga0066709_104143089All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium528Open in IMG/M
3300009137|Ga0066709_104147335All Organisms → cellular organisms → Bacteria527Open in IMG/M
3300009147|Ga0114129_11363031Not Available877Open in IMG/M
3300009162|Ga0075423_12380306All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium577Open in IMG/M
3300009792|Ga0126374_11118196All Organisms → cellular organisms → Bacteria626Open in IMG/M
3300009803|Ga0105065_1017918All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium812Open in IMG/M
3300009810|Ga0105088_1111160All Organisms → cellular organisms → Bacteria515Open in IMG/M
3300010046|Ga0126384_10649222All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium929Open in IMG/M
3300010047|Ga0126382_10660990All Organisms → cellular organisms → Bacteria870Open in IMG/M
3300010048|Ga0126373_12369820All Organisms → cellular organisms → Bacteria → Proteobacteria591Open in IMG/M
3300010303|Ga0134082_10027372All Organisms → cellular organisms → Bacteria2129Open in IMG/M
3300010335|Ga0134063_10076393All Organisms → cellular organisms → Bacteria1496Open in IMG/M
3300010335|Ga0134063_10426141Not Available654Open in IMG/M
3300010336|Ga0134071_10156841All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1109Open in IMG/M
3300010360|Ga0126372_11564501All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium697Open in IMG/M
3300010362|Ga0126377_11949542All Organisms → cellular organisms → Bacteria663Open in IMG/M
3300010376|Ga0126381_100511944All Organisms → cellular organisms → Bacteria1695Open in IMG/M
3300010376|Ga0126381_104430293All Organisms → cellular organisms → Bacteria543Open in IMG/M
3300010398|Ga0126383_12544786All Organisms → cellular organisms → Bacteria596Open in IMG/M
3300011119|Ga0105246_11274174All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria680Open in IMG/M
3300012096|Ga0137389_10861370All Organisms → cellular organisms → Bacteria → Proteobacteria778Open in IMG/M
3300012202|Ga0137363_11097283All Organisms → cellular organisms → Bacteria → Proteobacteria676Open in IMG/M
3300012205|Ga0137362_10628491All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium925Open in IMG/M
3300012205|Ga0137362_10929551All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium742Open in IMG/M
3300012206|Ga0137380_11389190All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium587Open in IMG/M
3300012210|Ga0137378_11864160Not Available504Open in IMG/M
3300012355|Ga0137369_10787252All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium649Open in IMG/M
3300012356|Ga0137371_10195518All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1584Open in IMG/M
3300012359|Ga0137385_10031975All Organisms → cellular organisms → Bacteria4718Open in IMG/M
3300012359|Ga0137385_10393764All Organisms → cellular organisms → Bacteria → Proteobacteria1182Open in IMG/M
3300012362|Ga0137361_10736121All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium899Open in IMG/M
3300012363|Ga0137390_11976421All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium509Open in IMG/M
3300012685|Ga0137397_10747439All Organisms → cellular organisms → Bacteria726Open in IMG/M
3300012917|Ga0137395_10554261All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium829Open in IMG/M
3300012925|Ga0137419_11221988All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium630Open in IMG/M
3300012927|Ga0137416_10051936All Organisms → cellular organisms → Bacteria → Proteobacteria2881Open in IMG/M
3300012930|Ga0137407_10008026All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales7317Open in IMG/M
3300012948|Ga0126375_11752672All Organisms → cellular organisms → Bacteria540Open in IMG/M
3300012958|Ga0164299_11538099All Organisms → cellular organisms → Bacteria521Open in IMG/M
3300012971|Ga0126369_10184717All Organisms → cellular organisms → Bacteria1996Open in IMG/M
3300012971|Ga0126369_11461403All Organisms → cellular organisms → Bacteria773Open in IMG/M
3300013308|Ga0157375_12301995All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium642Open in IMG/M
3300014326|Ga0157380_11459849All Organisms → cellular organisms → Bacteria736Open in IMG/M
3300015053|Ga0137405_1040180All Organisms → cellular organisms → Bacteria3175Open in IMG/M
3300015054|Ga0137420_1018858All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium608Open in IMG/M
3300015245|Ga0137409_11369164All Organisms → cellular organisms → Bacteria552Open in IMG/M
3300015373|Ga0132257_101533658All Organisms → cellular organisms → Bacteria851Open in IMG/M
3300015374|Ga0132255_102449270All Organisms → cellular organisms → Bacteria797Open in IMG/M
3300015374|Ga0132255_104078809All Organisms → cellular organisms → Bacteria620Open in IMG/M
3300017974|Ga0187777_10497847All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium851Open in IMG/M
3300018431|Ga0066655_10727313All Organisms → cellular organisms → Bacteria673Open in IMG/M
3300018468|Ga0066662_10742440All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium944Open in IMG/M
3300020215|Ga0196963_10189786All Organisms → cellular organisms → Bacteria887Open in IMG/M
3300021344|Ga0193719_10440150All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium532Open in IMG/M
3300021476|Ga0187846_10401665All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium563Open in IMG/M
3300021478|Ga0210402_11087571All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium727Open in IMG/M
3300021560|Ga0126371_10058561All Organisms → cellular organisms → Bacteria3707Open in IMG/M
3300025898|Ga0207692_10723239All Organisms → cellular organisms → Bacteria647Open in IMG/M
3300025940|Ga0207691_11235000All Organisms → cellular organisms → Bacteria619Open in IMG/M
3300026296|Ga0209235_1051358All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1980Open in IMG/M
3300026304|Ga0209240_1240565All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium552Open in IMG/M
3300026309|Ga0209055_1046316All Organisms → cellular organisms → Bacteria1898Open in IMG/M
3300026325|Ga0209152_10073273All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1245Open in IMG/M
3300026329|Ga0209375_1033409All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria2747Open in IMG/M
3300026330|Ga0209473_1046579All Organisms → cellular organisms → Bacteria1905Open in IMG/M
3300026331|Ga0209267_1187395All Organisms → cellular organisms → Bacteria → Proteobacteria808Open in IMG/M
3300026334|Ga0209377_1143664All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium916Open in IMG/M
3300026343|Ga0209159_1188927All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aminobacter → unclassified Aminobacter → Aminobacter sp. J15694Open in IMG/M
3300026343|Ga0209159_1208642All Organisms → cellular organisms → Bacteria616Open in IMG/M
3300026358|Ga0257166_1060220All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium547Open in IMG/M
3300026507|Ga0257165_1050280All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium749Open in IMG/M
3300026528|Ga0209378_1033557All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria2671Open in IMG/M
3300026542|Ga0209805_1065800All Organisms → cellular organisms → Bacteria1774Open in IMG/M
3300026551|Ga0209648_10041952All Organisms → cellular organisms → Bacteria3953Open in IMG/M
3300026552|Ga0209577_10605839All Organisms → cellular organisms → Bacteria654Open in IMG/M
3300027273|Ga0209886_1064871All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium580Open in IMG/M
3300027273|Ga0209886_1073733All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium546Open in IMG/M
3300027874|Ga0209465_10612458All Organisms → cellular organisms → Bacteria539Open in IMG/M
3300027875|Ga0209283_10117446All Organisms → cellular organisms → Bacteria1750Open in IMG/M
3300027876|Ga0209974_10301615All Organisms → cellular organisms → Bacteria613Open in IMG/M
3300027909|Ga0209382_10940442All Organisms → cellular organisms → Bacteria906Open in IMG/M
3300027909|Ga0209382_11959584All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium564Open in IMG/M
3300028587|Ga0247828_10937392All Organisms → cellular organisms → Bacteria561Open in IMG/M
(restricted) 3300031150|Ga0255311_1071425All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium739Open in IMG/M
3300031548|Ga0307408_101616372All Organisms → cellular organisms → Bacteria616Open in IMG/M
3300031716|Ga0310813_10059597All Organisms → cellular organisms → Bacteria2843Open in IMG/M
3300031796|Ga0318576_10363962All Organisms → cellular organisms → Bacteria → Proteobacteria683Open in IMG/M
3300031820|Ga0307473_10059321All Organisms → cellular organisms → Bacteria1860Open in IMG/M
3300031820|Ga0307473_10536577All Organisms → cellular organisms → Bacteria796Open in IMG/M
3300031820|Ga0307473_11304342All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium543Open in IMG/M
3300031890|Ga0306925_11666606All Organisms → cellular organisms → Bacteria617Open in IMG/M
3300031962|Ga0307479_11006370All Organisms → cellular organisms → Bacteria802Open in IMG/M
3300032180|Ga0307471_100553099All Organisms → cellular organisms → Bacteria1305Open in IMG/M
3300032180|Ga0307471_100798672All Organisms → cellular organisms → Bacteria → Proteobacteria1111Open in IMG/M
3300032205|Ga0307472_102078480All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium571Open in IMG/M
3300034113|Ga0364937_106229All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium578Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil20.73%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil17.07%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere10.37%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil9.15%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil7.93%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil4.27%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.88%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil3.66%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil2.44%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.44%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand2.44%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.83%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.83%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.83%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.61%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.61%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.61%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.61%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.61%
Sandy SoilEnvironmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil0.61%
SoilEnvironmental → Terrestrial → Soil → Sand → Desert → Soil0.61%
BiofilmEnvironmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm0.61%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment0.61%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.61%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.61%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.61%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.61%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.61%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.61%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000955Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300001431Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemlyEnvironmentalOpen in IMG/M
3300002558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cmEnvironmentalOpen in IMG/M
3300002560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cmEnvironmentalOpen in IMG/M
3300002562Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cmEnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004268Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBioEnvironmentalOpen in IMG/M
3300005171Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126EnvironmentalOpen in IMG/M
3300005172Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132EnvironmentalOpen in IMG/M
3300005174Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129EnvironmentalOpen in IMG/M
3300005175Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122EnvironmentalOpen in IMG/M
3300005177Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150EnvironmentalOpen in IMG/M
3300005553Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144EnvironmentalOpen in IMG/M
3300005555Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141EnvironmentalOpen in IMG/M
3300005556Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156EnvironmentalOpen in IMG/M
3300005558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147EnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005575Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151EnvironmentalOpen in IMG/M
3300005587Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103EnvironmentalOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006032Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145EnvironmentalOpen in IMG/M
3300006194Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1Host-AssociatedOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006846Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4Host-AssociatedOpen in IMG/M
3300006847Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006880Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3Host-AssociatedOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300007265Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300009803Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_40_50EnvironmentalOpen in IMG/M
3300009810Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_20_30EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010303Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015EnvironmentalOpen in IMG/M
3300010335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015EnvironmentalOpen in IMG/M
3300010336Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012355Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaGEnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300015053Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015054Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015245Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300017974Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MGEnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300020215Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_5EnvironmentalOpen in IMG/M
3300021344Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2EnvironmentalOpen in IMG/M
3300021476Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)EnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300025898Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025940Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026296Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026304Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)EnvironmentalOpen in IMG/M
3300026309Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)EnvironmentalOpen in IMG/M
3300026325Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)EnvironmentalOpen in IMG/M
3300026329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)EnvironmentalOpen in IMG/M
3300026330Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)EnvironmentalOpen in IMG/M
3300026331Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)EnvironmentalOpen in IMG/M
3300026334Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)EnvironmentalOpen in IMG/M
3300026343Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)EnvironmentalOpen in IMG/M
3300026358Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-14-BEnvironmentalOpen in IMG/M
3300026507Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-BEnvironmentalOpen in IMG/M
3300026528Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)EnvironmentalOpen in IMG/M
3300026542Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)EnvironmentalOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300026552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)EnvironmentalOpen in IMG/M
3300027273Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_40_50 (SPAdes)EnvironmentalOpen in IMG/M
3300027874Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)EnvironmentalOpen in IMG/M
3300027875Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027876Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)Host-AssociatedOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300028587Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3EnvironmentalOpen in IMG/M
3300031150 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH4_T0_E4EnvironmentalOpen in IMG/M
3300031548Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3Host-AssociatedOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M
3300031796Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031890Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300034113Sediment microbial communities from East River floodplain, Colorado, United States - 7_s17EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
INPhiseqgaiiFebDRAFT_10580211733300000364SoilMPVWQVVVILNLVLAMAVGVGYAGWGRRAAALDRE
JGI1027J12803_10202262723300000955SoilMPVWQVALVLNLTLAVGLGLGYATWGRRVEALDREFDAARAQVERLERERQACAAGARSGLQQWEGR
JGI10216J12902_11104290823300000956SoilMPVWQVVVILNLVLAMAVGVGYAGWGRRAAALDRELDAARVQTERLERERQA
F14TB_10126533933300001431SoilMPVWKVVMVLNGGLVVGLGLGYAAWGRRADALDREVDAARAQVERLERERQACA
JGI25385J37094_1017987823300002558Grasslands SoilMPVWQVALVLNFTLAVGLGLGYAGWGRRAEALDREVDAARAQVERLERERAACGPGTRAGEQQWE
JGI25383J37093_1001986813300002560Grasslands SoilMPVWQVALVLNLTFAVGLGLGYAGWGRRAAALDREFDAVRAQVERLEREREARAAGARLP
JGI25382J37095_1002604433300002562Grasslands SoilMPVWQVALVLNLTFAVGLGLGYAGWGRRAAALDREFDAVRAQVERLEREREACAGGARAGEQQ
JGI25382J37095_1018721013300002562Grasslands SoilMPVWQVALVLNFTLAVGLGLGYAGWGRRAEALDREVDAARAQVERL
Ga0062589_10257816023300004156SoilMPVWQVALVLNLALVVSLGLGYAGWGRRADALGRELEGARAQVERLERERAACAGGARAGAQQ
Ga0066398_1007507113300004268Tropical Forest SoilMPLWQVVVVLNLTFAVGLGLGYAGWGRRVGALEREVTADRVRIERLER
Ga0066677_1030032313300005171SoilMAVWQVALVLNLTLAVGLALGYAAWGRRAEALEREFGAARVQVERLERERAACAAGARAGEQQWEGRGVV
Ga0066683_1006458623300005172SoilMPLWQVALVLNLTFAVGLGLGYAGWGRRAEALDREFEAVRAQVERLERERQSCASGARAGEQQWN
Ga0066683_1051746813300005172SoilMPVWQVALVLNLTFAVGLGLGYAGWGRRAEALDREFDAARAQVERLERERAACAPG
Ga0066680_1018014723300005174SoilMPVWQVALVLNFTLAVGLGLGYAGWGRRAEALDREVDAARAQVERLERERAACGPG
Ga0066673_1062073623300005175SoilMPVWQVALVLNLTLAVGLALGYAAWGRRAEALDREFGDARVQVERLERERA
Ga0066690_1086868213300005177SoilMPVWQVALVLNLTFAVGLGLGYAGWGRRAEALDREFDAARAQVERLERER
Ga0066690_1096532113300005177SoilMPLWQVVVVLNLTFAVGLGLGYAGWGRQVGALEREVNADRARIERLERERGA
Ga0066388_10117425313300005332Tropical Forest SoilMHVWQAILFANLTLAVGLGIGYAGWGRRAEALDRELEAVRVR
Ga0070700_10200490323300005441Corn, Switchgrass And Miscanthus RhizosphereMPVWKVVLVLNLAFAVGLGLGYAAWGRRAEALDREFDAARAQVERLERERQ
Ga0070694_10049271313300005444Corn, Switchgrass And Miscanthus RhizosphereMPVWQVALVLNLVFAIALGLGYAGWGRRAATLDRELDAARVQVERLERERQA
Ga0070708_10002060083300005445Corn, Switchgrass And Miscanthus RhizosphereMPVWQVALVLNLTLAVGLGLGYAGWGRRAEALDREFDAVRAQLERLERER
Ga0070708_10053406123300005445Corn, Switchgrass And Miscanthus RhizosphereMPVWQVALLLNLTFALGLGLGYAGWGRRAEALDREFDGARAQIERLERERAACA
Ga0070707_10185917513300005468Corn, Switchgrass And Miscanthus RhizosphereMPVWQVALVLNLTLAVGLSLGYAGWGRRAEALNREFEGARIQLERVERERAAC
Ga0070697_10137298513300005536Corn, Switchgrass And Miscanthus RhizosphereMPVWKVVLVLNLAFAVGLGLGYAAWGRRAEALDREFDAARAQVERLERERQACAAGARAG
Ga0070695_10059366813300005545Corn, Switchgrass And Miscanthus RhizosphereMPVWQVALVLNLVLAVGLGLGYAGWGRRADALGRELDGLRAQVERLERERAACAGG
Ga0066701_1028401623300005552SoilMAVWQVALVLNLTLAVGLALGYAAWGRRAEALEREFGAARVQVEWLERERAACAAGARAGEQQWEG
Ga0066701_1040127413300005552SoilMPVWQVALVLNFTLAVGLGLGYAGWGRRAEALDREVDAARAQVERLERERAACGPGTRA
Ga0066695_1037533513300005553SoilMPVWQVALVLNLTLAVGLALGYAAWGRRAEALDREFGDARVQVERLERERAACAAGARAGEQQ
Ga0066692_1039333723300005555SoilMPVWQVALVLNFTLAVGLGLGYAGWGRRAEALDREVGAARAQVERLERERAACGPGTR
Ga0066707_1004924613300005556SoilMPVWQVALVLNLTLAVGLALGYAAWGRRAEALDREFGDARVQVERL
Ga0066707_1030545723300005556SoilMPVWQVALVLNLTFAVGLGLGYVGWGRRAEALDREFDAARAQVERLERERAACAPG
Ga0066698_1021294813300005558SoilMRVWQVAVVLNLTFAVGLGLGYAGWGRRADALDREFEAARAQVERLERERQ
Ga0066700_1034608123300005559SoilMPVWQVALVLNLTFAVGLGLGYAAWGRRAAALDREFDAARAQVERLEREREACAGGARAGEQ
Ga0066699_1085260623300005561SoilMPLWQVVVVLNLTFAVGLGLGYAGWGRRVGALEREVNADRARIERLERERGARARG
Ga0066702_1012358713300005575SoilMPVWQVALVLNLTLAVGLALGYAAWGRRAEALDREFGDARVQVERLERERAACAAGARA
Ga0066654_1022216213300005587SoilMRVWQVAVVLNLTFAVGLGLGYAGWGRRADALDREFEAARAQVER
Ga0066905_10075838613300005713Tropical Forest SoilMMPVWQVILVVNLTLAVGLGFGYAGWGRRAEGLERELEALRVRVEQLERERAACVTGARPGEQQWEARGVV
Ga0066905_10078135613300005713Tropical Forest SoilMPVWQVALALNLALAIGLGLGYAGWGRRAATLDREFEAARA
Ga0066903_10653911623300005764Tropical Forest SoilMPVWQVALVLNLTLAVGLGLGYAGLGRRAEALNREFEGARVKLERLEREWAACAAAGGGIAINSGT
Ga0066696_1112291523300006032SoilMRVWQVAVVLNLTFAVGLGLGYAGWGRRADALDRDFEAARAQVERLERE
Ga0075427_1007899413300006194Populus RhizosphereMPVWQVALVLNLALAVGLGLGYAGWGRRAEALDREFDAARVQVERL
Ga0066665_1032419313300006796SoilMPVWQVVLVLNLTLAVGLSLGYAGWGRRAEALNREFEGARIQLERLER
Ga0066665_1044340513300006796SoilMPVWQVALVLNLTFAVGLGLGYVGWGRRAEALDREFEAARAQVERLERERAACAPGARAGEQQWEGR
Ga0066660_1101394123300006800SoilMPVWQVALVLNLTFAVGLGLGYANWGRRAAALDREFDAARSQVERLERERQA
Ga0075428_10131279613300006844Populus RhizosphereMPVWKVAVALNLSFAVGLGLGYAGWGRRAEALDRDFEAARAQVERLERQQQACAGARAGEQRWEGRGI
Ga0075430_10005614243300006846Populus RhizosphereMRVWHAALLLNLALALGLGLGYTGWGRRAEALGRDVDTVRAQLERLERE
Ga0075431_10214892723300006847Populus RhizosphereMPLWQVVVVLNLTFAVGLGLGYAGWGRRVGALEREVNADRARIERLERE
Ga0075431_10218562623300006847Populus RhizosphereMPVWQVALMLNLTFAVGLGLGYAGWGRRAEALDREFDAAQAQVERLERERAACAPGARTGEQQWEG
Ga0075433_1080469113300006852Populus RhizosphereMAVWQVVLFVNLTLAVGLGLGYAGWGRKAEALDRALETSRAR
Ga0075425_10028732913300006854Populus RhizosphereMPLWQVVVVLNLTLAVTLGLGYAGWGRRVGALEREVSSDRARIERLERERDACARGAKAG
Ga0075425_10178640223300006854Populus RhizosphereMPVWQVAVMLNLVLAMAVGVGYAGWGRRAAALDRELDAARVQ
Ga0075429_10041115823300006880Populus RhizosphereMPVWQVAVMLNLVLAMAVGVGYAGWGRRAAALDRE
Ga0075429_10197749313300006880Populus RhizosphereMPLWQVVVVLNLTFAVGLGLGYAGWGRRVGALEREVTADRVRIERLEREREACAAGAR
Ga0075436_10046718413300006914Populus RhizosphereMPVWQVALVLNLTLAVGLGLGYAAWGRRAEALDREFDAARAQVERLERERQACAAGGHAGLQQWEGRG
Ga0079218_1081350823300007004Agricultural SoilMRVWHAALLMNLALALGLGLGYAAWGRRAEALGRDVEAVHAQVERLDRERQACASGGRAC
Ga0075435_10036301223300007076Populus RhizosphereMPLWQVVVVLNLTFAVGLGLGYAGWGRRVGALEREVTADRVRIERLEREREACAAGARAGEQQWEGR
Ga0075435_10138511023300007076Populus RhizosphereMPVWQVVLILNLALAVGLGLGYAGWGRRTEALDREFDAVRA
Ga0099791_1026113713300007255Vadose Zone SoilMMPVWQVALVLNLALAIGLGFGYAGWGRRAATLDREFEAARAHVERLEREREACAGGARTGQQQWSG
Ga0099794_1077845313300007265Vadose Zone SoilMPVWQVALVLNLTFAVGLGLGYAGWGRRAEAVDREFEAARAQVERLERERQGCAAGARAGEQQ
Ga0066710_10008740013300009012Grasslands SoilMPVWQVVLFANLMLAVGLGLGYAGWGRRAEALDRELEGVRARVEQLERERQACATGARAGEQQWEARGV
Ga0066710_10015368043300009012Grasslands SoilMMPAWQVALVLNLTLAVALGLGYAGWGRRPEALDRALDAARRQG
Ga0066710_10022102743300009012Grasslands SoilMPVWQVALVLNLTLAVGLSLGYAGWGRRAEALNREFEAARIQL
Ga0099829_1087249213300009038Vadose Zone SoilMMPVWQVALVLNLALAIGLGCGYAGWGRRAATLDREFEAARAHVERLEREREAC
Ga0099829_1125000113300009038Vadose Zone SoilMPVWQVVLFANLTLAVGLGLGYAGWGRRAEALDREFEA
Ga0099830_1080581723300009088Vadose Zone SoilMESRRAFVMPMWRVALVLNLTFAVALGFGYASWGRRAATLDR
Ga0099830_1156946023300009088Vadose Zone SoilMMPVWQVALVLNLALAIGLGFGYAGWGRRAATLDREFEAARAHVERLER
Ga0099827_1037362323300009090Vadose Zone SoilMPVWQVVLVLNLTLTVGLGLGYAAWGRRVEALDREFDAARVQVERLERERQACAAGARAG
Ga0066709_10033382213300009137Grasslands SoilMMPVWQVTLALNLALAVGLGLGYAGWGRRAATLDREFEAARAHVERL
Ga0066709_10414308913300009137Grasslands SoilMPVWQVALVLNLTFAVGLGLGYAGWGRRAEALDREFDAARAQVERLERERAACAPGV
Ga0066709_10414733523300009137Grasslands SoilMPVWQVALVLNLTLAVGLSLGYAGWGRRAEALNREFEGARIQLERLERERAACTGGAGAREQQWDGR
Ga0114129_1136303113300009147Populus RhizosphereMPVWQVVLVLNLVFAMAVGVGYAGWGRPAAALDRELDAAR
Ga0075423_1238030623300009162Populus RhizosphereMPVWQVALLLNLTFALGLGLGYAGWGRRAEALDREFDGA
Ga0126374_1111819613300009792Tropical Forest SoilMPVWQVVVMLNLTLLVGLGVGYAGWGRKVAALDRDFATLRAQVERLERERAACAGGGRAGEQQ
Ga0105065_101791813300009803Groundwater SandMPVWQVALVLNLTFAVGLGLGYAGWGRRAEALDREFDAARAQVERLE
Ga0105088_111116013300009810Groundwater SandMMPVWQVMLVVNLTLAVGLSLGYAGWGRRAEGLERELGAVRARV
Ga0126384_1064922213300010046Tropical Forest SoilMPVWQVALLLNLALAVGLGLGYASWGRQAEALHHDLDVSQARVETLEREQR
Ga0126382_1066099023300010047Tropical Forest SoilMMPVWQVVLVLNLTLAVGLGLGYAGWGRRAAALDQAL
Ga0126373_1236982023300010048Tropical Forest SoilMMPVWQGVLALNLALAIGLGLGYAGWGRRAATLDREFEAARAQVERLERERDACAGGARS
Ga0134082_1002737223300010303Grasslands SoilMPVWQVALVLNLTLAVGLTLGYAAWGRRAEALEREFGAARVQVERLER
Ga0134063_1007639323300010335Grasslands SoilMMPVWQVALVLNLVFAVGLGLGYAGWGRRAAALDRDVDAARAQVERLERERVACAA
Ga0134063_1042614123300010335Grasslands SoilMMPVWQVALVLNLVFAVGLGLGYAGWGRRIAALDRDV
Ga0134071_1015684113300010336Grasslands SoilMPVWQVALVLNLTFAVVLGLGYAGWGRRAEALDREFDAARAQVERLERERAACAPGV
Ga0126372_1156450113300010360Tropical Forest SoilMMPVWQMVLFLNLTLVVGLGLGYAGWGRRAEGLGRELEAVRVRVERLERERAACVAGA
Ga0126377_1194954213300010362Tropical Forest SoilMPLWQVVVVLNLTFAVTLGLGYAGWGRRVGALEREVNADRARIEQLERERDACARGGK
Ga0126381_10051194423300010376Tropical Forest SoilMLNVALAIGLGLGYAGWGRRTEALDRELEATRLQLERLDRERQACAAGGRA
Ga0126381_10443029323300010376Tropical Forest SoilMMPVWQVVLALNLALAIGLGLGYAGWGRRAATLDREFEAARAHVERLEREREACAGGARTGQQQWSGRG
Ga0126383_1254478613300010398Tropical Forest SoilMPVWQVVVMLNLTLILGLGVGYAGWGRKVAALDRDFATLRAQVERLERERAACAGGGRAGEQQWE
Ga0105246_1127417413300011119Miscanthus RhizosphereMTLNLVLALGIGMGYGAWGHRAATLDREVSAAMAQVERLERERQACAAGARAGEQQWEGRGIVRAAY
Ga0137389_1086137013300012096Vadose Zone SoilMPVWQVVLVVNLTFAVGLGLGYAGWGRRVEALDRELEATRARVERLEREQQARATGARAGEQQWE
Ga0137363_1109728313300012202Vadose Zone SoilMMPVWQVALVLNLALAIGLGLGYAGWGRRAATLDREFEAARAHVERLERERE
Ga0137362_1062849113300012205Vadose Zone SoilMPVWQVALVLNLTLAVGLALGYAAWGRRAEALDREFGDARVQVERLERE
Ga0137362_1092955123300012205Vadose Zone SoilMPVWQVVLVLNLTLTVGLGLGYAAWGRRVEGLDREYDAARVQVERLER
Ga0137380_1138919023300012206Vadose Zone SoilMAVWQVVLVLNLTLAVGLGLGYAGWGRRTEALDRELDAARAQVERLERARQACAAGARGGEQQWE
Ga0137378_1186416013300012210Vadose Zone SoilMAVWQVVLFANLTLAVGLGTGYAAWGRAAGTLDRELASV
Ga0137369_1078725223300012355Vadose Zone SoilMPLWQVALLLNLALTVGLGLGYAGWGRRTEALDREFDAA
Ga0137371_1019551813300012356Vadose Zone SoilMMPMWQVALVLNVVFAVGLGLGYVGWGRRAAALDRDVDAARAQVERLERE
Ga0137385_1003197513300012359Vadose Zone SoilMMPVWQVALVLNLVFAVGLGLGYAGWGRRAAALDRDVDAAR
Ga0137385_1039376413300012359Vadose Zone SoilMPVWQVALVLNLTFAVGLGLGYVGWGRRADALDREFDAARAQVERLERERAACAPGARAGEQQWEGR
Ga0137361_1073612123300012362Vadose Zone SoilMPVWQVALVLNFTLAVGLGLGYAGWGRRAEALDREVGAARAQVERLERE
Ga0137390_1197642113300012363Vadose Zone SoilMPVWQVALVLNLTLAVGLGLGYAAWGRRVEGLDREFDAARAQVERLERERQACAAGARAGLQQWE
Ga0137397_1074743923300012685Vadose Zone SoilMAVWQVVLFANLTLAVGLGTGYAAWGRAAGTLDRELDSVRARVEQLERERQAH
Ga0137395_1055426113300012917Vadose Zone SoilMPVWQVVLVLNLTLTVGLGLGYAAWGRRVEGLDREFDAARAQVERLERERQACAAGARAGLQQWEARG
Ga0137419_1122198813300012925Vadose Zone SoilMAVWQVALVLNLTLAVGLALGYAAWGRRAEALDREFGAARVQ
Ga0137416_1005193613300012927Vadose Zone SoilMPVWQVALVLNLTFAVGLGLGYAGWGRRAEALDREFEAARAQVDRLERERQACAAGARSGEQQW
Ga0137407_1000802613300012930Vadose Zone SoilMMPVWQVVLVLNVVFAVGLGLGYAGWGRRVAALDRDVDAARAQVERLERERQACAAGARAGEQQWE
Ga0126375_1175267223300012948Tropical Forest SoilMPVWQVVVLLNLTLILGLGVGYAGWGRKVAALDRDFATLRAQVERLERERAACASGGRAG
Ga0164299_1153809913300012958SoilMRTFVMPVWQVVLLLNLTLAVGLGFGYGVWGHRLAALDGELKTVQAQVERLERERQACAAGAR
Ga0126369_1018471723300012971Tropical Forest SoilMPVWKVALVLNVALAIGLGLGYAGWGRRTEALDRELEATRLQLERLDRERQ
Ga0126369_1146140313300012971Tropical Forest SoilMMPVWQGVLALNLALALGLGLGYAGWGHRAATLDREFEATRAQVERLERERDACAGGARSGQQQWSGHGVVRA
Ga0157375_1230199523300013308Miscanthus RhizosphereMPVWQVALVLNLALVVSLGLGYAGWGRRADALGRELEGARAQVERLERERAACAGGARAGAQQGCGFRRSRRLGGR*
Ga0157380_1145984923300014326Switchgrass RhizosphereMPVWQVVVTLNLVLALGIGMGYGAWGHRAVAADREASAAMAQVERLERERQACTAGARAG
Ga0137405_104018013300015053Vadose Zone SoilMPVWQVALVLNLTLAVGLALGYAAWGRRAEALDREFGDARVQVERLERERAACAAGARAGEQQWEG
Ga0137420_101885813300015054Vadose Zone SoilMPVWQVVLLVNLTLAVGLGLGYADWGRRADRLYQE
Ga0137409_1136916413300015245Vadose Zone SoilMMPVWQVALVLNLALAIGLGFGYAGWGRRAATLDREFEAARAHVERLEREREACAGGARTGQQQWS
Ga0132257_10153365813300015373Arabidopsis RhizosphereMPVWQVAVMLNLVLAMAVGVGYAGWGRRAAALDRELDAARVQAERLERERQAC
Ga0132255_10244927023300015374Arabidopsis RhizosphereMVPLWQVALVLNLVFALGLGLGYACWGRRAAALDRDLDVARTAFERGDRERRACAAGAR
Ga0132255_10407880923300015374Arabidopsis RhizosphereMPVWQVAVMLNLVLAMAVGVGYAGWGRRAAALDRELDAARVQAERLE
Ga0187777_1049784723300017974Tropical PeatlandMPVWQVVLVLNLALAVGLGLGYGGWGRRMDALDREA
Ga0066655_1072731313300018431Grasslands SoilMPVWQVALVLNLTLAVGLALGYAAWGRRAEALDREFGDARVQVVRLERERAHELVARLVEALP
Ga0066662_1074244013300018468Grasslands SoilMPVWQVVLLVNLTLAVGLGLGYADWGRRADRLYQELEATRARVEQLERERAACTTG
Ga0196963_1018978623300020215SoilMRVWQAAVLINLALALGIGLGYAGWGRRAEALGRNVD
Ga0193719_1044015013300021344SoilMPVWQVALVLNLALAIGLGFGYAGWGRRAATLDREFEAARAHVERLEREREACAGG
Ga0187846_1040166513300021476BiofilmMPVWQVVLVLNLALAVGLGFGYAGWGRRADTLGREFDAAQAKVERLERERQ
Ga0210402_1108757113300021478SoilMPVWQVVLILNLALAVGLGLGYAGWGRRTEALDRE
Ga0126371_1005856153300021560Tropical Forest SoilMPVWKVALVLNVALVIGLGLGYAGWGRRTEALDRELEATRA
Ga0207692_1072323913300025898Corn, Switchgrass And Miscanthus RhizosphereMPVWQVVLLLNLTLAVGLGFGYGVWGHRLGALDAELKAVQAQVERLDRERQACAAGARFGEQEW
Ga0207691_1123500013300025940Miscanthus RhizosphereMLPVWQVALVLNLVFALGLGLGYAGWGRRAAALDRDVDAARTQLERVE
Ga0209235_105135823300026296Grasslands SoilMPVWQVVLVLNVVFAVGLGLGYAGWGRRVAALDRDVDAARAQVERLERERQACAAG
Ga0209240_124056513300026304Grasslands SoilMPMWQVVLILNLALAVGLGLGYAGWGRRTEALDRELDAARAQVEQLERERQACAAGAR
Ga0209055_104631613300026309SoilMPVWQVALVLNLTLAVGLALGYAAWGRRAEALDREFGDARVQVERLERERAACAAGARAGEQQWEGRGV
Ga0209152_1007327313300026325SoilMPVWQVVLLVNLTLAVGLGLGYADWGRRADRLYQELAATRA
Ga0209375_103340913300026329SoilMPVWQVALVLNLTFAVGLGLGYVGWGRRAEALDREFDAARAQVERLER
Ga0209473_104657913300026330SoilMPMWQVALVLNLTLAVGLALGYAAWGRRAEALDREFGDARVQVERLERERAACAAGARAGEQQWEG
Ga0209267_118739523300026331SoilMPLWQVALVLNLTFAVGLGLGYAGWGRRAEALDREFEAARAQVERLERERQACASGARAGEQQWNGR
Ga0209377_114366423300026334SoilMPVWQVALVLNFTLAVGLGLGYAGWGRRAEALDREVDAARAQVERLER
Ga0209159_118892713300026343SoilMPVWQVALVLNLTFAVGLGLGYAGWGRRAEALDREFDAARAQVERLERERAACAPGVRAGEQQWEGRG
Ga0209159_120864223300026343SoilMPVWQVALVLNLTLAVGLALGYAAWGRRAEALDREFGDARVQVERLERERAAC
Ga0257166_106022023300026358SoilMPVWQVVLVLNLTPTVGLGLGYAAWGRRVEALDREFDAARVQVERLERERQACAAG
Ga0257165_105028023300026507SoilMPVWQVVLILNLALAVGLGLGYAGWGRRTEALDREL
Ga0209378_103355713300026528SoilMPVWQVALVLNLTFAVGLGLGYVGWGRRAEALDREFDAARA
Ga0209805_106580023300026542SoilMPVWQVVLLVNLTLDVGLGLGYADWGRRADRLYQE
Ga0209648_1004195243300026551Grasslands SoilMPMWQVVLILNLALAVGLGLGYAGWGRRTEALDRELDAARAQVEQLERERQACAA
Ga0209577_1060583923300026552SoilMMPVWQVALVLNLVFAVGLGLGYAGWGRRIAALDRDVDAARAQVERLEREREACAAGARAGEQQWEGR
Ga0209886_106487113300027273Groundwater SandMPVWQVALVLNLTFAVGLGLGYAGWGRRAEALDRE
Ga0209886_107373313300027273Groundwater SandMPVWQVALVLNLTFAVGLGLGYAGWGRRAEALDREFDAARAQVERLERERA
Ga0209465_1061245813300027874Tropical Forest SoilMPLWQVIVVLNLTFGVALGLGYAGWGRRVGALEREVTADR
Ga0209283_1011744643300027875Vadose Zone SoilMPVWQVALVLNFALAIGLGLGYAGWGRRAATLDREFEAARAHVERLEREREACAGGARTG
Ga0209974_1030161513300027876Arabidopsis Thaliana RhizosphereMPVWQVTLLLNLTLAVGLGLGYAGWGRRADALDRDLDGARA
Ga0209382_1094044223300027909Populus RhizosphereMRVWHAAFLMNLALALGLGLGYAAWGRRAEALGRDIEAVHAQVERLERERQ
Ga0209382_1195958423300027909Populus RhizosphereMPVWKVAVALNLSFAVGLGLGYAGWGRRAEALDRDFEATRA
Ga0247828_1093739233300028587SoilMRVWHAAFLMNLALALGLGLGYAAWGRRAEALDLCVD
(restricted) Ga0255311_107142513300031150Sandy SoilMPVWQVVLVLNLTLTVGLGLGYAAWGRRVEALDREFDAARVQVERLERERQACAAGARAGLQ
Ga0307408_10161637213300031548RhizosphereMRVWHAALLINLALALGLGLGYAAWGRRAEALGRDVEAVRAQVERLER
Ga0310813_1005959743300031716SoilMVPLWQVALVLNLVFALGLGLGYAAWGRRAAALDRDLDAARAQLERVERERRACAA
Ga0318576_1036396213300031796SoilMPVWQVVLALNLALALGLGLGYAGWGRRAATLDREFEAARAQVERLERERDACAGGARSGQQQWSGH
Ga0307473_1005932123300031820Hardwood Forest SoilMPVWQVALVLNLVFAIVLGLGYAGWGRRAATLDRELDAARVQVERLERERRACAGG
Ga0307473_1053657723300031820Hardwood Forest SoilMPVWQVALVLNLTLAVGLALGYAAWGRRAEALDREFGATRV
Ga0307473_1130434223300031820Hardwood Forest SoilMPVWQVALVLNLTLAVGLGLGYAAWGRRVEALDREFDAARAQ
Ga0306925_1166660613300031890SoilMPVWQVVLALNLALALGLGLGYAGWGRRAATLDREFEAARA
Ga0307479_1100637023300031962Hardwood Forest SoilMPVWQVVILLNLTLAVGLGVGYGVWGHRLGALDGELKAVQAQVERLDRERQACAAGARLGEQEWEGRG
Ga0307471_10055309923300032180Hardwood Forest SoilMPLWQVVVVLNLTFAVGLGLGYAGWGRRVGALEREVTADRV
Ga0307471_10079867223300032180Hardwood Forest SoilMPVWQVALVLNLTFAVGLGLGYAGWGRRAEALDREFDAARAQVERLERERQACAAGARAGEQ
Ga0307472_10207848023300032205Hardwood Forest SoilMPVWQVALVLNLTFAVGLGLGYAGWGRRAEALDREFDAARAQVERLERERATCAPGARTGEQ
Ga0364937_106229_441_5783300034113SedimentMPVWQVALVLNLTFAVGLGLGYAGWGRRAEALDREFEAARAQVERL


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