Metagenome / Metatranscriptome Family F039256

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F039256
Family Type	Metagenome / Metatranscriptome
Number of Sequences	164
Average Sequence Length	63 residues
Representative Sequence	MFALSDSQLRTIWNAADGLPANKRGVFLERIVAWLQFRGGRFIDRDFDDAVRLALRGLIHESAA
Number of Associated Samples	103
Number of Associated Scaffolds	164

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	4.27 %
% of genes near scaffold ends (potentially truncated)	23.17 %
% of genes from short scaffolds (< 2000 bps)	88.41 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.75

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (75.610 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (17.073 % of family members)
Environment Ontology (ENVO)	Unclassified (39.024 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (65.854 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 44.57% β-sheet: 2.17% Coil/Unstructured: 53.26%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.75
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.75
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
e.81.1.1: CRISPR associated protein CasA/Cse1	d4an8a_	4an8	0.72747
f.35.1.1: Multidrug efflux transporter AcrB transmembrane domain	d1iwga7	1iwg	0.69217
a.74.1.1: Cyclin	d1g3nc1	1g3n	0.67894
a.74.1.1: Cyclin	d4eojb1	4eoj	0.66141
a.74.1.1: Cyclin	d1w98b2	1w98	0.66115

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 164 Family Scaffolds
PF01068	DNA_ligase_A_M	3.66
PF00550	PP-binding	1.83
PF00027	cNMP_binding	1.22
PF13396	PLDc_N	1.22
PF00230	MIP	1.22
PF01717	Meth_synt_2	1.22
PF01075	Glyco_transf_9	1.22
PF03772	Competence	1.22
PF06742	DUF1214	0.61
PF14237	GYF_2	0.61
PF00334	NDK	0.61
PF13975	gag-asp_proteas	0.61
PF03567	Sulfotransfer_2	0.61
PF05974	DUF892	0.61
PF03477	ATP-cone	0.61
PF04234	CopC	0.61
PF01726	LexA_DNA_bind	0.61
PF02518	HATPase_c	0.61
PF06778	Chlor_dismutase	0.61
PF01925	TauE	0.61
PF00719	Pyrophosphatase	0.61
PF02660	G3P_acyltransf	0.61

COG ID	Name	Functional Category	% Frequency in 164 Family Scaffolds
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	3.66
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	3.66
COG0580	Glycerol uptake facilitator or related aquaporin (Major Intrinsic protein Family)	Carbohydrate transport and metabolism [G]	1.22
COG0620	Methionine synthase II (cobalamin-independent)	Amino acid transport and metabolism [E]	1.22
COG0658	DNA uptake channel protein ComEC, N-terminal domain	Intracellular trafficking, secretion, and vesicular transport [U]	1.22
COG0859	ADP-heptose:LPS heptosyltransferase	Cell wall/membrane/envelope biogenesis [M]	1.22
COG0105	Nucleoside diphosphate kinase	Nucleotide transport and metabolism [F]	0.61
COG0221	Inorganic pyrophosphatase	Energy production and conversion [C]	0.61
COG0344	Phospholipid biosynthesis protein PlsY, probable glycerol-3-phosphate acyltransferase	Lipid transport and metabolism [I]	0.61
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	0.61
COG2372	Copper-binding protein CopC (methionine-rich)	Inorganic ion transport and metabolism [P]	0.61
COG3253	Coproheme decarboxylase/chlorite dismutase	Coenzyme transport and metabolism [H]	0.61
COG3685	Ferritin-like metal-binding protein YciE	Inorganic ion transport and metabolism [P]	0.61
COG5361	Uncharacterized conserved protein	Mobilome: prophages, transposons [X]	0.61
COG5402	Uncharacterized protein, contains DUF1214 domain	Function unknown [S]	0.61

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.61 %
All Organisms	root	All Organisms	24.39 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.61 %
cellular organisms	root	All Organisms → cellular organisms	24.39 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.61 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	24.39 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.61 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	21.34 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.61 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.61 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	18.29 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.61 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.61 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.61 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	9.76 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	3.66 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.61 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.61 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.61 %
Enterobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.61 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.66 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.05 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1.22 %
Aurantimonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aurantimonadaceae	0.61 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.61 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.61 %
Hyphomicrobiales incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis	0.61 %
Enterobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	0.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.61 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.66 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3.05 %
Pseudorhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes	0.61 %
Escherichia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia	0.61 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.61 %
Nocardiopsaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae	0.61 %
Novosphingobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Novosphingobium	0.61 %
Aurantimonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aurantimonadaceae → Aurantimonas	0.61 %
unclassified Hyphomicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae	0.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.61 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.66 %
Pseudorhodoplanes sinuspersici	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → Pseudorhodoplanes sinuspersici	0.61 %
Bradyrhizobium cytisi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium cytisi	0.61 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.61 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.61 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.61 %
unclassified Aurantimonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aurantimonadaceae → Aurantimonas → unclassified Aurantimonas	0.61 %
unclassified Novosphingobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Novosphingobium → unclassified Novosphingobium	0.61 %
Escherichia coli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	0.61 %
Nocardiopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Nocardiopsis	0.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.61 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.66 %
Bradyrhizobium sp. cf659	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. cf659	0.61 %
Novosphingobium sp. Gsoil 351	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Novosphingobium → unclassified Novosphingobium → Novosphingobium sp. Gsoil 351	0.61 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.61 %
Aurantimonas sp. DM33-3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aurantimonadaceae → Aurantimonas → unclassified Aurantimonas → Aurantimonas sp. DM33-3	0.61 %
unclassified Nocardiopsis	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Nocardiopsis → unclassified Nocardiopsis	0.61 %
Pseudorhodoplanes sinuspersici	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → Pseudorhodoplanes sinuspersici	0.61 %
Bradyrhizobium cytisi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium cytisi	0.61 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.61 %
Escherichia coli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	0.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.61 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.66 %
Nocardiopsis sp. B62	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Nocardiopsis → unclassified Nocardiopsis → Nocardiopsis sp. B62	0.61 %
Bradyrhizobium sp. cf659	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. cf659	0.61 %
Novosphingobium sp. Gsoil 351	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Novosphingobium → unclassified Novosphingobium → Novosphingobium sp. Gsoil 351	0.61 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.61 %
Aurantimonas sp. DM33-3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aurantimonadaceae → Aurantimonas → unclassified Aurantimonas → Aurantimonas sp. DM33-3	0.61 %
Pseudorhodoplanes sinuspersici	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → Pseudorhodoplanes sinuspersici	0.61 %
Bradyrhizobium cytisi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium cytisi	0.61 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.61 %
Escherichia coli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	0.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.61 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000597\|AF_2010_repII_A1DRAFT_10002430	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4937	Open in IMG/M
3300000816\|AF_2010_repII_A10DRAFT_1020599	Not Available	697	Open in IMG/M
3300001867\|JGI12627J18819_10131670	Not Available	1024	Open in IMG/M
3300003505\|JGIcombinedJ51221_10145038	Not Available	957	Open in IMG/M
3300003505\|JGIcombinedJ51221_10156163	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	922	Open in IMG/M
3300004479\|Ga0062595_100308275	Not Available	1072	Open in IMG/M
3300004633\|Ga0066395_10050676	Not Available	1836	Open in IMG/M
3300005179\|Ga0066684_10398406	Not Available	924	Open in IMG/M
3300005187\|Ga0066675_11166633	Not Available	573	Open in IMG/M
3300005332\|Ga0066388_100491471	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1864	Open in IMG/M
3300005332\|Ga0066388_100791440	Not Available	1542	Open in IMG/M
3300005332\|Ga0066388_101323208	Not Available	1244	Open in IMG/M
3300005332\|Ga0066388_103161416	Not Available	841	Open in IMG/M
3300005332\|Ga0066388_103500855	Not Available	801	Open in IMG/M
3300005332\|Ga0066388_103554989	Not Available	796	Open in IMG/M
3300005332\|Ga0066388_104397551	Not Available	718	Open in IMG/M
3300005332\|Ga0066388_104691317	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	695	Open in IMG/M
3300005332\|Ga0066388_105338429	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	652	Open in IMG/M
3300005332\|Ga0066388_105867903	Not Available	621	Open in IMG/M
3300005332\|Ga0066388_106141092	All Organisms → cellular organisms → Bacteria → Proteobacteria	606	Open in IMG/M
3300005332\|Ga0066388_107521574	Not Available	546	Open in IMG/M
3300005363\|Ga0008090_14201593	Not Available	537	Open in IMG/M
3300005363\|Ga0008090_15810857	Not Available	1171	Open in IMG/M
3300005435\|Ga0070714_100623810	Not Available	1037	Open in IMG/M
3300005435\|Ga0070714_100697253	Not Available	980	Open in IMG/M
3300005435\|Ga0070714_102248304	Not Available	531	Open in IMG/M
3300005436\|Ga0070713_100405547	Not Available	1274	Open in IMG/M
3300005436\|Ga0070713_102389389	Not Available	511	Open in IMG/M
3300005437\|Ga0070710_11280220	Not Available	545	Open in IMG/M
3300005560\|Ga0066670_10551919	Not Available	704	Open in IMG/M
3300005587\|Ga0066654_10647025	Not Available	588	Open in IMG/M
3300005764\|Ga0066903_100523276	Not Available	2020	Open in IMG/M
3300005764\|Ga0066903_100694635	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aurantimonadaceae → Aurantimonas → unclassified Aurantimonas → Aurantimonas sp. DM33-3	1792	Open in IMG/M
3300005764\|Ga0066903_100841300	Not Available	1649	Open in IMG/M
3300005764\|Ga0066903_100843670	Not Available	1647	Open in IMG/M
3300005764\|Ga0066903_102561217	Not Available	988	Open in IMG/M
3300005764\|Ga0066903_105675527	Not Available	656	Open in IMG/M
3300005764\|Ga0066903_105705410	Not Available	654	Open in IMG/M
3300005764\|Ga0066903_108246363	Not Available	533	Open in IMG/M
3300006028\|Ga0070717_12149458	Not Available	502	Open in IMG/M
3300006031\|Ga0066651_10543104	Not Available	616	Open in IMG/M
3300006047\|Ga0075024_100902336	Not Available	503	Open in IMG/M
3300006059\|Ga0075017_100560824	Not Available	870	Open in IMG/M
3300006086\|Ga0075019_10248642	Not Available	1061	Open in IMG/M
3300006175\|Ga0070712_100068091	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2535	Open in IMG/M
3300006755\|Ga0079222_10029183	All Organisms → cellular organisms → Bacteria	2329	Open in IMG/M
3300006755\|Ga0079222_10249625	Not Available	1115	Open in IMG/M
3300006806\|Ga0079220_10264773	Not Available	1038	Open in IMG/M
3300006806\|Ga0079220_11432309	Not Available	588	Open in IMG/M
3300006903\|Ga0075426_10133263	All Organisms → cellular organisms → Bacteria → Proteobacteria	1789	Open in IMG/M
3300006914\|Ga0075436_101448421	Not Available	521	Open in IMG/M
3300006954\|Ga0079219_10061737	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1670	Open in IMG/M
3300009792\|Ga0126374_10156767	Not Available	1388	Open in IMG/M
3300009792\|Ga0126374_10647313	Not Available	787	Open in IMG/M
3300010046\|Ga0126384_12278398	Not Available	522	Open in IMG/M
3300010048\|Ga0126373_10078931	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2994	Open in IMG/M
3300010048\|Ga0126373_10085082	Not Available	2892	Open in IMG/M
3300010048\|Ga0126373_10369371	Not Available	1452	Open in IMG/M
3300010048\|Ga0126373_10835745	Not Available	984	Open in IMG/M
3300010048\|Ga0126373_10883266	Not Available	958	Open in IMG/M
3300010048\|Ga0126373_12737185	Not Available	550	Open in IMG/M
3300010048\|Ga0126373_12951885	Not Available	530	Open in IMG/M
3300010360\|Ga0126372_11260619	Not Available	766	Open in IMG/M
3300010361\|Ga0126378_11401730	Not Available	791	Open in IMG/M
3300010361\|Ga0126378_12740635	Not Available	563	Open in IMG/M
3300010361\|Ga0126378_12854214	Not Available	551	Open in IMG/M
3300010366\|Ga0126379_10443236	Not Available	1358	Open in IMG/M
3300010366\|Ga0126379_12507873	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300010376\|Ga0126381_101308789	Not Available	1047	Open in IMG/M
3300010398\|Ga0126383_12246995	Not Available	632	Open in IMG/M
3300012971\|Ga0126369_11483374	Not Available	768	Open in IMG/M
3300015357\|Ga0134072_10365253	Not Available	558	Open in IMG/M
3300015371\|Ga0132258_10105183	All Organisms → cellular organisms → Bacteria → Proteobacteria	6666	Open in IMG/M
3300015371\|Ga0132258_10351802	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3643	Open in IMG/M
3300015371\|Ga0132258_10597722	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2770	Open in IMG/M
3300015374\|Ga0132255_104069091	Not Available	620	Open in IMG/M
3300016270\|Ga0182036_11613246	Not Available	546	Open in IMG/M
3300016319\|Ga0182033_10487090	Not Available	1057	Open in IMG/M
3300016341\|Ga0182035_10363225	Not Available	1207	Open in IMG/M
3300016341\|Ga0182035_11647929	Not Available	579	Open in IMG/M
3300016341\|Ga0182035_11820462	Not Available	551	Open in IMG/M
3300016371\|Ga0182034_10671346	Not Available	879	Open in IMG/M
3300016387\|Ga0182040_11369125	Not Available	599	Open in IMG/M
3300016404\|Ga0182037_11765106	Not Available	552	Open in IMG/M
3300016422\|Ga0182039_10922783	Not Available	780	Open in IMG/M
3300016445\|Ga0182038_10049067	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2805	Open in IMG/M
3300017822\|Ga0187802_10000464	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	9911	Open in IMG/M
3300017822\|Ga0187802_10005889	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3745	Open in IMG/M
3300017928\|Ga0187806_1144531	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	782	Open in IMG/M
3300017932\|Ga0187814_10040222	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Nocardiopsis → unclassified Nocardiopsis → Nocardiopsis sp. B62	1728	Open in IMG/M
3300017933\|Ga0187801_10073788	Not Available	1266	Open in IMG/M
3300017937\|Ga0187809_10024640	Not Available	1920	Open in IMG/M
3300017937\|Ga0187809_10063228	Not Available	1205	Open in IMG/M
3300017942\|Ga0187808_10260801	Not Available	776	Open in IMG/M
3300017955\|Ga0187817_10089163	Not Available	1933	Open in IMG/M
3300017959\|Ga0187779_10556802	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	764	Open in IMG/M
3300017961\|Ga0187778_10474683	Not Available	828	Open in IMG/M
3300017973\|Ga0187780_10323197	Not Available	1087	Open in IMG/M
3300017974\|Ga0187777_11119474	Not Available	573	Open in IMG/M
3300017974\|Ga0187777_11234198	Not Available	548	Open in IMG/M
3300017993\|Ga0187823_10008398	Not Available	2412	Open in IMG/M
3300017993\|Ga0187823_10179065	Not Available	684	Open in IMG/M
3300017994\|Ga0187822_10030503	Not Available	1432	Open in IMG/M
3300017995\|Ga0187816_10019399	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2649	Open in IMG/M
3300017995\|Ga0187816_10054418	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Novosphingobium → unclassified Novosphingobium → Novosphingobium sp. Gsoil 351	1678	Open in IMG/M
3300018001\|Ga0187815_10021387	Not Available	2773	Open in IMG/M
3300018001\|Ga0187815_10028358	Not Available	2376	Open in IMG/M
3300018007\|Ga0187805_10229211	Not Available	850	Open in IMG/M
3300018029\|Ga0187787_10415122	Not Available	534	Open in IMG/M
3300018060\|Ga0187765_10202630	Not Available	1147	Open in IMG/M
3300018064\|Ga0187773_10803215	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	598	Open in IMG/M
3300020579\|Ga0210407_11332689	Not Available	535	Open in IMG/M
3300020580\|Ga0210403_11372960	Not Available	536	Open in IMG/M
3300020581\|Ga0210399_10166601	Not Available	1826	Open in IMG/M
3300020581\|Ga0210399_10815133	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	761	Open in IMG/M
3300021171\|Ga0210405_10251907	Not Available	1397	Open in IMG/M
3300021407\|Ga0210383_10843766	Not Available	783	Open in IMG/M
3300021560\|Ga0126371_10109841	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	2762	Open in IMG/M
3300021560\|Ga0126371_10242710	All Organisms → cellular organisms → Bacteria	1913	Open in IMG/M
3300021560\|Ga0126371_10330898	Not Available	1655	Open in IMG/M
3300021560\|Ga0126371_10432669	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	1461	Open in IMG/M
3300021560\|Ga0126371_10711405	Not Available	1152	Open in IMG/M
3300021560\|Ga0126371_11361850	All Organisms → cellular organisms → Bacteria → Proteobacteria	841	Open in IMG/M
3300021560\|Ga0126371_11391053	Not Available	833	Open in IMG/M
3300021560\|Ga0126371_12374741	Not Available	641	Open in IMG/M
3300021560\|Ga0126371_12502784	Not Available	625	Open in IMG/M
3300025915\|Ga0207693_10064580	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2867	Open in IMG/M
3300025928\|Ga0207700_10774988	Not Available	857	Open in IMG/M
3300025928\|Ga0207700_11380467	Not Available	627	Open in IMG/M
3300027765\|Ga0209073_10213333	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium cytisi	738	Open in IMG/M
3300027765\|Ga0209073_10296852	Not Available	639	Open in IMG/M
3300027874\|Ga0209465_10176030	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1066	Open in IMG/M
3300027898\|Ga0209067_10265681	Not Available	936	Open in IMG/M
3300027915\|Ga0209069_10894296	Not Available	537	Open in IMG/M
3300031446\|Ga0170820_11973474	Not Available	872	Open in IMG/M
3300031474\|Ga0170818_110081382	Not Available	843	Open in IMG/M
3300031545\|Ga0318541_10716092	Not Available	559	Open in IMG/M
3300031564\|Ga0318573_10411041	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. cf659	727	Open in IMG/M
3300031573\|Ga0310915_11052293	Not Available	566	Open in IMG/M
3300031716\|Ga0310813_11785153	Not Available	577	Open in IMG/M
3300031719\|Ga0306917_10912670	Not Available	687	Open in IMG/M
3300031744\|Ga0306918_11162317	Not Available	597	Open in IMG/M
3300031744\|Ga0306918_11200522	Not Available	586	Open in IMG/M
3300031751\|Ga0318494_10267300	Not Available	983	Open in IMG/M
3300031753\|Ga0307477_10366902	Not Available	989	Open in IMG/M
3300031754\|Ga0307475_10245269	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1435	Open in IMG/M
3300031754\|Ga0307475_10807847	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	744	Open in IMG/M
3300031879\|Ga0306919_11288778	Not Available	553	Open in IMG/M
3300031879\|Ga0306919_11409952	Not Available	526	Open in IMG/M
3300031880\|Ga0318544_10347923	Not Available	576	Open in IMG/M
3300031890\|Ga0306925_10592680	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1171	Open in IMG/M
3300031890\|Ga0306925_11685950	Not Available	612	Open in IMG/M
3300031912\|Ga0306921_11008828	Not Available	938	Open in IMG/M
3300031942\|Ga0310916_10434749	Not Available	1117	Open in IMG/M
3300031945\|Ga0310913_11054668	Not Available	569	Open in IMG/M
3300031947\|Ga0310909_10714888	Not Available	832	Open in IMG/M
3300031954\|Ga0306926_10233537	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → Pseudorhodoplanes sinuspersici	2281	Open in IMG/M
3300031954\|Ga0306926_11544308	Not Available	764	Open in IMG/M
3300031962\|Ga0307479_11284481	Not Available	693	Open in IMG/M
3300032001\|Ga0306922_11794674	Not Available	604	Open in IMG/M
3300032076\|Ga0306924_11394723	Not Available	748	Open in IMG/M
3300032180\|Ga0307471_101498709	Not Available	833	Open in IMG/M
3300032261\|Ga0306920_100979055	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1233	Open in IMG/M
3300032892\|Ga0335081_10743456	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1182	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.34%
Host-Associated	Host-Associated	3.66%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.93%
Aquatic	Environmental → Aquatic	13.41%
Plants	Host-Associated → Plants	3.66%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	82.93%
Freshwater	Environmental → Aquatic → Freshwater	10.37%
Sediment	Environmental → Aquatic → Sediment	3.05%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.44%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.22%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	55.49%
Loam	Environmental → Terrestrial → Soil → Loam	21.95%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	10.37%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.49%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.05%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.44%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.22%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	28.05%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.29%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	15.24%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	10.37%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.71%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.49%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.05%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.05%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.44%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	1.22%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.22%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	17.07%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.02%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	13.41%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	10.37%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.54%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.27%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.88%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.88%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.05%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.05%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.05%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.44%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.44%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.83%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.22%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	1.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.61%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.61%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.61%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000816	Forest soil microbial communities from Amazon forest - 2010 replicate II A10	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017993	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018029	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP06_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A1DRAFT_100024303	3300000597	Forest Soil	MWAAADGLPAKKRSIFLERIVAWLQFRDGRVIDRDLDNAVRLALRGLIHESAA*
AF_2010_repII_A10DRAFT_10205992	3300000816	Forest Soil	MFALSDSQLRTIWNAADGLPAEKRGIFLERIVAWLRFRGGRFIDRDLDDAVRLALRGLVHESAA*
JGI12627J18819_101316702	3300001867	Forest Soil	MFALSDSQLWTIWNAADGLPAEKRSVFLERIVAWLQFRGGRFIDHDFDDAVRLALRGLIQESAA*
JGIcombinedJ51221_101450381	3300003505	Forest Soil	MFALSDSQLQTIWNAADGLPAKKRGVFLARIVAWLQFRGGRFIDRDFDDAVRLALR
JGIcombinedJ51221_101561631	3300003505	Forest Soil	MFALSDSQLRTIWNAADGLPANKRGVFLERIVAWLQFRGGRFIDRDFDDAVRLALRGLIHESAA*
Ga0062595_1003082752	3300004479	Soil	MFALSDSQLRTIWNAAYGLPAKHRGVFLDRIVAWLKFRGGRFSERDLDDAVRLALRGLVQESAA*
Ga0066395_100506762	3300004633	Tropical Forest Soil	MIALTDSQLRTIWNAADGLPVTKRGVFLERIVAWLQFRDGRFIDRDLDDAVRLALRGLIHESAA*
Ga0066684_103984062	3300005179	Soil	MFALSDSQLRTIWNAAHGLPAEKRGIYLERIVAWLKFRGGRFIDRDLDDVVRLALRGLIHESAD*
Ga0066675_111666332	3300005187	Soil	MFALSDSQLRTIWNAAHGLPAEKRGIYLERIVAWLKFRGGRFIDRDLDDAVRLALRGLVHKSAA*
Ga0066388_1004914713	3300005332	Tropical Forest Soil	MFALSDSQLRTIWNAADGLPPTKRGVFLERIVAWLQFRGGRFIERDFDDAVRLALRGLIQESAA*
Ga0066388_1007914402	3300005332	Tropical Forest Soil	MFALSDSQLRTIWNAADGLPAEKRGIFLERIVAWLQFRAGRFIDRDLDDAVRLALRGLVHESAA*
Ga0066388_1013232081	3300005332	Tropical Forest Soil	MFALSDSQLRTIWNAADGLPAEKRGIYLERIVARLNFRGGRFIDRDLDDAVRLALRGSIEESAA*
Ga0066388_1031614162	3300005332	Tropical Forest Soil	MFALSDSQLRTIWNAADGLQAEKRGIFLERIVAWLQFRGGRFIDRDFDDAVRLARRGLVHESAA*
Ga0066388_1035008551	3300005332	Tropical Forest Soil	MFALPDSQLRTIWNAANGLPAGKRGVFLERIVAWLRFRGGRFVDRDLDDAVRLALRGLIQESAA*
Ga0066388_1035549891	3300005332	Tropical Forest Soil	MFALSDSQLRTIWNAANGLPAKNRGVFLERIVAWLQFRSGRFIDRDLDDAVRLAL
Ga0066388_1043975511	3300005332	Tropical Forest Soil	MFALSDSQLRNIWNAASGLPVEKRGIFLERIVAWLQFRGGRFIDRDLDDAVRLALRGSIQESAA*
Ga0066388_1046913171	3300005332	Tropical Forest Soil	MFALSDSQLRTIWNAAYGLPAKNRGIFLERIVAWLQFRGGRFIDRDLDDAVRLALRGLIQESAA*
Ga0066388_1053384292	3300005332	Tropical Forest Soil	MLALSDSQVRAIRAAADGLPAEKRGIFLERIVAWLQFRGGRFIERDLDDAVRLALRGLVHESAA*
Ga0066388_1058679031	3300005332	Tropical Forest Soil	MFALSDSQLRTIWNAADGLPAKKRGVFLERIIAWLQFRGGRFIDRDFDDAVRLAMRGLIQDSAA*
Ga0066388_1061410921	3300005332	Tropical Forest Soil	RMFALSDSQLRTIWNAADGLPATKRGVFLGRIVAWLQFRGGRFIDRDFDDAVRLALRGLIQESAA*
Ga0066388_1075215742	3300005332	Tropical Forest Soil	MFALSDSQLRTIWNAADTLPAKKRGVFLERIVAWLQFRGGRFIDRDLDDAVRLALRGLIHGSAA*
Ga0008090_142015931	3300005363	Tropical Rainforest Soil	MFALSDSQLRTIWDAADGLPAEKRGIYLERIVAWLLFRNGRFISRDLDDAVRLALRGLVHQSAA*
Ga0008090_158108571	3300005363	Tropical Rainforest Soil	MFALSDSQLRTIWNAADGLPAEKRGIFLERIVAWLQFRGGRFIDRDLDDAVRLALRGLVHQSAA*
Ga0070714_1006238101	3300005435	Agricultural Soil	MTAMLALSDSQFRTIWNAVDGLSAKKRGIYLERIVAWLQFRDGRFIDRDLDDAVRLGLRGLIHESAA*
Ga0070714_1006972531	3300005435	Agricultural Soil	MFALSDSQLRTIWNAAYGLPAKNRGVFLDRIVAWLKFRGGRFSERDLDDAVRLALRGLVQESAA*
Ga0070714_1022483041	3300005435	Agricultural Soil	MFALSDSQLRAIWNAAAGLPAIKRGVFIERIVAWLKFRGGRFIDRDLDDAVRLALRGLIQEKSAT*
Ga0070713_1004055472	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MFALSDSRLRTVWNAADGLPAEKRGIFLERMVAWLQFRGGRFIDRDFDDAVRLALRGLSHEAAA*
Ga0070713_1023893891	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MFALSDSQLRTVWNAADRLPAEKRGIFLERMVAWLRFRDGRFIDRDLDDAVRLGLRGLIHESAA*
Ga0070710_112802201	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	RTIWNAADGLPAKKRGVFLERIVAWLQFRGGRFIERDFDDAVRLALRGLIHESAA*
Ga0066670_105519192	3300005560	Soil	MFALSDSQLRTIWNAAHGLPAEKRGIYLERIVAWLKFRGGRFIDRDLDDAVRFALRGLIHESAA*
Ga0066654_106470252	3300005587	Soil	LTSAVLAGPWPHVALSDSQLRTIWNAAHGLPAEKRGIYLERIVAWLKFRGGRFIDRDLDDAVRLALRGLVHKSAA*
Ga0066903_1005232762	3300005764	Tropical Forest Soil	MFALSDSQLRAIWNAADGLPAEKRGIFLERIVAWLQFRDGRFIDRDLDDAVRLALRGLIHQSAA*
Ga0066903_1006946352	3300005764	Tropical Forest Soil	MFALSDSQLRTIWDAADSLPAKKRDIFLERIVAWLQFRGGRFIDRDFDDAVRLALRGLILESAA*
Ga0066903_1008413001	3300005764	Tropical Forest Soil	MFALSDSQLRNIWNAASGLPVEKRGIFLERMVAWLQFRGGRFIDRDLDDAVRLALRGLIQESAA*
Ga0066903_1008436702	3300005764	Tropical Forest Soil	MFALSDSQLRNIWNTADGLPAEKRGIFLERIVAWLQFRDGRFIDRDFNDAVRLALRGLVHESAA*
Ga0066903_1025612171	3300005764	Tropical Forest Soil	MYAVSDSQLRTIWNAADGLPAEKRGIFLERIVAWLQFRSGRFIDRDLDDAVRLALRGLVHESAA*
Ga0066903_1056755272	3300005764	Tropical Forest Soil	MFALSDSQLRTIWNAADGLPVGKRGVFLERIVAWLQFRGGRFIDRDLDDAVRLALRGLVHESAA*
Ga0066903_1057054103	3300005764	Tropical Forest Soil	MFALSDSQLRTIWNAAEGLPAEKRSVFLERIVAWLQFRGGRFIDRDLDDAVRLALRGLVHESAA*
Ga0066903_1082463632	3300005764	Tropical Forest Soil	MFALSDSQLRSIWNAANGLPAKKRGIFLERIVAWLQFRDGRFIDRDFDDAVRLALRGLIHQSAA*
Ga0070717_121494581	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MFALSDSQLRTIWNAAYGLPAKNRGVFLDRIVAWLKFRGGRFSERDLDDAVRLALRGLVQESGLNSASTRR
Ga0066651_105431042	3300006031	Soil	MFALSDSQLRTIWNAAHGLPAEKRGIYLERIVAWLKFRGGRFIDRDLDDAVCLALRGLIHESAA*
Ga0075024_1009023362	3300006047	Watersheds	MFALSDSQLRTIWHAADGLPAQKRGVYLERMIAWLQFRGGRFIDRDLDDAVRLALRGLIHESAA*
Ga0075017_1005608241	3300006059	Watersheds	MFALSDSQLQTIWNAADGLPAKKRGVFLERIVAWLQFRGGRFIDRDFDDAVRLALRGLIH
Ga0075019_102486424	3300006086	Watersheds	MFALSDSQLQTIWNAADGLPAKKRGVFLERIVAWLQFRGGRFIDRDFDDAVRLALRGLIHESAA*
Ga0070712_1000680912	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MFALSDSQLQTIWNAADGLPAKKRGVFLERIVAWLQFRGGRFIERDFDDAVRLALRGLIHESAA*
Ga0079222_100291835	3300006755	Agricultural Soil	MFALSDSQLRTVWNAADGLPAEKRGIFLERMVAWLQFRGGRFIDRDFDDAVRLALRGLSHEAAA*
Ga0079222_102496252	3300006755	Agricultural Soil	MFALSDSQLQTIWNAADGLPANKRGVFLERIVAWLQFRGGRFIDRDFDDAVRLALRGLIHESAA*
Ga0079220_102647731	3300006806	Agricultural Soil	MFALSDSQLRTIWNAADGLPAEKRGVYLDRIVAWLKFRGGRFIDRDLDDAVRLALRGLIQESAA*
Ga0079220_114323091	3300006806	Agricultural Soil	MFALSDSQLRTIWNSADGLPAEKRGIYLQRIVAWLQFRGGRFIERDLDDAVRLALRGLIHESAA*
Ga0075426_101332635	3300006903	Populus Rhizosphere	RTIWNAAYGLPAKNRGVFLDRIVAWLKFRGGRFSERDLDDAVRLALRGLVQESAA*
Ga0075436_1014484211	3300006914	Populus Rhizosphere	MFALSDSQLRTIWNAAYGLPAKNRGVFLDRIVAWLKFRGGRFSERDLDDAVRLALRGLAQESAA*
Ga0079219_100617372	3300006954	Agricultural Soil	MFALSDSQLRTISNAADGLPAEKRGVYLDRIVAWLKFRGGRFIDRDLDDAVRLALRGLIQESAA*
Ga0126374_101567671	3300009792	Tropical Forest Soil	MFALSDSQLRTIWNAADGLPAERRGIFLERIVAWLRFRGGRFIDRDLDDAVRLALRGLVHESAA*
Ga0126374_106473132	3300009792	Tropical Forest Soil	MFALSDSQLRTIWNAADGLPATKRGVFLGRIVAWLQFRGGRFIDRDFDDAVRLALRGLIQESAA*
Ga0126384_122783981	3300010046	Tropical Forest Soil	MFALSDSQLRTIWNAADGLPLEKRGIYLERIVAWLKFRGGRFIDRDLDDAVRLALRGLIHESAA*
Ga0126373_100789311	3300010048	Tropical Forest Soil	MFALSDSQLRNIWNAAGGLPVEKRGIFLERIVAWLQFRGGRFIDRDLDDAVRLA
Ga0126373_100850822	3300010048	Tropical Forest Soil	MFALSDSQLRTIWNAADGLPLEKRGIYLERIVAWLKFRGGRFIDRDLDDAVRLALRGLVHESAA*
Ga0126373_103693713	3300010048	Tropical Forest Soil	MFALSDSQLRTIWNAADGLPAEKRGIFLERIVAWLQFHAGRFIDRDLDDAVRLALRGLVHESAA*
Ga0126373_108357451	3300010048	Tropical Forest Soil	MYALTDSQLGTIWNAAYGLPAQHRGIFLERIVAWLQFRGGRFIDRDFDDAVRLARRGLVHESAA*
Ga0126373_108832661	3300010048	Tropical Forest Soil	PSLDHGRMFALSDSQLRTIWNAADGLPAEKRGIFLERIVAWLRFRGGRFIDRDLDDAVRLALRGLVHESAA*
Ga0126373_127371852	3300010048	Tropical Forest Soil	MFALSDSQLRAIWNAADGLPTKQRGIFLERIVAWLQFRDGRFIERDFDDAVRLALRGLIQESAA*
Ga0126373_129518851	3300010048	Tropical Forest Soil	MFALSDSQVRIIWNATDGLPAEKRGIFLERIVAWLQFRDGRFIDRDLDDAVRLALRGLVHQSAA*
Ga0126372_112606191	3300010360	Tropical Forest Soil	RMFALSDSQLRTIWNAADGLPLEKRGIYLERIVAWLKFRGGRFIDRDLDDAVRLALRGLVHESAA*
Ga0126378_114017301	3300010361	Tropical Forest Soil	MFALSDSQLRSIWNAANGVPREKRGIFLERIVAWLQFRDGRFIDRDLDDAVRLALRGLVHQSAA*
Ga0126378_127406351	3300010361	Tropical Forest Soil	MFALSDSQLRTIWNAADALPAEKRGIYLERIVAWLQFRGGRFIDRDFDDAVRLALRGLI
Ga0126378_128542141	3300010361	Tropical Forest Soil	MWAAADGLPAKKRSIFLERIVAWLQFRGGRFIDRDFDDAVRLARRGLVHESAA*
Ga0126379_104432361	3300010366	Tropical Forest Soil	MIALTDSQLRTIWNAADGLPVTKRGVFLERIVAWLQFRDGRFIDRDFDDARRGLVHESAA
Ga0126379_125078731	3300010366	Tropical Forest Soil	MVAFGDSQLRAVWATADGLPAKKRSIFLERIVAWLQFRDGRVIDRDLDNAVRLALRGLIHESAA*
Ga0126381_1013087891	3300010376	Tropical Forest Soil	MFALSDSQLRTIWNAADGLPAEKRGVYLERMAAWLQFRSGRFIDRDLDDAVRLALRD*
Ga0126383_122469951	3300010398	Tropical Forest Soil	MFALSDSQLRTIWNAADGLQAEKRGIFLERIVAWLQFRGGRFIDRDFDDAVRLALRGLVHESAA*
Ga0126369_114833741	3300012971	Tropical Forest Soil	MFALSDSQLRTIWNAADGLSAEKRGIFLERIVALLQFRGGRFIDRDLDDAVRLALRGLVHESAA*
Ga0134072_103652532	3300015357	Grasslands Soil	MFALSDSQLRTIWNAAHGLPAEKRGIYLERIVAWLKFRGGRFIDRDLDDVVRLALRGLIHESAA*
Ga0132258_101051835	3300015371	Arabidopsis Rhizosphere	MFALSDSQLRTIWNAADGLPVEKRGVFLERIVAWLQFRGGRFIDRDLDDAVRLARRGLTRSAA*
Ga0132258_103518026	3300015371	Arabidopsis Rhizosphere	MFALSDSQLRTIWNAADGLPAEKRGVYLDRIVAWLQFRDGRFIDRDLDDAVRLALRGLIHESAA*
Ga0132258_105977227	3300015371	Arabidopsis Rhizosphere	MFALSDSQLRAIWNAAAGLPAIKRGVFIERIVAWLKFSGGRFIDRDLDDAVRLALRGLIQEKSAT*
Ga0132255_1040690912	3300015374	Arabidopsis Rhizosphere	MFALSDSQLRTIWNAAGGLPAEKRGIYLERIVAWLRFRDGRFIDRDLDDAVRLALRGLIRESAA*
Ga0182036_116132462	3300016270	Soil	MFALSDSQLRTIWNATDGLPAKKRGIFLERIVAWLQFRGGRFIDRDFDDAVRVALRGLIHESAT
Ga0182033_104870902	3300016319	Soil	MFALSDSQLRTIWNAADGLPAKKRGIFLERVVAWLQFRGGRFIDRDFDDAVRVALRGLIHESAT
Ga0182035_103632251	3300016341	Soil	MFALSDSQLRTIWNATDGLPAKKRGIFLERIVAWLQFRGGRFIDRDFDDAVRLALRGLIQESAA
Ga0182035_116479292	3300016341	Soil	RTIWNATDGLPAKKRGISLERIVAWLQFHSGRFIDRDFDDAVRVALRGLIHESAT
Ga0182035_118204621	3300016341	Soil	MFALSDSQLRIIWNAADGLPAEKRGIFLERIVAWLQFRGGRFIDRDFHDAVRLALR
Ga0182034_106713461	3300016371	Soil	DALAVDSSRRHDHGRMIALTDSQLRTIWNAADGLPVTKRGVFLERIVAWLQFRDGRFIDRDLDDAVRLALRGLIHESAA
Ga0182040_113691251	3300016387	Soil	MIALTDWQLRTICNAADGLPVTKRGVFLERIVAWLQFRDGRFIDRDLDDAVRLALRGLIH
Ga0182037_117651061	3300016404	Soil	TIWNAADGLPVTKRGVFLERIVAWLQFRDGRFIDRDLDDAVRLALRGLIHESAA
Ga0182039_109227831	3300016422	Soil	MLALSDSQLRTIWNAADGLPAKKRGIFLERIVAWLQFRGGRFIDRDFDDAVRVALRGLIHESAT
Ga0182038_100490672	3300016445	Soil	MFALPDSQLRTIWNAADGLPAEKRGIFLERIVAWLQFRGGRFIDRDFHDAVRLALRGLIHESAA
Ga0187802_1000046414	3300017822	Freshwater Sediment	MFALSDSQLQAIWNAAHGLPAEKRGVYLERMIAWLQFRGGRFIDRDLDDAVRLALRGLIHESAA
Ga0187802_100058893	3300017822	Freshwater Sediment	MFALSDSQLRTIWNAAHGLPAEKRGVYLERMTAWLQFRGGRFIDRDLDDAVRLALWGLIHESAA
Ga0187806_11445312	3300017928	Freshwater Sediment	MFALSDSQLRTIWNAAHGLPAEKRGIYLERMIAWLQFRGGRFIDRDLDDAVRLALRGLIHESAA
Ga0187814_100402223	3300017932	Freshwater Sediment	SDSQLQAIWNAAHGLPAEKRGVYLERMTAWLQFRGGRFIDRDLDDAVRLALWGLIHESAA
Ga0187801_100737881	3300017933	Freshwater Sediment	DHGHMFALSDSQLRTIWTTADGLPAERRGVFLERIVAWLQFRGGRFIDRDLDDAVRLALRGLIQESAA
Ga0187809_100246405	3300017937	Freshwater Sediment	WNAAHGLPAEKRGVYLERMTAWLQFRGGRFIDRDLDDAVRLALRGLIHESAA
Ga0187809_100632281	3300017937	Freshwater Sediment	WNAAHGLPAEKRGVYLERMTAWLQFRGGRFIDRDLDDAVRLALWGLIHESAA
Ga0187808_102608012	3300017942	Freshwater Sediment	MFALSDSQLQAIWNAAHGLPAEKRGVYLERMTAWLQFRGGRFIDRDLDDAVRLALRGLIHESAA
Ga0187817_100891632	3300017955	Freshwater Sediment	MFALSDSQLRTIWNAAHGLPAEKRGVYLERMIAWLQFRGGRFIDRDLDDAVRLALRGLIHESAA
Ga0187779_105568022	3300017959	Tropical Peatland	SRRQDHGHMYALSDSQIRTIWNAAYGLPAENRGIFLERIVAWLQFRGGRFIDRDLDDAVRLALRGLIQESAA
Ga0187778_104746832	3300017961	Tropical Peatland	MYALSDSQLRTIWNAAYSLPAENRGIFLERIVAWLQFRSGRFIDRDLDDAVSLARRGLIQESAA
Ga0187780_103231972	3300017973	Tropical Peatland	MYALSDSQLRTIWNAAYSLPAENRGIFLERIVAWLQFRSGRFIDRDLDDAVRLALRGLIQETAA
Ga0187777_111194741	3300017974	Tropical Peatland	MFALSDSQLRAIWNAADGLPAKNRGIFLERIVAWLQFRSGRFIDRDLDDAVRLALRGLIQESAA
Ga0187777_112341981	3300017974	Tropical Peatland	WNAAYSLPAENRGIFLERIVAWLQFRSGRFIDRDLDDAVSLARRGLIQESAA
Ga0187823_100083984	3300017993	Freshwater Sediment	MFALSDSQLQAIWNVAHGLPAEKRGIYLERMIAWLQFRGGRFIDRDLDDAVRLALRGLIHESAA
Ga0187823_101790652	3300017993	Freshwater Sediment	MVVMLALSDSQLRTIWNTADGLPAEKRGIYLERIVAWLQFRDGRFIDRDLDDAVRLALRGLIHESAA
Ga0187822_100305032	3300017994	Freshwater Sediment	MLALSDSQLRTIWNAADGLPAEKRGVFLERIVAWLQFRGGRFIDRDLDDAVRLALWGLIHESAA
Ga0187816_100193993	3300017995	Freshwater Sediment	MFALSDSQLRTIWNAAHGLPAEKRGVYLERMTAWLQFRGGRFIDRDLDDAVRLAL
Ga0187816_100544181	3300017995	Freshwater Sediment	LSDSQLRTIWNAAHGLPAEKRGVYLEGMIAWLQFRGGRFIDRDLDDAVRLALWGLIHESA
Ga0187815_100213873	3300018001	Freshwater Sediment	MFALSDSQLRTIWNAAHGLPAEKRGVYLEGMIAWLQFRGGRFIDRDLDDAVRLALRGLIHESAA
Ga0187815_100283586	3300018001	Freshwater Sediment	MFALSDSQLQAIWNAAHGLPAEKRGIYLERMIAWLQFRGGRFIDRDLDDAVRLALRGLIHESAA
Ga0187805_102292112	3300018007	Freshwater Sediment	MFALSDSQLRTIWNAAHGLPAEKRGVYLERMTAWLQFRGGRFIDRDLDDAVRLALRGLIHESAA
Ga0187787_104151221	3300018029	Tropical Peatland	MFALSDSQLRTIWNAADGLSAEKRGIFLERIDAWLQFRGGRFIDRDLDAAVRLALRGLIHESAA
Ga0187765_102026302	3300018060	Tropical Peatland	MFALSDSQLRNIWSAADGLPAEKRGIYLERIVAWLQFRGGRFIDRDLDDAVRLALRGLVYESAA
Ga0187773_108032152	3300018064	Tropical Peatland	FALSDSQLRTIWHAADGLPAKGRGIYLERMIAWLQFRGGRFIDRDLNAAVRLALRGLIHESAA
Ga0210407_113326891	3300020579	Soil	MFALSDSQLQTIWNAADGLPAKKRGVFLARIVAWLQFRGGRFIDRDFDDAVRLALRGLIHESAA
Ga0210403_113729601	3300020580	Soil	MFALSDSQLRTIWNAADGLPANKRGVFLERIVAWLQFRGGRFIDRDFDDAVRLALRGLIHESAA
Ga0210399_101666013	3300020581	Soil	MFALSDSQLQTIWNAADGLPAKKRGVFLERIVAWLQFRGGRFIDRDFDDAVRLALRGLIHESAA
Ga0210399_108151331	3300020581	Soil	MFALSDSQLRTIWNAADGLPANKRGVFLERIVAWLQFRGGRFIDRDFDDAVRL
Ga0210405_102519073	3300021171	Soil	MFALSDSQLRTIWNAADGLPAKKRGVFLARIVAWLQFRGGRFIDRDFDDAVRLALRGLIHESAA
Ga0210383_108437662	3300021407	Soil	LDHGHMFALSDSQLQTIWNAADGLPAKKRGVFLERIVAWLQFRGGRFIDRDFDDAVRLALRGLIHESAA
Ga0126371_101098415	3300021560	Tropical Forest Soil	MFALSDSQLRTIWDAADSLPAKKRDIFLERIVAWLQFRGGRFIDRDFDDAVRLALRGLILESAA
Ga0126371_102427103	3300021560	Tropical Forest Soil	MFALSDSQLRNIWNAAGGLPVEKRGIFLERIVAWLQFRGGRFIDRDLDDAVRLALRGLIQESAA
Ga0126371_103308981	3300021560	Tropical Forest Soil	MIALTDSQLRTIWNAADGLPVTKRGVFLERIVAWLQFRDGRFIDRDLDDAVRLALRGLIHESAA
Ga0126371_104326692	3300021560	Tropical Forest Soil	MFALSDSQLRTIWDAADGLPAEKRGIYLERIVAWLLFRNGRFISRDLDDAVRLALRGLVHQSAA
Ga0126371_107114051	3300021560	Tropical Forest Soil	MFALSDSQLRTIWNAADGLPAEKRGIFLERIVAWLQFRAGRFIDRDLDDAVRLALRGLVHESAA
Ga0126371_113618502	3300021560	Tropical Forest Soil	MWAAADGLPAKKRSIFLERIVAWLQFRDGRVIDRDLDNAVRLALRGLIHESAA
Ga0126371_113910531	3300021560	Tropical Forest Soil	MFALSDSQLRTIWNAADGLQAEKRGIFLERIVAWLQFRGGRFIDRDFDDAVRLARRGLVHESAA
Ga0126371_123747411	3300021560	Tropical Forest Soil	MFALSDSQLRTIWNAADALPAEKRGIYLERIVAWLQFRGGRFIDRDFDDAVRLALRGLIHETAA
Ga0126371_125027841	3300021560	Tropical Forest Soil	MFALSDSQLRTIWNAADGLPAKNRGIFLERIVAWLQFRGDRFIDRDLDDAVRLALRGLIHESAA
Ga0207693_100645803	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MFALSDSQLQTIWNAADGLPAKKRGVFLERIVAWLQFRGGRFIERDFDDAVRLALRGLIHESAA
Ga0207700_107749881	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	FRTIWNAAGGLPPIKRGVFLERMVAWLQFRGGRFIDRDLDDAVRLALRGLIHESAA
Ga0207700_113804672	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MFALSDSQLRTVWNAADRLPAEKRGIFLERMVAWLQFRGGRFIDRDFDDAVRLALRGLSHEAAA
Ga0209073_102133331	3300027765	Agricultural Soil	MFALSDSQLRTIWNAADGLPAEKRGVYLDRIVAWLKFRGGRFIDRDLDDAVRLALRGLIQESAA
Ga0209073_102968522	3300027765	Agricultural Soil	MFALSDSQLRTVWNAADGLPAEKRGIFLERMVAWLQFRGGRFIDRDFDDAVRLALRGLSHEAAA
Ga0209465_101760302	3300027874	Tropical Forest Soil	MFALSDSQLRTIWNAADGLPLEKRGIYLERIVAWLKFRSGRFIDRDLDDAVRLALRGLVHESAA
Ga0209067_102656811	3300027898	Watersheds	DHGRMFALSDSQLQTIWNAADGLPAKKRGVFLERIVAWLQFRGGRFIDRDFDDAVRLALRGLIHESAA
Ga0209069_108942961	3300027915	Watersheds	MFALSDSQLRTIWHAADGLPAQKRGVYLERMIAWLQFRGGRFIDRDLDDAVRLALRGLIHESAA
Ga0170820_119734742	3300031446	Forest Soil	MFALSDSQLRTIWHAADGLPAKERGVYLERMIAWLQFRGGRFIDRDLDDAVRLALRD
Ga0170818_1100813822	3300031474	Forest Soil	MFALSDSQLRTIWHAADGLPAKERGVYLERMIAWLQFRGGRFIDRDLDDAVRLALRGLIHESAA
Ga0318541_107160921	3300031545	Soil	MATCLRCLIRSFRTIWNAADGLPAEKRGIFLERIVAWLQFRGGRFIDRDFHDAVRLALRGLIHESAA
Ga0318573_104110411	3300031564	Soil	SQLRAVWTAAEGLPVQKRGVFLERVVARLQLCGSRFTDVDLDDAVRLALRGLIQNSAA
Ga0310915_110522931	3300031573	Soil	MIALTDSQLRTIWNAADGLPVTKRGVFLERIVAWLQFRDGRFIDRDLDDAVRLA
Ga0310813_117851532	3300031716	Soil	MFALSDSQPRTVWNAADRLPAEKRGIFLERMVAWLRFRDGRFIDRDLDDAVRLGL
Ga0306917_109126701	3300031719	Soil	MFALSDSQLRTIWNAADGLPAEKRGIFLERIVAWLQFRGGRFIDRDFHDAMRLALRGLIHESAA
Ga0306918_111623171	3300031744	Soil	MFALSDSQLRTIWNATDGLPAKKRGIFLERIVAWLQFRSGRFIDRDFDDAVRVALRGLIHESAT
Ga0306918_112005221	3300031744	Soil	MFALSDSQLRTVWNAADGLPAEKRGIFLERIVAWLRFRGGRFIDRDLDDAVRLALRGLVHESAA
Ga0318494_102673002	3300031751	Soil	MFALSDSQLRTIWNAADGLPAKKRGIFLERIVAWLQFRGGRFIDRDFHDAVRLALRGLIHESAA
Ga0307477_103669021	3300031753	Hardwood Forest Soil	MFALSDSQLRAIWNAAAGLPAIKRGVFIERIVAWLKFRGGRFVDRDLDDAVRLAQRGLIQEKPAA
Ga0307475_102452692	3300031754	Hardwood Forest Soil	MFALSDSQLRAIWNAAAGLPAIKRGVFIERIVAWLKFRGGRFIDRDLDDAVRLAQRGLIQEKPAA
Ga0307475_108078471	3300031754	Hardwood Forest Soil	MFALSDSQLRTIWNAVEGLPAEKRGIYLERILAWLQFRGGRFIDRDLDDAVRLALRGLIQESAA
Ga0306919_112887781	3300031879	Soil	MFALSDSQLRTIWDAADSLPAKKRGIFLERIVAWLQFRGGRFIDRDFDDAVRLALRGLILESAA
Ga0306919_114099521	3300031879	Soil	MFALSDSQLRTIWNAADGLPAKKRGIFLERIAWLQFRGGRFIDRDFDDAVRVALRGLIHESAT
Ga0318544_103479231	3300031880	Soil	MFALSDSQLRTIWNAADGLPAENRGIFLERIVAWLQFRGGRFIDRDFHDAVRLALRGLIHESAA
Ga0306925_105926803	3300031890	Soil	MFALSDSQLRTIWNAADGLPAEKRGIFLERIVAWLQFRGGRFIDRDFHDAVRLALRGLIHESAA
Ga0306925_116859501	3300031890	Soil	MFALSDSQLRTIWNATDGLPAKKRGIFLERIVAWLQFHSGRFIDRDFDDAVRVALRGLIHESAT
Ga0306921_110088281	3300031912	Soil	SDSQLRTIWNAADGLPAEKRGIFLERIVAWLQFRGGRFIDRDFHDAVRLALRGLIHESAA
Ga0310916_104347493	3300031942	Soil	ARPWHMFALSDSQLRTIWNAADGLPAEKRGIFLERIVAWLQFRGGRFIDRDFHDAVRLALRGLIHESAA
Ga0310913_110546681	3300031945	Soil	HMFALSDSQLRTIWKAVDGLPAKNRGIFLERIVAWLQFRGGRFIDRDLDDAVRLALRGLIHESAA
Ga0310909_107148883	3300031947	Soil	PPSSLDHGRMFALSDSQLRTVWNAADGLPAEKRGIFLERIVAWLRFRGGRFIDRDLDDAVRLALRGLVHESAA
Ga0306926_102335374	3300031954	Soil	MFALSDSQLRTIWNAADGLPAKKRGIFLERIVAWLQFRGGRFIDRDFDDAVRVALRGLIHESAT
Ga0306926_115443081	3300031954	Soil	MFALSDSQLRTVWNAADGLPAEKRGIFLERIVAWLQFRGGRFIDRDLDDAVRLALRGLVHESAA
Ga0307479_112844812	3300031962	Hardwood Forest Soil	MLALSDSQLRTIWNAAHGLPAEKRGIYLERMIAWLQFRGGRFIDRDLDDAVRLALRGLIHESAA
Ga0306922_117946742	3300032001	Soil	QLRTIWNAADGLPVTKRGVFLERIVAWLQFRDGRFIDRDLDDAVRLALRGLIHESAA
Ga0306924_113947231	3300032076	Soil	MFALSDSQLRTIWDAADSLPAKKRGIFLERIVSWLQFRGGRFIDRDFDDAVRLALRGLILESAA
Ga0307471_1014987092	3300032180	Hardwood Forest Soil	MFALSDSQLHTIWNAADGLPANKRGVFLERIVAWLQFRGGRFIERDFDDAVRLALRGLIHESAA
Ga0306920_1009790552	3300032261	Soil	MFALSDSQLRTIWKAVDGLPAKNRGIFLERIVAWLQFRGGRFIDRDFEDVVSLALWGLIQGSAA
Ga0335081_107434562	3300032892	Soil	MLALSDSQLRTIWNTADGLPAEKRGVFLERIIAWLEFRGGRFIDRDLDDAVRLALRGLIQESAA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F039256

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences