Metagenome / Metatranscriptome Family F039315

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F039315
Family Type	Metagenome / Metatranscriptome
Number of Sequences	164
Average Sequence Length	57 residues
Representative Sequence	MAALDKMSVTELEDLAAKLRHAIARNPENSRMEQVELEDVKQWIAIRQNRDSSESEP
Number of Associated Samples	113
Number of Associated Scaffolds	164

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	41.14 %
% of genes near scaffold ends (potentially truncated)	20.12 %
% of genes from short scaffolds (< 2000 bps)	82.32 %
Associated GOLD sequencing projects	104
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.69

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (70.732 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (40.244 % of family members)
Environment Ontology (ENVO)	Unclassified (43.293 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (40.244 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 55.29% β-sheet: 0.00% Coil/Unstructured: 44.71%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.69
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.69
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 164 Family Scaffolds
PF08808	RES	25.61
PF01381	HTH_3	8.54
PF09722	Xre_MbcA_ParS_C	4.27
PF13520	AA_permease_2	4.27
PF13560	HTH_31	3.66
PF11154	DUF2934	3.05
PF09828	Chrome_Resist	3.05
PF00011	HSP20	1.83
PF13620	CarboxypepD_reg	1.22
PF02321	OEP	1.22
PF00459	Inositol_P	1.22
PF08843	AbiEii	0.61
PF05402	PqqD	0.61
PF00196	GerE	0.61
PF13426	PAS_9	0.61
PF04055	Radical_SAM	0.61
PF00107	ADH_zinc_N	0.61
PF01636	APH	0.61
PF13090	PP_kinase_C	0.61
PF01740	STAS	0.61
PF03235	DUF262	0.61
PF13361	UvrD_C	0.61
PF14522	Cytochrome_C7	0.61
PF00004	AAA	0.61
PF13175	AAA_15	0.61
PF02517	Rce1-like	0.61
PF07676	PD40	0.61
PF00210	Ferritin	0.61
PF07638	Sigma70_ECF	0.61
PF04519	Bactofilin	0.61
PF01583	APS_kinase	0.61
PF09587	PGA_cap	0.61

COG ID	Name	Functional Category	% Frequency in 164 Family Scaffolds
COG5654	Predicted toxin component of a toxin-antitoxin system, contains RES domain	Defense mechanisms [V]	25.61
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	2.44
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	1.83
COG0529	Adenylylsulfate kinase or related kinase	Inorganic ion transport and metabolism [P]	0.61
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	0.61
COG1479	DNAse/DNA nickase specific for phosphorothioated or glycosylated phage DNA, GmrSD/DndB/SspE family, contains DUF262 and HNH nuclease domains	Defense mechanisms [V]	0.61
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.61
COG1664	Cytoskeletal protein CcmA, bactofilin family	Cytoskeleton [Z]	0.61
COG2253	Predicted nucleotidyltransferase component of viral defense system	Defense mechanisms [V]	0.61
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	0.61

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	71.34 %
Unclassified	root	N/A	28.66 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	71.34 %
Unclassified	root	N/A	28.66 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	70.73 %
Unclassified	root	N/A	28.66 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.66 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	20.12 %
Elusimicrobia	phylum	All Organisms → cellular organisms → Bacteria → Elusimicrobia	8.54 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.27 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.61 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.61 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.66 %
Elusimicrobia	class	All Organisms → cellular organisms → Bacteria → Elusimicrobia → Elusimicrobia	8.54 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	6.71 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.61 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.61 %
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	0.61 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.61 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.66 %
Elusimicrobia	class	All Organisms → cellular organisms → Bacteria → Elusimicrobia → Elusimicrobia	8.54 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.71 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.22 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.61 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	0.61 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.61 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.61 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.66 %
Elusimicrobia	class	All Organisms → cellular organisms → Bacteria → Elusimicrobia → Elusimicrobia	8.54 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.71 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.22 %
Nitrospiraceae	family	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	0.61 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.61 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.61 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.61 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.66 %
Elusimicrobia	class	All Organisms → cellular organisms → Bacteria → Elusimicrobia → Elusimicrobia	8.54 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.71 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.22 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.61 %
Nitrospira	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	0.61 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.61 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.61 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.61 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001867\|JGI12627J18819_10250934	All Organisms → cellular organisms → Bacteria	712	Open in IMG/M
3300002245\|JGIcombinedJ26739_100251745	All Organisms → cellular organisms → Bacteria → Acidobacteria	1654	Open in IMG/M
3300002558\|JGI25385J37094_10214022	Not Available	514	Open in IMG/M
3300005174\|Ga0066680_10007428	All Organisms → cellular organisms → Bacteria	5426	Open in IMG/M
3300005537\|Ga0070730_10924338	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300005541\|Ga0070733_11017162	Not Available	556	Open in IMG/M
3300005557\|Ga0066704_10445766	All Organisms → cellular organisms → Bacteria	856	Open in IMG/M
3300005559\|Ga0066700_10544212	Not Available	810	Open in IMG/M
3300005568\|Ga0066703_10558808	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300005602\|Ga0070762_10278342	All Organisms → cellular organisms → Bacteria	1048	Open in IMG/M
3300005602\|Ga0070762_11266939	Not Available	511	Open in IMG/M
3300005921\|Ga0070766_10706039	Not Available	683	Open in IMG/M
3300006172\|Ga0075018_10844973	Not Available	505	Open in IMG/M
3300006176\|Ga0070765_100681022	All Organisms → cellular organisms → Bacteria → Acidobacteria	971	Open in IMG/M
3300006176\|Ga0070765_101012667	All Organisms → cellular organisms → Bacteria	785	Open in IMG/M
3300006176\|Ga0070765_102299792	Not Available	502	Open in IMG/M
3300007255\|Ga0099791_10049956	All Organisms → cellular organisms → Bacteria	1872	Open in IMG/M
3300007258\|Ga0099793_10248400	All Organisms → cellular organisms → Bacteria	858	Open in IMG/M
3300009038\|Ga0099829_10218976	All Organisms → cellular organisms → Bacteria	1546	Open in IMG/M
3300009088\|Ga0099830_10449833	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1046	Open in IMG/M
3300009088\|Ga0099830_10767695	All Organisms → cellular organisms → Bacteria	795	Open in IMG/M
3300009088\|Ga0099830_11448564	All Organisms → cellular organisms → Bacteria → Elusimicrobia → Elusimicrobia	572	Open in IMG/M
3300009089\|Ga0099828_11823496	Not Available	534	Open in IMG/M
3300009090\|Ga0099827_10081099	All Organisms → cellular organisms → Bacteria	2533	Open in IMG/M
3300009090\|Ga0099827_11279429	All Organisms → cellular organisms → Bacteria → Proteobacteria	638	Open in IMG/M
3300009090\|Ga0099827_11485657	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300009143\|Ga0099792_10057317	All Organisms → cellular organisms → Bacteria	1920	Open in IMG/M
3300009143\|Ga0099792_10831077	Not Available	607	Open in IMG/M
3300009764\|Ga0116134_1351018	Not Available	506	Open in IMG/M
3300010379\|Ga0136449_101720701	All Organisms → cellular organisms → Bacteria → Acidobacteria	944	Open in IMG/M
3300011270\|Ga0137391_10006297	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9225	Open in IMG/M
3300011270\|Ga0137391_11139965	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	628	Open in IMG/M
3300011271\|Ga0137393_10179999	Not Available	1777	Open in IMG/M
3300011271\|Ga0137393_11160915	All Organisms → cellular organisms → Bacteria → Elusimicrobia → Elusimicrobia	656	Open in IMG/M
3300012096\|Ga0137389_10167393	All Organisms → cellular organisms → Bacteria	1811	Open in IMG/M
3300012096\|Ga0137389_10448150	All Organisms → cellular organisms → Bacteria → Elusimicrobia → Elusimicrobia	1105	Open in IMG/M
3300012199\|Ga0137383_10186221	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1521	Open in IMG/M
3300012199\|Ga0137383_10844432	All Organisms → cellular organisms → Bacteria → Proteobacteria	668	Open in IMG/M
3300012200\|Ga0137382_10119580	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1759	Open in IMG/M
3300012200\|Ga0137382_10142804	Not Available	1617	Open in IMG/M
3300012200\|Ga0137382_10244972	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1241	Open in IMG/M
3300012202\|Ga0137363_10419459	All Organisms → cellular organisms → Bacteria → Proteobacteria	1117	Open in IMG/M
3300012202\|Ga0137363_11802424	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300012203\|Ga0137399_11185436	Not Available	643	Open in IMG/M
3300012205\|Ga0137362_11060846	All Organisms → cellular organisms → Bacteria → Acidobacteria	689	Open in IMG/M
3300012206\|Ga0137380_10002979	All Organisms → cellular organisms → Bacteria	14584	Open in IMG/M
3300012206\|Ga0137380_10435235	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1161	Open in IMG/M
3300012207\|Ga0137381_10017231	All Organisms → cellular organisms → Bacteria	5657	Open in IMG/M
3300012207\|Ga0137381_10114289	All Organisms → cellular organisms → Bacteria → Acidobacteria	2300	Open in IMG/M
3300012209\|Ga0137379_10082519	All Organisms → cellular organisms → Bacteria	3092	Open in IMG/M
3300012359\|Ga0137385_10302568	Not Available	1376	Open in IMG/M
3300012361\|Ga0137360_11072819	All Organisms → cellular organisms → Bacteria	695	Open in IMG/M
3300012362\|Ga0137361_10766294	All Organisms → cellular organisms → Bacteria → Acidobacteria	879	Open in IMG/M
3300012363\|Ga0137390_10002375	All Organisms → cellular organisms → Bacteria	14868	Open in IMG/M
3300012363\|Ga0137390_10745801	All Organisms → cellular organisms → Bacteria	939	Open in IMG/M
3300012363\|Ga0137390_11600818	All Organisms → cellular organisms → Bacteria → Elusimicrobia → Elusimicrobia	589	Open in IMG/M
3300012683\|Ga0137398_11084737	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300012685\|Ga0137397_10219218	All Organisms → cellular organisms → Bacteria	1416	Open in IMG/M
3300012917\|Ga0137395_10068204	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2289	Open in IMG/M
3300012917\|Ga0137395_10138758	All Organisms → cellular organisms → Bacteria → Proteobacteria	1655	Open in IMG/M
3300012917\|Ga0137395_10167720	Not Available	1512	Open in IMG/M
3300012917\|Ga0137395_10898915	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300012917\|Ga0137395_10993000	All Organisms → cellular organisms → Bacteria → Elusimicrobia → Elusimicrobia	602	Open in IMG/M
3300012922\|Ga0137394_10509412	Not Available	1022	Open in IMG/M
3300012924\|Ga0137413_10656950	All Organisms → cellular organisms → Bacteria → Acidobacteria	791	Open in IMG/M
3300012927\|Ga0137416_10841489	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	813	Open in IMG/M
3300012944\|Ga0137410_11740672	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	549	Open in IMG/M
3300014155\|Ga0181524_10231676	All Organisms → cellular organisms → Bacteria	880	Open in IMG/M
3300014156\|Ga0181518_10401431	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	663	Open in IMG/M
3300014159\|Ga0181530_10364017	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	743	Open in IMG/M
3300014164\|Ga0181532_10742950	Not Available	528	Open in IMG/M
3300014200\|Ga0181526_10688560	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300014495\|Ga0182015_10059010	All Organisms → cellular organisms → Bacteria	2767	Open in IMG/M
3300014495\|Ga0182015_10068866	All Organisms → cellular organisms → Bacteria	2517	Open in IMG/M
3300014501\|Ga0182024_10236774	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2460	Open in IMG/M
3300014501\|Ga0182024_10410223	All Organisms → cellular organisms → Bacteria	1749	Open in IMG/M
3300014501\|Ga0182024_10630129	All Organisms → cellular organisms → Bacteria	1337	Open in IMG/M
3300014501\|Ga0182024_10735935	All Organisms → cellular organisms → Bacteria	1212	Open in IMG/M
3300014838\|Ga0182030_11264387	Not Available	625	Open in IMG/M
3300015054\|Ga0137420_1096296	Not Available	1559	Open in IMG/M
3300015054\|Ga0137420_1237499	All Organisms → cellular organisms → Bacteria	1903	Open in IMG/M
3300015054\|Ga0137420_1482568	All Organisms → cellular organisms → Bacteria	1783	Open in IMG/M
3300015264\|Ga0137403_11026295	All Organisms → cellular organisms → Bacteria → Acidobacteria	671	Open in IMG/M
3300017821\|Ga0187812_1000457	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14403	Open in IMG/M
3300017822\|Ga0187802_10073559	Not Available	1269	Open in IMG/M
3300017823\|Ga0187818_10283570	All Organisms → cellular organisms → Bacteria → Elusimicrobia → Elusimicrobia	726	Open in IMG/M
3300017823\|Ga0187818_10371266	Not Available	633	Open in IMG/M
3300017927\|Ga0187824_10163913	Not Available	742	Open in IMG/M
3300017930\|Ga0187825_10183586	All Organisms → cellular organisms → Bacteria → Acidobacteria	748	Open in IMG/M
3300017933\|Ga0187801_10059438	All Organisms → cellular organisms → Bacteria → Elusimicrobia → Elusimicrobia	1402	Open in IMG/M
3300017934\|Ga0187803_10000505	All Organisms → cellular organisms → Bacteria → Acidobacteria	15583	Open in IMG/M
3300017934\|Ga0187803_10035037	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1994	Open in IMG/M
3300017934\|Ga0187803_10339645	Not Available	603	Open in IMG/M
3300017936\|Ga0187821_10368435	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300017943\|Ga0187819_10172802	All Organisms → cellular organisms → Bacteria	1282	Open in IMG/M
3300017943\|Ga0187819_10319400	All Organisms → cellular organisms → Archaea	900	Open in IMG/M
3300017943\|Ga0187819_10592563	Not Available	628	Open in IMG/M
3300017955\|Ga0187817_10183675	All Organisms → cellular organisms → Bacteria → Acidobacteria	1332	Open in IMG/M
3300017955\|Ga0187817_10331337	Not Available	970	Open in IMG/M
3300017955\|Ga0187817_11091454	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300017995\|Ga0187816_10390443	Not Available	618	Open in IMG/M
3300018006\|Ga0187804_10198490	Not Available	857	Open in IMG/M
3300018006\|Ga0187804_10225274	Not Available	805	Open in IMG/M
3300018006\|Ga0187804_10255734	Not Available	757	Open in IMG/M
3300018006\|Ga0187804_10304414	All Organisms → cellular organisms → Bacteria → Elusimicrobia → Elusimicrobia	695	Open in IMG/M
3300018007\|Ga0187805_10235737	All Organisms → cellular organisms → Bacteria	838	Open in IMG/M
3300018012\|Ga0187810_10132276	Not Available	995	Open in IMG/M
3300018012\|Ga0187810_10368275	Not Available	601	Open in IMG/M
3300018012\|Ga0187810_10375120	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300018017\|Ga0187872_10500159	Not Available	504	Open in IMG/M
3300018022\|Ga0187864_10095769	All Organisms → cellular organisms → Bacteria	1553	Open in IMG/M
3300018035\|Ga0187875_10265464	All Organisms → cellular organisms → Bacteria	934	Open in IMG/M
3300018468\|Ga0066662_10296790	All Organisms → cellular organisms → Bacteria	1355	Open in IMG/M
3300019082\|Ga0187852_1391678	All Organisms → cellular organisms → Bacteria → Elusimicrobia → Elusimicrobia	543	Open in IMG/M
3300020199\|Ga0179592_10353662	All Organisms → cellular organisms → Bacteria → Acidobacteria	646	Open in IMG/M
3300020581\|Ga0210399_11344632	All Organisms → cellular organisms → Bacteria → Acidobacteria	561	Open in IMG/M
3300021086\|Ga0179596_10444892	Not Available	655	Open in IMG/M
3300021170\|Ga0210400_10823367	All Organisms → cellular organisms → Bacteria → Elusimicrobia → Elusimicrobia	760	Open in IMG/M
3300021178\|Ga0210408_10162520	Not Available	1771	Open in IMG/M
3300021178\|Ga0210408_10926048	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	677	Open in IMG/M
3300021479\|Ga0210410_10000196	All Organisms → cellular organisms → Bacteria	85335	Open in IMG/M
3300021559\|Ga0210409_10009745	All Organisms → cellular organisms → Bacteria → Acidobacteria	9716	Open in IMG/M
3300021559\|Ga0210409_10109392	All Organisms → cellular organisms → Bacteria → Acidobacteria	2544	Open in IMG/M
3300024330\|Ga0137417_1368159	All Organisms → cellular organisms → Bacteria → Elusimicrobia → Elusimicrobia	1754	Open in IMG/M
3300026318\|Ga0209471_1084024	All Organisms → cellular organisms → Bacteria	1401	Open in IMG/M
3300026333\|Ga0209158_1011511	All Organisms → cellular organisms → Bacteria	4311	Open in IMG/M
3300026361\|Ga0257176_1029190	All Organisms → cellular organisms → Bacteria	826	Open in IMG/M
3300026361\|Ga0257176_1034706	All Organisms → cellular organisms → Bacteria → Acidobacteria	769	Open in IMG/M
3300026376\|Ga0257167_1010625	All Organisms → cellular organisms → Bacteria	1223	Open in IMG/M
3300026499\|Ga0257181_1063228	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300026529\|Ga0209806_1235654	Not Available	619	Open in IMG/M
3300027565\|Ga0209219_1166978	All Organisms → cellular organisms → Bacteria → Elusimicrobia → Elusimicrobia	524	Open in IMG/M
3300027643\|Ga0209076_1101089	All Organisms → cellular organisms → Bacteria → Acidobacteria	818	Open in IMG/M
3300027669\|Ga0208981_1029686	All Organisms → cellular organisms → Bacteria	1397	Open in IMG/M
3300027857\|Ga0209166_10346154	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	777	Open in IMG/M
3300027862\|Ga0209701_10025614	All Organisms → cellular organisms → Bacteria	3835	Open in IMG/M
3300027862\|Ga0209701_10117123	All Organisms → cellular organisms → Bacteria	1652	Open in IMG/M
3300027875\|Ga0209283_10615605	Not Available	687	Open in IMG/M
3300027882\|Ga0209590_10183180	All Organisms → cellular organisms → Bacteria	1317	Open in IMG/M
3300027905\|Ga0209415_10715829	Not Available	714	Open in IMG/M
3300028047\|Ga0209526_10261760	Not Available	1180	Open in IMG/M
3300028047\|Ga0209526_10392371	All Organisms → cellular organisms → Bacteria → Elusimicrobia → Elusimicrobia	923	Open in IMG/M
3300028536\|Ga0137415_10019603	All Organisms → cellular organisms → Bacteria → Proteobacteria	6708	Open in IMG/M
3300028906\|Ga0308309_11291071	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300031670\|Ga0307374_10054982	All Organisms → cellular organisms → Bacteria	4041	Open in IMG/M
3300031672\|Ga0307373_10184858	All Organisms → cellular organisms → Bacteria	1530	Open in IMG/M
3300031672\|Ga0307373_10299326	All Organisms → cellular organisms → Bacteria	1024	Open in IMG/M
3300032180\|Ga0307471_101820203	All Organisms → cellular organisms → Bacteria	760	Open in IMG/M
3300032770\|Ga0335085_10000126	All Organisms → cellular organisms → Bacteria	244261	Open in IMG/M
3300032770\|Ga0335085_11083924	All Organisms → cellular organisms → Bacteria → Acidobacteria	859	Open in IMG/M
3300032770\|Ga0335085_11589834	Not Available	677	Open in IMG/M
3300032892\|Ga0335081_11188401	All Organisms → cellular organisms → Bacteria	871	Open in IMG/M
3300032893\|Ga0335069_11712593	Not Available	670	Open in IMG/M
3300032898\|Ga0335072_10791265	All Organisms → cellular organisms → Bacteria → Elusimicrobia → Elusimicrobia	909	Open in IMG/M
3300032954\|Ga0335083_10539881	All Organisms → cellular organisms → Bacteria → Acidobacteria	970	Open in IMG/M
3300033158\|Ga0335077_10286686	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	1808	Open in IMG/M
3300033402\|Ga0326728_10000727	All Organisms → cellular organisms → Bacteria	124945	Open in IMG/M
3300034091\|Ga0326724_0205118	Not Available	1166	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	77.44%
Aquatic	Environmental → Aquatic	22.56%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	76.22%
Freshwater	Environmental → Aquatic → Freshwater	21.95%
Peat	Environmental → Terrestrial → Peat	1.22%
Sediment	Environmental → Aquatic → Sediment	0.61%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	56.71%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	21.95%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.15%
Loam	Environmental → Terrestrial → Soil → Loam	8.54%
Clay	Environmental → Terrestrial → Soil → Clay	1.83%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.22%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.61%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	43.29%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	15.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.54%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.93%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	5.49%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.49%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	4.27%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.88%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	1.83%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.22%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.61%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.61%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	40.24%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	15.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.32%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.27%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.27%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.27%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.88%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	3.05%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.44%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	2.44%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.83%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	1.83%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.22%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.22%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	1.22%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.22%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.61%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.61%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.61%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.61%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014155	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaG	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017821	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018012	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5	Environmental	Open in IMG/M
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental	Open in IMG/M
3300018022	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_40	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019082	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_40	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026361	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-B	Environmental	Open in IMG/M
3300026376	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-02-B	Environmental	Open in IMG/M
3300026499	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-B	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300027565	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027669	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027678	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031670	Soil microbial communities from Risofladan, Vaasa, Finland - OX-3	Environmental	Open in IMG/M
3300031672	Soil microbial communities from Risofladan, Vaasa, Finland - OX-2	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300034091	Peat soil microbial communities from McLean, Ithaca, NY, United States - MB00N	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12627J18819_102509341	3300001867	Forest Soil	MTALNKMSFAELEDVAEVRHAIARNPANSRMERAELEAVKQWIAIRQNRDELES*
JGIcombinedJ26739_1002517453	3300002245	Forest Soil	MPALEKMSIEELEDLAAKLRHAIARNPENSRMEQVELEDVKQWIAIRQNRDELKSES*
JGI25385J37094_102140222	3300002558	Grasslands Soil	MASLDKMSLVELEELAARLRHVIARNPDNSRMEQIELDNVKQWIAIRQNRDELES
Ga0066680_100074284	3300005174	Soil	MASLDKMSLVELEELAARLRHVIARNPDNSRMEQIELDNVKQWIAIRQNRDELESKT*
Ga0070730_109243382	3300005537	Surface Soil	MAALDKMSVTELEDLAAKLRHAIARNPENSRMEQVELEDVKQWIAIRQNRDSSESEP*
Ga0070733_110171622	3300005541	Surface Soil	MAALDKMSLVELEDLAAKLRHSIARDPENSRMEQIELDNVKQWIAIRQNREELKSES*
Ga0066704_104457662	3300005557	Soil	GKMSDMVDLEKMSSTELEEIATKLRHAIARNPEHSRMEQVELEDVKQWTAIRQNRDSESEP*
Ga0066700_105442121	3300005559	Soil	MASLDKMSLVELEELAARLRHAIARNPDNSRMEQIELDNVKQWIAIR
Ga0066703_105588081	3300005568	Soil	AMASLDKMSLVELEELAAKLRHAIARNPDNSRMEQIELDNVKQWIAIRQNRDEPESKT*
Ga0070762_102783422	3300005602	Soil	MAYDTRGKMSGMADFEKMSLMELEEIATKLRHAIARNPEHSRMEQVELEDVKQWIAIRQNTDSESES*
Ga0070762_112669391	3300005602	Soil	MAALEKMSLEELEDLAAKLRHAIARNPENSRMEQLELEDVKQWIAIRQNRDELKSEP*
Ga0070766_107060391	3300005921	Soil	MAALEKMCVEELDDLAAKLRHAIARNPENSRMEQLELEDVKQWIAIRQNRDELKSEP*
Ga0075018_108449732	3300006172	Watersheds	DKQCTSMPALEKMSIEELEDLAAKLRHAIARNPENSRMEQVELEDVKQWIAIRQNRDELKSES*
Ga0070765_1006810221	3300006176	Soil	MTALDKMSLAQLEDLAAKLRHEIARNPENARTEQISLEDVKQWIAIHQDRDQLESEP*
Ga0070765_1010126671	3300006176	Soil	YDTRGKMSGMADFEKMSLMELEEIATKLRHAIARNPEHSRMEQVELEDVKQWIAIRQNTDSESES*
Ga0070765_1022997921	3300006176	Soil	MAALEKMSVEELDDLAAKLRHAIARNPENSRMEQLELEDVKQWIAIRQNRDELKSEP*
Ga0099791_100499562	3300007255	Vadose Zone Soil	MSDMVDLEKMSSTQLEEIASKLRHAIARNPEHSRMEQVELEDVKQWIAIRQNRDSESEP*
Ga0099793_102484002	3300007258	Vadose Zone Soil	MMKATAARNKMSLSELEELAAKLRHTIARNPGHSRMEQVELEDVKQWIAIRQNRDSSESES*
Ga0099829_102189763	3300009038	Vadose Zone Soil	MLDMADLEKMSLTELEEIATKLRHAIARNPEQSRMEQVELEDVKQWIAIRQNRDSESEP*
Ga0099830_104498332	3300009088	Vadose Zone Soil	MAALDKMNLTELEDLAAKLRHMIARNPEHSRIEQVELEDVMQWIAIRQGRDSSESEPSL*
Ga0099830_107676952	3300009088	Vadose Zone Soil	MADLEKMSLTELEEIATKLRHAIARNPEQSRMEQVELEDVKQWIAIRQNRDSESEP*
Ga0099830_114485641	3300009088	Vadose Zone Soil	MKTMATLDTMSLTELEDLAAKLRHTIARNPEHSRMEQVELEDVKQWIAIRQNRDNSDSEP
Ga0099828_118234962	3300009089	Vadose Zone Soil	MKTMATLGKMSLTELEDLAAKLRHTIARKPEHSRMEQVELEDVKQWIAIRQNRDSESEP*
Ga0099827_100810993	3300009090	Vadose Zone Soil	MAALDKMNLTELEDLAARLRHMIARNPGHSRMDQVELEDVMQWIAIRQGRDSSESEP*
Ga0099827_112794291	3300009090	Vadose Zone Soil	MASLDKMSLVELEELAARLRHAIARNPDNSRMEQIELDNVKQWIAIRQNRDEPESKT*
Ga0099827_114856571	3300009090	Vadose Zone Soil	ERMSLLGLEEIAAKLRHAIARNPEHSRMEQVELEGVKQWIAIRQNQESDSEP*
Ga0099792_100573172	3300009143	Vadose Zone Soil	LKAVPALDKMSLKELEELAAKLRHTIARNPEHSRREQVELEDVQQWIAIRQNRDSSESEP
Ga0099792_108310772	3300009143	Vadose Zone Soil	MAALEKMNLTELEDLAARLRHMIARNPGHSRMEQVELEDVMQWIAIRQGRDSSESEPLL*
Ga0116134_13510181	3300009764	Peatland	MKAMAALDKMSLTELEDLAAKLRHTIARNPGPSRTEQVELEDVKQWIAIRQNRDSSSAR*
Ga0136449_1017207011	3300010379	Peatlands Soil	MPALNQLSLVELEELAAKLRHAIARNPEDSRMEQRELEDVRQWIAIRQQNREEFNSER*
Ga0137392_103407561	3300011269	Vadose Zone Soil	LEDLAARLRHMIAPNPGHSRMEQVELEDVMQWIAIRQGRDSSESEPSL*
Ga0137391_100062978	3300011270	Vadose Zone Soil	MAALDKMNLTELEDLAARLRHMIARNPGHSRMEQVELEDVMQWIAIRQGRDSSESEP*
Ga0137391_111399651	3300011270	Vadose Zone Soil	MKTMATLDTMSLTEFEDLAANLRPTIARNPEHSRMEQIELEDVKQWIAIRQNRDNSDSEP
Ga0137393_101799992	3300011271	Vadose Zone Soil	MAALDKMNLTELEDLAAKLRHMIARNPGHSRMEQVELEDVMQWIAIRQGRDSSESEP*
Ga0137393_111609153	3300011271	Vadose Zone Soil	MADLEKMSLTELEEIATKLRHAIARNPENSRMEQVELEDVKQWMAIRQNRDS
Ga0137389_101673933	3300012096	Vadose Zone Soil	MADLEKMSLTELEEIATKLRHAIARDPEHSRMEQVELEDVKQWIAIRQNRDSESEP*
Ga0137389_104481503	3300012096	Vadose Zone Soil	MKTMATLGKMSLTELEDLAAKLQHAIARNPEQSRTEQVELEDVKQWIAIRQNRDSESEP*
Ga0137383_101862211	3300012199	Vadose Zone Soil	MAALDKMNLTELEDLAAKLPHMIARNPGHSRMEQVEVKDVMQWIAIRQGRDSSESEPLL*
Ga0137383_108444322	3300012199	Vadose Zone Soil	MTTLDKMSLVELEDLAAKLRRAIARNPEHSRKEQVELEDVKQWIAIRQNRDAESEP*
Ga0137382_101195801	3300012200	Vadose Zone Soil	MTTLDKMSLVELEDLAAKLRRAIARNPEHSRKEQVELEDVKQWIAIRQNRDAESEP
Ga0137382_101428042	3300012200	Vadose Zone Soil	MIKAMPALDKMSLTELEELAAKLRHTISRNPEHSRMEQVELEDVQQWIAIRQNRDSSDSEP*
Ga0137382_102449722	3300012200	Vadose Zone Soil	MMKATAALDKMSLAELEDLAAKLRHTIARKPGHSRMAQVELEEVKQWIAIRQNRDNSESQP*
Ga0137363_104194591	3300012202	Vadose Zone Soil	MKAVPALDKMSLTELEELAAKLRHTIARNPEHSRREQVELEDVQQWIAIRQNRDSCESEP
Ga0137363_118024241	3300012202	Vadose Zone Soil	IRVMMKATAARNKMSLSELEELTAKLRHTIARNPGHSRMEQVELEDVKQWIAIRQNRDSSESES*
Ga0137399_111854361	3300012203	Vadose Zone Soil	MMKATAARNKMSLSELEELTAKLRHTIARNPGHSRMEQVELEDVKQWIAIRQNRDSSESES*
Ga0137362_110608462	3300012205	Vadose Zone Soil	MAGLEKMSLTELEEIASKLRHAIARNPEHARMERDELEDVKQWIAIRQNRDSSESES*
Ga0137380_1000297911	3300012206	Vadose Zone Soil	MNLTELEDLAAKLRHMIARNPGHSRMEQVELEDVMQWIAIRQGRDSSESEP*
Ga0137380_104352352	3300012206	Vadose Zone Soil	MRLAELEDLAAKLRHAIARNPENSRMGQVELEDVKQWIAIRQNRDSSVSEP*
Ga0137381_100172314	3300012207	Vadose Zone Soil	MAALNKMSLGELEDLAAKLRHAIARHPENSRMEQVELEDVKQWIAIRQNRDELESEP*
Ga0137381_101142894	3300012207	Vadose Zone Soil	MAALDKMNLTELEDLAARLRHMIARNPGHSRMEQVEVKDVMQWIAIRQGRDSSESEPLL*
Ga0137379_100825194	3300012209	Vadose Zone Soil	MRLAELEDLAAKLRHAIARNPENSRMGHVELEDVKQWIAIRQNRDSSVSEP*
Ga0137378_103197471	3300012210	Vadose Zone Soil	MSEMVGLEKMSLTELEEIATKLRHAIARNPVYSRMEQVELED
Ga0137385_103025681	3300012359	Vadose Zone Soil	MAALDKMNLTELEDLAAKLPHMIARNPGHSRMEQVEVKDVMQWIAIRQGRDSSESEP*
Ga0137360_110728191	3300012361	Vadose Zone Soil	MMKATAARNKMSLSELEELAAKLRHTIARNPEHSRMEQVELEDVQQWIAIRQNRDSSESEP*
Ga0137361_107662942	3300012362	Vadose Zone Soil	MSDMAGLEKMSSTELEEIATKLRHAIARNPEHSRMEQVELEDVKQWIAVRQNRGFRVRAVVCLKV
Ga0137390_1000237510	3300012363	Vadose Zone Soil	MAALDKMNLTELEDLAARLRHMIAPNPGHSRMEQVELEDVMQWIAIRQGRDSSESEPLL*
Ga0137390_107458012	3300012363	Vadose Zone Soil	MKTMAALDKMSLTELEDLAAKLRHTIARNPGHSRMEQVELEDVKQWIAIRQNRDRSESEP
Ga0137390_108314152	3300012363	Vadose Zone Soil	MAELEKMSLTELEEIATKLRHAIARNPEHSRIEQVELEDVKQ*
Ga0137390_116008182	3300012363	Vadose Zone Soil	MKTMATLGKMSLTELEDLAAKLRHTIARNPEHSRMDQVELEDVKQWIAIRQNRD
Ga0137398_110847372	3300012683	Vadose Zone Soil	IRVMIKAMPALDKMSLTELEELAAKLRHTIARNPGHSRMEQVELEDVKQWIAIRQNRDSSESES*
Ga0137397_102192182	3300012685	Vadose Zone Soil	MSDMAGLEKMSSTELEEIATKLRHAIARNPEHSRMEQVEMEDVKQWIAIRQNRDSESEP*
Ga0137395_100682044	3300012917	Vadose Zone Soil	MADLEKMSLTELEEIATKLRHAIARNPEQSRMEQVELEDVKQWIAIRQN
Ga0137395_101387584	3300012917	Vadose Zone Soil	LTELEEIATKLRHAIARNPEQSRMEQVELEDVKQWIAIRQNRDSESEP*
Ga0137395_101677202	3300012917	Vadose Zone Soil	MAALEKMNLTELEDLAARLRHMIARNPGHSRMEQVELEDVMQWIAIRQGRDSSESEPSL*
Ga0137395_108989152	3300012917	Vadose Zone Soil	LTELEEIATKLRHAIARNPEQSRMEQVELEDVKQWIAIRQNRDAESEP*
Ga0137395_109930001	3300012917	Vadose Zone Soil	MKTMATLDTMSLTELEDLAAKLQHAIARNPEQSRMEQVELEDVKQWIAIRQN
Ga0137394_105094122	3300012922	Vadose Zone Soil	MIKAMPALDKMSLTELEELAAKLRHTIARDPEHSRMEHVELEDVQQWIAIRQSRDSSESEP*
Ga0137413_106569502	3300012924	Vadose Zone Soil	MSDMVDLEKMSSTQLEEIASKLRHAIARNPEHSRMEQFELEDLKQWIAIRQNRDSESEP
Ga0137416_108414891	3300012927	Vadose Zone Soil	MKAVPALDKMSLTELEELAAKLRHTIARNPEHSRIVQVELEDVQQWIAIRQNRDSSESEP
Ga0137410_117406722	3300012944	Vadose Zone Soil	MSDMVDLEKMSLTELEETATKLRHAIARNPEHSRMEQFELEDVKQWIAIRQNRDSESEP*
Ga0181524_102316762	3300014155	Bog	MKPMAALDKMSVTELEDLAAKLRHTIARNPGPSRMEQVELEDVKQWIAIRQNRDSSESEP
Ga0181518_104014311	3300014156	Bog	MSALDKMSLTELEDLAAKLRHAIVRNPENSRMAEIELEDVKQWIAIRENCKRHV*
Ga0181530_103640171	3300014159	Bog	MSALDKMSLTELEDLAAKLRHAIVRNPENSRMAEIELEDVKQWIAIRENSESERQF*
Ga0181532_107429502	3300014164	Bog	MKAMATLDKMSLTELEDLAAKLRHTIARNPEDSRMERVELEDVKQWIAIREDGDNS*
Ga0181526_106885601	3300014200	Bog	MTVLDKMSLAELEDLAAKLRHTIARNPEDSRMERVELEDVKQWIAIREDGDNS*
Ga0182015_100590105	3300014495	Palsa	MDQPIYFPRHLLDTQLKVKAMAALDKMSLMELEDLAAKLRHMIARKPGDSRIEEIELEDIKQWIAIRQSCQSEPQF*
Ga0182015_100688664	3300014495	Palsa	MPALNKLSLVELEALAAKLRHAIARTPEDSRMEQLELEDVKQWIAIRRNRGEFNSER*
Ga0182024_102367741	3300014501	Permafrost	MPALNKLSLVELEALAAKLRHAIARNPEDSRMEQLELEDVKQWIAIRGNRDEFNAER*
Ga0182024_104102231	3300014501	Permafrost	MKAMAALDKMSLMELEDLAAKLRHAIARNPGNSRMEEIELEDVKQWIAIRQSCESEPQL*
Ga0182024_106301292	3300014501	Permafrost	MSDMADFEKMSLMELEGIATKLRHAIARNPEHSRMEQVELEDVKQWIAIRQNRDSESEP*
Ga0182024_107359351	3300014501	Permafrost	NQLKMKAMAALDKMSLMELEDLAAKLRHTIARNPCNSRMEEIELEDVKQWIAIRQSCQSEPQF*
Ga0182030_112643872	3300014838	Bog	MAALDKMSLMELEDLAAKLRHMIARKPGDSRIEEIELEDIKQWIAIRENSEHEPRF*
Ga0137420_10962961	3300015054	Vadose Zone Soil	MIKAMPALDKMSLTELEELAAKLRHTIARNPEHSRMEQVELEDVQQWIAIRQNRDSSESEP*
Ga0137420_11512013	3300015054	Vadose Zone Soil	MSDMADLEKMSSTELEEIATKLRHAIARNPEHSRMEQAEMEDVK
Ga0137420_12374992	3300015054	Vadose Zone Soil	MIKAMAALDKMSLTELEELAAKLRHTIARNPEHSRMVQVELEDVQQWIAIRQNRDSSESEP*
Ga0137420_14825682	3300015054	Vadose Zone Soil	MIKAMPALDKMSLTELEELAAKLRHTIARNPEHSRIVQVELEDVQQWIAIRQNRDSSESEP*
Ga0137403_110262952	3300015264	Vadose Zone Soil	MSDMVDLEKMSSTELEEIATRLRHAIARNPEHSRMEQVELLDVKQWIPIRQSRDSESEP*
Ga0187812_10004573	3300017821	Freshwater Sediment	MAALDKMSLAELEDLAAKLRHAIARYPETSRMQQIELENVKQWIVIRQNRDQIESVS
Ga0187802_100735592	3300017822	Freshwater Sediment	MSALNKLSLLELEELAAKLRHAIARNPEDSRMEQLELEDVKQWIAIRENGEEFTSER
Ga0187818_102835701	3300017823	Freshwater Sediment	MKAMAALDKMTLTELEDLAARLRHTIARNPGNSRMEQVELEDVKQWIAIRQSRDSSASEH
Ga0187818_103712662	3300017823	Freshwater Sediment	MAALDKMSLAELEDLAAKLRHAIARNPETSRMQQIELENVKQWIVIRQNRDQIESVS
Ga0187824_101639133	3300017927	Freshwater Sediment	MASVDKMSLVELEELAAKLRHAIARNPEDCKMEQVELDNVKQWIAIRQSKDEVESEP
Ga0187825_101835862	3300017930	Freshwater Sediment	MPALNKLSLLELEELAAKLRHTIARNPEDSRAEQLELEDVKQWIAIRQNRDDLDSES
Ga0187801_100594381	3300017933	Freshwater Sediment	MKVMAALDKMTLTELEDLAAKLRHTIARNPGHSRTEQVELEDVKQWIAIRQNRDNSESEP
Ga0187803_1000050520	3300017934	Freshwater Sediment	MKVMAALDKMTLTELEDLAARLRHTIARNPGNSRMEQVELEDVKQWIAIRQNRDNSESEP
Ga0187803_100350373	3300017934	Freshwater Sediment	MKIMAALDKMNLTELEDLAAKLRHTIARNPAHSRMEQVELEDVKQWIAIRQSRDSSASEH
Ga0187803_103396452	3300017934	Freshwater Sediment	MATPDKMRLSELEDLATKLRHAIARNPDHSRMEPVALENVKQWLAIR
Ga0187821_103684351	3300017936	Freshwater Sediment	MAPLDKMSLVELEDLAVKLRHTIARDPANSPMEQIELDNVKQWIAIRQNREELKSES
Ga0187819_101728022	3300017943	Freshwater Sediment	MPALNKLSLLELEELAAKLRHAIARNPEDSRMEQLELEDVKQWIAIRENGEEFTSER
Ga0187819_103194002	3300017943	Freshwater Sediment	MLARNILSLVELEALAAKLRHAIARNPEDSRMEQLELEDVKQWIAIRRNRDEFNSER
Ga0187819_105925632	3300017943	Freshwater Sediment	MPAPNKMSLVELEELATKLRHAIARNPENSRVEQLELEDVKQWIAIRQNRDKLKSEP
Ga0187817_101836751	3300017955	Freshwater Sediment	MPALNKLSLLELEELAAKLRHAIARNPEDSRMEQLELEDVKQWIAI
Ga0187817_103313371	3300017955	Freshwater Sediment	MPALNKLSLLELEELAAKLRHAIARNPEDSRMEQLELEDVKQWIAIRQNGEEFASER
Ga0187817_110914541	3300017955	Freshwater Sediment	MAALDKMSLTELEDLAAKLRHTIARNPGNSRMEQVELEDVKQWIAIRQNRDNSESEP
Ga0187816_103904431	3300017995	Freshwater Sediment	MLARNILSLVELEALAAKLRHAIARNPEDSRMEQLELEDVKQWIAIRRNGDEFNSER
Ga0187804_101984902	3300018006	Freshwater Sediment	MLARNILSLVELEALAAKLRHAIARSPEDSRMEQRELEDVKQWIAIRRNRDEFNFER
Ga0187804_102252742	3300018006	Freshwater Sediment	MSALNKLSLLELEELAAKLRHAIARNPEDSRMEQLELEDVKQWIAIRQNGEEFASER
Ga0187804_102557341	3300018006	Freshwater Sediment	MAALDKMSLAELEDLAAKLRHAITHYPETSRMQQIELENVKQWIVIRQNRDQIESVS
Ga0187804_103044142	3300018006	Freshwater Sediment	VRNIRVKIKAMTSLDKMTLTELEDLAAKLRHTIARNPGHSRTEQVELEDVKQWIAIRQNRDNSESEP
Ga0187805_102357372	3300018007	Freshwater Sediment	LPFGIKMRLMTALDKMSLVELEEFAAKLRHAIARNPENSRMEQIELDNVKQWIAIRQNRDEFESEP
Ga0187810_101322762	3300018012	Freshwater Sediment	MSALNKLSLLELEELAAKLRHAIARNPEDSRMEQLELEDVKQWIAIRQNGEEFTSER
Ga0187810_103682751	3300018012	Freshwater Sediment	MAALDKMSLTELEDLAAKLRHTIARNPGHSRTEQVELEDVKQWIAIRQNRDTTESET
Ga0187810_103751202	3300018012	Freshwater Sediment	MAALDRMTLTELEDLAAKLRHTIARNPGHSRMEQVELEDVKQWIAIRQNRDNSESEP
Ga0187872_105001592	3300018017	Peatland	MKPMAALDKMSVTELEDLAAKLRHTIARNPGHSRMEQVELEDVKQWIAIRQNRDSSSAR
Ga0187864_100957693	3300018022	Peatland	MTSLDKMTLTELEDLAAKLRHTIARNPGHSRTEQVELEDVKQWIAIRQNRDNSESEP
Ga0187875_102654642	3300018035	Peatland	MKAMAALDKMSVTELEDLASKLRHTIARNPGHSRMEQVELEDVKQWIAIRQNRDSSDSEP
Ga0066662_102967903	3300018468	Grasslands Soil	MASLDKMSLVELEELAARLRHVIARNPDNSRMEQIELDNVKQWIAIRQNRDELESKT
Ga0187852_13916783	3300019082	Peatland	MKAMAALDKMSVTELEDLAAKLRHTIARNPGPSRTEQVELEDVKQWIAIRQNRDSS
Ga0179592_103536622	3300020199	Vadose Zone Soil	MSDMVDLEKMSSTELEEIATKLRHAIARNPEHSRMEQVELVDVKQWIAI
Ga0210399_113446322	3300020581	Soil	MTALDKLSRAQLEDLAAKLRHEIARNPENTRMEQLELEDVKQWIAIHQDREQLESEP
Ga0179596_104448922	3300021086	Vadose Zone Soil	MAALDKMNLTELEDLAARLRHMIARNPEHSRIEQVELEDVMQWIAIRQGRDSSESEP
Ga0210400_108233672	3300021170	Soil	MAYDTRGKMSGMADFEKMSLMELEEIATKLRHAIARNPEHSLMEQVELEDVKQWIAIRQNTDSESES
Ga0210408_101625203	3300021178	Soil	MAYDTRGKMSGMADFEKMSLMELEEIATKLRHAIARNPEHSRMEQVELEDVKQWIAIRQNTDSESES
Ga0210408_109260482	3300021178	Soil	MPALEKMSVEELEDLAAKLRHAIARNPENSRTEQVELEDVKQWIAIRQNRDELKPEP
Ga0210410_1000019629	3300021479	Soil	MKAMAALDKMSLTELEDLAAKLRHTIARNPGHSRMEQVKLEDVKQWIAIRQNGDSSESEP
Ga0210409_1000974510	3300021559	Soil	MAALEKMSLEELEDLAAKLRHAIARNPENSRMEQLELEDVKQWIAIRQNRDELKSEP
Ga0210409_101093922	3300021559	Soil	MTALDKMSLAQLEDLAAKLRHEIARNPENARTEQIELEDVKQWIAIHQDRNQLESEP
Ga0137417_13681594	3300024330	Vadose Zone Soil	MSDMAGLEKMSLTELEEIATKLRHAIARNPEQSRMEQVELEDVKQWIAIRQNRDSESEP
Ga0209471_10840242	3300026318	Soil	MLDLEKMSSTELEEIATKLRHAIARNPEHSRMEQVELVDVKQWIAIRQSRDSESEQ
Ga0209158_10115114	3300026333	Soil	MSLVELEELAARLRHVIARNPDNSRMEQIELDNVKQWIAIRQNRDELESKT
Ga0257176_10291901	3300026361	Soil	KMSDMVDLEKMSSTELEEIATKLRHAIARNPEHSRMEQVELVDVKQWIAIRQSRDSESEP
Ga0257176_10347061	3300026361	Soil	MSDMVDLEKMSSTELEEIATKLRHAIARNPEHSRMEQVELEDVKQWIAIRQN
Ga0257167_10106252	3300026376	Soil	MSDMVDLEKMSSTEEIATKLRHAIARNPEHSRMEQVELVDVKQWIAIRQNRDSSESEP
Ga0257181_10632281	3300026499	Soil	RDIRVMIKAMPALDKMSLKELEELAAKLRHTIARNPEHSRMEQVELQDVQQWIAIRQNRDSSESEP
Ga0209806_12356543	3300026529	Soil	MASLDKMSLVELEELAAKLRHAIARNPDNSRMEQIELDNVKQWIAIRQNRDEPESKT
Ga0209219_11669781	3300027565	Forest Soil	MLDMADLEKMSLLELEEVATKLRHAIARNPEHSRIEQVELEDVKQWIAIRQNRDSESEP
Ga0209076_11010892	3300027643	Vadose Zone Soil	MSDMAGLEKMSSTELEEIATKLRHAIARNPEHSRMEQVEMEDVKQWIAIRQSRDSESEP
Ga0208981_10296862	3300027669	Forest Soil	MSDMVDLEKMSSTELEEIATKLRHAIARNPEHSRMEQFELEDVKQWIAIRQNRDSESEP
Ga0209011_12235792	3300027678	Forest Soil	MSYMAGLEKMSLLELEEIATKLRHAIARNPEHSRIEQVELEDVKQW
Ga0209166_103461542	3300027857	Surface Soil	MAALDKMSVTELEDLAAKLRHAIARNPENSRMEQVELEDVKQWIAIRQNRDSSESEP
Ga0209701_100256142	3300027862	Vadose Zone Soil	MAALDKMNLTELEDLAAKLRHMIARNPEHSRIEQVELEDVMQWIAIRQGRDSSESEP
Ga0209701_101171233	3300027862	Vadose Zone Soil	MADLEKMSLTELEEIATKLRHAIARNPEQSRMEQVELEDVKQWIAIRQNRDSESEP
Ga0209283_106156051	3300027875	Vadose Zone Soil	MAALDKMNLTELEGLAARLRHMIARNPGHSRMEQVELEDVMQWIAIRQGRDSSESEP
Ga0209590_101831802	3300027882	Vadose Zone Soil	MAALDKMNLTELEDLAARLRHMIARNPGHSRMDQVELEDVMQWIAIRQGRDSSESEP
Ga0209415_107158291	3300027905	Peatlands Soil	MPALNKLSLLELEELAAKLRHAIARNPEDSRMEQLELEDVKQWIAIRQNGEEFTSE
Ga0209526_102617602	3300028047	Forest Soil	MAALEKMSVEELDDLAAKLRHAIARNPENSRMEQLELEDVKQWIAIRQNRDELKSES
Ga0209526_103923712	3300028047	Forest Soil	MADLEKMSLLELEEIATKLRHAIARNPEHSRIEQVELEDVKQWIAIRQNRDAESEP
Ga0137415_100196036	3300028536	Vadose Zone Soil	MSLVELEELAARLRHAIARNPDNSRMEQIELDNVKQWIAIRQNRDEPESKT
Ga0308309_112910712	3300028906	Soil	YDTRGKMSGMADFEKMSLMELEEIATKLRHAIARNPEHSRMEQVELEDVKQWIAIRQNTDSESES
Ga0222749_101658701	3300029636	Soil	MAYDTRGKMSGMADFEKMSLMELEEIATKLRHAIARNPEHSRMEQVELEDV
Ga0307374_100549826	3300031670	Soil	MAALDKMSLTELEDLAAKLRHTIARNPENSRMEQVEPEDVKQWIAIRQDRDEFESGL
Ga0307373_101848581	3300031672	Soil	GLNKMSLTELEDLAAKLRHTIARNPGHSRMEQVELEDVKQWIAIRQNGDSSKSEP
Ga0307373_102993262	3300031672	Soil	MAALDKMTLTELEDLAAKLRHTIARNPAHSRMEHVELEDVKQWIAIRQNRDNSESEP
Ga0307471_1018202032	3300032180	Hardwood Forest Soil	SLMELEEIATKLRHAIARNPEYSRMEQVELEDVKQWIAIRQNTDSESES
Ga0335085_1000012699	3300032770	Soil	MTSLDKMSLAELEDLAAKLRHAIARNPGHSRMEQVELEDVKQWIAIRQNRDSESEA
Ga0335085_110839242	3300032770	Soil	MPTLNKLSLLELEELAATLRHAIVRNPEDSRMEQLELEDVKQWIAIRQNRDEFNSKC
Ga0335085_115898342	3300032770	Soil	MPTLNKLGLLELEELAAKLRHAIARNPEDSRMEQLELEDVKQWIAIRENGDEFTSER
Ga0335081_111884011	3300032892	Soil	FRTSTLFRIESRSMTSLDKMSLAELEDLAAKLRHAIARNPEHSRMEQVELEDVKQWIAIRQNRDSESEP
Ga0335069_117125932	3300032893	Soil	MPTLNKLGLLELEELAAKLRHAIARNPEDSRMEQLELEDVKQWIAIRENGEEFTSER
Ga0335072_107912652	3300032898	Soil	MKAMATLDKMSLAELEDLAAKLRHVIARNPGHSRMEQIELDDVKQWIAIRQNRDSSESEP
Ga0335083_105398812	3300032954	Soil	MPTLNKLGLLELEELAAKLRHAIARNPEDSRMEQLELEDVKQWIAIRENGDKFTSER
Ga0335077_102866861	3300033158	Soil	MPALNKLSLLELEELAAKLRHAIARNPEDSRMKQLELEDVKQWIAIRQNGEEFASER
Ga0326728_1000072767	3300033402	Peat Soil	MVALDKMSLAELEDLAAKLRHTIARNPDHSRMEQVELEDVKQWIAIRQNRDNSESKLWL
Ga0326724_0205118_791_970	3300034091	Peat Soil	MKAMATLDKMSLTELEDLAAKLRHTIARNSGPSRTEQVELEDVKQWIAIRQNRDSSSAQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F039315

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences